Rh7DG457500
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
65078243 .. 65080479
2237 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG457500.1

Sequence Viewer

Length: 444 bp
ATGGAGAAGTATGAGGTTGTGAAAGATATTGGGTCTGGGAATTTTGGTGTAGCAAGGCTGGTCAGAGACAAGAATACCCAAGAACTCTTAGCTGTTAAGTTCATTGAGAGAGGCCTTAAGTCATTACTGAGTTCTCTGCCAAAGTCTACTGTGGGAACACCTGCTTATATTGCACCTGAAGTTCTATCTAAAAAACAATATGATGGACAGAGAATAACAATTCCAGAAATTAAGACCCACCGTTGGTTTGCAAAGAACTTACCTCTGGAAATGAAGGAAGGAGGAACTTGGGAGAATAATGCTGTAAACACACCATCCCAAAGCATTGAAGAAGTTCAGTCCATAATAAAAGAGGCAAGAAAACCTTTGAAGGTCCCAACTGTCAGTAGGCATTGCGTTGGAAGCAGCATGGCTATTGATGATGCTGATGTTGAAGGTACATAA

Protein Analysis

147

Amino Acids

16.28

Weight (kDa)

8.64

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000609)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 169
AccI GTMKAC 1 cut(s) 146
AcsI RAATTY 1 cut(s) 40
AcuI CTGAAG 1 cut(s) 198
AfaI GTAC 1 cut(s) 439
AfiI CCNNNNNNNGG 1 cut(s) 243
AflII CTTAAG 1 cut(s) 116
AgsI TTSAA 3 cut(s) 329, 370, 434
AluBI AGCT 1 cut(s) 92
AluI AGCT 1 cut(s) 92
Alw26I GTCTC 1 cut(s) 60
AoxI GGCC 1 cut(s) 112
ApeKI GCWGC 1 cut(s) 405
ApoI RAATTY 1 cut(s) 40
Asp700I GAANNNNTTC 1 cut(s) 333
AspS9I GGNCC 1 cut(s) 373
AvaII GGWCC 1 cut(s) 373
BbvI GCAGC 1 cut(s) 417
BccI CCATC 2 cut(s) 197, 322
BcoDI GTCTC 1 cut(s) 60
BfrI CTTAAG 1 cut(s) 116
BfuAI ACCTGC 1 cut(s) 169
BisI GCNGC 1 cut(s) 406
BlsI GCNGC 1 cut(s) 407
Bme18I GGWCC 1 cut(s) 373
BmgT120I GGNCC 1 cut(s) 373
BmiI GGNNCC 1 cut(s) 375
BmsI GCATC 1 cut(s) 412
Bsc4I CCNNNNNNNGG 1 cut(s) 243
Bse3DI GCAATG 1 cut(s) 391
BseGI GGATG 1 cut(s) 314
BseLI CCNNNNNNNGG 1 cut(s) 243
BseMI GCAATG 1 cut(s) 391
BseMII CTCAG 1 cut(s) 119
BseXI GCAGC 1 cut(s) 417
BshFI GGCC 1 cut(s) 114
BslFI GGGAC 1 cut(s) 359
BslI CCNNNNNNNGG 1 cut(s) 243
BsmAI GTCTC 1 cut(s) 60
BsmFI GGGAC 1 cut(s) 359
BsnI GGCC 1 cut(s) 114
BspANI GGCC 1 cut(s) 114
BspCNI CTCAG 1 cut(s) 120
BspLI GGNNCC 1 cut(s) 375
BspMI ACCTGC 1 cut(s) 169
BspTI CTTAAG 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 391
Bst4CI ACNGT 3 cut(s) 151, 242, 382
BstAFI CTTAAG 1 cut(s) 116
BstDEI CTNAG 2 cut(s) 88, 128
BstF5I GGATG 1 cut(s) 314
BstMAI GTCTC 1 cut(s) 60
BstMWI GCNNNNNNNGC 2 cut(s) 170, 402
BstV1I GCAGC 1 cut(s) 417
BsuRI GGCC 1 cut(s) 114
BtsCI GGATG 1 cut(s) 314
BveI ACCTGC 1 cut(s) 169
Cfr13I GGNCC 1 cut(s) 373
Csp6I GTAC 1 cut(s) 438
CviAII CATG 1 cut(s) 409
CviJI RGCY 4 cut(s) 58, 92, 114, 413
CviKI_1 RGCY 4 cut(s) 58, 92, 114, 413
CviQI GTAC 1 cut(s) 438
DdeI CTNAG 2 cut(s) 88, 128
Eco147I AGGCCT 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 373
Eco57I CTGAAG 1 cut(s) 198
EcoO109I RGGNCCY 1 cut(s) 373
FaeI CATG 1 cut(s) 412
FaiI YATR 6 cut(s) 12, 168, 201, 344, 410, 442
FalI AAGNNNNNCTT 2 cut(s) 349, 381
FaqI GGGAC 1 cut(s) 359
FatI CATG 1 cut(s) 408
FblI GTMKAC 1 cut(s) 146
Fnu4HI GCNGC 1 cut(s) 406
FokI GGATG 1 cut(s) 301
Fsp4HI GCNGC 1 cut(s) 406
GluI GCNGC 1 cut(s) 406
HaeIII GGCC 1 cut(s) 114
Hin1II CATG 1 cut(s) 412
Hpy166II GTNNAC 2 cut(s) 147, 307
Hpy188I TCNGA 1 cut(s) 65
Hpy188III TCNNGA 2 cut(s) 224, 266
Hpy8I GTNNAC 2 cut(s) 147, 307
HpyAV CCTTC 4 cut(s) 268, 272, 364, 428
HpyCH4III ACNGT 3 cut(s) 151, 242, 382
HpyCH4V TGCA 2 cut(s) 173, 251
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 402
HpyF3I CTNAG 2 cut(s) 88, 128
Hsp92II CATG 1 cut(s) 412
LpnPI CCDG 6 cut(s) 21, 44, 174, 189, 237, 251
Lsp1109I GCAGC 1 cut(s) 417
LweI GCATC 1 cut(s) 412
MboII GAAGA 1 cut(s) 341
MluCI AATT 3 cut(s) 40, 219, 228
MmeI TCCRAC 1 cut(s) 379
MnlI CCTC 5 cut(s) 7, 104, 273, 275, 346
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 3 cut(s) 96, 117, 231
MspCI CTTAAG 1 cut(s) 116
MwoI GCNNNNNNNGC 2 cut(s) 170, 402
NlaIII CATG 1 cut(s) 412
NlaIV GGNNCC 1 cut(s) 375
PaqCI CACCTGC 1 cut(s) 169
PceI AGGCCT 1 cut(s) 114
PdmI GAANNNNTTC 1 cut(s) 333
PkrI GCNGC 1 cut(s) 407
PpuMI RGGWCCY 1 cut(s) 373
Psp5II RGGWCCY 1 cut(s) 373
PspN4I GGNNCC 1 cut(s) 375
PspPI GGNCC 1 cut(s) 373
PspPPI RGGWCCY 1 cut(s) 373
RsaI GTAC 1 cut(s) 439
RsaNI GTAC 1 cut(s) 438
SaqAI TTAA 3 cut(s) 96, 117, 231
SatI GCNGC 1 cut(s) 406
Sau96I GGNCC 1 cut(s) 373
SetI ASST 8 cut(s) 18, 94, 163, 178, 265, 367, 375, 439
SfaNI GCATC 1 cut(s) 412
SinI GGWCC 1 cut(s) 373
SmlI CTYRAG 1 cut(s) 116
SmoI CTYRAG 1 cut(s) 116
Sse9I AATT 3 cut(s) 40, 219, 228
SseBI AGGCCT 1 cut(s) 114
StuI AGGCCT 1 cut(s) 114
TaaI ACNGT 3 cut(s) 151, 242, 382
TasI AATT 3 cut(s) 40, 219, 228
Tru1I TTAA 3 cut(s) 96, 117, 231
Tru9I TTAA 3 cut(s) 96, 117, 231
TseI GCWGC 1 cut(s) 405
TspDTI ATGAA 2 cut(s) 91, 287
Vha464I CTTAAG 1 cut(s) 116
VpaK11BI GGWCC 1 cut(s) 373
XapI RAATTY 1 cut(s) 40
XmiI GTMKAC 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.