RLG00000002887

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
41222219 .. 41225167
2949 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002887

Sequence Viewer

Length: 453 bp
ATGGTGGTGGTGATAGCGACGACTTCAATTGAGTTGATAATTGGGTTTTTGGTGGTGCTGTGGCGGAGATCGAACTGTGTGAATCAGAGGACCACAAATGAAAGCTTGGAGAGAATAAAGGGTGATTGGAACACTGCATTGTATTCTAAGCGGATCAAAAGTGAAACGAAACTGAAAAGCATTGGAGTTTCAAGCTCTTTTAAGATGTTTAATTTTTCCATGGATTCATTCCTTCAAGCAATGGGAGGGAACAGAGGAAGTGCAGATAGAGATCGAGGATTTGAGAGGGAACTTGAAGCAATGGGAGCTATAAAGCACCGGAACATCGTGACTCTTAATGGTGTCACCCTTTTGCTTCTCCTTGCTCTGCAGAGTTATGGGTTCGTTCTTTCTTTTAAGGTTTCACCTGCTACTACTATTATTGCTGCAACTGATTTATCTGTTGTGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

151

Amino Acids

16.62

Weight (kDa)

9.92

Isoelectric Point (pI)

31.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 415
Acc36I ACCTGC 1 cut(s) 415
AciI CCGC 2 cut(s) 64, 151
AclWI GGATC 1 cut(s) 161
AgsI TTSAA 4 cut(s) 27, 192, 236, 296
AluBI AGCT 3 cut(s) 105, 195, 308
AluI AGCT 3 cut(s) 105, 195, 308
AlwI GGATC 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 425
AspS9I GGNCC 1 cut(s) 90
AsuHPI GGTGA 4 cut(s) 22, 134, 337, 396
AvaII GGWCC 1 cut(s) 90
BbvI GCAGC 1 cut(s) 412
BfmI CTRYAG 1 cut(s) 368
BfuAI ACCTGC 1 cut(s) 415
BisI GCNGC 1 cut(s) 426
BlsI GCNGC 1 cut(s) 427
Bme18I GGWCC 1 cut(s) 90
BmgT120I GGNCC 1 cut(s) 90
BsaBI GATNNNNATC 1 cut(s) 270
BsaJI CCNNGG 1 cut(s) 219
BsaWI WCCGGW 1 cut(s) 318
Bse3DI GCAATG 2 cut(s) 246, 306
Bse8I GATNNNNATC 1 cut(s) 270
BseDI CCNNGG 1 cut(s) 219
BseJI GATNNNNATC 1 cut(s) 270
BseMI GCAATG 2 cut(s) 246, 306
BseXI GCAGC 1 cut(s) 412
BsgI GTGCAG 1 cut(s) 282
BsiSI CCGG 1 cut(s) 319
Bsp143I GATC 3 cut(s) 68, 153, 271
Bsp19I CCATGG 1 cut(s) 219
BspACI CCGC 2 cut(s) 64, 151
BspMAI CTGCAG 1 cut(s) 372
BspMI ACCTGC 1 cut(s) 415
BspPI GGATC 1 cut(s) 161
BsrDI GCAATG 2 cut(s) 246, 306
BssECI CCNNGG 1 cut(s) 219
BssMI GATC 3 cut(s) 68, 153, 271
BssT1I CCWWGG 1 cut(s) 219
Bst4CI ACNGT 1 cut(s) 77
BstDEI CTNAG 1 cut(s) 147
BstDSI CCRYGG 1 cut(s) 219
BstKTI GATC 3 cut(s) 71, 156, 274
BstMBI GATC 3 cut(s) 68, 153, 271
BstMWI GCNNNNNNNGC 1 cut(s) 305
BstSFI CTRYAG 1 cut(s) 368
BstV1I GCAGC 1 cut(s) 412
BtgI CCRYGG 1 cut(s) 219
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 1 cut(s) 132
BveI ACCTGC 1 cut(s) 415
Cfr13I GGNCC 1 cut(s) 90
CviAII CATG 1 cut(s) 220
CviJI RGCY 3 cut(s) 105, 195, 308
CviKI_1 RGCY 3 cut(s) 105, 195, 308
DdeI CTNAG 1 cut(s) 147
DpnI GATC 3 cut(s) 70, 155, 273
DpnII GATC 3 cut(s) 68, 153, 271
EciI GGCGGA 1 cut(s) 79
Eco130I CCWWGG 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 90
EcoT14I CCWWGG 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 219
FaeI CATG 1 cut(s) 223
FaiI YATR 3 cut(s) 221, 311, 378
FatI CATG 1 cut(s) 219
Fnu4HI GCNGC 1 cut(s) 426
Fsp4HI GCNGC 1 cut(s) 426
GluI GCNGC 1 cut(s) 426
HapII CCGG 1 cut(s) 319
Hin1II CATG 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 103
HinfI GANTC 3 cut(s) 82, 224, 331
HpaII CCGG 1 cut(s) 319
HphI GGTGA 4 cut(s) 22, 134, 337, 396
Hpy188I TCNGA 1 cut(s) 87
Hpy188III TCNNGA 1 cut(s) 328
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 1 cut(s) 242
HpyCH4III ACNGT 1 cut(s) 77
HpyCH4V TGCA 4 cut(s) 137, 263, 370, 428
HpyF10VI GCNNNNNNNGC 1 cut(s) 305
HpyF3I CTNAG 1 cut(s) 147
Hsp92II CATG 1 cut(s) 223
Kzo9I GATC 3 cut(s) 68, 153, 271
LmnI GCTCC 1 cut(s) 305
LpnPI CCDG 2 cut(s) 332, 420
Lsp1109I GCAGC 1 cut(s) 412
MaeIII GTNAC 2 cut(s) 328, 343
MalI GATC 3 cut(s) 70, 155, 273
MboI GATC 3 cut(s) 68, 153, 271
MfeI CAATTG 1 cut(s) 27
MluCI AATT 3 cut(s) 27, 39, 211
MlyI GAGTC 1 cut(s) 325
MnlI CCTC 5 cut(s) 81, 239, 248, 269, 279
MseI TTAA 4 cut(s) 201, 210, 336, 396
MspI CCGG 1 cut(s) 319
MunI CAATTG 1 cut(s) 27
MwoI GCNNNNNNNGC 1 cut(s) 305
NcoI CCATGG 1 cut(s) 219
NdeII GATC 3 cut(s) 68, 153, 271
NlaIII CATG 1 cut(s) 223
NmuCI GTSAC 2 cut(s) 328, 343
PaqCI CACCTGC 1 cut(s) 415
PfeI GAWTC 2 cut(s) 82, 224
PkrI GCNGC 1 cut(s) 427
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
PspPI GGNCC 1 cut(s) 90
PstI CTGCAG 1 cut(s) 372
SaqAI TTAA 4 cut(s) 201, 210, 336, 396
SatI GCNGC 1 cut(s) 426
Sau3AI GATC 3 cut(s) 68, 153, 271
Sau96I GGNCC 1 cut(s) 90
SchI GAGTC 1 cut(s) 325
SetI ASST 5 cut(s) 107, 197, 310, 402, 409
SfcI CTRYAG 1 cut(s) 368
SinI GGWCC 1 cut(s) 90
Sse9I AATT 3 cut(s) 27, 39, 211
SsiI CCGC 2 cut(s) 64, 151
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 1 cut(s) 77
TaqI TCGA 2 cut(s) 71, 274
TasI AATT 3 cut(s) 27, 39, 211
TfiI GAWTC 2 cut(s) 82, 224
Tru1I TTAA 4 cut(s) 201, 210, 336, 396
Tru9I TTAA 4 cut(s) 201, 210, 336, 396
TscAI CASTG 1 cut(s) 139
TseFI GTSAC 2 cut(s) 328, 343
TseI GCWGC 1 cut(s) 425
Tsp45I GTSAC 2 cut(s) 328, 343
TspDTI ATGAA 2 cut(s) 114, 216
TspRI CASTG 1 cut(s) 139
VpaK11BI GGWCC 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.