Rorug05G0273800

belongs to the flavoprotein pyridine nucleotide cytochrome reductase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
30917570 .. 30920587
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0273800.1

Sequence Viewer

Length: 3018 bp
ATGTCTGATTCTCCAACCATGCATATGCATGCAGAGAGCATGCTTGATGATCCCAGCACTAGGCTCCTTAATGATAAACCCAAAAACAAATGGCGTATTGCTGTTTCCACCATCTTCTGCATTCGAGCCCTCCTCTCTTTACTCAACCAAATCACAAAAACCAACTTCATAACATCTAGCTCTCCGGTCTCTTCCAATAGTACTTTCAATGTGGACCAAATAGCTCTCACTCGGCTTGTGAAGAACAAAGATCTTGCTCAACTGCAAGAGTTGGGAGGGGTTGAAGGAGTAGCATTACATCTCAAATCTGATAAAGAGCATGGAATTCCTTGCCATGATGCTGAGGACATTCCCGACAGAATCAAAGAATTCGGTTCAAACGTTTACAGAAAAGCCCCCAAAGGAGGTTTTTTCCGTTTTGTGTGGGAAGCCTTCAAAGACCCAACAGTACTCATCCTCTTAGGCTGTGCGGCACTTTCTCTTGGTTTTGACATCAATGAACATGGATTCAAAGAAGGTTGTACTAATGGTGGAACCATATTGCTCGCAGTCATTCAAATCATTTCCGTGTCTGCAGTAAGCGATTACAGGCAGAGCAGACCTTTGGTGCGTAACAATATCCAAATTGAGGCGTGGAGAGGTGGCAGGAGGCAAAAGATTTCTGTTTCTGAAACTGTGGTTGGGGATGTAATTCTCTTGAATATTGGAGATCGGGTGCCGGCTGATGGATTACTTGTACAAGGCCATTCCTTGCAAGTAGACGAATCAAGCATGACAGGAACCGACAGCCCTGTTGAAATTAGCTACCATCAGAATCCCTTCCTTTTTTCTGGGACAAAAATCACACATGGATATGGTCGAATGCTTGTCACATCCGTTGGGATGAACACAACGTGGGGTGAGATGATGAGCCAAATGAGGCAAGACTCCAGTGAAAGGACACCCCTGCAAGAACGTCTGGAGAAGCTAAATTCGTTAATAGGTAAAGCAGCTTTGCTAGTTGCTTTCCTTCTTCTTGTAGTCTTGTTAGTTCGATACTTCACGGGGAATACCAAGGATGAGAATGGAAACAAGGAGTTCAATGGCAGCAACACAGAAGTAGATGACATAATAAGCGCTGTCATTGGGATTGTAGCGGCTGCGGTTTCCATTGTTGTGGTGGCAATTCCAGAAGGTCTCTCATTAGCACTAATTCTTGCTGTTGCCTATTCCAAGAAGATAATGATGGCTGACAAAGCAATGGATCTGAAGCTCTCTGCTTGTGAGACAATGGGATCTGTTACCACAATTTGCACTGACAAAACAGGTACTCTTACTATGAACCAGATGGAGGTGACCCAGTTTTGGTTAGGTAAATATTCTTTGGAAGAAGAAGCTTATTCATCAGAGATTTCTCTTTCTGTTCTTCATTTGATCCAAGAAGGAGTTGCTCTGAATACAACTGGTAGTGTGCACAAGCAAAGTTTGGATTCAAAAGTAGAAATCTCAGGCAGTCCAACTGAAAAGGCTATTATTTCATGGGGGGTATTTAAGTTGCAGATGGATATGGAGAAAGTAATGAAGAGTTGTAGCATTCTCCATGTTGAGGCCTTTGATTCGCAGAATATGCGAAGTGGGGTTTCAATGAAGAGGAACGCAGAAAACACAGTTCATGTACATTGGAAAGGAGCTGCAGAGATCATACTGGAAATGTGTTCAAGTTACTACAATCCCTCTGGATTCGTTATAGATATGGGTGACAGTGAAAAAATGAGTTTTGAGGAGATTATTCAAGGTATGGCAGCTAGCAGACTCCGGTGTATTGCGTTTGCACATAAAGAAGTTCCAGCAGATCAAGACCACACAACTAAGCTAAAAGAAGATGGATTGACCTTGCTGGGACTCGTAGGTCTTAAAGATCCATGCCGTCCAGAAGCGAAGAAAGCAGTTGAAGATTGTCAATATGCAGGGGTGAATGTCAAAATGATTACAGGCGACAATATTTTCACTGCTAAAGCGATAGCCACAGAATGTGGGATACTCAAGTCCAGTCATGACATCTTCAGTGGAGCCGTGATAAACGGTGTGGAATTTCGAAGCTACACCGACTTGGAGAGAATGTTGAAGCTGGACAATATCTGTGTAATGGCGAGGTCTTCTGCTGCAGATAAGCTTCTAATGGTGCGATGCTTGAAGCAGAAAGGTCATGTAGTTGCAGTGACTGGTCATGGCGCTACTGATGCCCCAGCATTGGAAGAAGCTGATATAGGACTATCTATGGGAATTCAAGGAACAGAAGTTGCCAAAGAAAGCTCAGATATTATAATCACGGATGATAACTTTGCTTCAGTGGTCAGTGTTTTGGCATGCGGAAGATGTGTTTATCACAATACGCAGAAGCTCGTCCAATTCCAGCTCACATCAAATGTTGCTGGTCTTTTGATCAACTTTGCAGTAGCGGCTTCATCAAGGCAAGTGCCATTTACGATAGTTCGTTCAATTTGGTTGAACATGATTATGGACACACTACTAGCTCTGGCTCTTACCAAGGACAAACCCACAAAAGAACTCATGGAAAGGCCACCGGTGGGCAGAACTGAGCCCTTCATCACCAATGTCATGTGCAGGAACCTCTTCGCTCAAGCTCTGTACCAAACAACTGTCCTCTTGATATTACAGTTCAGGGGAGAAGCAATGTTTGGTGTTAATGATAAGGTAAATGGCACATTGATCTTTAATACTTTTGTGTTTTGCCAGATGTTCAATGAGTTTAATGCCAGGAAGCTTGTGAAGAAGGATATCTTTAGGAATATCCACACCGACAAATTGTTCATGGGGATAATTGCAGTGGCAGTTATTCTACAGATTGTGACAGTGGAATTTCTAAGCAAATTTGAAGATATAGAGAGGTTGAACTACAGACTATGGGGAGTATGTCTTGGAATTGCAGCCATTTCTTGGCCAATCGGTTGGGTTGTTAAGTGTATACCTGTGCCACAGAAACCCATTTTCCACTACCTGAAGATGAAGATGCACTGA

Protein Analysis

1005

Amino Acids

110.77

Weight (kDa)

6.39

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 91 - 160 2.3e-13 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 212 - 306 2.7e-20 P-type ATPase actuator domain
Cation_ATPase PF13246 470 - 638 1.9e-26 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 608 - 748 2.5e-09 haloacid dehalogenase-like hydrolase
Cation_ATPase_C PF00689 819 - 988 1.8e-36 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2303
AasI GACNNNNNNGTC 1 cut(s) 1887
AccB1I GGYRCC 1 cut(s) 715
AccB7I CCANNNNNTGG 1 cut(s) 2937
AccI GTMKAC 2 cut(s) 759, 2965
AciI CCGC 5 cut(s) 470, 1136, 1142, 2349, 2438
AclI AACGTT 1 cut(s) 381
AclWI GGATC 5 cut(s) 44, 1251, 1282, 1408, 1892
AcoI YGGCCR 1 cut(s) 2939
AcsI RAATTY 7 cut(s) 324, 368, 970, 2069, 2262, 2858, 2870
AcuI CTGAAG 3 cut(s) 1268, 2026, 2310
AdeI CACNNNGTG 1 cut(s) 894
AfaI GTAC 7 cut(s) 202, 450, 523, 738, 1309, 1656, 2630
AfeI AGCGCT 1 cut(s) 1117
AgeI ACCGGT 1 cut(s) 2563
AjnI CCWGG 1 cut(s) 2756
AjuI GAANNNNNNNTTGG 6 cut(s) 188, 220, 663, 695, 2661, 2693
Alw21I GWGCWC 1 cut(s) 1455
Alw26I GTCTC 3 cut(s) 193, 1181, 1259
Alw44I GTGCAC 1 cut(s) 1451
AlwI GGATC 5 cut(s) 44, 1251, 1282, 1408, 1892
AlwNI CAGNNNCTG 1 cut(s) 2201
Aor51HI AGCGCT 1 cut(s) 1117
AoxI GGCC 4 cut(s) 742, 1587, 2558, 2939
ApaLI GTGCAC 1 cut(s) 1451
ApeKI GCWGC 7 cut(s) 989, 1086, 1139, 1670, 1781, 2141, 2927
ApoI RAATTY 7 cut(s) 324, 368, 970, 2069, 2262, 2858, 2870
AsiGI ACCGGT 1 cut(s) 2563
Asp700I GAANNNNTTC 2 cut(s) 818, 2612
AspLEI GCGC 2 cut(s) 1118, 2213
AspS9I GGNCC 1 cut(s) 214
AsuHPI GGTGA 5 cut(s) 911, 1345, 1748, 1963, 2581
AsuII TTCGAA 1 cut(s) 2074
AsuNHI GCTAGC 1 cut(s) 1784
AvaII GGWCC 1 cut(s) 214
BaeGI GKGCMC 1 cut(s) 1455
BaeI ACNNNNGTAYC 2 cut(s) 2009, 2042
BalI TGGCCA 1 cut(s) 2941
BanI GGYRCC 1 cut(s) 715
BanII GRGCYC 2 cut(s) 130, 2583
BbsI GAAGAC 1 cut(s) 2127
Bbv12I GWGCWC 1 cut(s) 1455
BbvCI CCTCAGC 1 cut(s) 342
BbvI GCAGC 7 cut(s) 1001, 1098, 1126, 1657, 1793, 2128, 2939
BccI CCATC 7 cut(s) 119, 719, 816, 1219, 1321, 1534, 1856
BceAI ACGGC 2 cut(s) 1890, 2036
BciT130I CCWGG 1 cut(s) 2758
BciVI GTATCC 1 cut(s) 2010
BclI TGATCA 1 cut(s) 2421
BcoDI GTCTC 3 cut(s) 193, 1181, 1259
BfaI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
BfmI CTRYAG 5 cut(s) 573, 1671, 2142, 2840, 2896
BfoI RGCGCY 2 cut(s) 1119, 2214
BfuI GTATCC 1 cut(s) 2010
BglII AGATCT 1 cut(s) 250
BmcAI AGTACT 2 cut(s) 202, 450
Bme1390I CCNGG 1 cut(s) 2758
Bme18I GGWCC 1 cut(s) 214
BmgT120I GGNCC 1 cut(s) 214
BmiI GGNNCC 6 cut(s) 65, 535, 717, 781, 2050, 2609
BmrFI CCNGG 1 cut(s) 2758
BmrI ACTGGG 1 cut(s) 1333
BmsI GCATC 4 cut(s) 328, 2156, 2209, 3000
BmtI GCTAGC 1 cut(s) 1788
BmuI ACTGGG 1 cut(s) 1333
BpiI GAAGAC 1 cut(s) 2127
BplI GAGNNNNNCTC 2 cut(s) 117, 149
BpmI CTGGAG 2 cut(s) 913, 980
Bpu10I CCTNAGC 1 cut(s) 342
Bpu14I TTCGAA 1 cut(s) 2074
BpuEI CTTGAG 2 cut(s) 2006, 2604
BsaI GGTCTC 2 cut(s) 193, 1181
BsaJI CCNNGG 2 cut(s) 1053, 2526
BsaWI WCCGGW 3 cut(s) 184, 1794, 2563
BsaXI ACNNNNNCTCC 4 cut(s) 699, 729, 2084, 2114
Bse118I RCCGGY 2 cut(s) 718, 2563
Bse1I ACTGG 6 cut(s) 930, 1339, 1447, 1689, 2028, 2206
Bse3DI GCAATG 2 cut(s) 1245, 2679
BseBI CCWGG 1 cut(s) 2758
BseDI CCNNGG 2 cut(s) 1053, 2526
BseGI GGATG 6 cut(s) 453, 691, 872, 888, 1063, 2317
BseMI GCAATG 2 cut(s) 1245, 2679
BseMII CTCAG 4 cut(s) 333, 1500, 2307, 2568
BseNI ACTGG 6 cut(s) 930, 1339, 1447, 1689, 2028, 2206
BseRI GAGGAG 2 cut(s) 122, 1775
BseSI GKGCMC 1 cut(s) 1455
BseXI GCAGC 7 cut(s) 1001, 1098, 1126, 1657, 1793, 2128, 2939
BseYI CCCAGC 3 cut(s) 53, 1876, 2224
BsgI GTGCAG 1 cut(s) 2623
BshFI GGCC 4 cut(s) 744, 1589, 2560, 2941
BshNI GGYRCC 1 cut(s) 715
BshTI ACCGGT 1 cut(s) 2563
BsiHKAI GWGCWC 1 cut(s) 1455
BsiSI CCGG 4 cut(s) 185, 719, 1795, 2564
BslFI GGGAC 2 cut(s) 847, 1893
BsmAI GTCTC 3 cut(s) 193, 1181, 1259
BsmFI GGGAC 2 cut(s) 847, 1893
BsmI GAATGC 3 cut(s) 120, 867, 1572
BsnI GGCC 4 cut(s) 744, 1589, 2560, 2941
Bso31I GGTCTC 2 cut(s) 193, 1181
Bsp119I TTCGAA 1 cut(s) 2074
Bsp1286I GDGCHC 3 cut(s) 130, 1455, 2583
Bsp1407I TGTACA 2 cut(s) 736, 1654
BspACI CCGC 5 cut(s) 470, 1136, 1142, 2349, 2438
BspANI GGCC 4 cut(s) 744, 1589, 2560, 2941
BspCNI CTCAG 4 cut(s) 334, 1499, 2306, 2569
BspHI TCATGA 1 cut(s) 2032
BspLI GGNNCC 6 cut(s) 65, 535, 717, 781, 2050, 2609
BspMAI CTGCAG 3 cut(s) 577, 1675, 2146
BspOI GCTAGC 1 cut(s) 1788
BspPI GGATC 5 cut(s) 44, 1251, 1282, 1408, 1892
BspT104I TTCGAA 1 cut(s) 2074
BspT107I GGYRCC 1 cut(s) 715
BspTNI GGTCTC 2 cut(s) 193, 1181
BsrDI GCAATG 2 cut(s) 1245, 2679
BsrFI RCCGGY 2 cut(s) 718, 2563
BsrGI TGTACA 2 cut(s) 736, 1654
BsrI ACTGG 6 cut(s) 930, 1339, 1447, 1689, 2028, 2206
BssAI RCCGGY 2 cut(s) 718, 2563
BssECI CCNNGG 2 cut(s) 1053, 2526
BssNAI GTATAC 1 cut(s) 2966
BssT1I CCWWGG 2 cut(s) 1053, 2526
Bst1107I GTATAC 1 cut(s) 2966
Bst2UI CCWGG 1 cut(s) 2758
Bst4CI ACNGT 8 cut(s) 448, 676, 1648, 1742, 2063, 2641, 2658, 2854
Bst6I CTCTTC 4 cut(s) 196, 1556, 1622, 2618
BstAPI GCANNNNNTGC 1 cut(s) 1606
BstAUI TGTACA 2 cut(s) 736, 1654
BstBI TTCGAA 1 cut(s) 2074
BstC8I GCNNGC 6 cut(s) 30, 41, 546, 720, 1786, 2347
BstDEI CTNAG 7 cut(s) 342, 460, 1486, 1848, 2293, 2577, 2864
BstEII GGTNACC 1 cut(s) 1333
BstF5I GGATG 6 cut(s) 453, 691, 872, 888, 1063, 2317
BstH2I RGCGCY 2 cut(s) 1119, 2214
BstHHI GCGC 2 cut(s) 1118, 2213
BstMAI GTCTC 3 cut(s) 193, 1181, 1259
BstMWI GCNNNNNNNGC 5 cut(s) 1235, 1606, 1922, 2219, 2438
BstNI CCWGG 1 cut(s) 2758
BstNSI RCATGY 3 cut(s) 32, 43, 2349
BstPI GGTNACC 1 cut(s) 1333
BstSCI CCNGG 1 cut(s) 2756
BstSFI CTRYAG 5 cut(s) 573, 1671, 2142, 2840, 2896
BstSLI GKGCMC 1 cut(s) 1455
BstV1I GCAGC 7 cut(s) 1001, 1098, 1126, 1657, 1793, 2128, 2939
BstV2I GAAGAC 1 cut(s) 2127
BstX2I RGATCY 4 cut(s) 250, 1243, 1274, 1897
BstXI CCANNNNNNTGG 2 cut(s) 1156, 2949
BstYI RGATCY 4 cut(s) 250, 1243, 1274, 1897
BstZ17I GTATAC 1 cut(s) 2966
BsuI GTATCC 1 cut(s) 2010
BsuRI GGCC 4 cut(s) 744, 1589, 2560, 2941
BtgZI GCGATG 1 cut(s) 2179
BtsCI GGATG 6 cut(s) 453, 691, 872, 888, 1063, 2317
BtsI GCAGTG 3 cut(s) 1986, 2202, 2832
Cac8I GCNNGC 6 cut(s) 30, 41, 546, 720, 1786, 2347
CaiI CAGNNNCTG 1 cut(s) 2201
CciI TCATGA 1 cut(s) 2032
CfoI GCGC 2 cut(s) 1118, 2213
Cfr10I RCCGGY 2 cut(s) 718, 2563
Cfr13I GGNCC 1 cut(s) 214
Csp6I GTAC 7 cut(s) 201, 449, 522, 737, 1308, 1655, 2629
CspAI ACCGGT 1 cut(s) 2563
CviQI GTAC 7 cut(s) 201, 449, 522, 737, 1308, 1655, 2629
DdeI CTNAG 7 cut(s) 342, 460, 1486, 1848, 2293, 2577, 2864
DraIII CACNNNGTG 1 cut(s) 894
DrdI GACNNNNNNGTC 1 cut(s) 1887
DseDI GACNNNNNNGTC 1 cut(s) 1887
EaeI YGGCCR 1 cut(s) 2939
Eam1104I CTCTTC 4 cut(s) 196, 1556, 1622, 2618
EarI CTCTTC 4 cut(s) 196, 1556, 1622, 2618
Eco130I CCWWGG 2 cut(s) 1053, 2526
Eco147I AGGCCT 1 cut(s) 1589
Eco24I GRGCYC 2 cut(s) 130, 2583
Eco31I GGTCTC 2 cut(s) 193, 1181
Eco32I GATATC 1 cut(s) 2779
Eco47I GGWCC 1 cut(s) 214
Eco47III AGCGCT 1 cut(s) 1117
Eco57I CTGAAG 3 cut(s) 1268, 2026, 2310
Eco91I GGTNACC 1 cut(s) 1333
EcoO65I GGTNACC 1 cut(s) 1333
EcoRI GAATTC 3 cut(s) 324, 368, 2262
EcoRII CCWGG 1 cut(s) 2756
EcoRV GATATC 1 cut(s) 2779
EcoT14I CCWWGG 2 cut(s) 1053, 2526
EcoT22I ATGCAT 2 cut(s) 24, 30
EcoT38I GRGCYC 2 cut(s) 130, 2583
ErhI CCWWGG 2 cut(s) 1053, 2526
FalI AAGNNNNNCTT 2 cut(s) 2765, 2797
FaqI GGGAC 2 cut(s) 847, 1893
FauNDI CATATG 1 cut(s) 24
FbaI TGATCA 1 cut(s) 2421
FblI GTMKAC 2 cut(s) 759, 2965
FokI GGATG 6 cut(s) 440, 698, 859, 895, 1070, 2324
FriOI GRGCYC 2 cut(s) 130, 2583
FspBI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
GlaI GCGC 2 cut(s) 1117, 2212
GsaI CCCAGC 3 cut(s) 57, 1880, 2228
GsuI CTGGAG 2 cut(s) 913, 980
HaeII RGCGCY 2 cut(s) 1119, 2214
HaeIII GGCC 4 cut(s) 744, 1589, 2560, 2941
HapII CCGG 4 cut(s) 185, 719, 1795, 2564
HhaI GCGC 2 cut(s) 1118, 2213
Hin6I GCGC 2 cut(s) 1116, 2211
HinP1I GCGC 2 cut(s) 1116, 2211
HindIII AAGCTT 3 cut(s) 1374, 2150, 2762
HpaII CCGG 4 cut(s) 185, 719, 1795, 2564
HphI GGTGA 5 cut(s) 911, 1345, 1748, 1963, 2581
Hpy166II GTNNAC 5 cut(s) 214, 385, 760, 1453, 2966
Hpy188I TCNGA 8 cut(s) 7, 310, 670, 813, 1248, 1387, 1434, 2296
Hpy188III TCNNGA 9 cut(s) 353, 697, 959, 1169, 1716, 1835, 1910, 2033, 2647
Hpy8I GTNNAC 5 cut(s) 214, 385, 760, 1453, 2966
HpyAV CCTTC 9 cut(s) 278, 442, 509, 829, 1019, 1166, 1415, 2593, 2767
HpyCH4III ACNGT 8 cut(s) 448, 676, 1648, 1742, 2063, 2641, 2658, 2854
HpyCH4IV ACGT 3 cut(s) 381, 893, 955
HpyF10VI GCNNNNNNNGC 5 cut(s) 1235, 1606, 1922, 2219, 2438
HpyF3I CTNAG 7 cut(s) 342, 460, 1486, 1848, 2293, 2577, 2864
HpySE526I ACGT 3 cut(s) 381, 893, 955
HspAI GCGC 2 cut(s) 1116, 2211
KroI GCCGGC 1 cut(s) 718
KroNI GCCGGC 1 cut(s) 720
Ksp22I TGATCA 1 cut(s) 2421
LmnI GCTCC 3 cut(s) 69, 1667, 2048
Lsp1109I GCAGC 7 cut(s) 1001, 1098, 1126, 1657, 1793, 2128, 2939
LweI GCATC 4 cut(s) 328, 2156, 2209, 3000
MaeI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
MaeII ACGT 3 cut(s) 381, 893, 955
MaeIII GTNAC 8 cut(s) 611, 868, 1279, 1333, 1700, 1736, 2197, 2848
MflI RGATCY 4 cut(s) 250, 1243, 1274, 1897
MhlI GDGCHC 3 cut(s) 130, 1455, 2583
MlsI TGGCCA 1 cut(s) 2941
MluNI TGGCCA 1 cut(s) 2941
MlyI GAGTC 3 cut(s) 920, 1785, 1875
MmeI TCCRAC 2 cut(s) 38, 1520
Mox20I TGGCCA 1 cut(s) 2941
Mph1103I ATGCAT 2 cut(s) 24, 30
MroNI GCCGGC 1 cut(s) 718
MroXI GAANNNNTTC 2 cut(s) 818, 2612
MscI TGGCCA 1 cut(s) 2941
MseI TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
MslI CAYNNNNRTG 6 cut(s) 23, 27, 566, 852, 1154, 2495
Msp20I TGGCCA 1 cut(s) 2941
MspI CCGG 4 cut(s) 185, 719, 1795, 2564
MspR9I CCNGG 1 cut(s) 2758
Mva1269I GAATGC 3 cut(s) 120, 867, 1572
MvaI CCWGG 1 cut(s) 2758
MwoI GCNNNNNNNGC 5 cut(s) 1235, 1606, 1922, 2219, 2438
NaeI GCCGGC 1 cut(s) 720
NdeI CATATG 1 cut(s) 24
NgoMIV GCCGGC 1 cut(s) 718
NheI GCTAGC 1 cut(s) 1784
NlaIV GGNNCC 6 cut(s) 65, 535, 717, 781, 2050, 2609
NmeAIII GCCGAG 1 cut(s) 211
NmuCI GTSAC 5 cut(s) 868, 1333, 1736, 2197, 2848
NsiI ATGCAT 2 cut(s) 24, 30
NspI RCATGY 3 cut(s) 32, 43, 2349
NspV TTCGAA 1 cut(s) 2074
PaeI GCATGC 3 cut(s) 32, 43, 2349
PagI TCATGA 1 cut(s) 2032
PceI AGGCCT 1 cut(s) 1589
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PctI GAATGC 3 cut(s) 120, 867, 1572
PdiI GCCGGC 1 cut(s) 720
PdmI GAANNNNTTC 2 cut(s) 818, 2612
PfeI GAWTC 8 cut(s) 8, 360, 507, 764, 814, 1469, 1595, 1719
PflMI CCANNNNNTGG 1 cut(s) 2937
PinAI ACCGGT 1 cut(s) 2563
PleI GAGTC 3 cut(s) 920, 1785, 1875
PpsI GAGTC 3 cut(s) 920, 1785, 1875
PsiI TTATAA 1 cut(s) 2303
Psp1406I AACGTT 1 cut(s) 381
Psp6I CCWGG 1 cut(s) 2756
PspEI GGTNACC 1 cut(s) 1333
PspFI CCCAGC 3 cut(s) 53, 1876, 2224
PspGI CCWGG 1 cut(s) 2756
PspN4I GGNNCC 6 cut(s) 65, 535, 717, 781, 2050, 2609
PspPI GGNCC 1 cut(s) 214
PstI CTGCAG 3 cut(s) 577, 1675, 2146
PstNI CAGNNNCTG 1 cut(s) 2201
PsuI RGATCY 4 cut(s) 250, 1243, 1274, 1897
RsaI GTAC 7 cut(s) 202, 450, 523, 738, 1309, 1656, 2630
RsaNI GTAC 7 cut(s) 201, 449, 522, 737, 1308, 1655, 2629
RseI CAYNNNNRTG 6 cut(s) 23, 27, 566, 852, 1154, 2495
SaqAI TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
Sau96I GGNCC 1 cut(s) 214
ScaI AGTACT 2 cut(s) 202, 450
SchI GAGTC 3 cut(s) 920, 1785, 1875
ScrFI CCNGG 1 cut(s) 2758
SduI GDGCHC 3 cut(s) 130, 1455, 2583
SfaNI GCATC 4 cut(s) 328, 2156, 2209, 3000
SfcI CTRYAG 5 cut(s) 573, 1671, 2142, 2840, 2896
SfuI TTCGAA 1 cut(s) 2074
SgrAI CRCCGGYG 1 cut(s) 2563
SinI GGWCC 1 cut(s) 214
SmiMI CAYNNNNRTG 6 cut(s) 23, 27, 566, 852, 1154, 2495
SmlI CTYRAG 2 cut(s) 2021, 2619
SmoI CTYRAG 2 cut(s) 2021, 2619
SphI GCATGC 3 cut(s) 32, 43, 2349
SseBI AGGCCT 1 cut(s) 1589
SsiI CCGC 5 cut(s) 470, 1136, 1142, 2349, 2438
SspI AATATT 3 cut(s) 703, 1358, 1981
SspMI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
StuI AGGCCT 1 cut(s) 1589
StyD4I CCNGG 1 cut(s) 2756
StyI CCWWGG 2 cut(s) 1053, 2526
TaaI ACNGT 8 cut(s) 448, 676, 1648, 1742, 2063, 2641, 2658, 2854
TaiI ACGT 3 cut(s) 384, 896, 958
TaqI TCGA 4 cut(s) 124, 859, 1033, 2074
TatI WGTACW 5 cut(s) 200, 448, 521, 736, 1654
TauI GCSGC 3 cut(s) 473, 1139, 2441
TfiI GAWTC 8 cut(s) 8, 360, 507, 764, 814, 1469, 1595, 1719
Tru1I TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
Tru9I TTAA 8 cut(s) 69, 977, 1530, 1893, 2685, 2715, 2751, 2958
TseFI GTSAC 5 cut(s) 868, 1333, 1736, 2197, 2848
TseI GCWGC 7 cut(s) 989, 1086, 1139, 1670, 1781, 2141, 2927
Tsp45I GTSAC 5 cut(s) 868, 1333, 1736, 2197, 2848
TspGWI ACGGA 4 cut(s) 404, 556, 865, 2324
Van91I CCANNNNNTGG 1 cut(s) 2937
VneI GTGCAC 1 cut(s) 1451
VpaK11BI GGWCC 1 cut(s) 214
XapI RAATTY 7 cut(s) 324, 368, 970, 2069, 2262, 2858, 2870
XceI RCATGY 3 cut(s) 32, 43, 2349
XcmI CCANNNNNNNNNTGG 1 cut(s) 1156
XmiI GTMKAC 2 cut(s) 759, 2965
XmnI GAANNNNTTC 2 cut(s) 818, 2612
XspI CTAG 5 cut(s) 60, 177, 998, 1785, 2510
ZrmI AGTACT 2 cut(s) 202, 450
Zsp2I ATGCAT 2 cut(s) 24, 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.