Rorug04G0075200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0001346
Physical Location & Seq
Reverse (-)
11613951 .. 11620569
6619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0075200.1

Sequence Viewer

Length: 2358 bp
ATGGTAGGCATATGGGGGCCTGGTGGAATAGGAAAGACCACGATTGCGAAGGATGTGTTTAATTCAATTCGCCATGAGTTTGAAGAGAGCTGTTTCTTGGCAGATGTTAGATCCAATGGCCTAGACCAACTGCAAAAGACAATTTTGCTTGATATTTTAGGGGACTCAAAGTTGAAGGTGCGCAGTGCTGATGAAGGAGTCAGTTTGATAAAGACAATGATGCGAAATAAAAAAGTTCTCTTAATCCTTGATGACGTGACTCATTCTAGCCAATTACAGAAATTAGTTCCATCCCCTGATTGTTTCGGGCCGGGCAGTAGAATTCTCATTACAACAAGAGATAAACACTGGCTAATTGCTCATCAAGTTGATAAAGTATACAAGGTCAATTTGTTAGATTATCCTCATGCTTTGGAGTTGTTTAGCTTGCATGCATTCAGAAGAAATGGACCTCCAAGCAATTATTTGAAACTTGCACAACGTGCTATATGTTATGCCCAGGGCCTTCCATTAGCTTTGGTAGTTTTAGGCTCTCATCTACTTGGTAGAAGCACAGATGAGTGGGAAGCTATATTAGACAGTTGTAAAGGAGGTCCTCAGATGGAGATACAAGACGTTCTCAGACTAAGTTATGATGCTCTGGGAGCAGATTTAAAAGAACTGTTTCTTCATATTGCTTGCTTCTTTAAAGGTAAGTCTGTAGCCCATGTGAAACCAATACTAGAAGATTGCTACGACCTCAAAACAGTGATTGGTTTTCAACGACTCCAAGAAAAAGCCTTGATAAGAATTGACAAAAATACAATTTGGATGCATGACTTGATAGAAGAAATGGGTAAAGATATAGTATATCAAGAGTCACCTGACGAACCCGGGGAACGCAGCAGAGTGTGGAGTGAAGAAGATGTCGAAGACGTTCTAACAAATAATACAGGAACAAATAAAGTTATAGGCATTCAAGTCCCGTGGCCATCATCTACGATATCTTTGAATGCTAAAAGCTTCTCAAAGATGAAGAGGCTTAGATATATTTCTATGAGCAGAATGGTGGAATATGAATCCTTTTCTGGAGAGATTGATTATCTCTCCGACCAGTTGAGGTGGCTTGATTGGCCTAATAGTCCGTTGCAATCTTTTCCATCCGATTTTCGTGCAAACAGACTTAATTTTTCAAGGCTAACATGTATGAATTTAAGGGGTTGTGAATCCCTAACAGGACTGCCAGACTTCAGTGGAATTCCCAACTTGAAAAAGTTGAATCTTGCAGATTGTAAGAATCTTACAACAATACCATGCAATGAGTTACAAAATCTAGAGATCCTAAATGTGAGTAGATGCTCAAATCTTCTTACATTTCAAACAAAAGCAAGTATGTCACATGATCATGACAGTGGCTCGCTAGCACTTCCCAAGCTACGTGTACTCAAAACCAAAGGGTGTAATTTATCGACTGTTGATTTCATTGGGAGTCTTGATTGCTTGGAAACATTAACCGAACTACATCTCTCAAGTTGCAATTTTGTTAGTGTTCCTGCACTTGGCAAATTTGTAAACTTAAAAGAGATTAACTTGTCTTATAGCAAAAGACTTCGAGAGATTCCAGAGCTTCCACCAAATATACTCGAGGTAAATGCGAGGGATTGCGAATCACTGGATAGTTTTTTTATATTGCCCAAGTCTCCCATCTCTTTGAGTGAGTCAAGGATGTACTTGTGGAATTGCCAGAGTCTGGGCTATGACATGGAGAAGATGGAAAATATTTTGCTGAATAATCAGAAGTCCCGGTTTAGTGTTGTATTACCTGGTAGTGATGTTCCAAAGTGGTTCCATTGTTCGAAGGAACTTGCTGCTAATGAAAAAGGTGTGTTCAGTAAATGTGCAATTTCTTTTGAAATCCCAAGCAAATTGAATTGGGAGAACATAGGAGTGGCTGTTTGTTCTGGTGATGACACTTCTAATTTGTTATTTAACGCTCGAGCTGATATTTCCATCAATGGGGTACTCATATATCAGTGTTCCAGATTGCGCAGTTCAACGCCAGACCATATGTGGCTAACTTGTATTCCATTATCTGATGAAATAAAGGGAAAGGTGGATCAGATAATGGAATCTTGCCCTCATAACGATCAAAAGGGTTGGTGGCCATATAAGTGTCGAGTTCAATTTTACCCTGCTCATTGCATGAAAAGCTGTGGAGTTCACCTCGTATGCCAACCACCGAATGAATATTCAAATAAGATTGTAATGGCGGATCAAATCTCCCAGACTTCTGATTGGGAAGCCAATATTGATCTTGTTCCCGATTGGCTGTCAACTCTTGCTAATTATGATTCTTCCTCACCAGCCAGTACTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

785

Amino Acids

88.41

Weight (kDa)

6.03

Isoelectric Point (pI)

48.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 148 3.3e-22 NB-ARC domain
WHD_ROQ1 PF23282 219 - 287 1.3e-14 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 182, 2027
AccB7I CCANNNNNTGG 1 cut(s) 1729
AccI GTMKAC 1 cut(s) 378
AciI CCGC 1 cut(s) 2249
AclWI GGATC 4 cut(s) 105, 1312, 2103, 2259
AcoI YGGCCR 2 cut(s) 968, 2141
AcsI RAATTY 4 cut(s) 321, 1189, 1236, 1544
AcuI CTGAAG 1 cut(s) 1213
AdeI CACNNNGTG 1 cut(s) 482
AfaI GTAC 4 cut(s) 1422, 1709, 2001, 2350
AfiI CCNNNNNNNGG 3 cut(s) 1538, 1729, 1995
AflIII ACRYGT 2 cut(s) 1181, 1417
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 3 cut(s) 19, 498, 1801
AluBI AGCT 9 cut(s) 90, 426, 515, 569, 1002, 1414, 1606, 1979, 2190
AluI AGCT 9 cut(s) 90, 426, 515, 569, 1002, 1414, 1606, 1979, 2190
Alw26I GTCTC 1 cut(s) 1683
AlwI GGATC 4 cut(s) 105, 1312, 2103, 2259
AlwNI CAGNNNCTG 1 cut(s) 1729
Ama87I CYCGRG 3 cut(s) 872, 1622, 1974
AoxI GGCC 7 cut(s) 17, 118, 308, 502, 968, 1112, 2141
ApeKI GCWGC 2 cut(s) 882, 1847
ApoI RAATTY 4 cut(s) 321, 1189, 1236, 1544
Asp700I GAANNNNTTC 2 cut(s) 663, 915
AspLEI GCGC 2 cut(s) 183, 2028
AspS9I GGNCC 5 cut(s) 17, 308, 449, 502, 593
AsuC2I CCSGG 4 cut(s) 312, 873, 874, 1783
AsuHPI GGTGA 4 cut(s) 852, 1955, 2192, 2331
AsuII TTCGAA 1 cut(s) 1835
AsuNHI GCTAGC 1 cut(s) 1399
AvaI CYCGRG 3 cut(s) 872, 1622, 1974
AvaII GGWCC 2 cut(s) 449, 593
BalI TGGCCA 2 cut(s) 970, 2143
BbsI GAAGAC 1 cut(s) 918
BbvI GCAGC 2 cut(s) 894, 1834
BccI CCATC 7 cut(s) 298, 595, 979, 1147, 1691, 1744, 1997
BcgI CGANNNNNNTGC 4 cut(s) 1133, 1167, 1613, 1647
BciT130I CCWGG 3 cut(s) 21, 500, 1803
BclI TGATCA 1 cut(s) 1381
BcnI CCSGG 4 cut(s) 312, 873, 874, 1783
BcoDI GTCTC 1 cut(s) 1683
BfaI CTAG 5 cut(s) 122, 267, 722, 1313, 1400
BfmI CTRYAG 1 cut(s) 699
BisI GCNGC 2 cut(s) 883, 1848
BlsI GCNGC 2 cut(s) 884, 1849
BmcAI AGTACT 1 cut(s) 2350
Bme1390I CCNGG 7 cut(s) 21, 312, 500, 873, 874, 1783, 1803
Bme18I GGWCC 2 cut(s) 449, 593
BmeT110I CYCGRG 3 cut(s) 872, 1622, 1974
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 5 cut(s) 17, 308, 449, 502, 593
BmiI GGNNCC 2 cut(s) 18, 1826
BmrFI CCNGG 7 cut(s) 21, 312, 500, 873, 874, 1783, 1803
BmsI GCATC 4 cut(s) 210, 625, 801, 1325
BmtI GCTAGC 1 cut(s) 1403
BpiI GAAGAC 1 cut(s) 918
BplI GAGNNNNNCTC 2 cut(s) 2187, 2219
BpmI CTGGAG 1 cut(s) 1089
Bpu14I TTCGAA 1 cut(s) 1835
BpuEI CTTGAG 1 cut(s) 1492
BpuMI CCSGG 4 cut(s) 312, 873, 874, 1783
BsaAI YACGTR 1 cut(s) 1418
BsaJI CCNNGG 5 cut(s) 498, 499, 872, 873, 965
BsaXI ACNNNNNCTCC 2 cut(s) 1917, 1947
Bsc4I CCNNNNNNNGG 3 cut(s) 1538, 1729, 1995
Bse1I ACTGG 4 cut(s) 353, 1093, 1656, 2346
Bse3DI GCAATG 2 cut(s) 1303, 2176
BseBI CCWGG 3 cut(s) 21, 500, 1803
BseDI CCNNGG 5 cut(s) 498, 499, 872, 873, 965
BseGI GGATG 5 cut(s) 58, 290, 816, 1139, 1710
BseLI CCNNNNNNNGG 3 cut(s) 1538, 1729, 1995
BseMI GCAATG 2 cut(s) 1303, 2176
BseMII CTCAG 2 cut(s) 611, 634
BseNI ACTGG 4 cut(s) 353, 1093, 1656, 2346
BseXI GCAGC 2 cut(s) 894, 1834
BsgI GTGCAG 1 cut(s) 1518
BshFI GGCC 7 cut(s) 19, 120, 310, 504, 970, 1114, 2143
BsiHKCI CYCGRG 3 cut(s) 872, 1622, 1974
BsiSI CCGG 3 cut(s) 311, 873, 1783
BslFI GGGAC 3 cut(s) 176, 947, 1765
BslI CCNNNNNNNGG 3 cut(s) 1538, 1729, 1995
BsmAI GTCTC 1 cut(s) 1683
BsmFI GGGAC 3 cut(s) 176, 947, 1765
BsmI GAATGC 3 cut(s) 434, 954, 997
BsnI GGCC 7 cut(s) 19, 120, 310, 504, 970, 1114, 2143
BsoBI CYCGRG 3 cut(s) 872, 1622, 1974
Bsp119I TTCGAA 1 cut(s) 1835
Bsp143I GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
BspACI CCGC 1 cut(s) 2249
BspANI GGCC 7 cut(s) 19, 120, 310, 504, 970, 1114, 2143
BspCNI CTCAG 2 cut(s) 610, 633
BspHI TCATGA 1 cut(s) 1384
BspLI GGNNCC 2 cut(s) 18, 1826
BspOI GCTAGC 1 cut(s) 1403
BspPI GGATC 4 cut(s) 105, 1312, 2103, 2259
BspT104I TTCGAA 1 cut(s) 1835
BsrDI GCAATG 2 cut(s) 1303, 2176
BsrI ACTGG 4 cut(s) 353, 1093, 1656, 2346
BssECI CCNNGG 5 cut(s) 498, 499, 872, 873, 965
BssMI GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
BssNAI GTATAC 1 cut(s) 379
Bst1107I GTATAC 1 cut(s) 379
Bst2UI CCWGG 3 cut(s) 21, 500, 1803
Bst4CI ACNGT 5 cut(s) 581, 663, 748, 1391, 1453
Bst6I CTCTTC 2 cut(s) 78, 1010
BstAPI GCANNNNNTGC 1 cut(s) 482
BstBAI YACGTR 1 cut(s) 1418
BstBI TTCGAA 1 cut(s) 1835
BstC8I GCNNGC 5 cut(s) 428, 432, 679, 1397, 1401
BstDEI CTNAG 4 cut(s) 597, 620, 626, 1022
BstDSI CCRYGG 1 cut(s) 965
BstF5I GGATG 5 cut(s) 58, 290, 816, 1139, 1710
BstHHI GCGC 2 cut(s) 183, 2028
BstKTI GATC 7 cut(s) 113, 1320, 1384, 2098, 2128, 2254, 2293
BstMAI GTCTC 1 cut(s) 1683
BstMBI GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
BstMWI GCNNNNNNNGC 4 cut(s) 482, 644, 1111, 2187
BstNI CCWGG 3 cut(s) 21, 500, 1803
BstNSI RCATGY 2 cut(s) 434, 1185
BstSCI CCNGG 7 cut(s) 19, 310, 498, 871, 872, 1781, 1801
BstSFI CTRYAG 1 cut(s) 699
BstV1I GCAGC 2 cut(s) 894, 1834
BstV2I GAAGAC 1 cut(s) 918
BstX2I RGATCY 2 cut(s) 110, 1317
BstYI RGATCY 2 cut(s) 110, 1317
BstZ17I GTATAC 1 cut(s) 379
BsuRI GGCC 7 cut(s) 19, 120, 310, 504, 970, 1114, 2143
BtgI CCRYGG 1 cut(s) 965
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 5 cut(s) 58, 290, 816, 1139, 1710
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 7 cut(s) 190, 346, 753, 1237, 1396, 1649, 2018
Cac8I GCNNGC 5 cut(s) 428, 432, 679, 1397, 1401
CaiI CAGNNNCTG 1 cut(s) 1729
CciI TCATGA 1 cut(s) 1384
CfoI GCGC 2 cut(s) 183, 2028
Cfr13I GGNCC 5 cut(s) 17, 308, 449, 502, 593
Cfr9I CCCGGG 1 cut(s) 872
CsiI ACCWGGT 1 cut(s) 1801
Csp6I GTAC 4 cut(s) 1421, 1708, 2000, 2349
CspCI CAANNNNNGTGG 2 cut(s) 947, 982
CviQI GTAC 4 cut(s) 1421, 1708, 2000, 2349
DdeI CTNAG 4 cut(s) 597, 620, 626, 1022
DpnI GATC 7 cut(s) 112, 1319, 1383, 2097, 2127, 2253, 2292
DpnII GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
DraI TTTAAA 2 cut(s) 654, 688
DraIII CACNNNGTG 1 cut(s) 482
EaeI YGGCCR 2 cut(s) 968, 2141
Eam1104I CTCTTC 2 cut(s) 78, 1010
EarI CTCTTC 2 cut(s) 78, 1010
EciI GGCGGA 1 cut(s) 2264
Eco32I GATATC 1 cut(s) 984
Eco47I GGWCC 2 cut(s) 449, 593
Eco57I CTGAAG 1 cut(s) 1213
Eco88I CYCGRG 3 cut(s) 872, 1622, 1974
EcoO109I RGGNCCY 3 cut(s) 17, 502, 593
EcoRI GAATTC 2 cut(s) 321, 1236
EcoRII CCWGG 3 cut(s) 19, 498, 1801
EcoRV GATATC 1 cut(s) 984
EcoT22I ATGCAT 2 cut(s) 436, 816
FaqI GGGAC 3 cut(s) 176, 947, 1765
FauNDI CATATG 2 cut(s) 11, 2046
FbaI TGATCA 1 cut(s) 1381
FblI GTMKAC 1 cut(s) 378
Fnu4HI GCNGC 2 cut(s) 883, 1848
FokI GGATG 5 cut(s) 65, 277, 823, 1126, 1717
Fsp4HI GCNGC 2 cut(s) 883, 1848
FspBI CTAG 5 cut(s) 122, 267, 722, 1313, 1400
FspI TGCGCA 2 cut(s) 182, 2027
GlaI GCGC 2 cut(s) 182, 2027
GluI GCNGC 2 cut(s) 883, 1848
GsuI CTGGAG 1 cut(s) 1089
HaeIII GGCC 7 cut(s) 19, 120, 310, 504, 970, 1114, 2143
HapII CCGG 3 cut(s) 311, 873, 1783
HhaI GCGC 2 cut(s) 183, 2028
Hin6I GCGC 2 cut(s) 181, 2026
HinP1I GCGC 2 cut(s) 181, 2026
HincII GTYRAC 1 cut(s) 2313
HindII GTYRAC 1 cut(s) 2313
HindIII AAGCTT 1 cut(s) 1000
HpaII CCGG 3 cut(s) 311, 873, 1783
HphI GGTGA 4 cut(s) 852, 1955, 2192, 2331
Hpy166II GTNNAC 5 cut(s) 379, 1421, 1552, 2200, 2313
Hpy188I TCNGA 9 cut(s) 440, 600, 623, 1090, 1144, 1776, 2074, 2100, 2272
Hpy188III TCNNGA 9 cut(s) 854, 1068, 1313, 1385, 1472, 1592, 1601, 2019, 2300
Hpy8I GTNNAC 5 cut(s) 379, 1421, 1552, 2200, 2313
HpyAV CCTTC 5 cut(s) 43, 169, 188, 515, 1831
HpyCH4III ACNGT 5 cut(s) 581, 663, 748, 1391, 1453
HpyCH4IV ACGT 5 cut(s) 255, 481, 615, 915, 1417
HpyF10VI GCNNNNNNNGC 4 cut(s) 482, 644, 1111, 2187
HpyF3I CTNAG 4 cut(s) 597, 620, 626, 1022
HpySE526I ACGT 5 cut(s) 255, 481, 615, 915, 1417
HspAI GCGC 2 cut(s) 181, 2026
Ksp22I TGATCA 1 cut(s) 1381
Kzo9I GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
LmnI GCTCC 1 cut(s) 644
Lsp1109I GCAGC 2 cut(s) 894, 1834
LweI GCATC 4 cut(s) 210, 625, 801, 1325
MabI ACCWGGT 1 cut(s) 1801
MaeI CTAG 5 cut(s) 122, 267, 722, 1313, 1400
MaeII ACGT 5 cut(s) 255, 481, 615, 915, 1417
MaeIII GTNAC 4 cut(s) 256, 858, 1302, 1374
MalI GATC 7 cut(s) 112, 1319, 1383, 2097, 2127, 2253, 2292
MboI GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
MflI RGATCY 2 cut(s) 110, 1317
MlsI TGGCCA 2 cut(s) 970, 2143
MluNI TGGCCA 2 cut(s) 970, 2143
MlyI GAGTC 8 cut(s) 158, 207, 253, 759, 866, 1477, 1706, 1735
MmeI TCCRAC 1 cut(s) 1113
Mox20I TGGCCA 2 cut(s) 970, 2143
Mph1103I ATGCAT 2 cut(s) 436, 816
MroXI GAANNNNTTC 2 cut(s) 663, 915
MscI TGGCCA 2 cut(s) 970, 2143
MslI CAYNNNNRTG 4 cut(s) 1383, 1389, 1925, 2149
Msp20I TGGCCA 2 cut(s) 970, 2143
MspI CCGG 3 cut(s) 311, 873, 1783
MspR9I CCNGG 7 cut(s) 21, 312, 500, 873, 874, 1783, 1803
Mva1269I GAATGC 3 cut(s) 434, 954, 997
MvaI CCWGG 3 cut(s) 21, 500, 1803
MwoI GCNNNNNNNGC 4 cut(s) 482, 644, 1111, 2187
NciI CCSGG 4 cut(s) 312, 873, 874, 1783
NdeI CATATG 2 cut(s) 11, 2046
NdeII GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
NheI GCTAGC 1 cut(s) 1399
NlaIV GGNNCC 2 cut(s) 18, 1826
NmuCI GTSAC 3 cut(s) 256, 858, 1374
NsbI TGCGCA 2 cut(s) 182, 2027
NsiI ATGCAT 2 cut(s) 436, 816
NspI RCATGY 2 cut(s) 434, 1185
NspV TTCGAA 1 cut(s) 1835
PaeI GCATGC 1 cut(s) 434
PaeR7I CTCGAG 2 cut(s) 1622, 1974
PagI TCATGA 1 cut(s) 1384
PasI CCCWGGG 1 cut(s) 499
PciI ACATGT 1 cut(s) 1181
PctI GAATGC 3 cut(s) 434, 954, 997
PdmI GAANNNNTTC 2 cut(s) 663, 915
PfeI GAWTC 8 cut(s) 1058, 1205, 1258, 1276, 1597, 1646, 2108, 2330
PflMI CCANNNNNTGG 1 cut(s) 1729
PkrI GCNGC 2 cut(s) 884, 1849
PleI GAGTC 8 cut(s) 158, 206, 253, 759, 865, 1476, 1705, 1734
PpsI GAGTC 8 cut(s) 158, 206, 253, 759, 865, 1476, 1705, 1734
Ppu21I YACGTR 1 cut(s) 1418
PpuMI RGGWCCY 1 cut(s) 593
PscI ACATGT 1 cut(s) 1181
Psp5II RGGWCCY 1 cut(s) 593
Psp6I CCWGG 3 cut(s) 19, 498, 1801
PspGI CCWGG 3 cut(s) 19, 498, 1801
PspN4I GGNNCC 2 cut(s) 18, 1826
PspPI GGNCC 5 cut(s) 17, 308, 449, 502, 593
PspPPI RGGWCCY 1 cut(s) 593
PspXI VCTCGAGB 2 cut(s) 1622, 1974
PstNI CAGNNNCTG 1 cut(s) 1729
PsuI RGATCY 2 cut(s) 110, 1317
RsaI GTAC 4 cut(s) 1422, 1709, 2001, 2350
RsaNI GTAC 4 cut(s) 1421, 1708, 2000, 2349
RseI CAYNNNNRTG 4 cut(s) 1383, 1389, 1925, 2149
SatI GCNGC 2 cut(s) 883, 1848
Sau3AI GATC 7 cut(s) 110, 1317, 1381, 2095, 2125, 2251, 2290
Sau96I GGNCC 5 cut(s) 17, 308, 449, 502, 593
ScaI AGTACT 1 cut(s) 2350
SchI GAGTC 8 cut(s) 158, 207, 253, 759, 866, 1477, 1706, 1735
ScrFI CCNGG 7 cut(s) 21, 312, 500, 873, 874, 1783, 1803
SexAI ACCWGGT 1 cut(s) 1801
SfaNI GCATC 4 cut(s) 210, 625, 801, 1325
SfcI CTRYAG 1 cut(s) 699
Sfr274I CTCGAG 2 cut(s) 1622, 1974
SfuI TTCGAA 1 cut(s) 1835
SinI GGWCC 2 cut(s) 449, 593
SlaI CTCGAG 2 cut(s) 1622, 1974
SmaI CCCGGG 1 cut(s) 874
SmiMI CAYNNNNRTG 4 cut(s) 1383, 1389, 1925, 2149
SmlI CTYRAG 3 cut(s) 1507, 1622, 1974
SmoI CTYRAG 3 cut(s) 1507, 1622, 1974
SphI GCATGC 1 cut(s) 434
SsiI CCGC 1 cut(s) 2249
SspI AATATT 3 cut(s) 1759, 2228, 2287
SspMI CTAG 5 cut(s) 122, 267, 722, 1313, 1400
StyD4I CCNGG 7 cut(s) 19, 310, 498, 871, 872, 1781, 1801
TaaI ACNGT 5 cut(s) 581, 663, 748, 1391, 1453
TaiI ACGT 5 cut(s) 258, 484, 618, 918, 1420
TaqI TCGA 7 cut(s) 909, 1448, 1591, 1623, 1835, 1975, 2155
TatI WGTACW 3 cut(s) 1420, 1707, 2348
TfiI GAWTC 8 cut(s) 1058, 1205, 1258, 1276, 1597, 1646, 2108, 2330
TscAI CASTG 7 cut(s) 190, 353, 753, 1237, 1396, 1656, 2018
TseFI GTSAC 3 cut(s) 256, 858, 1374
TseI GCWGC 2 cut(s) 882, 1847
Tsp45I GTSAC 3 cut(s) 256, 858, 1374
TspGWI ACGGA 1 cut(s) 1113
TspMI CCCGGG 1 cut(s) 872
TspRI CASTG 7 cut(s) 190, 353, 753, 1237, 1396, 1656, 2018
Van91I CCANNNNNTGG 1 cut(s) 1729
VpaK11BI GGWCC 2 cut(s) 449, 593
XapI RAATTY 4 cut(s) 321, 1189, 1236, 1544
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 2 cut(s) 434, 1185
XcmI CCANNNNNNNNNTGG 1 cut(s) 2046
XhoI CTCGAG 2 cut(s) 1622, 1974
XmaI CCCGGG 1 cut(s) 872
XmiI GTMKAC 1 cut(s) 378
XmnI GAANNNNTTC 2 cut(s) 663, 915
XspI CTAG 5 cut(s) 122, 267, 722, 1313, 1400
ZrmI AGTACT 1 cut(s) 2350
Zsp2I ATGCAT 2 cut(s) 436, 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.