Rh5BG190000

glutathione s-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0001346
Physical Location & Seq
Forward (+)
20952012 .. 20966992
14981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG190000.1

Sequence Viewer

Length: 726 bp
ATGAAAGGAGAAACTAAGTTTGCCGATGGTCTGATCTTTTTATTTGTGCATGGCTTCTTACCTGGGCTTTCTCAGGTTTGGAGGGAGAAGAACGTTATAAAGCCAACAGCAGGAAAGAGACGTTGTAACTGTAGAAATGAGGTCTATCAAAGGCAAAGCAGTCCGAGAATGTTCCAACAGATGACGGAACAGGTCTGCGAACAATGTAACAATGTTAAATATGAAAGGGAGGGATATTTCATCACTGTTGATATTGAGAAAGGGATGCAAGATGGACAAGAGGTGGTTTTCTATGAGGATGGTGAACCCATAATTGATGGAGAACCTGGAGATTTAAAAACTCTGCCAGGACCTATTAGGAGAGGCAACAATATCTTGGTACTGGATGCAAAGCCTCTTTTGAAGGAGGCCCTTCAAGCCGAGGGTAAACAAAAGGATTTATATGATGCAGGCAGGAAGATATGGATTACAAAAGGAGAAGAGCTGCAGGCACCAAAGAAGGAATTCATTGAAAGCCTGAAGGTGTTGGAAGGAGAGCTTGGAGACAAGCCTTATTTCATGGGTGAGAGATTTGGGTTCCTGGACATTGCTCTCATCACATTCTACAGCTGGTTTCATGCTTATGAGACACTTGGAAACTTCAGTATAGAGGCCGAGTGCCCCAAGCTGATTTCATGGGCCAAGAGGTGCTTGCAGGAGAGTGTTTCAAAATCTCTTGCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016740 GO:0016765 GO:0018973 GO:0018974 GO:0019326 GO:0019439 GO:0019748 GO:0019899 GO:0031090 GO:0031668 GO:0033218 GO:0033554 GO:0034641 GO:0042221 GO:0042277 GO:0042537 GO:0042631 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046256 GO:0046260 GO:0046263 GO:0046686 GO:0048037 GO:0048046 GO:0048583 GO:0050789 GO:0050896 GO:0051186 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071944 GO:0072341 GO:0072490 GO:0072491 GO:0080167 GO:0098588 GO:0098754 GO:0098805 GO:0104004 GO:1900750 GO:1901360 GO:1901361 GO:1901564 GO:1901575 GO:1901681 GO:1901700 GO:1901701 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

241

Amino Acids

27.61

Weight (kDa)

5.5

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 160 - 232 2.8e-07 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 167 - 229 6.8e-10 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 98
AccB1I GGYRCC 1 cut(s) 490
AclI AACGTT 1 cut(s) 93
AcsI RAATTY 1 cut(s) 503
AcuI CTGAAG 2 cut(s) 539, 625
AfaI GTAC 1 cut(s) 381
AfiI CCNNNNNNNGG 1 cut(s) 110
AgsI TTSAA 4 cut(s) 403, 416, 512, 708
AjnI CCWGG 4 cut(s) 61, 325, 346, 579
AjuI GAANNNNNNNTTGG 2 cut(s) 522, 554
AluBI AGCT 4 cut(s) 484, 538, 609, 667
AluI AGCT 4 cut(s) 484, 538, 609, 667
Alw26I GTCTC 3 cut(s) 112, 537, 620
AoxI GGCC 3 cut(s) 408, 651, 678
ApeKI GCWGC 1 cut(s) 484
ApoI RAATTY 1 cut(s) 503
Asp700I GAANNNNTTC 1 cut(s) 503
AspS9I GGNCC 3 cut(s) 350, 409, 678
AsuHPI GGTGA 2 cut(s) 314, 575
AvaII GGWCC 1 cut(s) 350
BaeGI GKGCMC 1 cut(s) 662
BanI GGYRCC 1 cut(s) 490
BbvI GCAGC 1 cut(s) 471
BccI CCATC 4 cut(s) 20, 266, 293, 311
BciT130I CCWGG 4 cut(s) 63, 327, 348, 581
BcoDI GTCTC 3 cut(s) 112, 537, 620
BfaI CTAG 1 cut(s) 724
BfmI CTRYAG 3 cut(s) 130, 485, 604
BisI GCNGC 1 cut(s) 485
BlsI GCNGC 1 cut(s) 486
Bme1390I CCNGG 4 cut(s) 63, 327, 348, 581
Bme18I GGWCC 1 cut(s) 350
BmgT120I GGNCC 3 cut(s) 350, 409, 678
BmiI GGNNCC 2 cut(s) 492, 578
BmrFI CCNGG 4 cut(s) 63, 327, 348, 581
BmsI GCATC 3 cut(s) 255, 376, 436
BpmI CTGGAG 1 cut(s) 348
BsaJI CCNNGG 2 cut(s) 62, 420
Bsc4I CCNNNNNNNGG 1 cut(s) 110
Bse1I ACTGG 1 cut(s) 387
Bse3DI GCAATG 1 cut(s) 585
BseBI CCWGG 4 cut(s) 63, 327, 348, 581
BseDI CCNNGG 2 cut(s) 62, 420
BseGI GGATG 3 cut(s) 270, 304, 391
BseLI CCNNNNNNNGG 1 cut(s) 110
BseMI GCAATG 1 cut(s) 585
BseMII CTCAG 1 cut(s) 86
BseNI ACTGG 1 cut(s) 387
BseSI GKGCMC 1 cut(s) 662
BseXI GCAGC 1 cut(s) 471
BshFI GGCC 3 cut(s) 410, 653, 680
BshNI GGYRCC 1 cut(s) 490
BslI CCNNNNNNNGG 1 cut(s) 110
BsmAI GTCTC 3 cut(s) 112, 537, 620
BsmBI CGTCTC 1 cut(s) 112
BsnI GGCC 3 cut(s) 410, 653, 680
Bsp1286I GDGCHC 1 cut(s) 662
Bsp143I GATC 1 cut(s) 33
BspANI GGCC 3 cut(s) 410, 653, 680
BspCNI CTCAG 1 cut(s) 85
BspLI GGNNCC 2 cut(s) 492, 578
BspMAI CTGCAG 1 cut(s) 489
BspQI GCTCTTC 1 cut(s) 474
BspT107I GGYRCC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 585
BsrI ACTGG 1 cut(s) 387
BssECI CCNNGG 2 cut(s) 62, 420
BssMI GATC 1 cut(s) 33
Bst2UI CCWGG 4 cut(s) 63, 327, 348, 581
Bst4CI ACNGT 2 cut(s) 131, 247
Bst6I CTCTTC 1 cut(s) 474
BstC8I GCNNGC 3 cut(s) 451, 489, 692
BstDEI CTNAG 2 cut(s) 15, 72
BstF5I GGATG 3 cut(s) 270, 304, 391
BstKTI GATC 1 cut(s) 36
BstMAI GTCTC 3 cut(s) 112, 537, 620
BstMBI GATC 1 cut(s) 33
BstMWI GCNNNNNNNGC 1 cut(s) 416
BstNI CCWGG 4 cut(s) 63, 327, 348, 581
BstSCI CCNGG 4 cut(s) 61, 325, 346, 579
BstSFI CTRYAG 3 cut(s) 130, 485, 604
BstSLI GKGCMC 1 cut(s) 662
BstV1I GCAGC 1 cut(s) 471
BsuRI GGCC 3 cut(s) 410, 653, 680
BtsCI GGATG 3 cut(s) 270, 304, 391
BtsIMutI CAGTG 1 cut(s) 243
Cac8I GCNNGC 3 cut(s) 451, 489, 692
Cfr13I GGNCC 3 cut(s) 350, 409, 678
Csp6I GTAC 1 cut(s) 380
CviAII CATG 4 cut(s) 50, 559, 617, 675
CviQI GTAC 1 cut(s) 380
DdeI CTNAG 2 cut(s) 15, 72
DpnI GATC 1 cut(s) 35
DpnII GATC 1 cut(s) 33
DraI TTTAAA 1 cut(s) 336
Eam1104I CTCTTC 1 cut(s) 474
EarI CTCTTC 1 cut(s) 474
Eco47I GGWCC 1 cut(s) 350
Eco57I CTGAAG 2 cut(s) 539, 625
EcoO109I RGGNCCY 2 cut(s) 350, 409
EcoRI GAATTC 1 cut(s) 503
EcoRII CCWGG 4 cut(s) 61, 325, 346, 579
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 4 cut(s) 53, 562, 620, 678
FalI AAGNNNNNCTT 4 cut(s) 522, 554, 674, 706
FatI CATG 4 cut(s) 49, 558, 616, 674
Fnu4HI GCNGC 1 cut(s) 485
FokI GGATG 3 cut(s) 277, 311, 398
Fsp4HI GCNGC 1 cut(s) 485
FspBI CTAG 1 cut(s) 724
GluI GCNGC 1 cut(s) 485
GsuI CTGGAG 1 cut(s) 348
HaeIII GGCC 3 cut(s) 410, 653, 680
Hin1II CATG 4 cut(s) 53, 562, 620, 678
HphI GGTGA 2 cut(s) 314, 575
Hpy166II GTNNAC 2 cut(s) 305, 428
Hpy188I TCNGA 2 cut(s) 33, 165
Hpy8I GTNNAC 2 cut(s) 305, 428
HpyAV CCTTC 5 cut(s) 397, 422, 493, 514, 524
HpyCH4III ACNGT 2 cut(s) 131, 247
HpyCH4IV ACGT 2 cut(s) 93, 121
HpyCH4V TGCA 6 cut(s) 49, 268, 389, 449, 487, 694
HpyF10VI GCNNNNNNNGC 1 cut(s) 416
HpyF3I CTNAG 2 cut(s) 15, 72
HpySE526I ACGT 2 cut(s) 93, 121
Hsp92II CATG 4 cut(s) 53, 562, 620, 678
Kzo9I GATC 1 cut(s) 33
LguI GCTCTTC 1 cut(s) 474
Lsp1109I GCAGC 1 cut(s) 471
LweI GCATC 3 cut(s) 255, 376, 436
MaeI CTAG 1 cut(s) 724
MaeII ACGT 2 cut(s) 93, 121
MaeIII GTNAC 2 cut(s) 125, 206
MalI GATC 1 cut(s) 35
MboI GATC 1 cut(s) 33
MboII GAAGA 3 cut(s) 100, 469, 491
MhlI GDGCHC 1 cut(s) 662
MluCI AATT 2 cut(s) 312, 503
MmeI TCCRAC 2 cut(s) 199, 507
MroXI GAANNNNTTC 1 cut(s) 503
MseI TTAA 2 cut(s) 216, 335
MslI CAYNNNNRTG 1 cut(s) 621
MspA1I CMGCKG 1 cut(s) 609
MspR9I CCNGG 4 cut(s) 63, 327, 348, 581
MvaI CCWGG 4 cut(s) 63, 327, 348, 581
MwoI GCNNNNNNNGC 1 cut(s) 416
NdeII GATC 1 cut(s) 33
NlaIII CATG 4 cut(s) 53, 562, 620, 678
NlaIV GGNNCC 2 cut(s) 492, 578
NmeAIII GCCGAG 2 cut(s) 445, 679
PciSI GCTCTTC 1 cut(s) 474
PdmI GAANNNNTTC 1 cut(s) 503
PfoI TCCNGGA 1 cut(s) 579
PkrI GCNGC 1 cut(s) 486
PpuMI RGGWCCY 1 cut(s) 350
PsiI TTATAA 1 cut(s) 98
Psp1406I AACGTT 1 cut(s) 93
Psp5II RGGWCCY 1 cut(s) 350
Psp6I CCWGG 4 cut(s) 61, 325, 346, 579
PspGI CCWGG 4 cut(s) 61, 325, 346, 579
PspN4I GGNNCC 2 cut(s) 492, 578
PspPI GGNCC 3 cut(s) 350, 409, 678
PspPPI RGGWCCY 1 cut(s) 350
PstI CTGCAG 1 cut(s) 489
PvuII CAGCTG 1 cut(s) 609
RsaI GTAC 1 cut(s) 381
RsaNI GTAC 1 cut(s) 380
RseI CAYNNNNRTG 1 cut(s) 621
SapI GCTCTTC 1 cut(s) 474
SaqAI TTAA 2 cut(s) 216, 335
SatI GCNGC 1 cut(s) 485
Sau3AI GATC 1 cut(s) 33
Sau96I GGNCC 3 cut(s) 350, 409, 678
ScrFI CCNGG 4 cut(s) 63, 327, 348, 581
SduI GDGCHC 1 cut(s) 662
SfaNI GCATC 3 cut(s) 255, 376, 436
SfcI CTRYAG 3 cut(s) 130, 485, 604
SinI GGWCC 1 cut(s) 350
SmiMI CAYNNNNRTG 1 cut(s) 621
Sse9I AATT 2 cut(s) 312, 503
SspMI CTAG 1 cut(s) 724
StyD4I CCNGG 4 cut(s) 61, 325, 346, 579
TaaI ACNGT 2 cut(s) 131, 247
TaiI ACGT 2 cut(s) 96, 124
TasI AATT 2 cut(s) 312, 503
Tru1I TTAA 2 cut(s) 216, 335
Tru9I TTAA 2 cut(s) 216, 335
TscAI CASTG 1 cut(s) 250
TseI GCWGC 1 cut(s) 484
TspDTI ATGAA 7 cut(s) 17, 229, 237, 496, 547, 605, 663
TspGWI ACGGA 1 cut(s) 200
TspRI CASTG 1 cut(s) 250
VpaK11BI GGWCC 1 cut(s) 350
XapI RAATTY 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 503
XspI CTAG 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.