Rroxscaffold_1G00059450

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000956
Physical Location & Seq
Reverse (-)
81442033 .. 81443941
1909 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00059450.1

Sequence Viewer

Length: 1692 bp
ATGCAATGGCTTCATTATAAATGCTATCGATTACAGCCTACAAGAGAGTCGAGAAGTCAAAAACTAGCAGCACTCGAAAAAATGTCACAAATGTTAATGGAGGTACCAAGTTCTATTGTTGTAATACTCTTCATTCTCTCAGTTCTTTTGCTTCCAGAATCATCGGCAATTACTTCAAATCTCAGTCTCGATAACTTCCTCGAATGCCTTCCAAGAGAATCTAAACCCCGCTACCCAATCTCTGAAGCCATTCACACCCACCAAAATACCTCTTTTCAATCTGTTTTGTTGGCCTACATCAGAAACAGTAGGTATTCCACACCTAGAACTCCAAAACCATTGGCAGTTGTAACGGCCAAGCATAATTCCCATGTCCAAGCAACTGTGATTTGTGCAAAACGGCATGCATTGCAGATTAGAATACGAAGTGGTGGCCATGATTACGAGAGTCTTTCATACGTGTCACATGTTCCCTTTGTCATTCTTGACATGTCTGATCTTCGTTTCATTAGCATTAATGTCAGAGATGAAAGCGCTTGGGTTGAGTCTGGGGCTATTGTGGGTGAACTTTACTCCAAAATTGGAAACAAAAGTAAAGTTCTTGGCTTTTCGGCTTCAGCTTGTCCCAGCGTCGGTGCTGGTGGTCACTTTAGTGCTGGTGGGTATGGTCCTATGATGAGAAAATATGGACTTGCAGCGGATAACGTCGTAGATGCTAAAATAGTAACTGTGAATGGCTGCATTCTTGATAGAAAGTCCATGGGAGAAGACCTCTTTTGGGCTATTAGAGGAGGTGGTGGAGCAAGCTTTGGAGTCATTCTTTCATGGAAGATCAAATTGCTTCGTGTCCCTTCCAAAGTTACTGTTTTCAGTGTTCAAAGGACCCTTAAGCAAGGCGCAACCGATGTCATTTACCGGTGGCAATACGTGGCTCCTAAGCTACCAAAGGAAGTCTTCATCAGAGCAATGCCTCGAGTCAAGAATACTACTGAAGGTAACAAGACTGTGAAAGTGTTATTCATTGGTCACTACTTGGGACAAAGTGACAATCTTGTTTCATTGTTGAGTGAGAGGTTCCCTGAATTGGGTTTGCAGAAAACAGACTGCTTTGAAATGAGTTGGGTGGAATCGACTGTGTTTTGGGCTGGCTACCCGGCTGGAACTCCCACCAATGTTCTACTTGACAGGCCAGTGGGTCCAGGAGTCTTTTTCAAAAGTAAATCTGACTATGTGAAAGAGCCAATTCCAAAAGAAGGCATAGAATCCATATGGACGGAGCTGCTTAAGACTGAGAAAATGTGGATGCAATGGAACCCTTATGGTGGAAGAATGAGTGAGATTTCTGAGTCGGAAACTCCATTCCCACACAGAGCAGGAAACCTGTTCCTGATTCAGTACTTCATTCTTTGGGTGAATGAAACGGATACCAACAAGTACCTTGACCTGTCAAGAAAGTTTTACAAAACAATGACTCCATTTGTGTCCAAGAACCCAAGAGAGGCCTACCAAAACTATAGGGATCTTGATATTGGTGCCAATTTGTATAATCACACTGACTTCAACACTGCTAGAGCCTATGGAAGAAAATACTTCAAAGGTAATTTCGAAAGGCTGGCATGTGTGAAAGCCGAGGTTGATCCCCAGAATTTTTTCCAGCACGAGCAAAGTATCCCACCTCTTGGGAGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BBE FAD_binding_4

Protein Analysis

563

Amino Acids

63.74

Weight (kDa)

9.4

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_4 PF01565 113 - 249 7.9e-24 FAD binding domain
BBE PF08031 501 - 558 1.5e-18 Berberine and berberine like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 18
Acc65I GGTACC 1 cut(s) 103
AccB1I GGYRCC 2 cut(s) 103, 1532
AccB7I CCANNNNNTGG 1 cut(s) 1679
AciI CCGC 2 cut(s) 229, 698
AclWI GGATC 2 cut(s) 1527, 1631
AcoI YGGCCR 2 cut(s) 354, 433
AcsI RAATTY 1 cut(s) 1645
AcuI CTGAAG 3 cut(s) 264, 600, 1011
AfaI GTAC 3 cut(s) 105, 1397, 1436
AfeI AGCGCT 1 cut(s) 535
AfiI CCNNNNNNNGG 8 cut(s) 632, 778, 1084, 1085, 1253, 1322, 1498, 1679
AflII CTTAAG 2 cut(s) 887, 1283
AflIII ACRYGT 3 cut(s) 459, 466, 489
AgeI ACCGGT 1 cut(s) 915
AgsI TTSAA 7 cut(s) 177, 278, 878, 1112, 1213, 1561, 1594
AjnI CCWGG 1 cut(s) 1198
AleI CACNNNNGTG 1 cut(s) 651
AluBI AGCT 4 cut(s) 620, 807, 940, 1279
AluI AGCT 4 cut(s) 620, 807, 940, 1279
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 2 cut(s) 1527, 1631
Ama87I CYCGRG 1 cut(s) 972
Aor51HI AGCGCT 1 cut(s) 535
AoxI GGCC 5 cut(s) 291, 354, 433, 1187, 1500
ApeKI GCWGC 4 cut(s) 68, 695, 738, 1279
ApoI RAATTY 1 cut(s) 1645
AseI ATTAAT 1 cut(s) 516
AsiGI ACCGGT 1 cut(s) 915
Asp700I GAANNNNTTC 3 cut(s) 207, 249, 1649
Asp718I GGTACC 1 cut(s) 103
AspLEI GCGC 2 cut(s) 536, 899
AspS9I GGNCC 3 cut(s) 668, 882, 1196
AsuC2I CCSGG 1 cut(s) 1154
AsuHPI GGTGA 2 cut(s) 575, 1423
AsuII TTCGAA 1 cut(s) 1605
AvaI CYCGRG 1 cut(s) 972
AvaII GGWCC 3 cut(s) 668, 882, 1196
BalI TGGCCA 1 cut(s) 435
BanI GGYRCC 2 cut(s) 103, 1532
BauI CACGAG 1 cut(s) 1658
BbsI GAAGAC 2 cut(s) 774, 946
BbvI GCAGC 4 cut(s) 80, 707, 725, 1266
BceAI ACGGC 2 cut(s) 369, 416
BciT130I CCWGG 1 cut(s) 1200
BciVI GTATCC 2 cut(s) 1417, 1679
BcnI CCSGG 1 cut(s) 1154
BcoDI GTCTC 1 cut(s) 191
BfaI CTAG 3 cut(s) 65, 324, 1569
BfmI CTRYAG 1 cut(s) 1513
BfoI RGCGCY 1 cut(s) 537
BfrI CTTAAG 2 cut(s) 887, 1283
BfuI GTATCC 2 cut(s) 1417, 1679
BisI GCNGC 4 cut(s) 69, 696, 739, 1280
BlsI GCNGC 4 cut(s) 70, 697, 740, 1281
BmcAI AGTACT 1 cut(s) 1397
Bme1390I CCNGG 2 cut(s) 1154, 1200
Bme18I GGWCC 3 cut(s) 668, 882, 1196
BmeT110I CYCGRG 1 cut(s) 972
BmgT120I GGNCC 3 cut(s) 668, 882, 1196
BmiI GGNNCC 7 cut(s) 105, 884, 933, 1076, 1197, 1313, 1534
BmrFI CCNGG 2 cut(s) 1154, 1200
BmsI GCATC 2 cut(s) 703, 1293
BpiI GAAGAC 2 cut(s) 774, 946
BplI GAGNNNNNCTC 2 cut(s) 756, 788
Bpu10I CCTNAGC 1 cut(s) 936
Bpu14I TTCGAA 1 cut(s) 1605
BpuMI CCSGG 1 cut(s) 1154
Bsa29I ATCGAT 1 cut(s) 28
BsaAI YACGTR 2 cut(s) 460, 928
BsaJI CCNNGG 2 cut(s) 759, 1629
BsaWI WCCGGW 1 cut(s) 915
BsaXI ACNNNNNCTCC 2 cut(s) 1456, 1486
Bsc4I CCNNNNNNNGG 8 cut(s) 632, 778, 1084, 1085, 1253, 1322, 1498, 1679
Bse118I RCCGGY 1 cut(s) 915
Bse1I ACTGG 1 cut(s) 1190
Bse3DI GCAATG 4 cut(s) 11, 407, 972, 1313
BseBI CCWGG 1 cut(s) 1200
BseCI ATCGAT 1 cut(s) 28
BseDI CCNNGG 2 cut(s) 759, 1629
BseGI GGATG 1 cut(s) 1308
BseLI CCNNNNNNNGG 8 cut(s) 632, 778, 1084, 1085, 1253, 1322, 1498, 1679
BseMI GCAATG 4 cut(s) 11, 407, 972, 1313
BseMII CTCAG 4 cut(s) 153, 196, 1281, 1335
BseNI ACTGG 1 cut(s) 1190
BseRI GAGGAG 1 cut(s) 804
BseXI GCAGC 4 cut(s) 80, 707, 725, 1266
BseYI CCCAGC 1 cut(s) 626
BshFI GGCC 5 cut(s) 293, 356, 435, 1189, 1502
BshNI GGYRCC 2 cut(s) 103, 1532
BshTI ACCGGT 1 cut(s) 915
BshVI ATCGAT 1 cut(s) 28
BsiHKCI CYCGRG 1 cut(s) 972
BsiSI CCGG 2 cut(s) 916, 1154
BslFI GGGAC 3 cut(s) 609, 833, 1050
BslI CCNNNNNNNGG 8 cut(s) 632, 778, 1084, 1085, 1253, 1322, 1498, 1679
BsmAI GTCTC 1 cut(s) 191
BsmFI GGGAC 3 cut(s) 609, 833, 1050
BsmI GAATGC 2 cut(s) 209, 741
BsnI GGCC 5 cut(s) 293, 356, 435, 1189, 1502
BsoBI CYCGRG 1 cut(s) 972
Bsp119I TTCGAA 1 cut(s) 1605
Bsp143I GATC 4 cut(s) 496, 831, 1519, 1636
Bsp19I CCATGG 1 cut(s) 759
BspACI CCGC 2 cut(s) 229, 698
BspANI GGCC 5 cut(s) 293, 356, 435, 1189, 1502
BspCNI CTCAG 4 cut(s) 152, 195, 1282, 1336
BspDI ATCGAT 1 cut(s) 28
BspLI GGNNCC 7 cut(s) 105, 884, 933, 1076, 1197, 1313, 1534
BspPI GGATC 2 cut(s) 1527, 1631
BspT104I TTCGAA 1 cut(s) 1605
BspT107I GGYRCC 2 cut(s) 103, 1532
BspTI CTTAAG 2 cut(s) 887, 1283
BsrDI GCAATG 4 cut(s) 11, 407, 972, 1313
BsrFI RCCGGY 1 cut(s) 915
BsrI ACTGG 1 cut(s) 1190
BssAI RCCGGY 1 cut(s) 915
BssECI CCNNGG 2 cut(s) 759, 1629
BssMI GATC 4 cut(s) 496, 831, 1519, 1636
BssSI CACGAG 1 cut(s) 1658
BssT1I CCWWGG 1 cut(s) 759
Bst2BI CACGAG 1 cut(s) 1658
Bst2UI CCWGG 1 cut(s) 1200
Bst4CI ACNGT 6 cut(s) 308, 385, 730, 865, 1006, 1135
Bst6I CTCTTC 1 cut(s) 134
BstAFI CTTAAG 2 cut(s) 887, 1283
BstAPI GCANNNNNTGC 1 cut(s) 409
BstBAI YACGTR 2 cut(s) 460, 928
BstBI TTCGAA 1 cut(s) 1605
BstC8I GCNNGC 4 cut(s) 405, 805, 1147, 1614
BstDEI CTNAG 5 cut(s) 139, 182, 936, 1290, 1344
BstDSI CCRYGG 1 cut(s) 759
BstF5I GGATG 1 cut(s) 1308
BstH2I RGCGCY 1 cut(s) 537
BstHHI GCGC 2 cut(s) 536, 899
BstKTI GATC 4 cut(s) 499, 834, 1522, 1639
BstMAI GTCTC 1 cut(s) 191
BstMBI GATC 4 cut(s) 496, 831, 1519, 1636
BstMWI GCNNNNNNNGC 1 cut(s) 409
BstNI CCWGG 1 cut(s) 1200
BstNSI RCATGY 4 cut(s) 407, 470, 493, 1620
BstSCI CCNGG 2 cut(s) 1152, 1198
BstSFI CTRYAG 1 cut(s) 1513
BstV1I GCAGC 4 cut(s) 80, 707, 725, 1266
BstV2I GAAGAC 2 cut(s) 774, 946
BstX2I RGATCY 1 cut(s) 1519
BstYI RGATCY 1 cut(s) 1519
Bsu15I ATCGAT 1 cut(s) 28
BsuI GTATCC 2 cut(s) 1417, 1679
BsuRI GGCC 5 cut(s) 293, 356, 435, 1189, 1502
BsuTUI ATCGAT 1 cut(s) 28
BtgI CCRYGG 1 cut(s) 759
BtsCI GGATG 1 cut(s) 1308
BtsI GCAGTG 1 cut(s) 1563
BtsIMutI CAGTG 4 cut(s) 877, 1197, 1551, 1563
Cac8I GCNNGC 4 cut(s) 405, 805, 1147, 1614
CfoI GCGC 2 cut(s) 536, 899
Cfr10I RCCGGY 1 cut(s) 915
Cfr13I GGNCC 3 cut(s) 668, 882, 1196
ClaI ATCGAT 1 cut(s) 28
CseI GACGC 1 cut(s) 619
Csp6I GTAC 3 cut(s) 104, 1396, 1435
CspAI ACCGGT 1 cut(s) 915
CviAII CATG 8 cut(s) 371, 404, 437, 467, 490, 760, 825, 1617
CviQI GTAC 3 cut(s) 104, 1396, 1435
DdeI CTNAG 5 cut(s) 139, 182, 936, 1290, 1344
DpnI GATC 4 cut(s) 498, 833, 1521, 1638
DpnII GATC 4 cut(s) 496, 831, 1519, 1636
EaeI YGGCCR 2 cut(s) 354, 433
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
Eco130I CCWWGG 1 cut(s) 759
Eco147I AGGCCT 1 cut(s) 1502
Eco47I GGWCC 3 cut(s) 668, 882, 1196
Eco47III AGCGCT 1 cut(s) 535
Eco57I CTGAAG 3 cut(s) 264, 600, 1011
Eco88I CYCGRG 1 cut(s) 972
EcoO109I RGGNCCY 1 cut(s) 882
EcoRII CCWGG 1 cut(s) 1198
EcoT14I CCWWGG 1 cut(s) 759
EcoT22I ATGCAT 1 cut(s) 409
ErhI CCWWGG 1 cut(s) 759
FaeI CATG 8 cut(s) 374, 407, 440, 470, 493, 763, 828, 1620
FalI AAGNNNNNCTT 2 cut(s) 938, 970
FaqI GGGAC 3 cut(s) 609, 833, 1050
FatI CATG 8 cut(s) 370, 403, 436, 466, 489, 759, 824, 1616
FauI CCCGC 1 cut(s) 236
FauNDI CATATG 1 cut(s) 1268
Fnu4HI GCNGC 4 cut(s) 69, 696, 739, 1280
FokI GGATG 1 cut(s) 1315
Fsp4HI GCNGC 4 cut(s) 69, 696, 739, 1280
FspBI CTAG 3 cut(s) 65, 324, 1569
GlaI GCGC 2 cut(s) 535, 898
GluI GCNGC 4 cut(s) 69, 696, 739, 1280
GsaI CCCAGC 1 cut(s) 630
HaeII RGCGCY 1 cut(s) 537
HaeIII GGCC 5 cut(s) 293, 356, 435, 1189, 1502
HapII CCGG 2 cut(s) 916, 1154
HgaI GACGC 1 cut(s) 619
HhaI GCGC 2 cut(s) 536, 899
Hin1II CATG 8 cut(s) 374, 407, 440, 470, 493, 763, 828, 1620
Hin6I GCGC 2 cut(s) 534, 897
HinP1I GCGC 2 cut(s) 534, 897
HindIII AAGCTT 1 cut(s) 805
HpaII CCGG 2 cut(s) 916, 1154
HphI GGTGA 2 cut(s) 575, 1423
Hpy166II GTNNAC 1 cut(s) 566
Hpy188I TCNGA 8 cut(s) 244, 302, 496, 524, 962, 1225, 1345, 1351
Hpy188III TCNNGA 9 cut(s) 51, 155, 188, 485, 746, 979, 1387, 1449, 1523
Hpy8I GTNNAC 1 cut(s) 566
Hpy99I CGWCG 2 cut(s) 635, 710
HpyAV CCTTC 5 cut(s) 218, 861, 986, 1247, 1680
HpyCH4III ACNGT 6 cut(s) 308, 385, 730, 865, 1006, 1135
HpyCH4IV ACGT 3 cut(s) 459, 705, 927
HpyCH4V TGCA 8 cut(s) 4, 395, 407, 412, 695, 741, 1093, 1306
HpyF10VI GCNNNNNNNGC 1 cut(s) 409
HpyF3I CTNAG 5 cut(s) 139, 182, 936, 1290, 1344
HpySE526I ACGT 3 cut(s) 459, 705, 927
Hsp92II CATG 8 cut(s) 374, 407, 440, 470, 493, 763, 828, 1620
HspAI GCGC 2 cut(s) 534, 897
KpnI GGTACC 1 cut(s) 107
Kzo9I GATC 4 cut(s) 496, 831, 1519, 1636
LmnI GCTCC 3 cut(s) 800, 937, 1276
Lsp1109I GCAGC 4 cut(s) 80, 707, 725, 1266
LweI GCATC 2 cut(s) 703, 1293
MaeI CTAG 3 cut(s) 65, 324, 1569
MaeII ACGT 3 cut(s) 459, 705, 927
MaeIII GTNAC 9 cut(s) 84, 349, 462, 644, 724, 859, 995, 1025, 1043
MalI GATC 4 cut(s) 498, 833, 1521, 1638
MboI GATC 4 cut(s) 496, 831, 1519, 1636
MboII GAAGA 7 cut(s) 121, 491, 779, 841, 946, 1338, 1593
MflI RGATCY 1 cut(s) 1519
MlsI TGGCCA 1 cut(s) 435
MluCI AATT 9 cut(s) 168, 364, 579, 836, 1082, 1242, 1537, 1600, 1645
MluNI TGGCCA 1 cut(s) 435
MlyI GAGTC 8 cut(s) 56, 457, 554, 822, 984, 1212, 1355, 1465
MmeI TCCRAC 1 cut(s) 1329
Mox20I TGGCCA 1 cut(s) 435
Mph1103I ATGCAT 1 cut(s) 409
MroXI GAANNNNTTC 3 cut(s) 207, 249, 1649
MscI TGGCCA 1 cut(s) 435
MseI TTAA 4 cut(s) 95, 516, 888, 1284
MslI CAYNNNNRTG 1 cut(s) 651
Msp20I TGGCCA 1 cut(s) 435
MspA1I CMGCKG 1 cut(s) 698
MspCI CTTAAG 2 cut(s) 887, 1283
MspI CCGG 2 cut(s) 916, 1154
MspR9I CCNGG 2 cut(s) 1154, 1200
Mva1269I GAATGC 2 cut(s) 209, 741
MvaI CCWGG 1 cut(s) 1200
MwoI GCNNNNNNNGC 1 cut(s) 409
NciI CCSGG 1 cut(s) 1154
NcoI CCATGG 1 cut(s) 759
NdeI CATATG 1 cut(s) 1268
NdeII GATC 4 cut(s) 496, 831, 1519, 1636
NlaIII CATG 8 cut(s) 374, 407, 440, 470, 493, 763, 828, 1620
NlaIV GGNNCC 7 cut(s) 105, 884, 933, 1076, 1197, 1313, 1534
NmeAIII GCCGAG 1 cut(s) 1654
NmuCI GTSAC 5 cut(s) 84, 462, 644, 1025, 1043
NsiI ATGCAT 1 cut(s) 409
NspI RCATGY 4 cut(s) 407, 470, 493, 1620
NspV TTCGAA 1 cut(s) 1605
OliI CACNNNNGTG 1 cut(s) 651
PaeI GCATGC 1 cut(s) 407
PaeR7I CTCGAG 1 cut(s) 972
PceI AGGCCT 1 cut(s) 1502
PciI ACATGT 2 cut(s) 466, 489
PctI GAATGC 2 cut(s) 209, 741
PdmI GAANNNNTTC 3 cut(s) 207, 249, 1649
PfeI GAWTC 5 cut(s) 158, 218, 1127, 1262, 1390
PflMI CCANNNNNTGG 1 cut(s) 1679
PfoI TCCNGGA 1 cut(s) 1198
PinAI ACCGGT 1 cut(s) 915
PkrI GCNGC 4 cut(s) 70, 697, 740, 1281
PleI GAGTC 8 cut(s) 55, 456, 553, 821, 983, 1211, 1354, 1465
PpsI GAGTC 8 cut(s) 55, 456, 553, 821, 983, 1211, 1354, 1465
Ppu21I YACGTR 2 cut(s) 460, 928
PpuMI RGGWCCY 1 cut(s) 882
PscI ACATGT 2 cut(s) 466, 489
PshBI ATTAAT 1 cut(s) 516
PsiI TTATAA 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 882
Psp6I CCWGG 1 cut(s) 1198
PspFI CCCAGC 1 cut(s) 626
PspGI CCWGG 1 cut(s) 1198
PspN4I GGNNCC 7 cut(s) 105, 884, 933, 1076, 1197, 1313, 1534
PspPI GGNCC 3 cut(s) 668, 882, 1196
PspPPI RGGWCCY 1 cut(s) 882
PspXI VCTCGAGB 1 cut(s) 972
PsuI RGATCY 1 cut(s) 1519
RsaI GTAC 3 cut(s) 105, 1397, 1436
RsaNI GTAC 3 cut(s) 104, 1396, 1435
RseI CAYNNNNRTG 1 cut(s) 651
SaqAI TTAA 4 cut(s) 95, 516, 888, 1284
SatI GCNGC 4 cut(s) 69, 696, 739, 1280
Sau3AI GATC 4 cut(s) 496, 831, 1519, 1636
Sau96I GGNCC 3 cut(s) 668, 882, 1196
ScaI AGTACT 1 cut(s) 1397
SchI GAGTC 8 cut(s) 56, 457, 554, 822, 984, 1212, 1355, 1465
ScrFI CCNGG 2 cut(s) 1154, 1200
SfaNI GCATC 2 cut(s) 703, 1293
SfcI CTRYAG 1 cut(s) 1513
Sfr274I CTCGAG 1 cut(s) 972
SfuI TTCGAA 1 cut(s) 1605
SinI GGWCC 3 cut(s) 668, 882, 1196
SlaI CTCGAG 1 cut(s) 972
SmiMI CAYNNNNRTG 1 cut(s) 651
SmlI CTYRAG 3 cut(s) 887, 972, 1283
SmoI CTYRAG 3 cut(s) 887, 972, 1283
SphI GCATGC 1 cut(s) 407
Sse9I AATT 9 cut(s) 168, 364, 579, 836, 1082, 1242, 1537, 1600, 1645
SseBI AGGCCT 1 cut(s) 1502
SsiI CCGC 2 cut(s) 229, 698
SspMI CTAG 3 cut(s) 65, 324, 1569
StuI AGGCCT 1 cut(s) 1502
StyD4I CCNGG 2 cut(s) 1152, 1198
StyI CCWWGG 1 cut(s) 759
TaaI ACNGT 6 cut(s) 308, 385, 730, 865, 1006, 1135
TaiI ACGT 3 cut(s) 462, 708, 930
TaqI TCGA 8 cut(s) 28, 50, 75, 189, 201, 973, 1130, 1605
TasI AATT 9 cut(s) 168, 364, 579, 836, 1082, 1242, 1537, 1600, 1645
TatI WGTACW 1 cut(s) 1395
TfiI GAWTC 5 cut(s) 158, 218, 1127, 1262, 1390
Tru1I TTAA 4 cut(s) 95, 516, 888, 1284
Tru9I TTAA 4 cut(s) 95, 516, 888, 1284
TscAI CASTG 4 cut(s) 877, 1197, 1558, 1570
TseFI GTSAC 5 cut(s) 84, 462, 644, 1025, 1043
TseI GCWGC 4 cut(s) 68, 695, 738, 1279
Tsp45I GTSAC 5 cut(s) 84, 462, 644, 1025, 1043
TspGWI ACGGA 2 cut(s) 1289, 1436
TspRI CASTG 4 cut(s) 877, 1197, 1558, 1570
Van91I CCANNNNNTGG 1 cut(s) 1679
Vha464I CTTAAG 2 cut(s) 887, 1283
VpaK11BI GGWCC 3 cut(s) 668, 882, 1196
VspI ATTAAT 1 cut(s) 516
XapI RAATTY 1 cut(s) 1645
XceI RCATGY 4 cut(s) 407, 470, 493, 1620
XhoI CTCGAG 1 cut(s) 972
XmnI GAANNNNTTC 3 cut(s) 207, 249, 1649
XspI CTAG 3 cut(s) 65, 324, 1569
ZrmI AGTACT 1 cut(s) 1397
Zsp2I ATGCAT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.