Rorug05G0039300

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000956
Physical Location & Seq
Reverse (-)
3362101 .. 3375509
13409 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0039300.1

Sequence Viewer

Length: 2205 bp
ATGCAAATGGGTATTAGAGCAAAAAATATTAGTGCTTTAGGTTCCTCTAGGCTGTTCCTGTTCTTCTTCAGCTCGCTTCTGTCACAGCATTGTTGTGCTGAAGTACTGTATGAGATAAATCCTTCACACTCTTTATCACAGGGACAAATTCTAGTCTCCCCTGGTAGGATTTTTGAATTGGGTTTCTTCAGTCCTAGTGACTCTGCTAACAAGTATGTGGGGATATGGCACAAGAATATACTACCCCGTAAAGTTGTGTGGGTGGCCAACAGGGAAAGGCCTCTTGCAGTTACAGGCTCATTGGCGAGTTTGAGAATTAGCAGCAATGGGAGTCTGGAGCTTGTAGACGGGAAGCTGAACTCTGTGTGGTCAACCAATGTTACTATACAGGTTTCATCATCTAATACTAGTTCAGTTGCTGCAGTTCTTTCAGATGATGGAAACTTTGTTGTCAAAGGAGCTGGTGAATCAGTATGGCAGAGCTTTGATTATCCTGGTGACACTATGCTACCAACCCAGCGGCTTGGATACAATACTAAATCTAAAAAGGGACGTTTCTTGACTGCCTGGAAAAGTGAGAGTGATCCATCTAGTGGGATATATACAGTTGAAGGCGGACGGGCAGCAGAGACGCCAGCACAAGTGATCATTTGGATTAATCGATCAACTCCCTTCTGGAGAAGTGGGCCATGGGATAAATCAAAGTTCATTGGCCTGCCAGATATGGATGATGGATATCTTAGTGGATTTAAAGGAGAAGAGAATGTAGAACAGGGAACACAGGATTTCTCTTATGAATTATTTGGCAATCTCGCAGCATATCTAGACGTCTCTTCACAGGGAAAGTTGAAGCTCATGTATGCAAGGAATGGTAGCAACTGGTCAGTCTACTGCGATGCACAGAAGAATCCATGTGACATCTATGGAGCATGTGGGCCTTATGGGGTCTGCAACGTTTCTGAATCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTGTCAAAGCCAGACCAGGAATGGAGCAAAGGAGACTGGACCAGTGGGTGCGTAAGGAAAACCGAATTGTTCTGTGAGAGACAAACAAATAAGAAGTCAGTACCATTGCAAGGAAAACAAGATGATAATGATGATGGGTTTTGGAAGATCACACGGGCGAAAGTACCAGATTATCATCAGTACATTACATCTTTGAATCTTGAAGACGAGTTCAATGACTGCAAGATACAGTGCCTAAATAATTGTTCATGCCTGGCTTATGCACATGTTAATAATATTGGGTGTTTGGTCTGGTCCAAAGACCTTATTGATATACAGGAATTTTCCAAGGGGGGAGTTGATATTTATATTCGCCTTGCACGCAAAGAATTAGGTGAAGAAAAGCCAATTAAGTTGATTGCCAGCCTTACAGCTATTGGTTTAGTGATTATCTTGGTTGCCATAGTGTTTGGTTTGCACAGGTTTCGAGCTAACCAAAAGGAATCGATTCCATCTTCTAGAGACACTCTTCGAATATATATTGGAAAACATGATCCATCAGAGCTATTGATATATGATTTTGATACCATATTAACTGCTACAGACAATTTCAGTGTTACAAACAAACTCGGGCAAGGAGGCTTTGGTCCTGTTTATAAGGGGATGCTACAAGATGCAAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAATCTTCAACACAAAAATCTTGTTAGGATGATGGGTTGCTGCATTAAAGAGGATGAGAAGTTACTTGTTTATGAGTTCATGCCAAACAAAAGCTTGGATACGTTTCTATTCGATCCGATGAGGAGAGGAGAGCTTGATTGGGATAGACGCTTTAATATTATTCAGGGTGTTACTAGAGGACTTCTTTATCTCCATTATGATTCCTATGTGAAGGTAATACATAGAGATCTGAAAGTCAGCAATATTCTCCTGGATGGGAAAATGAACCCAAAAATTTCAGATTTTGGATTGGCACGCATAGATGAAGGATCACCGTGTCTAGAAAATACTCAGAAGGTTGTGGGGACACGTGGCTATATGTCTCCGGAGTATGCCATGGGTGGGATATTTTCTGAAAAATCTGATGTCTATAGCTTCAGAGTATTGGTATTGGAGATTATTAGCAGCAAGAAGACCAACTTTTTTTTTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BBE FAD_binding_4

Protein Analysis

734

Amino Acids

82.16

Weight (kDa)

7.74

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 191 5.5e-28 D-mannose binding lectin
S_locus_glycop PF00954 226 - 334 5.5e-26 S-locus glycoprotein domain
PAN_2 PF08276 374 - 436 1.2e-15 PAN-like domain
Pkinase PF00069 529 - 727 3.4e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 530 - 728 7.6e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1629
AatII GACGTC 1 cut(s) 831
AccB7I CCANNNNNTGG 1 cut(s) 593
AccI GTMKAC 2 cut(s) 345, 888
AccIII TCCGGA 1 cut(s) 2095
AciI CCGC 2 cut(s) 520, 615
AclI AACGTT 1 cut(s) 954
AclWI GGATC 4 cut(s) 578, 1520, 1838, 2047
AcoI YGGCCR 1 cut(s) 264
AcsI RAATTY 3 cut(s) 147, 1313, 2004
AcuI CTGAAG 4 cut(s) 52, 120, 172, 2131
AcvI CACGTG 1 cut(s) 2081
AcyI GRCGYC 2 cut(s) 632, 828
AfaI GTAC 4 cut(s) 105, 1095, 1158, 1175
AfiI CCNNNNNNNGG 4 cut(s) 165, 593, 1103, 2112
AflIII ACRYGT 2 cut(s) 1258, 2078
AhlI ACTAGT 1 cut(s) 407
AjnI CCWGG 6 cut(s) 160, 493, 566, 1008, 1245, 1980
Alw26I GTCTC 7 cut(s) 160, 623, 835, 1020, 1066, 1488, 2097
AlwI GGATC 4 cut(s) 578, 1520, 1838, 2047
AlwNI CAGNNNCTG 1 cut(s) 419
Ama87I CYCGRG 1 cut(s) 1601
Aor13HI TCCGGA 1 cut(s) 2095
AoxI GGCC 5 cut(s) 264, 278, 686, 712, 935
ApeKI GCWGC 6 cut(s) 321, 419, 623, 815, 1770, 2175
ApoI RAATTY 3 cut(s) 147, 1313, 2004
ArsI GACNNNNNNTTYG 2 cut(s) 1073, 1105
AseI ATTAAT 1 cut(s) 657
Asp700I GAANNNNTTC 1 cut(s) 1479
AspS9I GGNCC 5 cut(s) 686, 935, 1032, 1287, 1619
AsuHPI GGTGA 4 cut(s) 476, 509, 1379, 2034
AsuII TTCGAA 1 cut(s) 1504
AvaI CYCGRG 1 cut(s) 1601
AvaII GGWCC 3 cut(s) 1032, 1287, 1619
BalI TGGCCA 1 cut(s) 266
BbrPI CACGTG 1 cut(s) 2081
BbsI GAAGAC 2 cut(s) 1203, 2189
BbvI GCAGC 6 cut(s) 333, 406, 635, 827, 1757, 2187
BccI CCATC 8 cut(s) 431, 595, 725, 1121, 1492, 1537, 1756, 1979
BcgI CGANNNNNNTGC 2 cut(s) 1439, 1473
BciT130I CCWGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
BciVI GTATCC 2 cut(s) 521, 1822
BclI TGATCA 1 cut(s) 645
BcoDI GTCTC 7 cut(s) 160, 623, 835, 1020, 1066, 1488, 2097
BcuI ACTAGT 1 cut(s) 407
BfmI CTRYAG 3 cut(s) 420, 1572, 2140
BfuI GTATCC 2 cut(s) 521, 1822
BglII AGATCT 1 cut(s) 1957
BisI GCNGC 7 cut(s) 322, 420, 521, 624, 816, 1771, 2176
BlsI GCNGC 7 cut(s) 323, 421, 522, 625, 817, 1772, 2177
BmcAI AGTACT 1 cut(s) 105
Bme1390I CCNGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
Bme18I GGWCC 3 cut(s) 1032, 1287, 1619
BmeT110I CYCGRG 1 cut(s) 1601
BmgT120I GGNCC 5 cut(s) 686, 935, 1032, 1287, 1619
BmiI GGNNCC 1 cut(s) 43
BmrFI CCNGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
BmsI GCATC 4 cut(s) 886, 1626, 1636, 1707
BpiI GAAGAC 2 cut(s) 1203, 2189
BpmI CTGGAG 2 cut(s) 356, 697
Bpu10I CCTNAGC 1 cut(s) 1684
Bpu14I TTCGAA 1 cut(s) 1504
Bsa29I ATCGAT 2 cut(s) 661, 1478
BsaAI YACGTR 1 cut(s) 2081
BsaBI GATNNNNATC 2 cut(s) 735, 1167
BsaHI GRCGYC 2 cut(s) 632, 828
BsaJI CCNNGG 4 cut(s) 160, 689, 1320, 2106
BsaWI WCCGGW 1 cut(s) 2095
Bsc4I CCNNNNNNNGG 4 cut(s) 165, 593, 1103, 2112
Bse1I ACTGG 3 cut(s) 884, 1034, 1035
Bse3DI GCAATG 2 cut(s) 331, 1097
Bse8I GATNNNNATC 2 cut(s) 735, 1167
BseAI TCCGGA 1 cut(s) 2095
BseBI CCWGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
BseCI ATCGAT 2 cut(s) 661, 1478
BseDI CCNNGG 4 cut(s) 160, 689, 1320, 2106
BseGI GGATG 5 cut(s) 733, 1641, 1764, 1789, 1990
BseJI GATNNNNATC 2 cut(s) 735, 1167
BseLI CCNNNNNNNGG 4 cut(s) 165, 593, 1103, 2112
BseMI GCAATG 2 cut(s) 331, 1097
BseMII CTCAG 2 cut(s) 1698, 2075
BseNI ACTGG 3 cut(s) 884, 1034, 1035
BseRI GAGGAG 2 cut(s) 1867, 1872
BseXI GCAGC 6 cut(s) 333, 406, 635, 827, 1757, 2187
BseYI CCCAGC 1 cut(s) 516
BshFI GGCC 5 cut(s) 266, 280, 688, 714, 937
BshVI ATCGAT 2 cut(s) 661, 1478
BsiHKCI CYCGRG 1 cut(s) 1601
BsiSI CCGG 1 cut(s) 2096
BslFI GGGAC 3 cut(s) 156, 564, 2089
BslI CCNNNNNNNGG 4 cut(s) 165, 593, 1103, 2112
BsmAI GTCTC 7 cut(s) 160, 623, 835, 1020, 1066, 1488, 2097
BsmBI CGTCTC 2 cut(s) 623, 835
BsmFI GGGAC 3 cut(s) 156, 564, 2089
BsnI GGCC 5 cut(s) 266, 280, 688, 714, 937
BsoBI CYCGRG 1 cut(s) 1601
Bsp119I TTCGAA 1 cut(s) 1504
Bsp13I TCCGGA 1 cut(s) 2095
Bsp143I GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
Bsp19I CCATGG 2 cut(s) 689, 2106
BspACI CCGC 2 cut(s) 520, 615
BspANI GGCC 5 cut(s) 266, 280, 688, 714, 937
BspCNI CTCAG 2 cut(s) 1697, 2074
BspDI ATCGAT 2 cut(s) 661, 1478
BspEI TCCGGA 1 cut(s) 2095
BspLI GGNNCC 1 cut(s) 43
BspMAI CTGCAG 1 cut(s) 424
BspPI GGATC 4 cut(s) 578, 1520, 1838, 2047
BspT104I TTCGAA 1 cut(s) 1504
BsrDI GCAATG 2 cut(s) 331, 1097
BsrI ACTGG 3 cut(s) 884, 1034, 1035
BssECI CCNNGG 4 cut(s) 160, 689, 1320, 2106
BssMI GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
BssNI GRCGYC 2 cut(s) 632, 828
BssT1I CCWWGG 3 cut(s) 689, 1320, 2106
Bst2UI CCWGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
Bst4CI ACNGT 4 cut(s) 108, 607, 1224, 2046
Bst6I CTCTTC 4 cut(s) 753, 838, 1506, 1695
BstACI GRCGYC 2 cut(s) 632, 828
BstBAI YACGTR 1 cut(s) 2081
BstBI TTCGAA 1 cut(s) 1504
BstC8I GCNNGC 6 cut(s) 74, 636, 716, 1354, 1396, 2026
BstDEI CTNAG 3 cut(s) 740, 1684, 2061
BstDSI CCRYGG 2 cut(s) 689, 2106
BstF5I GGATG 5 cut(s) 733, 1641, 1764, 1789, 1990
BstKTI GATC 9 cut(s) 586, 648, 665, 1143, 1528, 1728, 1846, 1960, 2042
BstMAI GTCTC 7 cut(s) 160, 623, 835, 1020, 1066, 1488, 2097
BstMBI GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
BstMWI GCNNNNNNNGC 1 cut(s) 1353
BstNI CCWGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
BstNSI RCATGY 2 cut(s) 933, 1262
BstSCI CCNGG 6 cut(s) 160, 493, 566, 1008, 1245, 1980
BstSFI CTRYAG 3 cut(s) 420, 1572, 2140
BstV1I GCAGC 6 cut(s) 333, 406, 635, 827, 1757, 2187
BstV2I GAAGAC 2 cut(s) 1203, 2189
BstX2I RGATCY 1 cut(s) 1957
BstXI CCANNNNNNTGG 1 cut(s) 524
BstYI RGATCY 1 cut(s) 1957
Bsu15I ATCGAT 2 cut(s) 661, 1478
BsuI GTATCC 2 cut(s) 521, 1822
BsuRI GGCC 5 cut(s) 266, 280, 688, 714, 937
BsuTUI ATCGAT 2 cut(s) 661, 1478
BtgI CCRYGG 2 cut(s) 689, 2106
BtgZI GCGATG 1 cut(s) 909
BtsCI GGATG 5 cut(s) 733, 1641, 1764, 1789, 1990
BtsIMutI CAGTG 3 cut(s) 1042, 1229, 1591
Cac8I GCNNGC 6 cut(s) 74, 636, 716, 1354, 1396, 2026
CaiI CAGNNNCTG 1 cut(s) 419
Cfr13I GGNCC 5 cut(s) 686, 935, 1032, 1287, 1619
ClaI ATCGAT 2 cut(s) 661, 1478
CseI GACGC 2 cut(s) 640, 1887
Csp6I GTAC 4 cut(s) 104, 1094, 1157, 1174
CviAII CATG 9 cut(s) 690, 856, 912, 930, 1242, 1259, 1523, 1810, 2107
CviQI GTAC 4 cut(s) 104, 1094, 1157, 1174
DdeI CTNAG 3 cut(s) 740, 1684, 2061
DpnI GATC 9 cut(s) 585, 647, 664, 1142, 1527, 1727, 1845, 1959, 2041
DpnII GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
DraI TTTAAA 1 cut(s) 751
EaeI YGGCCR 1 cut(s) 264
Eam1104I CTCTTC 4 cut(s) 753, 838, 1506, 1695
EarI CTCTTC 4 cut(s) 753, 838, 1506, 1695
EciI GGCGGA 1 cut(s) 630
Eco130I CCWWGG 3 cut(s) 689, 1320, 2106
Eco147I AGGCCT 1 cut(s) 280
Eco32I GATATC 1 cut(s) 737
Eco47I GGWCC 3 cut(s) 1032, 1287, 1619
Eco57I CTGAAG 4 cut(s) 52, 120, 172, 2131
Eco72I CACGTG 1 cut(s) 2081
Eco88I CYCGRG 1 cut(s) 1601
EcoRII CCWGG 6 cut(s) 160, 493, 566, 1008, 1245, 1980
EcoRV GATATC 1 cut(s) 737
EcoT14I CCWWGG 3 cut(s) 689, 1320, 2106
ErhI CCWWGG 3 cut(s) 689, 1320, 2106
Esp3I CGTCTC 2 cut(s) 623, 835
FaeI CATG 9 cut(s) 693, 859, 915, 933, 1245, 1262, 1526, 1813, 2110
FalI AAGNNNNNCTT 1 cut(s) 2174
FaqI GGGAC 3 cut(s) 156, 564, 2089
FatI CATG 9 cut(s) 689, 855, 911, 929, 1241, 1258, 1522, 1809, 2106
FbaI TGATCA 1 cut(s) 645
FblI GTMKAC 2 cut(s) 345, 888
Fnu4HI GCNGC 7 cut(s) 322, 420, 521, 624, 816, 1771, 2176
FokI GGATG 5 cut(s) 740, 1648, 1771, 1796, 1997
Fsp4HI GCNGC 7 cut(s) 322, 420, 521, 624, 816, 1771, 2176
GluI GCNGC 7 cut(s) 322, 420, 521, 624, 816, 1771, 2176
GsaI CCCAGC 1 cut(s) 520
GsuI CTGGAG 2 cut(s) 356, 697
HaeIII GGCC 5 cut(s) 266, 280, 688, 714, 937
HapII CCGG 1 cut(s) 2096
HgaI GACGC 2 cut(s) 640, 1887
Hin1I GRCGYC 2 cut(s) 632, 828
Hin1II CATG 9 cut(s) 693, 859, 915, 933, 1245, 1262, 1526, 1813, 2110
HincII GTYRAC 1 cut(s) 372
HindII GTYRAC 1 cut(s) 372
HindIII AAGCTT 1 cut(s) 1822
HinfI GANTC 9 cut(s) 200, 331, 467, 907, 962, 1189, 1475, 1480, 1931
HpaII CCGG 1 cut(s) 2096
HphI GGTGA 4 cut(s) 476, 509, 1379, 2034
Hpy166II GTNNAC 3 cut(s) 346, 372, 889
Hpy8I GTNNAC 3 cut(s) 346, 372, 889
HpyAV CCTTC 6 cut(s) 132, 605, 682, 1936, 2030, 2059
HpyCH4III ACNGT 4 cut(s) 108, 607, 1224, 2046
HpyCH4IV ACGT 5 cut(s) 553, 828, 954, 1832, 2080
HpyF10VI GCNNNNNNNGC 1 cut(s) 1353
HpyF3I CTNAG 3 cut(s) 740, 1684, 2061
HpySE526I ACGT 5 cut(s) 553, 828, 954, 1832, 2080
Hsp92I GRCGYC 2 cut(s) 632, 828
Hsp92II CATG 9 cut(s) 693, 859, 915, 933, 1245, 1262, 1526, 1813, 2110
Kpn2I TCCGGA 1 cut(s) 2095
Ksp22I TGATCA 1 cut(s) 645
Kzo9I GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
LmnI GCTCC 4 cut(s) 337, 458, 926, 1017
Lsp1109I GCAGC 6 cut(s) 333, 406, 635, 827, 1757, 2187
LweI GCATC 4 cut(s) 886, 1626, 1636, 1707
MaeII ACGT 5 cut(s) 553, 828, 954, 1832, 2080
MaeIII GTNAC 9 cut(s) 81, 197, 289, 379, 497, 914, 1588, 1791, 1900
MalI GATC 9 cut(s) 585, 647, 664, 1142, 1527, 1727, 1845, 1959, 2041
MboI GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
MflI RGATCY 1 cut(s) 1957
MlsI TGGCCA 1 cut(s) 266
MluNI TGGCCA 1 cut(s) 266
MlyI GAGTC 2 cut(s) 194, 340
MnlI CCTC 7 cut(s) 55, 291, 1604, 1774, 1845, 1850, 1901
Mox20I TGGCCA 1 cut(s) 266
MroI TCCGGA 1 cut(s) 2095
MroXI GAANNNNTTC 1 cut(s) 1479
MscI TGGCCA 1 cut(s) 266
MseI TTAA 7 cut(s) 657, 750, 1263, 1383, 1565, 1776, 1884
MslI CAYNNNNRTG 1 cut(s) 93
Msp20I TGGCCA 1 cut(s) 266
MspA1I CMGCKG 1 cut(s) 520
MspI CCGG 1 cut(s) 2096
MspR9I CCNGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
MvaI CCWGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
MwoI GCNNNNNNNGC 1 cut(s) 1353
NcoI CCATGG 2 cut(s) 689, 2106
NdeII GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
NlaIII CATG 9 cut(s) 693, 859, 915, 933, 1245, 1262, 1526, 1813, 2110
NlaIV GGNNCC 1 cut(s) 43
NmuCI GTSAC 4 cut(s) 81, 197, 497, 914
NspI RCATGY 2 cut(s) 933, 1262
NspV TTCGAA 1 cut(s) 1504
PceI AGGCCT 1 cut(s) 280
PciI ACATGT 1 cut(s) 1258
PdmI GAANNNNTTC 1 cut(s) 1479
PfeI GAWTC 7 cut(s) 467, 907, 962, 1189, 1475, 1480, 1931
PflMI CCANNNNNTGG 1 cut(s) 593
PfoI TCCNGGA 1 cut(s) 1980
PkrI GCNGC 7 cut(s) 323, 421, 522, 625, 817, 1772, 2177
PleI GAGTC 2 cut(s) 194, 339
PmaCI CACGTG 1 cut(s) 2081
PmlI CACGTG 1 cut(s) 2081
PpsI GAGTC 2 cut(s) 194, 339
Ppu21I YACGTR 1 cut(s) 2081
PscI ACATGT 1 cut(s) 1258
PshBI ATTAAT 1 cut(s) 657
PsiI TTATAA 1 cut(s) 1629
Psp1406I AACGTT 1 cut(s) 954
Psp6I CCWGG 6 cut(s) 160, 493, 566, 1008, 1245, 1980
PspCI CACGTG 1 cut(s) 2081
PspFI CCCAGC 1 cut(s) 516
PspGI CCWGG 6 cut(s) 160, 493, 566, 1008, 1245, 1980
PspN4I GGNNCC 1 cut(s) 43
PspPI GGNCC 5 cut(s) 686, 935, 1032, 1287, 1619
PstI CTGCAG 1 cut(s) 424
PstNI CAGNNNCTG 1 cut(s) 419
PsuI RGATCY 1 cut(s) 1957
RsaI GTAC 4 cut(s) 105, 1095, 1158, 1175
RsaNI GTAC 4 cut(s) 104, 1094, 1157, 1174
RseI CAYNNNNRTG 1 cut(s) 93
SaqAI TTAA 7 cut(s) 657, 750, 1263, 1383, 1565, 1776, 1884
SatI GCNGC 7 cut(s) 322, 420, 521, 624, 816, 1771, 2176
Sau3AI GATC 9 cut(s) 583, 645, 662, 1140, 1525, 1725, 1843, 1957, 2039
Sau96I GGNCC 5 cut(s) 686, 935, 1032, 1287, 1619
ScaI AGTACT 1 cut(s) 105
SchI GAGTC 2 cut(s) 194, 340
ScrFI CCNGG 6 cut(s) 162, 495, 568, 1010, 1247, 1982
SfaNI GCATC 4 cut(s) 886, 1626, 1636, 1707
SfcI CTRYAG 3 cut(s) 420, 1572, 2140
SfuI TTCGAA 1 cut(s) 1504
SinI GGWCC 3 cut(s) 1032, 1287, 1619
SmiMI CAYNNNNRTG 1 cut(s) 93
SpeI ACTAGT 1 cut(s) 407
SseBI AGGCCT 1 cut(s) 280
SsiI CCGC 2 cut(s) 520, 615
SspI AATATT 4 cut(s) 28, 1270, 1888, 1975
StuI AGGCCT 1 cut(s) 280
StyD4I CCNGG 6 cut(s) 160, 493, 566, 1008, 1245, 1980
StyI CCWWGG 3 cut(s) 689, 1320, 2106
TaaI ACNGT 4 cut(s) 108, 607, 1224, 2046
TaiI ACGT 5 cut(s) 556, 831, 957, 1835, 2083
TaqI TCGA 5 cut(s) 661, 1459, 1478, 1504, 1842
TatI WGTACW 2 cut(s) 103, 1173
TauI GCSGC 1 cut(s) 523
TfiI GAWTC 7 cut(s) 467, 907, 962, 1189, 1475, 1480, 1931
Tru1I TTAA 7 cut(s) 657, 750, 1263, 1383, 1565, 1776, 1884
Tru9I TTAA 7 cut(s) 657, 750, 1263, 1383, 1565, 1776, 1884
TscAI CASTG 3 cut(s) 1042, 1229, 1591
TseFI GTSAC 4 cut(s) 81, 197, 497, 914
TseI GCWGC 6 cut(s) 321, 419, 623, 815, 1770, 2175
Tsp45I GTSAC 4 cut(s) 81, 197, 497, 914
TspDTI ATGAA 7 cut(s) 384, 697, 810, 1230, 1798, 2009, 2049
TspRI CASTG 3 cut(s) 1042, 1229, 1591
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 3 cut(s) 1032, 1287, 1619
VspI ATTAAT 1 cut(s) 657
XapI RAATTY 3 cut(s) 147, 1313, 2004
XbaI TCTAGA 3 cut(s) 823, 1490, 2050
XceI RCATGY 2 cut(s) 933, 1262
XcmI CCANNNNNNNNNTGG 1 cut(s) 1011
XmiI GTMKAC 2 cut(s) 345, 888
XmnI GAANNNNTTC 1 cut(s) 1479
ZraI GACGTC 1 cut(s) 829
ZrmI AGTACT 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.