ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 48 |
| AccI | GTMKAC | 1 cut(s) | 605 |
| AciI | CCGC | 1 cut(s) | 91 |
| AcoI | YGGCCR | 1 cut(s) | 512 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 48, 309, 310 |
| AgsI | TTSAA | 5 cut(s) | 121, 140, 157, 442, 527 |
| AjnI | CCWGG | 1 cut(s) | 41 |
| AleI | CACNNNNGTG | 1 cut(s) | 637 |
| AluBI | AGCT | 4 cut(s) | 285, 329, 507, 557 |
| AluI | AGCT | 4 cut(s) | 285, 329, 507, 557 |
| AoxI | GGCC | 1 cut(s) | 512 |
| ApeKI | GCWGC | 1 cut(s) | 329 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 531 |
| AspS9I | GGNCC | 2 cut(s) | 279, 300 |
| AvaII | GGWCC | 2 cut(s) | 279, 300 |
| BalI | TGGCCA | 1 cut(s) | 514 |
| BbvI | GCAGC | 1 cut(s) | 316 |
| BccI | CCATC | 2 cut(s) | 350, 467 |
| BciT130I | CCWGG | 1 cut(s) | 43 |
| BfaI | CTAG | 1 cut(s) | 131 |
| BisI | GCNGC | 1 cut(s) | 330 |
| BlsI | GCNGC | 1 cut(s) | 331 |
| Bme1390I | CCNGG | 1 cut(s) | 43 |
| Bme18I | GGWCC | 2 cut(s) | 279, 300 |
| BmgT120I | GGNCC | 2 cut(s) | 279, 300 |
| BmiI | GGNNCC | 1 cut(s) | 302 |
| BmrFI | CCNGG | 1 cut(s) | 43 |
| BmsI | GCATC | 1 cut(s) | 373 |
| BsaBI | GATNNNNATC | 1 cut(s) | 156 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 48, 309, 310 |
| Bse8I | GATNNNNATC | 1 cut(s) | 156 |
| BseBI | CCWGG | 1 cut(s) | 43 |
| BseGI | GGATG | 3 cut(s) | 361, 388, 478 |
| BseJI | GATNNNNATC | 1 cut(s) | 156 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 48, 309, 310 |
| BseXI | GCAGC | 1 cut(s) | 316 |
| BsgI | GTGCAG | 1 cut(s) | 249 |
| BshFI | GGCC | 1 cut(s) | 514 |
| BslFI | GGGAC | 1 cut(s) | 286 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 48, 309, 310 |
| BsmFI | GGGAC | 1 cut(s) | 286 |
| BsnI | GGCC | 1 cut(s) | 514 |
| BspACI | CCGC | 1 cut(s) | 91 |
| BspANI | GGCC | 1 cut(s) | 514 |
| BspLI | GGNNCC | 1 cut(s) | 302 |
| BssNAI | GTATAC | 1 cut(s) | 606 |
| Bst1107I | GTATAC | 1 cut(s) | 606 |
| Bst2UI | CCWGG | 1 cut(s) | 43 |
| Bst4CI | ACNGT | 3 cut(s) | 469, 610, 654 |
| Bst6I | CTCTTC | 2 cut(s) | 204, 261 |
| BstF5I | GGATG | 3 cut(s) | 361, 388, 478 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 170 |
| BstNI | CCWGG | 1 cut(s) | 43 |
| BstSCI | CCNGG | 1 cut(s) | 41 |
| BstV1I | GCAGC | 1 cut(s) | 316 |
| BstZ17I | GTATAC | 1 cut(s) | 606 |
| BsuRI | GGCC | 1 cut(s) | 514 |
| BtsCI | GGATG | 3 cut(s) | 361, 388, 478 |
| BtsIMutI | CAGTG | 1 cut(s) | 287 |
| Cfr13I | GGNCC | 2 cut(s) | 279, 300 |
| CviAII | CATG | 2 cut(s) | 20, 596 |
| CviJI | RGCY | 9 cut(s) | 18, 41, 130, 135, 285, 329, 507, 514, 557 |
| CviKI_1 | RGCY | 9 cut(s) | 18, 41, 130, 135, 285, 329, 507, 514, 557 |
| EaeI | YGGCCR | 1 cut(s) | 512 |
| Eam1104I | CTCTTC | 2 cut(s) | 204, 261 |
| EarI | CTCTTC | 2 cut(s) | 204, 261 |
| Eco32I | GATATC | 1 cut(s) | 623 |
| Eco47I | GGWCC | 2 cut(s) | 279, 300 |
| EcoO109I | RGGNCCY | 1 cut(s) | 300 |
| EcoRII | CCWGG | 1 cut(s) | 41 |
| EcoRV | GATATC | 1 cut(s) | 623 |
| FaeI | CATG | 2 cut(s) | 23, 599 |
| FaqI | GGGAC | 1 cut(s) | 286 |
| FatI | CATG | 2 cut(s) | 19, 595 |
| FblI | GTMKAC | 1 cut(s) | 605 |
| Fnu4HI | GCNGC | 1 cut(s) | 330 |
| FokI | GGATG | 3 cut(s) | 368, 395, 485 |
| Fsp4HI | GCNGC | 1 cut(s) | 330 |
| FspBI | CTAG | 1 cut(s) | 131 |
| GluI | GCNGC | 1 cut(s) | 330 |
| HaeIII | GGCC | 1 cut(s) | 514 |
| Hin1II | CATG | 2 cut(s) | 23, 599 |
| HinfI | GANTC | 2 cut(s) | 98, 391 |
| Hpy166II | GTNNAC | 3 cut(s) | 71, 338, 606 |
| Hpy188III | TCNNGA | 4 cut(s) | 140, 274, 380, 613 |
| Hpy8I | GTNNAC | 3 cut(s) | 71, 338, 606 |
| HpyAV | CCTTC | 1 cut(s) | 309 |
| HpyCH4III | ACNGT | 3 cut(s) | 469, 610, 654 |
| HpyCH4IV | ACGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 3 cut(s) | 108, 266, 642 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 170 |
| HpySE526I | ACGT | 1 cut(s) | 73 |
| Hsp92II | CATG | 2 cut(s) | 23, 599 |
| LmnI | GCTCC | 1 cut(s) | 562 |
| LpnPI | CCDG | 5 cut(s) | 28, 55, 295, 318, 604 |
| Lsp1109I | GCAGC | 1 cut(s) | 316 |
| LweI | GCATC | 1 cut(s) | 373 |
| MaeI | CTAG | 1 cut(s) | 131 |
| MaeII | ACGT | 1 cut(s) | 73 |
| MaeIII | GTNAC | 1 cut(s) | 214 |
| MboII | GAAGA | 4 cut(s) | 191, 237, 240, 248 |
| MlsI | TGGCCA | 1 cut(s) | 514 |
| MluCI | AATT | 4 cut(s) | 320, 366, 442, 531 |
| MluNI | TGGCCA | 1 cut(s) | 514 |
| MmeI | TCCRAC | 1 cut(s) | 164 |
| MnlI | CCTC | 8 cut(s) | 51, 262, 270, 291, 314, 339, 514, 555 |
| Mox20I | TGGCCA | 1 cut(s) | 514 |
| MroXI | GAANNNNTTC | 1 cut(s) | 531 |
| MscI | TGGCCA | 1 cut(s) | 514 |
| MslI | CAYNNNNRTG | 1 cut(s) | 637 |
| Msp20I | TGGCCA | 1 cut(s) | 514 |
| MspR9I | CCNGG | 1 cut(s) | 43 |
| MvaI | CCWGG | 1 cut(s) | 43 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 170 |
| NlaIII | CATG | 2 cut(s) | 23, 599 |
| NlaIV | GGNNCC | 1 cut(s) | 302 |
| OliI | CACNNNNGTG | 1 cut(s) | 637 |
| PdmI | GAANNNNTTC | 1 cut(s) | 531 |
| PfeI | GAWTC | 2 cut(s) | 98, 391 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 48 |
| PkrI | GCNGC | 1 cut(s) | 331 |
| PpuMI | RGGWCCY | 1 cut(s) | 300 |
| Psp5II | RGGWCCY | 1 cut(s) | 300 |
| Psp6I | CCWGG | 1 cut(s) | 41 |
| PspGI | CCWGG | 1 cut(s) | 41 |
| PspN4I | GGNNCC | 1 cut(s) | 302 |
| PspPI | GGNCC | 2 cut(s) | 279, 300 |
| PspPPI | RGGWCCY | 1 cut(s) | 300 |
| RseI | CAYNNNNRTG | 1 cut(s) | 637 |
| SatI | GCNGC | 1 cut(s) | 330 |
| Sau96I | GGNCC | 2 cut(s) | 279, 300 |
| ScrFI | CCNGG | 1 cut(s) | 43 |
| SfaNI | GCATC | 1 cut(s) | 373 |
| SinI | GGWCC | 2 cut(s) | 279, 300 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 637 |
| Sse9I | AATT | 4 cut(s) | 320, 366, 442, 531 |
| SsiI | CCGC | 1 cut(s) | 91 |
| SspMI | CTAG | 1 cut(s) | 131 |
| StyD4I | CCNGG | 1 cut(s) | 41 |
| TaaI | ACNGT | 3 cut(s) | 469, 610, 654 |
| TaiI | ACGT | 1 cut(s) | 76 |
| TasI | AATT | 4 cut(s) | 320, 366, 442, 531 |
| TfiI | GAWTC | 2 cut(s) | 98, 391 |
| TscAI | CASTG | 1 cut(s) | 294 |
| TseI | GCWGC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 3 cut(s) | 36, 71, 361 |
| TspRI | CASTG | 1 cut(s) | 294 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 48 |
| VpaK11BI | GGWCC | 2 cut(s) | 279, 300 |
| XmiI | GTMKAC | 1 cut(s) | 605 |
| XmnI | GAANNNNTTC | 1 cut(s) | 531 |
| XspI | CTAG | 1 cut(s) | 131 |