ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 481, 1962 |
| AccB1I | GGYRCC | 1 cut(s) | 2515 |
| AccI | GTMKAC | 2 cut(s) | 2049, 2562 |
| AccII | CGCG | 1 cut(s) | 418 |
| AciI | CCGC | 3 cut(s) | 233, 416, 2827 |
| AcoI | YGGCCR | 1 cut(s) | 2448 |
| AcsI | RAATTY | 6 cut(s) | 848, 998, 1325, 1676, 1795, 2126 |
| AcuI | CTGAAG | 4 cut(s) | 138, 1229, 1789, 1839 |
| AcyI | GRCGYC | 1 cut(s) | 2516 |
| AfaI | GTAC | 8 cut(s) | 339, 1016, 1144, 1448, 2074, 2231, 2376, 2920 |
| AfeI | AGCGCT | 1 cut(s) | 813 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1734, 1757, 1817, 2173, 2708 |
| AgeI | ACCGGT | 1 cut(s) | 540 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 226 |
| AjnI | CCWGG | 2 cut(s) | 331, 2486 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2022, 2054, 2390, 2422 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 688, 720, 1729, 1753, 1761, 1785 |
| Alw21I | GWGCWC | 3 cut(s) | 1124, 1620, 1939 |
| Alw26I | GTCTC | 4 cut(s) | 527, 1176, 1573, 2376 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 523 |
| Ama87I | CYCGRG | 1 cut(s) | 707 |
| Aor51HI | AGCGCT | 1 cut(s) | 813 |
| ApaI | GGGCCC | 2 cut(s) | 774, 2659 |
| ApeKI | GCWGC | 6 cut(s) | 267, 270, 1494, 1991, 2161, 2780 |
| ApoI | RAATTY | 6 cut(s) | 848, 998, 1325, 1676, 1795, 2126 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 155, 187 |
| AseI | ATTAAT | 1 cut(s) | 887 |
| AsiGI | ACCGGT | 1 cut(s) | 540 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2847 |
| AspA2I | CCTAGG | 2 cut(s) | 1309, 2320 |
| AspLEI | GCGC | 3 cut(s) | 814, 2518, 2768 |
| AsuC2I | CCSGG | 2 cut(s) | 1729, 2834 |
| AsuHPI | GGTGA | 5 cut(s) | 419, 472, 610, 1963, 2882 |
| AsuII | TTCGAA | 1 cut(s) | 2898 |
| AvaI | CYCGRG | 1 cut(s) | 707 |
| AvaII | GGWCC | 6 cut(s) | 1316, 1725, 1769, 2410, 2829, 2934 |
| AvrII | CCTAGG | 2 cut(s) | 1309, 2320 |
| BaeGI | GKGCMC | 2 cut(s) | 774, 2659 |
| BalI | TGGCCA | 1 cut(s) | 2450 |
| BamHI | GGATCC | 2 cut(s) | 2698, 2854 |
| BanI | GGYRCC | 1 cut(s) | 2515 |
| BanII | GRGCYC | 4 cut(s) | 774, 1124, 1939, 2659 |
| BauI | CACGAG | 1 cut(s) | 1179 |
| BbsI | GAAGAC | 2 cut(s) | 186, 2907 |
| Bbv12I | GWGCWC | 3 cut(s) | 1124, 1620, 1939 |
| BbvCI | CCTCAGC | 1 cut(s) | 893 |
| BbvI | GCAGC | 6 cut(s) | 257, 279, 1481, 1978, 2173, 2792 |
| BccI | CCATC | 6 cut(s) | 355, 628, 787, 1144, 2063, 2270 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 81, 115, 2102, 2136 |
| BciT130I | CCWGG | 2 cut(s) | 333, 2488 |
| BciVI | GTATCC | 2 cut(s) | 2501, 2873 |
| BclI | TGATCA | 1 cut(s) | 2911 |
| BcnI | CCSGG | 2 cut(s) | 1729, 2834 |
| BcoDI | GTCTC | 4 cut(s) | 527, 1176, 1573, 2376 |
| BfaI | CTAG | 7 cut(s) | 489, 530, 756, 783, 1310, 1706, 2321 |
| BfmI | CTRYAG | 5 cut(s) | 515, 1386, 2502, 2563, 2802 |
| BfoI | RGCGCY | 2 cut(s) | 815, 2519 |
| BfuAI | ACCTGC | 2 cut(s) | 481, 1962 |
| BfuI | GTATCC | 2 cut(s) | 2501, 2873 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2305 |
| BisI | GCNGC | 6 cut(s) | 268, 271, 1495, 1992, 2162, 2781 |
| BlnI | CCTAGG | 2 cut(s) | 1309, 2320 |
| BlsI | GCNGC | 6 cut(s) | 269, 272, 1496, 1993, 2163, 2782 |
| BmcAI | AGTACT | 2 cut(s) | 1016, 2920 |
| Bme1390I | CCNGG | 4 cut(s) | 333, 1729, 2488, 2834 |
| Bme18I | GGWCC | 6 cut(s) | 1316, 1725, 1769, 2410, 2829, 2934 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 226 |
| BmeT110I | CYCGRG | 1 cut(s) | 707 |
| BmrFI | CCNGG | 4 cut(s) | 333, 1729, 2488, 2834 |
| BmrI | ACTGGG | 1 cut(s) | 1053 |
| BmsI | GCATC | 3 cut(s) | 1291, 1568, 2962 |
| BmuI | ACTGGG | 1 cut(s) | 1053 |
| BpiI | GAAGAC | 2 cut(s) | 186, 2907 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2921, 2953 |
| BpmI | CTGGAG | 2 cut(s) | 1218, 2708 |
| Bpu10I | CCTNAGC | 2 cut(s) | 815, 893 |
| Bpu14I | TTCGAA | 1 cut(s) | 2898 |
| BpuEI | CTTGAG | 4 cut(s) | 584, 1377, 1604, 2923 |
| BpuMI | CCSGG | 2 cut(s) | 1729, 2834 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1544 |
| BsaHI | GRCGYC | 1 cut(s) | 2516 |
| BsaJI | CCNNGG | 6 cut(s) | 1309, 1498, 2320, 2702, 2832, 2866 |
| BsaWI | WCCGGW | 2 cut(s) | 540, 620 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 688, 718, 1842, 1872 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1734, 1757, 1817, 2173, 2708 |
| Bse118I | RCCGGY | 1 cut(s) | 540 |
| Bse3DI | GCAATG | 4 cut(s) | 945, 1241, 1561, 1632 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1544 |
| BseBI | CCWGG | 2 cut(s) | 333, 2488 |
| BseDI | CCNNGG | 6 cut(s) | 1309, 1498, 2320, 2702, 2832, 2866 |
| BseGI | GGATG | 4 cut(s) | 245, 1306, 2281, 2845 |
| BseJI | GATNNNNATC | 1 cut(s) | 1544 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1734, 1757, 1817, 2173, 2708 |
| BseMI | GCAATG | 4 cut(s) | 945, 1241, 1561, 1632 |
| BseMII | CTCAG | 6 cut(s) | 515, 884, 979, 1107, 1431, 1931 |
| BseRI | GAGGAG | 3 cut(s) | 910, 1458, 1803 |
| BseSI | GKGCMC | 2 cut(s) | 774, 2659 |
| BseXI | GCAGC | 6 cut(s) | 257, 279, 1481, 1978, 2173, 2792 |
| BsgI | GTGCAG | 4 cut(s) | 1031, 1110, 1161, 2907 |
| Bsh1236I | CGCG | 1 cut(s) | 418 |
| BshNI | GGYRCC | 1 cut(s) | 2515 |
| BshTI | ACCGGT | 1 cut(s) | 540 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1124, 1620, 1939 |
| BsiHKCI | CYCGRG | 1 cut(s) | 707 |
| BsiSI | CCGG | 5 cut(s) | 477, 541, 621, 1728, 2834 |
| BslFI | GGGAC | 4 cut(s) | 176, 1666, 1750, 1755 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1734, 1757, 1817, 2173, 2708 |
| BsmAI | GTCTC | 4 cut(s) | 527, 1176, 1573, 2376 |
| BsmBI | CGTCTC | 1 cut(s) | 1573 |
| BsmFI | GGGAC | 4 cut(s) | 176, 1666, 1750, 1755 |
| BsmI | GAATGC | 1 cut(s) | 1887 |
| BsoBI | CYCGRG | 1 cut(s) | 707 |
| Bsp119I | TTCGAA | 1 cut(s) | 2898 |
| Bsp120I | GGGCCC | 2 cut(s) | 770, 2655 |
| Bsp1286I | GDGCHC | 5 cut(s) | 774, 1124, 1620, 1939, 2659 |
| Bsp1407I | TGTACA | 3 cut(s) | 1142, 1446, 2374 |
| Bsp19I | CCATGG | 1 cut(s) | 2866 |
| BspACI | CCGC | 3 cut(s) | 233, 416, 2827 |
| BspCNI | CTCAG | 6 cut(s) | 516, 885, 978, 1108, 1432, 1932 |
| BspFNI | CGCG | 1 cut(s) | 418 |
| BspHI | TCATGA | 1 cut(s) | 42 |
| BspMAI | CTGCAG | 1 cut(s) | 2806 |
| BspMI | ACCTGC | 2 cut(s) | 481, 1962 |
| BspT104I | TTCGAA | 1 cut(s) | 2898 |
| BspT107I | GGYRCC | 1 cut(s) | 2515 |
| BsrDI | GCAATG | 4 cut(s) | 945, 1241, 1561, 1632 |
| BsrFI | RCCGGY | 1 cut(s) | 540 |
| BsrGI | TGTACA | 3 cut(s) | 1142, 1446, 2374 |
| BssAI | RCCGGY | 1 cut(s) | 540 |
| BssECI | CCNNGG | 6 cut(s) | 1309, 1498, 2320, 2702, 2832, 2866 |
| BssNI | GRCGYC | 1 cut(s) | 2516 |
| BssSI | CACGAG | 1 cut(s) | 1179 |
| BssT1I | CCWWGG | 4 cut(s) | 1309, 1498, 2320, 2866 |
| Bst2BI | CACGAG | 1 cut(s) | 1179 |
| Bst2UI | CCWGG | 2 cut(s) | 333, 2488 |
| Bst4CI | ACNGT | 9 cut(s) | 519, 556, 1368, 1571, 2217, 2567, 2593, 2763, 2918 |
| Bst6I | CTCTTC | 3 cut(s) | 111, 1290, 2460 |
| BstACI | GRCGYC | 1 cut(s) | 2516 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1615 |
| BstAUI | TGTACA | 3 cut(s) | 1142, 1446, 2374 |
| BstBI | TTCGAA | 1 cut(s) | 2898 |
| BstC8I | GCNNGC | 6 cut(s) | 211, 1010, 1459, 1492, 2254, 2816 |
| BstDSI | CCRYGG | 1 cut(s) | 2866 |
| BstEII | GGTNACC | 1 cut(s) | 360 |
| BstF5I | GGATG | 4 cut(s) | 245, 1306, 2281, 2845 |
| BstFNI | CGCG | 1 cut(s) | 418 |
| BstH2I | RGCGCY | 2 cut(s) | 815, 2519 |
| BstHHI | GCGC | 3 cut(s) | 814, 2518, 2768 |
| BstMAI | GTCTC | 4 cut(s) | 527, 1176, 1573, 2376 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 66, 684, 1045, 1615, 1643, 2253, 2305, 2824 |
| BstNI | CCWGG | 2 cut(s) | 333, 2488 |
| BstNSI | RCATGY | 1 cut(s) | 2818 |
| BstPI | GGTNACC | 1 cut(s) | 360 |
| BstSCI | CCNGG | 4 cut(s) | 331, 1727, 2486, 2832 |
| BstSFI | CTRYAG | 5 cut(s) | 515, 1386, 2502, 2563, 2802 |
| BstSLI | GKGCMC | 2 cut(s) | 774, 2659 |
| BstUI | CGCG | 1 cut(s) | 418 |
| BstV1I | GCAGC | 6 cut(s) | 257, 279, 1481, 1978, 2173, 2792 |
| BstV2I | GAAGAC | 2 cut(s) | 186, 2907 |
| BstX2I | RGATCY | 5 cut(s) | 747, 961, 1710, 2698, 2854 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 758 |
| BstYI | RGATCY | 5 cut(s) | 747, 961, 1710, 2698, 2854 |
| BsuI | GTATCC | 2 cut(s) | 2501, 2873 |
| BtgI | CCRYGG | 1 cut(s) | 2866 |
| BtsCI | GGATG | 4 cut(s) | 245, 1306, 2281, 2845 |
| BtsI | GCAGTG | 1 cut(s) | 2370 |
| BtsIMutI | CAGTG | 6 cut(s) | 402, 829, 1041, 1359, 2370, 2645 |
| BveI | ACCTGC | 2 cut(s) | 481, 1962 |
| Cac8I | GCNNGC | 6 cut(s) | 211, 1010, 1459, 1492, 2254, 2816 |
| CaiI | CAGNNNCTG | 1 cut(s) | 523 |
| CciI | TCATGA | 1 cut(s) | 42 |
| CfoI | GCGC | 3 cut(s) | 814, 2518, 2768 |
| Cfr10I | RCCGGY | 1 cut(s) | 540 |
| CseI | GACGC | 1 cut(s) | 407 |
| CsiI | ACCWGGT | 1 cut(s) | 331 |
| Csp6I | GTAC | 8 cut(s) | 338, 1015, 1143, 1447, 2073, 2230, 2375, 2919 |
| CspAI | ACCGGT | 1 cut(s) | 540 |
| CviQI | GTAC | 8 cut(s) | 338, 1015, 1143, 1447, 2073, 2230, 2375, 2919 |
| DinI | GGCGCC | 1 cut(s) | 2517 |
| DraI | TTTAAA | 1 cut(s) | 1165 |
| DriI | GACNNNNNGTC | 1 cut(s) | 226 |
| EaeI | YGGCCR | 1 cut(s) | 2448 |
| Eam1104I | CTCTTC | 3 cut(s) | 111, 1290, 2460 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 226 |
| EarI | CTCTTC | 3 cut(s) | 111, 1290, 2460 |
| EciI | GGCGGA | 1 cut(s) | 2842 |
| Ecl136II | GAGCTC | 2 cut(s) | 1122, 1937 |
| Eco130I | CCWWGG | 4 cut(s) | 1309, 1498, 2320, 2866 |
| Eco147I | AGGCCT | 2 cut(s) | 1810, 2791 |
| Eco24I | GRGCYC | 4 cut(s) | 774, 1124, 1939, 2659 |
| Eco32I | GATATC | 1 cut(s) | 2433 |
| Eco47I | GGWCC | 6 cut(s) | 1316, 1725, 1769, 2410, 2829, 2934 |
| Eco47III | AGCGCT | 1 cut(s) | 813 |
| Eco53kI | GAGCTC | 2 cut(s) | 1122, 1937 |
| Eco57I | CTGAAG | 4 cut(s) | 138, 1229, 1789, 1839 |
| Eco88I | CYCGRG | 1 cut(s) | 707 |
| Eco91I | GGTNACC | 1 cut(s) | 360 |
| EcoICRI | GAGCTC | 2 cut(s) | 1122, 1937 |
| EcoO109I | RGGNCCY | 3 cut(s) | 770, 2656, 2934 |
| EcoO65I | GGTNACC | 1 cut(s) | 360 |
| EcoRII | CCWGG | 2 cut(s) | 331, 2486 |
| EcoRV | GATATC | 1 cut(s) | 2433 |
| EcoT14I | CCWWGG | 4 cut(s) | 1309, 1498, 2320, 2866 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1561 |
| EcoT38I | GRGCYC | 4 cut(s) | 774, 1124, 1939, 2659 |
| EgeI | GGCGCC | 1 cut(s) | 2517 |
| EheI | GGCGCC | 1 cut(s) | 2517 |
| ErhI | CCWWGG | 4 cut(s) | 1309, 1498, 2320, 2866 |
| Esp3I | CGTCTC | 1 cut(s) | 1573 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1514, 1546 |
| FaqI | GGGAC | 4 cut(s) | 176, 1666, 1750, 1755 |
| FauNDI | CATATG | 1 cut(s) | 1765 |
| FbaI | TGATCA | 1 cut(s) | 2911 |
| FblI | GTMKAC | 2 cut(s) | 2049, 2562 |
| Fnu4HI | GCNGC | 6 cut(s) | 268, 271, 1495, 1992, 2162, 2781 |
| FokI | GGATG | 4 cut(s) | 232, 1313, 2288, 2852 |
| FriOI | GRGCYC | 4 cut(s) | 774, 1124, 1939, 2659 |
| Fsp4HI | GCNGC | 6 cut(s) | 268, 271, 1495, 1992, 2162, 2781 |
| FspBI | CTAG | 7 cut(s) | 489, 530, 756, 783, 1310, 1706, 2321 |
| GlaI | GCGC | 3 cut(s) | 813, 2517, 2767 |
| GluI | GCNGC | 6 cut(s) | 268, 271, 1495, 1992, 2162, 2781 |
| GsuI | CTGGAG | 2 cut(s) | 1218, 2708 |
| HaeII | RGCGCY | 2 cut(s) | 815, 2519 |
| HapII | CCGG | 5 cut(s) | 477, 541, 621, 1728, 2834 |
| HgaI | GACGC | 1 cut(s) | 407 |
| HhaI | GCGC | 3 cut(s) | 814, 2518, 2768 |
| Hin1I | GRCGYC | 1 cut(s) | 2516 |
| Hin6I | GCGC | 3 cut(s) | 812, 2516, 2766 |
| HinP1I | GCGC | 3 cut(s) | 812, 2516, 2766 |
| HincII | GTYRAC | 1 cut(s) | 583 |
| HindII | GTYRAC | 1 cut(s) | 583 |
| HindIII | AAGCTT | 2 cut(s) | 1523, 2453 |
| HinfI | GANTC | 6 cut(s) | 592, 727, 1076, 1509, 1947, 2357 |
| HpaI | GTTAAC | 1 cut(s) | 583 |
| HpaII | CCGG | 5 cut(s) | 477, 541, 621, 1728, 2834 |
| HphI | GGTGA | 5 cut(s) | 419, 472, 610, 1963, 2882 |
| Hpy166II | GTNNAC | 6 cut(s) | 338, 463, 583, 1449, 2050, 2563 |
| Hpy8I | GTNNAC | 6 cut(s) | 338, 463, 583, 1449, 2050, 2563 |
| Hpy99I | CGWCG | 1 cut(s) | 2887 |
| HpyAV | CCTTC | 9 cut(s) | 252, 286, 761, 831, 1984, 2024, 2362, 2816, 2905 |
| HpyCH4III | ACNGT | 9 cut(s) | 519, 556, 1368, 1571, 2217, 2567, 2593, 2763, 2918 |
| HpyCH4IV | ACGT | 4 cut(s) | 297, 794, 916, 2885 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 66, 684, 1045, 1615, 1643, 2253, 2305, 2824 |
| HpySE526I | ACGT | 4 cut(s) | 297, 794, 916, 2885 |
| Hsp92I | GRCGYC | 1 cut(s) | 2516 |
| HspAI | GCGC | 3 cut(s) | 812, 2516, 2766 |
| KasI | GGCGCC | 1 cut(s) | 2515 |
| Ksp22I | TGATCA | 1 cut(s) | 2911 |
| KspAI | GTTAAC | 1 cut(s) | 583 |
| LmnI | GCTCC | 6 cut(s) | 278, 709, 897, 1606, 1850, 2689 |
| Lsp1109I | GCAGC | 6 cut(s) | 257, 279, 1481, 1978, 2173, 2792 |
| LweI | GCATC | 3 cut(s) | 1291, 1568, 2962 |
| MabI | ACCWGGT | 1 cut(s) | 331 |
| MaeI | CTAG | 7 cut(s) | 489, 530, 756, 783, 1310, 1706, 2321 |
| MaeII | ACGT | 4 cut(s) | 297, 794, 916, 2885 |
| MaeIII | GTNAC | 5 cut(s) | 259, 360, 680, 824, 2474 |
| MflI | RGATCY | 5 cut(s) | 747, 961, 1710, 2698, 2854 |
| MhlI | GDGCHC | 5 cut(s) | 774, 1124, 1620, 1939, 2659 |
| MlsI | TGGCCA | 1 cut(s) | 2450 |
| MluNI | TGGCCA | 1 cut(s) | 2450 |
| Mly113I | GGCGCC | 1 cut(s) | 2516 |
| MlyI | GAGTC | 2 cut(s) | 586, 1941 |
| MmeI | TCCRAC | 6 cut(s) | 704, 939, 964, 1828, 2036, 2798 |
| Mox20I | TGGCCA | 1 cut(s) | 2450 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1561 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2847 |
| MscI | TGGCCA | 1 cut(s) | 2450 |
| MslI | CAYNNNNRTG | 2 cut(s) | 35, 2871 |
| Msp20I | TGGCCA | 1 cut(s) | 2450 |
| MspA1I | CMGCKG | 1 cut(s) | 270 |
| MspI | CCGG | 5 cut(s) | 477, 541, 621, 1728, 2834 |
| MspR9I | CCNGG | 4 cut(s) | 333, 1729, 2488, 2834 |
| Mva1269I | GAATGC | 1 cut(s) | 1887 |
| MvaI | CCWGG | 2 cut(s) | 333, 2488 |
| MvnI | CGCG | 1 cut(s) | 418 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 66, 684, 1045, 1615, 1643, 2253, 2305, 2824 |
| NarI | GGCGCC | 1 cut(s) | 2516 |
| NciI | CCSGG | 2 cut(s) | 1729, 2834 |
| NcoI | CCATGG | 1 cut(s) | 2866 |
| NdeI | CATATG | 1 cut(s) | 1765 |
| NmuCI | GTSAC | 3 cut(s) | 259, 824, 2474 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1561 |
| NspI | RCATGY | 1 cut(s) | 2818 |
| NspV | TTCGAA | 1 cut(s) | 2898 |
| PaeI | GCATGC | 1 cut(s) | 2818 |
| PagI | TCATGA | 1 cut(s) | 42 |
| PceI | AGGCCT | 2 cut(s) | 1810, 2791 |
| PctI | GAATGC | 1 cut(s) | 1887 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2847 |
| PfeI | GAWTC | 4 cut(s) | 727, 1076, 1509, 2357 |
| PfoI | TCCNGGA | 1 cut(s) | 1727 |
| PinAI | ACCGGT | 1 cut(s) | 540 |
| PkrI | GCNGC | 6 cut(s) | 269, 272, 1496, 1993, 2163, 2782 |
| PleI | GAGTC | 2 cut(s) | 586, 1941 |
| PluTI | GGCGCC | 1 cut(s) | 2519 |
| PpsI | GAGTC | 2 cut(s) | 586, 1941 |
| PpuMI | RGGWCCY | 1 cut(s) | 2934 |
| PshBI | ATTAAT | 1 cut(s) | 887 |
| Psp124BI | GAGCTC | 2 cut(s) | 1124, 1939 |
| Psp5II | RGGWCCY | 1 cut(s) | 2934 |
| Psp6I | CCWGG | 2 cut(s) | 331, 2486 |
| PspEI | GGTNACC | 1 cut(s) | 360 |
| PspGI | CCWGG | 2 cut(s) | 331, 2486 |
| PspOMI | GGGCCC | 2 cut(s) | 770, 2655 |
| PspPPI | RGGWCCY | 1 cut(s) | 2934 |
| PstI | CTGCAG | 1 cut(s) | 2806 |
| PstNI | CAGNNNCTG | 1 cut(s) | 523 |
| PsuI | RGATCY | 5 cut(s) | 747, 961, 1710, 2698, 2854 |
| PvuII | CAGCTG | 1 cut(s) | 270 |
| RsaI | GTAC | 8 cut(s) | 339, 1016, 1144, 1448, 2074, 2231, 2376, 2920 |
| RsaNI | GTAC | 8 cut(s) | 338, 1015, 1143, 1447, 2073, 2230, 2375, 2919 |
| RseI | CAYNNNNRTG | 2 cut(s) | 35, 2871 |
| SacI | GAGCTC | 2 cut(s) | 1124, 1939 |
| SatI | GCNGC | 6 cut(s) | 268, 271, 1495, 1992, 2162, 2781 |
| ScaI | AGTACT | 2 cut(s) | 1016, 2920 |
| SchI | GAGTC | 2 cut(s) | 586, 1941 |
| ScrFI | CCNGG | 4 cut(s) | 333, 1729, 2488, 2834 |
| SduI | GDGCHC | 5 cut(s) | 774, 1124, 1620, 1939, 2659 |
| SexAI | ACCWGGT | 1 cut(s) | 331 |
| SfaNI | GCATC | 3 cut(s) | 1291, 1568, 2962 |
| SfcI | CTRYAG | 5 cut(s) | 515, 1386, 2502, 2563, 2802 |
| SfoI | GGCGCC | 1 cut(s) | 2517 |
| SfuI | TTCGAA | 1 cut(s) | 2898 |
| SinI | GGWCC | 6 cut(s) | 1316, 1725, 1769, 2410, 2829, 2934 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 35, 2871 |
| SmlI | CTYRAG | 4 cut(s) | 563, 1392, 1619, 2938 |
| SmoI | CTYRAG | 4 cut(s) | 563, 1392, 1619, 2938 |
| SphI | GCATGC | 1 cut(s) | 2818 |
| SseBI | AGGCCT | 2 cut(s) | 1810, 2791 |
| SsiI | CCGC | 3 cut(s) | 233, 416, 2827 |
| SspDI | GGCGCC | 1 cut(s) | 2515 |
| SspI | AATATT | 1 cut(s) | 2635 |
| SspMI | CTAG | 7 cut(s) | 489, 530, 756, 783, 1310, 1706, 2321 |
| SstI | GAGCTC | 2 cut(s) | 1124, 1939 |
| StuI | AGGCCT | 2 cut(s) | 1810, 2791 |
| StyD4I | CCNGG | 4 cut(s) | 331, 1727, 2486, 2832 |
| StyI | CCWWGG | 4 cut(s) | 1309, 1498, 2320, 2866 |
| TaaI | ACNGT | 9 cut(s) | 519, 556, 1368, 1571, 2217, 2567, 2593, 2763, 2918 |
| TaiI | ACGT | 4 cut(s) | 300, 797, 919, 2888 |
| TaqI | TCGA | 5 cut(s) | 81, 219, 1950, 2620, 2898 |
| TatI | WGTACW | 7 cut(s) | 337, 1014, 1142, 1446, 2229, 2374, 2918 |
| TfiI | GAWTC | 4 cut(s) | 727, 1076, 1509, 2357 |
| TscAI | CASTG | 6 cut(s) | 409, 829, 1048, 1366, 2370, 2645 |
| TseFI | GTSAC | 3 cut(s) | 259, 824, 2474 |
| TseI | GCWGC | 6 cut(s) | 267, 270, 1494, 1991, 2161, 2780 |
| Tsp45I | GTSAC | 3 cut(s) | 259, 824, 2474 |
| TspGWI | ACGGA | 1 cut(s) | 1521 |
| TspRI | CASTG | 6 cut(s) | 409, 829, 1048, 1366, 2370, 2645 |
| VpaK11BI | GGWCC | 6 cut(s) | 1316, 1725, 1769, 2410, 2829, 2934 |
| VspI | ATTAAT | 1 cut(s) | 887 |
| XapI | RAATTY | 6 cut(s) | 848, 998, 1325, 1676, 1795, 2126 |
| XceI | RCATGY | 1 cut(s) | 2818 |
| XmaJI | CCTAGG | 2 cut(s) | 1309, 2320 |
| XmiI | GTMKAC | 2 cut(s) | 2049, 2562 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2847 |
| XspI | CTAG | 7 cut(s) | 489, 530, 756, 783, 1310, 1706, 2321 |
| ZrmI | AGTACT | 2 cut(s) | 1016, 2920 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1561 |