Rorug03G0263800

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001470
Physical Location & Seq
Forward (+)
25553107 .. 25554267
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0263800.1

Sequence Viewer

Length: 1161 bp
ATGGCTGATTACACCGGCTCTGTCGTCCGATACACACAGAATCGAAAGTGGTCCTCCTCAGATCCGTTGCCGGCGGCTGCGTGTTCTTCGATTAACAACCCATTTGCTGCCGAGTTTGTGCACTCTTGTACAAATTACAGAGCCCGTGCTTCTTCGATCAATCGAGTTTTATGGACACCTTCTGGGAGGCGTCTTATTACAGGCTCTCAAAACGGGGAGTTCACTCTCTGGAATGGTGAGTCATTCAAACATGAATTGAGGATTCAGGCTCATGATCAACCAATCAGGTCCATGGCGTGGAGTTTTGATGATGAAGATTGGATCTCTGGTGATGATGGAGGCACAATCAGGTATTGGAAGAGTAACATGAGTAATGTGCTTGTCATTGAATCTGCTCACCAAGAATCGGTTCGGGACTTGAGCTTCTGTCGGAGTAATTTGAAGTTTTGTTCATGTTCGGATGACACTAGTGTTAAAATCTGGGATTTTGAACGGTGCCAACAGGAGCAGACATTGACCGGCCATGGTTGGAATGTGACCAGTGTTGACTGGCACCCCACAAACTCTCTAATAGCTTCGGGTGGGAAAGACAGTGTCGTCAAACTGTGGGATGCTAGGTCACGGAGAGAACTCTGTTCGTTTTATGATCACAAAAATTGGGTGCATTCTGTCAAGTGGAACCGAAATGGTAACTGGCTGCTAACTGCTTCCAAGGATCATGTCATTAAGCTTTACGACTTGAGGGCTATGAAGGAACTTAAATCTTTCCGCGGCCATCAGAACCAAGTGACTGCTCTAGCTTGGCATCCTCTTACTGAAGACTATTTTGTCAGTGGGAGTAGTGATGGATCCATTTTCCATTGGCTTGTTGGCCATGTAACTCCCCAGGTTCAAATTCCTAACGCACACACTAACAGTTACAATAATAATAGTGTGTGGGATCTCCAGTGGCATCCTATGGGTCATATGATTTGTAGTGGTAGCAATGATCGCACCACCAAGTTTTGGTACACAACAGCAGATAAATCTAAATTCAGTCAGAATCAAAGTAATTTTCCTTTTCCATTTCATGGACCACCAACTATTGCTACTCGAGACCAAGGAACCCTTGGTTCAGGAGGTGTTGGAACCATTATACCCGGTGTTGGAATTGCGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

386

Amino Acids

43.67

Weight (kDa)

7.69

Isoelectric Point (pI)

34.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_CDC20-Fz PF24807 11 - 208 2.5e-23 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 44 - 207 1.3e-27 THOC3 beta-propeller domain
WDR55 PF24796 44 - 120 4.3e-06 WDR55
WD40_Gbeta PF25391 47 - 256 1.7e-19 G protein beta WD-40 repeat protein
Beta-prop_WDR3_1st PF25173 47 - 182 6.1e-18 WDR3 first beta-propeller domain
Beta-prop_IFT140_1st PF23383 48 - 131 3.9e-09 IFT140 first beta-propeller
Beta-prop_WDR5 PF25175 49 - 142 1.1e-08 WDR5 beta-propeller domain
Beta-prop_EIPR1 PF23609 52 - 203 1.1e-07 EIPR1 beta-propeller
WD40_Prp19 PF24814 52 - 256 3.1e-32 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 56 - 211 2.3e-16 WDHD1 first WD40 domain
EIF3I PF24805 83 - 170 1.4e-07 EIF3I
WD40_MABP1-WDR62_2nd PF24782 95 - 263 3.7e-12 MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd PF25047 97 - 266 3.6e-17 TEP-1 second beta-propeller
Beta-prop_Aladin PF25460 121 - 251 3.1e-06 Aladin seven-bladed propeller
WDR55 PF24796 127 - 251 2.5e-16 WDR55
Beta-prop_CAF1B_HIR1 PF24105 129 - 208 3e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 130 - 292 3.9e-19 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_2nd PF25172 132 - 205 1.2e-10 WDR3 second beta-propeller domain
Beta-prop_WDR5 PF25175 132 - 246 1.8e-26 WDR5 beta-propeller domain
Beta-prop_EML_2 PF23414 145 - 293 2.7e-21 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 149 - 236 7.3e-08 WDR90/POC16, second beta-propeller
Beta-prop_IFT140_1st PF23383 155 - 242 3.6e-06 IFT140 first beta-propeller
Beta-prop_WDR3_1st PF25173 157 - 288 1.5e-28 WDR3 first beta-propeller domain
WD40 PF00400 167 - 204 1.1e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 171 - 251 3.7e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML PF23409 173 - 278 1e-08 Echinoderm microtubule-associated protein first beta-propeller
EIF3I PF24805 176 - 260 2.7e-10 EIF3I
WD40_MABP1-WDR62_2nd PF24782 186 - 344 1.1e-07 MABP1/WDR62 second WD40 domain
Beta-prop_WDR36-Utp21_1st PF25171 194 - 337 2.2e-08 WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz PF24807 199 - 341 1e-20 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 211 - 340 1.1e-10 WDR3 second beta-propeller domain
WD40 PF00400 211 - 246 8.1e-08 WD domain, G-beta repeat
Beta-prop_DCAF4 PF23761 212 - 274 2.5e-06 DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_WDR5 PF25175 214 - 340 1.9e-18 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 217 - 348 3.3e-24 THOC3 beta-propeller domain
Beta-prop_Aladin PF25460 219 - 337 5.8e-07 Aladin seven-bladed propeller
WD40_WDHD1_1st PF24817 221 - 329 5.3e-13 WDHD1 first WD40 domain
WD40 PF00400 251 - 288 8.7e-06 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 253 - 353 1e-06 CAF1B/HIR1 beta-propeller domain
WD40_Prp19 PF24814 253 - 342 3.8e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 596, 827
AccB1I GGYRCC 2 cut(s) 495, 552
AccB7I CCANNNNNTGG 3 cut(s) 297, 1005, 1070
AccII CGCG 1 cut(s) 771
AciI CCGC 4 cut(s) 74, 769, 771, 1154
AclWI GGATC 6 cut(s) 56, 329, 723, 843, 856, 948
AcoI YGGCCR 3 cut(s) 520, 772, 871
AcsI RAATTY 2 cut(s) 894, 1031
AcuI CTGAAG 1 cut(s) 837
AcyI GRCGYC 1 cut(s) 190
AfaI GTAC 2 cut(s) 130, 1010
AfiI CCNNNNNNNGG 5 cut(s) 297, 406, 1005, 1070, 1145
AgsI TTSAA 5 cut(s) 247, 389, 442, 491, 893
AhlI ACTAGT 1 cut(s) 467
AjnI CCWGG 1 cut(s) 885
AjuI GAANNNNNNNTTGG 2 cut(s) 393, 425
AluBI AGCT 4 cut(s) 423, 575, 730, 800
AluI AGCT 4 cut(s) 423, 575, 730, 800
Alw21I GWGCWC 1 cut(s) 123
Alw26I GTCTC 1 cut(s) 1089
Alw44I GTGCAC 1 cut(s) 119
AlwI GGATC 6 cut(s) 56, 329, 723, 843, 856, 948
Ama87I CYCGRG 1 cut(s) 1092
AoxI GGCC 3 cut(s) 520, 772, 871
ApaLI GTGCAC 1 cut(s) 119
ApeKI GCWGC 3 cut(s) 77, 107, 697
ApoI RAATTY 2 cut(s) 894, 1031
Asp700I GAANNNNTTC 1 cut(s) 408
AspS9I GGNCC 3 cut(s) 51, 288, 1073
AsuC2I CCSGG 1 cut(s) 1140
AsuHPI GGTGA 3 cut(s) 248, 341, 389
AvaI CYCGRG 1 cut(s) 1092
AvaII GGWCC 3 cut(s) 51, 288, 1073
BaeGI GKGCMC 1 cut(s) 123
BalI TGGCCA 1 cut(s) 873
BamHI GGATCC 1 cut(s) 848
BanI GGYRCC 2 cut(s) 495, 552
BanII GRGCYC 1 cut(s) 145
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 1 cut(s) 123
BbvI GCAGC 3 cut(s) 64, 94, 684
BccI CCATC 3 cut(s) 329, 783, 839
BciT130I CCWGG 1 cut(s) 887
BclI TGATCA 2 cut(s) 274, 646
BcnI CCSGG 1 cut(s) 1140
BcoDI GTCTC 1 cut(s) 1089
BcuI ACTAGT 1 cut(s) 467
BfaI CTAG 3 cut(s) 468, 615, 797
BisI GCNGC 5 cut(s) 75, 78, 108, 698, 772
BlsI GCNGC 5 cut(s) 76, 79, 109, 699, 773
Bme1390I CCNGG 2 cut(s) 887, 1140
Bme18I GGWCC 3 cut(s) 51, 288, 1073
BmeT110I CYCGRG 1 cut(s) 1092
BmgT120I GGNCC 3 cut(s) 51, 288, 1073
BmiI GGNNCC 6 cut(s) 497, 554, 680, 850, 1105, 1129
BmrFI CCNGG 2 cut(s) 887, 1140
BmsI GCATC 3 cut(s) 601, 814, 961
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 1 cut(s) 929
BpuEI CTTGAG 2 cut(s) 439, 760
BpuMI CCSGG 1 cut(s) 1140
BsaHI GRCGYC 1 cut(s) 190
BsaI GGTCTC 1 cut(s) 1089
BsaJI CCNNGG 7 cut(s) 291, 523, 711, 769, 885, 1099, 1108
Bsc4I CCNNNNNNNGG 5 cut(s) 297, 406, 1005, 1070, 1145
Bse118I RCCGGY 3 cut(s) 14, 70, 518
Bse1I ACTGG 4 cut(s) 540, 554, 698, 946
Bse3DI GCAATG 1 cut(s) 991
BseBI CCWGG 1 cut(s) 887
BseDI CCNNGG 7 cut(s) 291, 523, 711, 769, 885, 1099, 1108
BseGI GGATG 4 cut(s) 466, 616, 805, 952
BseLI CCNNNNNNNGG 5 cut(s) 297, 406, 1005, 1070, 1145
BseMI GCAATG 1 cut(s) 991
BseMII CTCAG 1 cut(s) 72
BseNI ACTGG 4 cut(s) 540, 554, 698, 946
BseRI GAGGAG 1 cut(s) 46
BseSI GKGCMC 1 cut(s) 123
BseXI GCAGC 3 cut(s) 64, 94, 684
Bsh1236I CGCG 1 cut(s) 771
BshFI GGCC 3 cut(s) 522, 774, 873
BshNI GGYRCC 2 cut(s) 495, 552
BsiHKAI GWGCWC 1 cut(s) 123
BsiHKCI CYCGRG 1 cut(s) 1092
BsiSI CCGG 4 cut(s) 15, 71, 519, 1140
BslFI GGGAC 1 cut(s) 428
BslI CCNNNNNNNGG 5 cut(s) 297, 406, 1005, 1070, 1145
BsmAI GTCTC 1 cut(s) 1089
BsmFI GGGAC 1 cut(s) 428
BsmI GAATGC 1 cut(s) 664
BsnI GGCC 3 cut(s) 522, 774, 873
Bso31I GGTCTC 1 cut(s) 1089
BsoBI CYCGRG 1 cut(s) 1092
Bsp1286I GDGCHC 2 cut(s) 123, 145
Bsp1407I TGTACA 1 cut(s) 128
Bsp143I GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
Bsp19I CCATGG 2 cut(s) 291, 523
BspACI CCGC 4 cut(s) 74, 769, 771, 1154
BspANI GGCC 3 cut(s) 522, 774, 873
BspCNI CTCAG 1 cut(s) 71
BspFNI CGCG 1 cut(s) 771
BspHI TCATGA 1 cut(s) 271
BspLI GGNNCC 6 cut(s) 497, 554, 680, 850, 1105, 1129
BspPI GGATC 6 cut(s) 56, 329, 723, 843, 856, 948
BspT107I GGYRCC 2 cut(s) 495, 552
BspTNI GGTCTC 1 cut(s) 1089
BsrDI GCAATG 1 cut(s) 991
BsrFI RCCGGY 3 cut(s) 14, 70, 518
BsrGI TGTACA 1 cut(s) 128
BsrI ACTGG 4 cut(s) 540, 554, 698, 946
BssAI RCCGGY 3 cut(s) 14, 70, 518
BssECI CCNNGG 7 cut(s) 291, 523, 711, 769, 885, 1099, 1108
BssMI GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
BssNI GRCGYC 1 cut(s) 190
BssT1I CCWWGG 5 cut(s) 291, 523, 711, 1099, 1108
Bst2UI CCWGG 1 cut(s) 887
Bst4CI ACNGT 4 cut(s) 495, 593, 606, 917
Bst6I CTCTTC 1 cut(s) 353
BstACI GRCGYC 1 cut(s) 190
BstAUI TGTACA 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 72
BstDEI CTNAG 1 cut(s) 58
BstDSI CCRYGG 3 cut(s) 291, 523, 769
BstF5I GGATG 4 cut(s) 466, 616, 805, 952
BstFNI CGCG 1 cut(s) 771
BstKTI GATC 9 cut(s) 64, 159, 277, 324, 649, 718, 851, 943, 991
BstMAI GTCTC 1 cut(s) 1089
BstMBI GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
BstMWI GCNNNNNNNGC 1 cut(s) 990
BstNI CCWGG 1 cut(s) 887
BstSCI CCNGG 2 cut(s) 885, 1138
BstSLI GKGCMC 1 cut(s) 123
BstUI CGCG 1 cut(s) 771
BstV1I GCAGC 3 cut(s) 64, 94, 684
BstV2I GAAGAC 1 cut(s) 825
BstX2I RGATCY 4 cut(s) 61, 321, 848, 940
BstYI RGATCY 4 cut(s) 61, 321, 848, 940
BsuRI GGCC 3 cut(s) 522, 774, 873
BtgI CCRYGG 3 cut(s) 291, 523, 769
BtsCI GGATG 4 cut(s) 466, 616, 805, 952
BtsIMutI CAGTG 4 cut(s) 547, 598, 838, 953
Cac8I GCNNGC 1 cut(s) 72
CciI TCATGA 1 cut(s) 271
Cfr10I RCCGGY 3 cut(s) 14, 70, 518
Cfr13I GGNCC 3 cut(s) 51, 288, 1073
Cfr42I CCGCGG 1 cut(s) 772
CseI GACGC 1 cut(s) 179
Csp6I GTAC 2 cut(s) 129, 1009
CviAII CATG 9 cut(s) 251, 272, 292, 367, 453, 524, 719, 875, 1070
CviQI GTAC 2 cut(s) 129, 1009
DdeI CTNAG 1 cut(s) 58
DpnI GATC 9 cut(s) 63, 158, 276, 323, 648, 717, 850, 942, 990
DpnII GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
DrdI GACNNNNNNGTC 2 cut(s) 596, 827
DseDI GACNNNNNNGTC 2 cut(s) 596, 827
EaeI YGGCCR 3 cut(s) 520, 772, 871
Eam1104I CTCTTC 1 cut(s) 353
EarI CTCTTC 1 cut(s) 353
Eco130I CCWWGG 5 cut(s) 291, 523, 711, 1099, 1108
Eco24I GRGCYC 1 cut(s) 145
Eco31I GGTCTC 1 cut(s) 1089
Eco47I GGWCC 3 cut(s) 51, 288, 1073
Eco57I CTGAAG 1 cut(s) 837
Eco88I CYCGRG 1 cut(s) 1092
EcoRII CCWGG 1 cut(s) 885
EcoT14I CCWWGG 5 cut(s) 291, 523, 711, 1099, 1108
EcoT38I GRGCYC 1 cut(s) 145
ErhI CCWWGG 5 cut(s) 291, 523, 711, 1099, 1108
FaeI CATG 9 cut(s) 254, 275, 295, 370, 456, 527, 722, 878, 1073
FalI AAGNNNNNCTT 2 cut(s) 1092, 1124
FaqI GGGAC 1 cut(s) 428
FatI CATG 9 cut(s) 250, 271, 291, 366, 452, 523, 718, 874, 1069
FauNDI CATATG 1 cut(s) 966
FbaI TGATCA 2 cut(s) 274, 646
Fnu4HI GCNGC 5 cut(s) 75, 78, 108, 698, 772
FokI GGATG 4 cut(s) 473, 623, 792, 939
FriOI GRGCYC 1 cut(s) 145
Fsp4HI GCNGC 5 cut(s) 75, 78, 108, 698, 772
FspBI CTAG 3 cut(s) 468, 615, 797
GluI GCNGC 5 cut(s) 75, 78, 108, 698, 772
GsuI CTGGAG 1 cut(s) 929
HaeIII GGCC 3 cut(s) 522, 774, 873
HapII CCGG 4 cut(s) 15, 71, 519, 1140
HgaI GACGC 1 cut(s) 179
Hin1I GRCGYC 1 cut(s) 190
Hin1II CATG 9 cut(s) 254, 275, 295, 370, 456, 527, 722, 878, 1073
HincII GTYRAC 1 cut(s) 547
HindII GTYRAC 1 cut(s) 547
HindIII AAGCTT 1 cut(s) 728
HinfI GANTC 6 cut(s) 40, 239, 262, 389, 404, 1042
HpaII CCGG 4 cut(s) 15, 71, 519, 1140
HphI GGTGA 3 cut(s) 248, 341, 389
Hpy166II GTNNAC 4 cut(s) 121, 222, 547, 1011
Hpy188I TCNGA 6 cut(s) 29, 61, 432, 460, 780, 1041
Hpy188III TCNNGA 5 cut(s) 229, 272, 413, 1094, 1116
Hpy8I GTNNAC 4 cut(s) 121, 222, 547, 1011
HpyAV CCTTC 2 cut(s) 189, 745
HpyCH4III ACNGT 4 cut(s) 495, 593, 606, 917
HpyCH4V TGCA 2 cut(s) 121, 664
HpyF10VI GCNNNNNNNGC 1 cut(s) 990
HpyF3I CTNAG 1 cut(s) 58
Hsp92I GRCGYC 1 cut(s) 190
Hsp92II CATG 9 cut(s) 254, 275, 295, 370, 456, 527, 722, 878, 1073
KroI GCCGGC 1 cut(s) 70
KroNI GCCGGC 1 cut(s) 72
Ksp22I TGATCA 2 cut(s) 274, 646
KspI CCGCGG 1 cut(s) 772
Kzo9I GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
LmnI GCTCC 1 cut(s) 505
Lsp1109I GCAGC 3 cut(s) 64, 94, 684
LweI GCATC 3 cut(s) 601, 814, 961
MaeI CTAG 3 cut(s) 468, 615, 797
MaeIII GTNAC 7 cut(s) 362, 535, 618, 689, 787, 877, 917
MalI GATC 9 cut(s) 63, 158, 276, 323, 648, 717, 850, 942, 990
MboI GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
MboII GAAGA 5 cut(s) 78, 144, 326, 370, 830
MflI RGATCY 4 cut(s) 61, 321, 848, 940
MhlI GDGCHC 2 cut(s) 123, 145
MlsI TGGCCA 1 cut(s) 873
MluCI AATT 8 cut(s) 133, 254, 436, 655, 894, 1031, 1051, 1149
MluNI TGGCCA 1 cut(s) 873
MlyI GAGTC 1 cut(s) 248
MmeI TCCRAC 4 cut(s) 410, 509, 1105, 1126
MnlI CCTC 8 cut(s) 64, 67, 180, 252, 332, 735, 819, 1112
Mox20I TGGCCA 1 cut(s) 873
MroNI GCCGGC 1 cut(s) 70
MroXI GAANNNNTTC 1 cut(s) 408
MscI TGGCCA 1 cut(s) 873
MseI TTAA 5 cut(s) 93, 474, 726, 759, 1159
Msp20I TGGCCA 1 cut(s) 873
MspA1I CMGCKG 1 cut(s) 771
MspI CCGG 4 cut(s) 15, 71, 519, 1140
MspR9I CCNGG 2 cut(s) 887, 1140
Mva1269I GAATGC 1 cut(s) 664
MvaI CCWGG 1 cut(s) 887
MvnI CGCG 1 cut(s) 771
MwoI GCNNNNNNNGC 1 cut(s) 990
NaeI GCCGGC 1 cut(s) 72
NciI CCSGG 1 cut(s) 1140
NcoI CCATGG 2 cut(s) 291, 523
NdeI CATATG 1 cut(s) 966
NdeII GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
NgoMIV GCCGGC 1 cut(s) 70
NlaIII CATG 9 cut(s) 254, 275, 295, 370, 456, 527, 722, 878, 1073
NlaIV GGNNCC 6 cut(s) 497, 554, 680, 850, 1105, 1129
NmeAIII GCCGAG 1 cut(s) 136
NmuCI GTSAC 3 cut(s) 535, 618, 787
PaeR7I CTCGAG 1 cut(s) 1092
PagI TCATGA 1 cut(s) 271
PctI GAATGC 1 cut(s) 664
PdiI GCCGGC 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 408
PfeI GAWTC 5 cut(s) 40, 262, 389, 404, 1042
PflFI GACNNNGTC 1 cut(s) 593
PflMI CCANNNNNTGG 3 cut(s) 297, 1005, 1070
PkrI GCNGC 5 cut(s) 76, 79, 109, 699, 773
PleI GAGTC 1 cut(s) 247
PpsI GAGTC 1 cut(s) 247
Psp6I CCWGG 1 cut(s) 885
PspGI CCWGG 1 cut(s) 885
PspN4I GGNNCC 6 cut(s) 497, 554, 680, 850, 1105, 1129
PspPI GGNCC 3 cut(s) 51, 288, 1073
PsuI RGATCY 4 cut(s) 61, 321, 848, 940
PsyI GACNNNGTC 1 cut(s) 593
RsaI GTAC 2 cut(s) 130, 1010
RsaNI GTAC 2 cut(s) 129, 1009
SacII CCGCGG 1 cut(s) 772
SaqAI TTAA 5 cut(s) 93, 474, 726, 759, 1159
SatI GCNGC 5 cut(s) 75, 78, 108, 698, 772
Sau3AI GATC 9 cut(s) 61, 156, 274, 321, 646, 715, 848, 940, 988
Sau96I GGNCC 3 cut(s) 51, 288, 1073
SchI GAGTC 1 cut(s) 248
ScrFI CCNGG 2 cut(s) 887, 1140
SduI GDGCHC 2 cut(s) 123, 145
SfaNI GCATC 3 cut(s) 601, 814, 961
Sfr274I CTCGAG 1 cut(s) 1092
Sfr303I CCGCGG 1 cut(s) 772
SgrBI CCGCGG 1 cut(s) 772
SinI GGWCC 3 cut(s) 51, 288, 1073
SlaI CTCGAG 1 cut(s) 1092
SmlI CTYRAG 3 cut(s) 418, 739, 1092
SmoI CTYRAG 3 cut(s) 418, 739, 1092
SpeI ACTAGT 1 cut(s) 467
Sse9I AATT 8 cut(s) 133, 254, 436, 655, 894, 1031, 1051, 1149
SsiI CCGC 4 cut(s) 74, 769, 771, 1154
SspMI CTAG 3 cut(s) 468, 615, 797
StyD4I CCNGG 2 cut(s) 885, 1138
StyI CCWWGG 5 cut(s) 291, 523, 711, 1099, 1108
TaaI ACNGT 4 cut(s) 495, 593, 606, 917
TaqI TCGA 5 cut(s) 43, 89, 155, 163, 1093
TasI AATT 8 cut(s) 133, 254, 436, 655, 894, 1031, 1051, 1149
TatI WGTACW 1 cut(s) 128
TauI GCSGC 2 cut(s) 77, 774
TfiI GAWTC 5 cut(s) 40, 262, 389, 404, 1042
Tru1I TTAA 5 cut(s) 93, 474, 726, 759, 1159
Tru9I TTAA 5 cut(s) 93, 474, 726, 759, 1159
TscAI CASTG 4 cut(s) 547, 598, 838, 953
TseFI GTSAC 3 cut(s) 535, 618, 787
TseI GCWGC 3 cut(s) 77, 107, 697
Tsp45I GTSAC 3 cut(s) 535, 618, 787
TspDTI ATGAA 5 cut(s) 267, 327, 441, 764, 1058
TspGWI ACGGA 2 cut(s) 54, 637
TspRI CASTG 4 cut(s) 547, 598, 838, 953
Tth111I GACNNNGTC 1 cut(s) 593
Van91I CCANNNNNTGG 3 cut(s) 297, 1005, 1070
VneI GTGCAC 1 cut(s) 119
VpaK11BI GGWCC 3 cut(s) 51, 288, 1073
XapI RAATTY 2 cut(s) 894, 1031
XcmI CCANNNNNNNNNTGG 2 cut(s) 866, 1106
XhoI CTCGAG 1 cut(s) 1092
XmnI GAANNNNTTC 1 cut(s) 408
XspI CTAG 3 cut(s) 468, 615, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.