Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 172 |
| AciI | CCGC | 1 cut(s) | 170 |
| AfaI | GTAC | 1 cut(s) | 294 |
| AgsI | TTSAA | 3 cut(s) | 71, 154, 161 |
| AluBI | AGCT | 4 cut(s) | 129, 283, 374, 398 |
| AluI | AGCT | 4 cut(s) | 129, 283, 374, 398 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 66 |
| AspLEI | GCGC | 1 cut(s) | 42 |
| AsuHPI | GGTGA | 3 cut(s) | 107, 134, 205 |
| BccI | CCATC | 3 cut(s) | 34, 78, 92 |
| BclI | TGATCA | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 371 |
| BfoI | RGCGCY | 1 cut(s) | 43 |
| BmiI | GGNNCC | 2 cut(s) | 9, 135 |
| BmrI | ACTGGG | 1 cut(s) | 83 |
| BmsI | GCATC | 1 cut(s) | 217 |
| BmuI | ACTGGG | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 1 cut(s) | 291 |
| Bse1I | ACTGG | 3 cut(s) | 78, 143, 220 |
| BseGI | GGATG | 1 cut(s) | 232 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseNI | ACTGG | 3 cut(s) | 78, 143, 220 |
| BseYI | CCCAGC | 2 cut(s) | 129, 256 |
| Bsp143I | GATC | 1 cut(s) | 13 |
| BspACI | CCGC | 1 cut(s) | 170 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspLI | GGNNCC | 2 cut(s) | 9, 135 |
| BsrBI | CCGCTC | 1 cut(s) | 172 |
| BsrI | ACTGG | 3 cut(s) | 78, 143, 220 |
| BssMI | GATC | 1 cut(s) | 13 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstF5I | GGATG | 1 cut(s) | 232 |
| BstH2I | RGCGCY | 1 cut(s) | 43 |
| BstHHI | GCGC | 1 cut(s) | 42 |
| BstKTI | GATC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 13 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 264 |
| BtsCI | GGATG | 1 cut(s) | 232 |
| CfoI | GCGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 293 |
| CviJI | RGCY | 5 cut(s) | 8, 129, 283, 374, 398 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 129, 283, 374, 398 |
| CviQI | GTAC | 1 cut(s) | 293 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 1 cut(s) | 15 |
| DpnII | GATC | 1 cut(s) | 13 |
| FbaI | TGATCA | 1 cut(s) | 13 |
| FokI | GGATG | 1 cut(s) | 239 |
| FspBI | CTAG | 1 cut(s) | 371 |
| GlaI | GCGC | 1 cut(s) | 41 |
| GsaI | CCCAGC | 2 cut(s) | 133, 260 |
| HaeII | RGCGCY | 1 cut(s) | 43 |
| HhaI | GCGC | 1 cut(s) | 42 |
| Hin6I | GCGC | 1 cut(s) | 40 |
| HinP1I | GCGC | 1 cut(s) | 40 |
| HinfI | GANTC | 1 cut(s) | 90 |
| HphI | GGTGA | 3 cut(s) | 107, 134, 205 |
| Hpy166II | GTNNAC | 1 cut(s) | 196 |
| Hpy188III | TCNNGA | 4 cut(s) | 11, 59, 308, 339 |
| Hpy8I | GTNNAC | 1 cut(s) | 196 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 295 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| HpySE526I | ACGT | 1 cut(s) | 295 |
| HspAI | GCGC | 1 cut(s) | 40 |
| Ksp22I | TGATCA | 1 cut(s) | 13 |
| Kzo9I | GATC | 1 cut(s) | 13 |
| LmnI | GCTCC | 2 cut(s) | 13, 288 |
| LpnPI | CCDG | 9 cut(s) | 24, 59, 115, 156, 201, 270, 298, 324, 408 |
| LweI | GCATC | 1 cut(s) | 217 |
| MaeI | CTAG | 1 cut(s) | 371 |
| MaeII | ACGT | 1 cut(s) | 295 |
| MalI | GATC | 1 cut(s) | 15 |
| MbiI | CCGCTC | 1 cut(s) | 172 |
| MboI | GATC | 1 cut(s) | 13 |
| MboII | GAAGA | 1 cut(s) | 247 |
| MluCI | AATT | 3 cut(s) | 62, 114, 412 |
| MlyI | GAGTC | 1 cut(s) | 99 |
| MnlI | CCTC | 2 cut(s) | 189, 297 |
| MroXI | GAANNNNTTC | 1 cut(s) | 66 |
| MseI | TTAA | 3 cut(s) | 111, 252, 415 |
| NdeII | GATC | 1 cut(s) | 13 |
| NlaIV | GGNNCC | 2 cut(s) | 9, 135 |
| PdmI | GAANNNNTTC | 1 cut(s) | 66 |
| PleI | GAGTC | 1 cut(s) | 98 |
| PpsI | GAGTC | 1 cut(s) | 98 |
| PspFI | CCCAGC | 2 cut(s) | 129, 256 |
| PspN4I | GGNNCC | 2 cut(s) | 9, 135 |
| RsaI | GTAC | 1 cut(s) | 294 |
| RsaNI | GTAC | 1 cut(s) | 293 |
| SaqAI | TTAA | 3 cut(s) | 111, 252, 415 |
| Sau3AI | GATC | 1 cut(s) | 13 |
| SchI | GAGTC | 1 cut(s) | 99 |
| SetI | ASST | 5 cut(s) | 131, 285, 298, 376, 400 |
| SfaNI | GCATC | 1 cut(s) | 217 |
| SmlI | CTYRAG | 1 cut(s) | 306 |
| SmoI | CTYRAG | 1 cut(s) | 306 |
| Sse9I | AATT | 3 cut(s) | 62, 114, 412 |
| SsiI | CCGC | 1 cut(s) | 170 |
| SspMI | CTAG | 1 cut(s) | 371 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TaiI | ACGT | 1 cut(s) | 298 |
| TasI | AATT | 3 cut(s) | 62, 114, 412 |
| Tru1I | TTAA | 3 cut(s) | 111, 252, 415 |
| Tru9I | TTAA | 3 cut(s) | 111, 252, 415 |
| TspDTI | ATGAA | 2 cut(s) | 363, 392 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 33 |
| XmnI | GAANNNNTTC | 1 cut(s) | 66 |
| XspI | CTAG | 1 cut(s) | 371 |