Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001086

Physical Location & Seq

Genomic Coordinates Reverse (-)

3618817 .. 3620157

Gene Structure 1341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0046000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGCATAGGGTTTCAATTATCCAAACCAAAGTCAACAATCACTACGAGTCTGTGAAGATGGAGAACCAGAACATCGACTCCATGGAGATGGATAAGTCCGGCCCTTCTTCTTCGAACGACGAGACCTCTTTCTCTGCGTTCTTCTCTGAAAAACGACAACTAGAGTTGCAAGACGTCTGGCCGGAGCTGGAGTCGTCTTTAGATGCCTATGGCATTTCATGCGCAATTAATCTTCCCCAGCGCTCAGTAACAATCTCAAGGACCCCAACGACCAAGGGTCGAAACTATTACGACAAGGCCAAGCGTGTCGTCGAACTTCTTGCAACAACTCAAGTGCCACCGCATCTGTCACTGGAAGTATTGAAAGGAAATTGGAGATTTCATACTCTAATTAAGACTGGGAATCAAGAAGGTGGGTTCTGCTCTAAGTTCGGCATCAGCCCGGACCAGTTTGCTAAACGAAGGGACTGGCTTGCCGGATCCCTAGAGGCAATTTCGGCATTGACGCTTTGTCATCTTTATGTTAATGAAAACACTGCCGCTGCGGTGGGTTCGGCTGCTTCGGTATTAGAGTTTAGGAGGATTGTGGAAAACTGCATTGTTAGTGATGTGAATCCGGCAGAGTCTAACAACAAGATTAAAAAGTTTTTGAGTTACAAAAAGCACGTGCTGCAGAAACGTGGGGTGGATTACACGGCAGTATTGGAGAAGTCTGGCATGAGTGAAGTGACATCTTTTGGTGCGTACGTCGCTAAAGGTCTTAGTAGGAATAAAGAGGTGGACCAAGCCTGGCCTTTTGTGGAGTCGTTTTTAGAACATTATGGCATTTCATGCACATTGCATAGGGTTCTTCGTTCCATGACATTTTCGACTACCAGAGTGACCAAAGATCCAGATGTTATGGACAGTGTTGGTGCTCTTCTTGAAGTTTTGGGAAGTACTAGTGTTCCGGGGTCGAAGGTGATACAGATATTGGACGGCCGGCTGCAGTATGAATTCATCAAGACGGGGTTTGAAAAGGGTGGGCTCTGCTCGAAATTTGATGGGATCGAGAAGGAGCTTGCTAGGAACAAGCAAAGATTGAAGCGCAACGCAAAGAACCTTGGAGACTTGTTGGTGTGTGATGTGTATATTGACAGAAGCAGTGTTGTTGTAGTGGGGAGTTGTGCGGCAGGGTTGAAGGAAATGAGGTCAATTGTGGAGCGGTGTCTGGTTAAAAATGAAGACCCTGCAACTGCGGTGAGGAGGCTAAGATCGTGTAATAAGAAACAGGGTAGTTTGAGATTATCTGATGAGAAGCAGGTCAGTTTGATGAAGAAGCTTGAGGGTCTGTGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001871 GO:0003674 GO:0003824 GO:0004338 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0008422 GO:0015926 GO:0016020 GO:0016787 GO:0016798 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17

Protein Analysis

446

Amino Acids

49.73

Weight (kDa)

9.01

Isoelectric Point (pI)

47.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_2nd	PF21800	149 - 217	3.8e-09	KRR1 small subunit processome component, second KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33220 AT5G20330 AT5G20340 AT5G20390 AT5G20560
fragaria_vesca	FvH4_1g08530 FvH4_7g03000
malus_domestica	MD00G1142700.v1.1 MD00G1142800.v1.1 MD02G1089200.v1.1 MD02G1089400.v1.1 MD02G1089600.v1.1 MD15G1216300.v1.1
prunus_persica	Prupe.7G200400_v2.0.a1 Prupe.7G200500_v2.0.a1 Prupe.7G200700_v2.0.a1
pyrus_communis	pycom02g07140
rosa_chinensis	RchiOBHm_Chr2g0094651 RchiOBHm_Chr2g0094671 RchiOBHm_Chr2g0094681 RchiOBHm_Chr2g0094691 RchiOBHm_Chr2g0094721 RchiOBHm_Chr6g0274281
rosa_laevigata	RLG00000013556 RLG00000016508 RLG00000016509 RLG00000016513
rosa_multiflora	Rmu_sc0004359.1_g000021 Rmu_sc0004359.1_g000026 Rmu_sc0004359.1_g000028 Rmu_sc0005132.1_g000025 Rmu_sc0006422.1_g000002 Rmu_sc0006422.1_g000003 Rmu_sc0006422.1_g000013
rosa_roxburghii	Rroxscaffold_2G00147000 Rroxscaffold_2G00147010 Rroxscaffold_2G00147020
rosa_rugosa	Rorug02G0045800 Rorug02G0046000 Rorug02G0046200 Rorug06G0080800
rosa_samantha	Rh2AG093400 Rh2AG093500 Rh2AG093600 Rh2BG093800 Rh2BG093900 Rh2BG094100 Rh2CG096300 Rh2CG096400 Rh2CG096500 Rh2DG092600 Rh2DG092700 Rh2DG092800 Rh2DG093000 Rh6AG195500
rosa_wichuraiana	Rw0G003530 Rw0G003540 Rw0G004780 Rw6G017110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	177
Acc16I	TGCGCA	1 cut(s)	223
Acc36I	ACCTGC	1 cut(s)	1291
AccBSI	CCGCTC	1 cut(s)	1204
AciI	CCGC	6 cut(s)	341, 540, 545, 1169, 1204, 1238
AclWI	GGATC	4 cut(s)	474, 487, 884, 1055
AcoI	YGGCCR	2 cut(s)	179, 979
AcsI	RAATTY	2 cut(s)	995, 1037
AcvI	CACGTG	1 cut(s)	667
AcyI	GRCGYC	1 cut(s)	174
AfaI	GTAC	2 cut(s)	746, 940
AfeI	AGCGCT	1 cut(s)	242
AgsI	TTSAA	6 cut(s)	15, 364, 926, 1016, 1084, 1180
AhdI	GACNNNNNGTC	2 cut(s)	276, 510
AhlI	ACTAGT	1 cut(s)	941
AjnI	CCWGG	1 cut(s)	788
AloI	GAACNNNNNNTCC	2 cut(s)	62, 94
AluBI	AGCT	3 cut(s)	187, 1060, 1321
AluI	AGCT	3 cut(s)	187, 1060, 1321
Alw21I	GWGCWC	1 cut(s)	919
Alw26I	GTCTC	2 cut(s)	116, 1101
AlwI	GGATC	4 cut(s)	474, 487, 884, 1055
Aor51HI	AGCGCT	1 cut(s)	242
AoxI	GGCC	5 cut(s)	100, 179, 297, 791, 979
ApeKI	GCWGC	4 cut(s)	542, 557, 670, 985
ApoI	RAATTY	2 cut(s)	995, 1037
AseI	ATTAAT	1 cut(s)	228
AspLEI	GCGC	3 cut(s)	224, 243, 1089
AspS9I	GGNCC	4 cut(s)	101, 261, 445, 781
AsuC2I	CCSGG	2 cut(s)	443, 951
AsuHPI	GGTGA	2 cut(s)	973, 1252
AsuII	TTCGAA	1 cut(s)	113
AvaII	GGWCC	3 cut(s)	261, 445, 781
BamHI	GGATCC	1 cut(s)	479
BanII	GRGCYC	1 cut(s)	1029
BbrPI	CACGTG	1 cut(s)	667
BbsI	GAAGAC	1 cut(s)	1230
Bbv12I	GWGCWC	1 cut(s)	919
BbvI	GCAGC	4 cut(s)	529, 544, 657, 972
BccI	CCATC	3 cut(s)	52, 82, 1037
BceAI	ACGGC	2 cut(s)	711, 994
BcgI	CGANNNNNNTGC	2 cut(s)	302, 336
BciT130I	CCWGG	1 cut(s)	790
BcnI	CCSGG	2 cut(s)	443, 951
BcoDI	GTCTC	2 cut(s)	116, 1101
BcuI	ACTAGT	1 cut(s)	941
BfaI	CTAG	4 cut(s)	161, 485, 942, 1065
BfmI	CTRYAG	2 cut(s)	671, 986
BfoI	RGCGCY	1 cut(s)	244
BfuAI	ACCTGC	1 cut(s)	1291
BisI	GCNGC	6 cut(s)	540, 543, 558, 671, 986, 1170
BlsI	GCNGC	6 cut(s)	541, 544, 559, 672, 987, 1171
BmcAI	AGTACT	1 cut(s)	940
Bme1390I	CCNGG	3 cut(s)	443, 790, 951
Bme18I	GGWCC	3 cut(s)	261, 445, 781
BmeRI	GACNNNNNGTC	2 cut(s)	276, 510
BmgT120I	GGNCC	4 cut(s)	101, 261, 445, 781
BmiI	GGNNCC	2 cut(s)	263, 481
BmrFI	CCNGG	3 cut(s)	443, 790, 951
BmrI	ACTGGG	1 cut(s)	408
BmsI	GCATC	3 cut(s)	193, 352, 444
BmuI	ACTGGG	1 cut(s)	408
BpiI	GAAGAC	1 cut(s)	1230
BpmI	CTGGAG	1 cut(s)	209
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	2 cut(s)	241, 315
BpuMI	CCSGG	2 cut(s)	443, 951
BsaAI	YACGTR	1 cut(s)	667
BsaBI	GATNNNNATC	1 cut(s)	612
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	116
BsaJI	CCNNGG	4 cut(s)	81, 273, 950, 1102
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 176, 206
Bse118I	RCCGGY	1 cut(s)	981
Bse1I	ACTGG	4 cut(s)	357, 403, 448, 473
Bse3DI	GCAATG	1 cut(s)	836
Bse8I	GATNNNNATC	1 cut(s)	612
BseBI	CCWGG	1 cut(s)	790
BseDI	CCNNGG	4 cut(s)	81, 273, 950, 1102
BseJI	GATNNNNATC	1 cut(s)	612
BseMI	GCAATG	1 cut(s)	836
BseMII	CTCAG	1 cut(s)	258
BseNI	ACTGG	4 cut(s)	357, 403, 448, 473
BseRI	GAGGAG	1 cut(s)	1258
BseX3I	CGGCCG	1 cut(s)	979
BseXI	GCAGC	4 cut(s)	529, 544, 657, 972
BseYI	CCCAGC	1 cut(s)	237
Bsh1285I	CGRYCG	1 cut(s)	982
BshFI	GGCC	5 cut(s)	102, 181, 299, 793, 981
BsiEI	CGRYCG	1 cut(s)	982
BsiHKAI	GWGCWC	1 cut(s)	919
BsiSI	CCGG	7 cut(s)	99, 182, 443, 477, 617, 950, 982
BsiWI	CGTACG	1 cut(s)	744
BslFI	GGGAC	1 cut(s)	479
BsmAI	GTCTC	2 cut(s)	116, 1101
BsmFI	GGGAC	1 cut(s)	479
BsnI	GGCC	5 cut(s)	102, 181, 299, 793, 981
Bso31I	GGTCTC	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	2 cut(s)	919, 1029
Bsp143I	GATC	4 cut(s)	479, 889, 1047, 1253
Bsp19I	CCATGG	1 cut(s)	81
BspACI	CCGC	6 cut(s)	341, 540, 545, 1169, 1204, 1238
BspANI	GGCC	5 cut(s)	102, 181, 299, 793, 981
BspCNI	CTCAG	1 cut(s)	257
BspLI	GGNNCC	2 cut(s)	263, 481
BspMAI	CTGCAG	2 cut(s)	675, 990
BspMI	ACCTGC	1 cut(s)	1291
BspPI	GGATC	4 cut(s)	474, 487, 884, 1055
BspQI	GCTCTTC	1 cut(s)	924
BspT104I	TTCGAA	1 cut(s)	113
BspTNI	GGTCTC	1 cut(s)	116
BsrBI	CCGCTC	1 cut(s)	1204
BsrDI	GCAATG	1 cut(s)	836
BsrFI	RCCGGY	1 cut(s)	981
BsrI	ACTGG	4 cut(s)	357, 403, 448, 473
BssAI	RCCGGY	1 cut(s)	981
BssECI	CCNNGG	4 cut(s)	81, 273, 950, 1102
BssMI	GATC	4 cut(s)	479, 889, 1047, 1253
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	3 cut(s)	81, 273, 1102
Bst2UI	CCWGG	1 cut(s)	790
Bst4CI	ACNGT	1 cut(s)	908
Bst6I	CTCTTC	1 cut(s)	924
BstACI	GRCGYC	1 cut(s)	174
BstAPI	GCANNNNNTGC	3 cut(s)	219, 670, 831
BstBAI	YACGTR	1 cut(s)	667
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	3 cut(s)	474, 983, 1062
BstDEI	CTNAG	4 cut(s)	244, 426, 761, 1250
BstDSI	CCRYGG	1 cut(s)	81
BstH2I	RGCGCY	1 cut(s)	244
BstHHI	GCGC	3 cut(s)	224, 243, 1089
BstKTI	GATC	4 cut(s)	482, 892, 1050, 1256
BstMAI	GTCTC	2 cut(s)	116, 1101
BstMBI	GATC	4 cut(s)	479, 889, 1047, 1253
BstMCI	CGRYCG	1 cut(s)	982
BstMWI	GCNNNNNNNGC	5 cut(s)	219, 497, 670, 749, 831
BstNI	CCWGG	1 cut(s)	790
BstSCI	CCNGG	3 cut(s)	441, 788, 949
BstSFI	CTRYAG	2 cut(s)	671, 986
BstV1I	GCAGC	4 cut(s)	529, 544, 657, 972
BstV2I	GAAGAC	1 cut(s)	1230
BstX2I	RGATCY	2 cut(s)	479, 889
BstXI	CCANNNNNNTGG	1 cut(s)	88
BstYI	RGATCY	2 cut(s)	479, 889
BstZI	CGGCCG	1 cut(s)	979
BsuRI	GGCC	5 cut(s)	102, 181, 299, 793, 981
BtgI	CCRYGG	1 cut(s)	81
BtsI	GCAGTG	2 cut(s)	534, 1150
BtsIMutI	CAGTG	4 cut(s)	350, 534, 913, 1150
BveI	ACCTGC	1 cut(s)	1291
Cac8I	GCNNGC	3 cut(s)	474, 983, 1062
CfoI	GCGC	3 cut(s)	224, 243, 1089
Cfr10I	RCCGGY	1 cut(s)	981
Cfr13I	GGNCC	4 cut(s)	101, 261, 445, 781
CseI	GACGC	1 cut(s)	514
Csp6I	GTAC	2 cut(s)	745, 939
CviAII	CATG	5 cut(s)	82, 219, 718, 831, 859
CviQI	GTAC	2 cut(s)	745, 939
DdeI	CTNAG	4 cut(s)	244, 426, 761, 1250
DpnI	GATC	4 cut(s)	481, 891, 1049, 1255
DpnII	GATC	4 cut(s)	479, 889, 1047, 1253
DriI	GACNNNNNGTC	2 cut(s)	276, 510
EaeI	YGGCCR	2 cut(s)	179, 979
EagI	CGGCCG	1 cut(s)	979
Eam1104I	CTCTTC	1 cut(s)	924
Eam1105I	GACNNNNNGTC	2 cut(s)	276, 510
EarI	CTCTTC	1 cut(s)	924
EclXI	CGGCCG	1 cut(s)	979
Eco130I	CCWWGG	3 cut(s)	81, 273, 1102
Eco24I	GRGCYC	1 cut(s)	1029
Eco31I	GGTCTC	1 cut(s)	116
Eco47I	GGWCC	3 cut(s)	261, 445, 781
Eco47III	AGCGCT	1 cut(s)	242
Eco52I	CGGCCG	1 cut(s)	979
Eco72I	CACGTG	1 cut(s)	667
EcoO109I	RGGNCCY	1 cut(s)	261
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	1 cut(s)	788
EcoT14I	CCWWGG	3 cut(s)	81, 273, 1102
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	1029
ErhI	CCWWGG	3 cut(s)	81, 273, 1102
FaeI	CATG	5 cut(s)	85, 222, 721, 834, 862
FaqI	GGGAC	1 cut(s)	479
FatI	CATG	5 cut(s)	81, 218, 717, 830, 858
Fnu4HI	GCNGC	6 cut(s)	540, 543, 558, 671, 986, 1170
FriOI	GRGCYC	1 cut(s)	1029
Fsp4HI	GCNGC	6 cut(s)	540, 543, 558, 671, 986, 1170
FspBI	CTAG	4 cut(s)	161, 485, 942, 1065
FspI	TGCGCA	1 cut(s)	223
GlaI	GCGC	3 cut(s)	223, 242, 1088
GluI	GCNGC	6 cut(s)	540, 543, 558, 671, 986, 1170
GsaI	CCCAGC	1 cut(s)	241
GsuI	CTGGAG	1 cut(s)	209
HaeII	RGCGCY	1 cut(s)	244
HaeIII	GGCC	5 cut(s)	102, 181, 299, 793, 981
HapII	CCGG	7 cut(s)	99, 182, 443, 477, 617, 950, 982
HgaI	GACGC	1 cut(s)	514
HhaI	GCGC	3 cut(s)	224, 243, 1089
Hin1I	GRCGYC	1 cut(s)	174
Hin1II	CATG	5 cut(s)	85, 222, 721, 834, 862
Hin6I	GCGC	3 cut(s)	222, 241, 1087
HinP1I	GCGC	3 cut(s)	222, 241, 1087
HincII	GTYRAC	1 cut(s)	34
HindII	GTYRAC	1 cut(s)	34
HindIII	AAGCTT	1 cut(s)	1319
HinfI	GANTC	7 cut(s)	47, 77, 191, 403, 613, 623, 803
HpaII	CCGG	7 cut(s)	99, 182, 443, 477, 617, 950, 982
HphI	GGTGA	2 cut(s)	973, 1252
Hpy166II	GTNNAC	2 cut(s)	34, 781
Hpy188I	TCNGA	2 cut(s)	148, 1291
Hpy188III	TCNNGA	5 cut(s)	407, 893, 923, 1003, 1051
Hpy8I	GTNNAC	2 cut(s)	34, 781
Hpy99I	CGWCG	3 cut(s)	122, 314, 752
HpyAV	CCTTC	6 cut(s)	114, 404, 456, 952, 1048, 1174
HpyCH4III	ACNGT	1 cut(s)	908
HpyCH4IV	ACGT	4 cut(s)	174, 666, 679, 747
HpyCH4V	TGCA	9 cut(s)	4, 169, 323, 597, 673, 834, 841, 988, 1232
HpyF10VI	GCNNNNNNNGC	5 cut(s)	219, 497, 670, 749, 831
HpyF3I	CTNAG	4 cut(s)	244, 426, 761, 1250
HpySE526I	ACGT	4 cut(s)	174, 666, 679, 747
Hsp92I	GRCGYC	1 cut(s)	174
Hsp92II	CATG	5 cut(s)	85, 222, 721, 834, 862
HspAI	GCGC	3 cut(s)	222, 241, 1087
KroI	GCCGGC	1 cut(s)	981
KroNI	GCCGGC	1 cut(s)	983
Kzo9I	GATC	4 cut(s)	479, 889, 1047, 1253
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	3 cut(s)	184, 1057, 1201
Lsp1109I	GCAGC	4 cut(s)	529, 544, 657, 972
LweI	GCATC	3 cut(s)	193, 352, 444
MaeI	CTAG	4 cut(s)	161, 485, 942, 1065
MaeII	ACGT	4 cut(s)	174, 666, 679, 747
MaeIII	GTNAC	5 cut(s)	247, 348, 653, 727, 880
MalI	GATC	4 cut(s)	481, 891, 1049, 1255
MbiI	CCGCTC	1 cut(s)	1204
MboI	GATC	4 cut(s)	479, 889, 1047, 1253
MboII	GAAGA	9 cut(s)	67, 99, 102, 133, 224, 842, 911, 1235, 1327
MfeI	CAATTG	1 cut(s)	1194
MflI	RGATCY	2 cut(s)	479, 889
MhlI	GDGCHC	2 cut(s)	919, 1029
MluCI	AATT	8 cut(s)	15, 225, 370, 390, 492, 995, 1037, 1194
MlyI	GAGTC	5 cut(s)	56, 71, 200, 632, 812
MnlI	CCTC	8 cut(s)	136, 481, 573, 769, 1182, 1236, 1239, 1318
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	981
MseI	TTAA	5 cut(s)	228, 393, 525, 639, 1215
MslI	CAYNNNNRTG	2 cut(s)	86, 519
MspA1I	CMGCKG	1 cut(s)	542
MspI	CCGG	7 cut(s)	99, 182, 443, 477, 617, 950, 982
MspR9I	CCNGG	3 cut(s)	443, 790, 951
MunI	CAATTG	1 cut(s)	1194
MvaI	CCWGG	1 cut(s)	790
MwoI	GCNNNNNNNGC	5 cut(s)	219, 497, 670, 749, 831
NaeI	GCCGGC	1 cut(s)	983
NciI	CCSGG	2 cut(s)	443, 951
NcoI	CCATGG	1 cut(s)	81
NdeII	GATC	4 cut(s)	479, 889, 1047, 1253
NgoMIV	GCCGGC	1 cut(s)	981
NlaIII	CATG	5 cut(s)	85, 222, 721, 834, 862
NlaIV	GGNNCC	2 cut(s)	263, 481
NmuCI	GTSAC	3 cut(s)	348, 727, 880
NsbI	TGCGCA	1 cut(s)	223
NsiI	ATGCAT	1 cut(s)	6
NspV	TTCGAA	1 cut(s)	113
PciSI	GCTCTTC	1 cut(s)	924
PdiI	GCCGGC	1 cut(s)	983
PfeI	GAWTC	2 cut(s)	403, 613
Pfl23II	CGTACG	1 cut(s)	744
PkrI	GCNGC	6 cut(s)	541, 544, 559, 672, 987, 1171
PleI	GAGTC	5 cut(s)	55, 71, 199, 631, 811
PmaCI	CACGTG	1 cut(s)	667
PmlI	CACGTG	1 cut(s)	667
PpsI	GAGTC	5 cut(s)	55, 71, 199, 631, 811
Ppu21I	YACGTR	1 cut(s)	667
PpuMI	RGGWCCY	1 cut(s)	261
PshBI	ATTAAT	1 cut(s)	228
Psp5II	RGGWCCY	1 cut(s)	261
Psp6I	CCWGG	1 cut(s)	788
PspCI	CACGTG	1 cut(s)	667
PspFI	CCCAGC	1 cut(s)	237
PspGI	CCWGG	1 cut(s)	788
PspLI	CGTACG	1 cut(s)	744
PspN4I	GGNNCC	2 cut(s)	263, 481
PspPI	GGNCC	4 cut(s)	101, 261, 445, 781
PspPPI	RGGWCCY	1 cut(s)	261
PstI	CTGCAG	2 cut(s)	675, 990
PsuI	RGATCY	2 cut(s)	479, 889
RsaI	GTAC	2 cut(s)	746, 940
RsaNI	GTAC	2 cut(s)	745, 939
RseI	CAYNNNNRTG	2 cut(s)	86, 519
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	5 cut(s)	228, 393, 525, 639, 1215
SatI	GCNGC	6 cut(s)	540, 543, 558, 671, 986, 1170
Sau3AI	GATC	4 cut(s)	479, 889, 1047, 1253
Sau96I	GGNCC	4 cut(s)	101, 261, 445, 781
ScaI	AGTACT	1 cut(s)	940
SchI	GAGTC	5 cut(s)	56, 71, 200, 632, 812
ScrFI	CCNGG	3 cut(s)	443, 790, 951
SduI	GDGCHC	2 cut(s)	919, 1029
SfaNI	GCATC	3 cut(s)	193, 352, 444
SfcI	CTRYAG	2 cut(s)	671, 986
SfuI	TTCGAA	1 cut(s)	113
SinI	GGWCC	3 cut(s)	261, 445, 781
SmiMI	CAYNNNNRTG	2 cut(s)	86, 519
SmlI	CTYRAG	3 cut(s)	256, 330, 1322
SmoI	CTYRAG	3 cut(s)	256, 330, 1322
SpeI	ACTAGT	1 cut(s)	941
Sse9I	AATT	8 cut(s)	15, 225, 370, 390, 492, 995, 1037, 1194
SsiI	CCGC	6 cut(s)	341, 540, 545, 1169, 1204, 1238
SspMI	CTAG	4 cut(s)	161, 485, 942, 1065
StyD4I	CCNGG	3 cut(s)	441, 788, 949
StyI	CCWWGG	3 cut(s)	81, 273, 1102
TaaI	ACNGT	1 cut(s)	908
TaiI	ACGT	4 cut(s)	177, 669, 682, 750
TaqI	TCGA	8 cut(s)	75, 113, 280, 312, 869, 956, 1034, 1050
TasI	AATT	8 cut(s)	15, 225, 370, 390, 492, 995, 1037, 1194
TatI	WGTACW	1 cut(s)	938
TauI	GCSGC	2 cut(s)	542, 1172
TfiI	GAWTC	2 cut(s)	403, 613
Tru1I	TTAA	5 cut(s)	228, 393, 525, 639, 1215
Tru9I	TTAA	5 cut(s)	228, 393, 525, 639, 1215
TscAI	CASTG	4 cut(s)	357, 541, 913, 1150
TseFI	GTSAC	3 cut(s)	348, 727, 880
TseI	GCWGC	4 cut(s)	542, 557, 670, 985
Tsp45I	GTSAC	3 cut(s)	348, 727, 880
TspDTI	ATGAA	8 cut(s)	207, 371, 543, 819, 988, 1008, 1236, 1328
TspRI	CASTG	4 cut(s)	357, 541, 913, 1150
VpaK11BI	GGWCC	3 cut(s)	261, 445, 781
VspI	ATTAAT	1 cut(s)	228
XapI	RAATTY	2 cut(s)	995, 1037
XspI	CTAG	4 cut(s)	161, 485, 942, 1065
ZraI	GACGTC	1 cut(s)	175
ZrmI	AGTACT	1 cut(s)	940
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.