Rorug05G0310800

Transcription elongation factor B polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000297
Physical Location & Seq
Reverse (-)
36532678 .. 36535463
2786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0310800.1

Sequence Viewer

Length: 1710 bp
ATGTCTATGGCTACAGATCCTTCCCCATCAAGTCAAGTACCACAAATTGCTAAGCCTGAAATTGTTCGCCAGACAGCGAATTTTCAACCAAGCATTTGGGGAGATCAGTTCATCAACTATGATTCTCAAGACATTACTGAGGCCCTTTGGCAACAAGAAGTCGAGGAACTGAAAGTAGTAGTGAAGAGGGAAGTATTTACAAATGGGAAAGGTGATTTTTCCCATCAACTCAAGTTGATCGATGCAATCCAACGCCTTGGCGTGGCATACCATTTTGAACAAGAAATAGAATATGCACTGCAACACATCCATGCTACATATCATGATCAGGATCACTACCGTGATAATGGCGATCTTTACACTACTGCGCTATGTTTCCGATTGCTAAGGCAACATGGATATGATATCTCATCTGATATATTCAACAAGTTCAAACATGCAAATGGTAGCTTCAAAGAAGGCTTAGTTGTCGATGGGTCAGCTATGCTGAGCCTCTACGAAGCTGCACATCTTAAGGTTCATGGAGAAGATATACTAGAAGAGGCTCTTGTTTTCACCACTACTCACCTCGAGTCCGCAAAATCCAATGCGTGCTATGGAGTACAAATGACTGAACAAATCACTCAAGCCTTGGCGAGACCTCTGCGAAAAAGTCTAGAGAGGATATGTGCCAAGCGACACATGTCAATTTACCAACATGAAGATGAAGCCTCACTCATCAACCACAGTGAAGCTTTATTGAGACTTGTAAAGTTGGATTTCAATCTTGTTCAGTCTTTACACAAAAAAGAGTTGTGTGAAATTACTAGGTGGTGGAAAGAACTAGACTTTGAAAGGAAATTGCCTTTTGCAAGAGACAGGAAGGTGGAGTTGTTCTTTTGGATAGTGGGAGTATATTTTGAACCCCAGTACTCTACTGGCAGAACCATTATGACAAAAGTGTCTATCCTCCTAACTGTTTTGGATGATATATATGACGCATATGGTACATTTGAAGAACTCGTGATCTTTACTGAAGCAATTGACAGGTGGGATGTCAAATGCATAGATGAGCTCCCGGACTATTTGAAAATATTCTATCATGAACTTTTGAATCTTTTCAATGATATTGACAAAGTGATGTCAAAGGAAGGAAAATCTTACCGAGTTTGCTACGCAATACAAGCTATGAAAAATCAAGCTCGATCGTATTTCAACGAGGCTCAATGGTTGCACGAAGGATACACTCCAAGCATTGAGGAGTATATGAGGGTTGCAACAGGTTCTATAAGTTACACTTTTCTAACAACCATTTCATTACTCGGCATGGGAGATATTGTAACAAAGGATGCATTTGAGTGGTTGTTGAATGACCCGAAAATTGTTAGAGCTTCCAATATCATTTTTAGGCTTATGGATGACATTGTTTCCACCAAGTTTGAGAAAGAGAGAGAGCATGCACCTTCAAGCATTGATTGCTATATGAAGCAATATAGTGTTTCAGAGCAAGAGACAATTGATATTTTCAACAAACAAATTGTGGAATCATGGAAAGATATAAACGAGGAGTTTCTTAAACCAACTGCCGTGCCAATATCGGTTCTTATGCCCGTTCTCAATTTAACAAGAGTTGCAGATCTCCTTTATAAGGGAGAAGATGGATTCACTCGGGTTGGGAAGATGACCAAAGATAGTGTTGCTGCAGTTATTATCGATCCAGTGCCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Elongin_A

Protein Analysis

569

Amino Acids

65.82

Weight (kDa)

5.24

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 32 - 211 5e-57 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 273 - 512 8.2e-97 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 313 - 512 5e-57 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000297)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G42780 AT2G42780
fragaria_vesca FvH4_6g37640 FvH4_6g37640 FvH4_7g18970 FvH4_7g19430 FvH4_7g20490
malus_domestica MD04G1219900.v1.1 MD09G1156600.v1.1 MD11G1064800.v1.1 MD17G1143100.v1.1
prunus_persica Prupe.3G169700_v2.0.a1 Prupe.3G169700_v2.0.a1 Prupe.3G169700_v2.0.a1 Prupe.3G169700_v2.0.a1
pyrus_communis pycom09g07530 pycom11g05390 pycom12g21760 pycom17g13620
rosa_chinensis RchiOBHm_Chr1g0363261 RchiOBHm_Chr1g0363291 RchiOBHm_Chr1g0363311 RchiOBHm_Chr1g0363471 RchiOBHm_Chr1g0363891 RchiOBHm_Chr1g0377321 RchiOBHm_Chr2g0097481 RchiOBHm_Chr2g0101011 RchiOBHm_Chr2g0137701 RchiOBHm_Chr2g0150641 RchiOBHm_Chr2g0150701 RchiOBHm_Chr3g0476421 RchiOBHm_Chr5g0057921 RchiOBHm_Chr5g0057931 RchiOBHm_Chr5g0057951 RchiOBHm_Chr5g0057981 RchiOBHm_Chr5g0058001 RchiOBHm_Chr5g0058031 RchiOBHm_Chr5g0058051 RchiOBHm_Chr5g0058081 RchiOBHm_Chr5g0058101
rosa_laevigata RLG00000017036 RLG00000019670 RLG00000020502 RLG00000023768 RLG00000027563 RLG00000027575 RLG00000027577 RLG00000027578 RLG00000034860 RLG00000035193
rosa_multiflora Rmu_co8175074.1_g000001 Rmu_sc0000367.1_g000008 Rmu_sc0001862.1_g000004 Rmu_sc0001944.1_g000004 Rmu_sc0002483.1_g000004 Rmu_sc0004027.1_g000010 Rmu_sc0004458.1_g000001 Rmu_sc0004556.1_g000009 Rmu_sc0007226.1_g000008 Rmu_sc0011095.1_g000003 Rmu_sc0027954.1_g000002 Rmu_sc0028722.1_g000001
rosa_roxburghii Rroxscaffold_1G00022510 Rroxscaffold_1G00028200 Rroxscaffold_2G00097050 Rroxscaffold_2G00106910 Rroxscaffold_2G00106930 Rroxscaffold_2G00141650 Rroxscaffold_4G00293150 Rroxscaffold_4G00293320 Rroxscaffold_6G00405280
rosa_rugosa Rorug01G0305900 Rorug01G0306000 Rorug01G0306200 Rorug01G0307100 Rorug01G0307100 Rorug01G0307200 Rorug01G0310800 Rorug01G0402700 Rorug02G0095200 Rorug02G0344100.1 Rorug02G0421900 Rorug02G0422000 Rorug02G0422100 Rorug02G0422200 Rorug03G0154300 Rorug05G0310800 Rorug05G0310900 Rorug05G0337400
rosa_samantha Rh1AG314800 Rh1AG315000 Rh1AG316200 Rh1AG318700 Rh1AG420300 Rh1DG309100 Rh1DG309300 Rh1DG310600 Rh1DG313200 Rh1DG410200 Rh2AG142500 Rh2AG392100 Rh2AG481600 Rh2BG147600 Rh2BG399400 Rh2BG399600 Rh2BG493800 Rh2DG502800 Rh3BG237100 Rh3CG231600 Rh5BG390600 Rh5DG405200
rosa_wichuraiana Rw1G027900 Rw1G027910 Rw1G028000 Rw1G036850 Rw2G011180 Rw2G032110 Rw2G032120 Rw2G039370 Rw2G039510 Rw3G018680 Rw5G035730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1626
AasI GACNNNNNNGTC 1 cut(s) 940
AciI CCGC 1 cut(s) 576
AclWI GGATC 3 cut(s) 11, 339, 1688
AcsI RAATTY 1 cut(s) 79
AcuI CTGAAG 1 cut(s) 1035
AfaI GTAC 4 cut(s) 39, 603, 911, 988
AfiI CCNNNNNNNGG 2 cut(s) 262, 1627
AflII CTTAAG 1 cut(s) 512
AflIII ACRYGT 1 cut(s) 681
AleI CACNNNNGTG 1 cut(s) 339
AluBI AGCT 8 cut(s) 450, 482, 503, 734, 1054, 1166, 1181, 1370
AluI AGCT 8 cut(s) 450, 482, 503, 734, 1054, 1166, 1181, 1370
Alw21I GWGCWC 1 cut(s) 1056
Alw26I GTCTC 4 cut(s) 631, 736, 849, 1484
AlwI GGATC 3 cut(s) 11, 339, 1688
Ama87I CYCGRG 2 cut(s) 569, 1647
AoxI GGCC 1 cut(s) 141
ApeKI GCWGC 2 cut(s) 503, 1679
ApoI RAATTY 1 cut(s) 79
Asp700I GAANNNNTTC 3 cut(s) 63, 1073, 1097
AspLEI GCGC 1 cut(s) 370
AspS9I GGNCC 1 cut(s) 142
AsuC2I CCSGG 1 cut(s) 1058
AsuHPI GGTGA 3 cut(s) 224, 547, 557
AvaI CYCGRG 2 cut(s) 569, 1647
BanII GRGCYC 1 cut(s) 1056
BauI CACGAG 1 cut(s) 1001
Bbv12I GWGCWC 1 cut(s) 1056
BbvI GCAGC 2 cut(s) 490, 1666
BccI CCATC 4 cut(s) 34, 231, 467, 1631
BceAI ACGGC 1 cut(s) 1550
BcgI CGANNNNNNTGC 2 cut(s) 625, 659
BciVI GTATCC 1 cut(s) 1214
BclI TGATCA 1 cut(s) 325
BcnI CCSGG 1 cut(s) 1058
BcoDI GTCTC 4 cut(s) 631, 736, 849, 1484
BfaI CTAG 4 cut(s) 536, 656, 807, 824
BfmI CTRYAG 2 cut(s) 12, 1680
BfrI CTTAAG 1 cut(s) 512
BfuI GTATCC 1 cut(s) 1214
BglII AGATCT 1 cut(s) 1615
BisI GCNGC 2 cut(s) 504, 1680
BlpI GCTNAGC 2 cut(s) 51, 488
BlsI GCNGC 2 cut(s) 505, 1681
BmcAI AGTACT 1 cut(s) 911
Bme1390I CCNGG 1 cut(s) 1058
BmeT110I CYCGRG 2 cut(s) 569, 1647
BmgT120I GGNCC 1 cut(s) 142
BmrFI CCNGG 1 cut(s) 1058
BmrI ACTGGG 1 cut(s) 901
BmsI GCATC 2 cut(s) 232, 1318
BmuI ACTGGG 1 cut(s) 901
BoxI GACNNNNGTC 1 cut(s) 682
Bpu10I CCTNAGC 1 cut(s) 386
Bpu1102I GCTNAGC 2 cut(s) 51, 488
BpuEI CTTGAG 3 cut(s) 111, 215, 609
BpuMI CCSGG 1 cut(s) 1058
Bsa29I ATCGAT 2 cut(s) 240, 1692
BsaBI GATNNNNATC 2 cut(s) 330, 762
BsaI GGTCTC 1 cut(s) 631
BsaJI CCNNGG 2 cut(s) 256, 630
BsaXI ACNNNNNCTCC 2 cut(s) 1302, 1332
Bsc4I CCNNNNNNNGG 2 cut(s) 262, 1627
Bse1I ACTGG 3 cut(s) 907, 922, 1697
Bse8I GATNNNNATC 2 cut(s) 330, 762
BseCI ATCGAT 2 cut(s) 240, 1692
BseDI CCNNGG 2 cut(s) 256, 630
BseGI GGATG 5 cut(s) 306, 970, 1039, 1333, 1402
BseJI GATNNNNATC 2 cut(s) 330, 762
BseLI CCNNNNNNNGG 2 cut(s) 262, 1627
BseMII CTCAG 2 cut(s) 129, 479
BseNI ACTGG 3 cut(s) 907, 922, 1697
BseRI GAGGAG 2 cut(s) 1253, 1559
BseXI GCAGC 2 cut(s) 490, 1666
BsgI GTGCAG 1 cut(s) 489
Bsh1285I CGRYCG 1 cut(s) 1187
BshFI GGCC 1 cut(s) 143
BshVI ATCGAT 2 cut(s) 240, 1692
BsiEI CGRYCG 1 cut(s) 1187
BsiHKAI GWGCWC 1 cut(s) 1056
BsiHKCI CYCGRG 2 cut(s) 569, 1647
BsiSI CCGG 1 cut(s) 1058
BslI CCNNNNNNNGG 2 cut(s) 262, 1627
BsmAI GTCTC 4 cut(s) 631, 736, 849, 1484
BsnI GGCC 1 cut(s) 143
Bso31I GGTCTC 1 cut(s) 631
BsoBI CYCGRG 2 cut(s) 569, 1647
Bsp1286I GDGCHC 1 cut(s) 1056
Bsp1720I GCTNAGC 2 cut(s) 51, 488
BspACI CCGC 1 cut(s) 576
BspANI GGCC 1 cut(s) 143
BspCNI CTCAG 2 cut(s) 130, 480
BspDI ATCGAT 2 cut(s) 240, 1692
BspHI TCATGA 2 cut(s) 322, 1081
BspMAI CTGCAG 1 cut(s) 1684
BspPI GGATC 3 cut(s) 11, 339, 1688
BspTI CTTAAG 1 cut(s) 512
BspTNI GGTCTC 1 cut(s) 631
BsrI ACTGG 3 cut(s) 907, 922, 1697
BssECI CCNNGG 2 cut(s) 256, 630
BssSI CACGAG 1 cut(s) 1001
BssT1I CCWWGG 2 cut(s) 256, 630
Bst2BI CACGAG 1 cut(s) 1001
Bst4CI ACNGT 4 cut(s) 341, 728, 958, 1707
Bst6I CTCTTC 2 cut(s) 179, 534
BstAFI CTTAAG 1 cut(s) 512
BstAPI GCANNNNNTGC 1 cut(s) 1455
BstC8I GCNNGC 2 cut(s) 592, 1437
BstDEI CTNAG 5 cut(s) 51, 138, 386, 463, 488
BstENI CCTNNNNNAGG 1 cut(s) 1625
BstF5I GGATG 5 cut(s) 306, 970, 1039, 1333, 1402
BstHHI GCGC 1 cut(s) 370
BstMAI GTCTC 4 cut(s) 631, 736, 849, 1484
BstMCI CGRYCG 1 cut(s) 1187
BstMWI GCNNNNNNNGC 2 cut(s) 1163, 1455
BstNSI RCATGY 3 cut(s) 440, 685, 1439
BstPAI GACNNNNGTC 1 cut(s) 682
BstSCI CCNGG 1 cut(s) 1056
BstSFI CTRYAG 2 cut(s) 12, 1680
BstV1I GCAGC 2 cut(s) 490, 1666
BstX2I RGATCY 2 cut(s) 16, 1615
BstXI CCANNNNNNTGG 2 cut(s) 96, 257
BstYI RGATCY 2 cut(s) 16, 1615
Bsu15I ATCGAT 2 cut(s) 240, 1692
BsuI GTATCC 1 cut(s) 1214
BsuRI GGCC 1 cut(s) 143
BsuTUI ATCGAT 2 cut(s) 240, 1692
BtsCI GGATG 5 cut(s) 306, 970, 1039, 1333, 1402
BtsI GCAGTG 1 cut(s) 296
BtsIMutI CAGTG 4 cut(s) 296, 733, 1703, 1704
Cac8I GCNNGC 2 cut(s) 592, 1437
CciI TCATGA 2 cut(s) 322, 1081
CfoI GCGC 1 cut(s) 370
Cfr13I GGNCC 1 cut(s) 142
ClaI ATCGAT 2 cut(s) 240, 1692
CseI GACGC 1 cut(s) 986
Csp6I GTAC 4 cut(s) 38, 602, 910, 987
CspCI CAANNNNNGTGG 2 cut(s) 1399, 1434
CviQI GTAC 4 cut(s) 38, 602, 910, 987
DdeI CTNAG 5 cut(s) 51, 138, 386, 463, 488
DrdI GACNNNNNNGTC 1 cut(s) 940
DseDI GACNNNNNNGTC 1 cut(s) 940
Eam1104I CTCTTC 2 cut(s) 179, 534
EarI CTCTTC 2 cut(s) 179, 534
Ecl136II GAGCTC 1 cut(s) 1054
Eco130I CCWWGG 2 cut(s) 256, 630
Eco24I GRGCYC 1 cut(s) 1056
Eco31I GGTCTC 1 cut(s) 631
Eco32I GATATC 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 1054
Eco57I CTGAAG 1 cut(s) 1035
Eco88I CYCGRG 2 cut(s) 569, 1647
EcoICRI GAGCTC 1 cut(s) 1054
EcoNI CCTNNNNNAGG 1 cut(s) 1625
EcoO109I RGGNCCY 1 cut(s) 142
EcoRV GATATC 1 cut(s) 406
EcoT14I CCWWGG 2 cut(s) 256, 630
EcoT22I ATGCAT 2 cut(s) 1046, 1333
EcoT38I GRGCYC 1 cut(s) 1056
ErhI CCWWGG 2 cut(s) 256, 630
FalI AAGNNNNNCTT 4 cut(s) 531, 563, 1261, 1293
FauNDI CATATG 1 cut(s) 982
FbaI TGATCA 1 cut(s) 325
Fnu4HI GCNGC 2 cut(s) 504, 1680
FokI GGATG 5 cut(s) 293, 977, 1046, 1340, 1409
FriOI GRGCYC 1 cut(s) 1056
Fsp4HI GCNGC 2 cut(s) 504, 1680
FspBI CTAG 4 cut(s) 536, 656, 807, 824
GlaI GCGC 1 cut(s) 369
GluI GCNGC 2 cut(s) 504, 1680
HaeIII GGCC 1 cut(s) 143
HapII CCGG 1 cut(s) 1058
HgaI GACGC 1 cut(s) 986
HhaI GCGC 1 cut(s) 370
Hin6I GCGC 1 cut(s) 368
HinP1I GCGC 1 cut(s) 368
HindIII AAGCTT 1 cut(s) 732
HinfI GANTC 5 cut(s) 122, 572, 1093, 1523, 1641
HpaII CCGG 1 cut(s) 1058
HphI GGTGA 3 cut(s) 224, 547, 557
Hpy188I TCNGA 3 cut(s) 380, 415, 1483
Hpy188III TCNNGA 6 cut(s) 128, 323, 329, 656, 1003, 1082
HpyAV CCTTC 6 cut(s) 30, 452, 856, 1124, 1211, 1452
HpyCH4III ACNGT 4 cut(s) 341, 728, 958, 1707
HpyF10VI GCNNNNNNNGC 2 cut(s) 1163, 1455
HpyF3I CTNAG 5 cut(s) 51, 138, 386, 463, 488
HspAI GCGC 1 cut(s) 368
Ksp22I TGATCA 1 cut(s) 325
LmnI GCTCC 1 cut(s) 1059
LpnPI CCDG 9 cut(s) 69, 83, 314, 844, 903, 920, 1012, 1071, 1245
Lsp1109I GCAGC 2 cut(s) 490, 1666
LweI GCATC 2 cut(s) 232, 1318
MaeI CTAG 4 cut(s) 536, 656, 807, 824
MaeIII GTNAC 2 cut(s) 1271, 1318
MboII GAAGA 7 cut(s) 196, 539, 551, 713, 1007, 1646, 1669
MfeI CAATTG 2 cut(s) 1020, 1494
MflI RGATCY 2 cut(s) 16, 1615
MhlI GDGCHC 1 cut(s) 1056
MlyI GAGTC 1 cut(s) 581
MmeI TCCRAC 2 cut(s) 274, 735
Mph1103I ATGCAT 2 cut(s) 1046, 1333
MroXI GAANNNNTTC 3 cut(s) 63, 1073, 1097
MseI TTAA 3 cut(s) 513, 1554, 1601
MslI CAYNNNNRTG 6 cut(s) 309, 339, 399, 441, 702, 1336
MspCI CTTAAG 1 cut(s) 512
MspI CCGG 1 cut(s) 1058
MspR9I CCNGG 1 cut(s) 1058
MunI CAATTG 2 cut(s) 1020, 1494
MwoI GCNNNNNNNGC 2 cut(s) 1163, 1455
NciI CCSGG 1 cut(s) 1058
NdeI CATATG 1 cut(s) 982
NmeAIII GCCGAG 1 cut(s) 1281
NsiI ATGCAT 2 cut(s) 1046, 1333
NspI RCATGY 3 cut(s) 440, 685, 1439
OliI CACNNNNGTG 1 cut(s) 339
PaeI GCATGC 1 cut(s) 1439
PaeR7I CTCGAG 1 cut(s) 569
PagI TCATGA 2 cut(s) 322, 1081
PciI ACATGT 1 cut(s) 681
PdmI GAANNNNTTC 3 cut(s) 63, 1073, 1097
PfeI GAWTC 4 cut(s) 122, 1093, 1523, 1641
PfoI TCCNGGA 1 cut(s) 1056
PkrI GCNGC 2 cut(s) 505, 1681
Ple19I CGATCG 1 cut(s) 1187
PleI GAGTC 1 cut(s) 580
PpsI GAGTC 1 cut(s) 580
PscI ACATGT 1 cut(s) 681
PshAI GACNNNNGTC 1 cut(s) 682
PsiI TTATAA 1 cut(s) 1626
Psp124BI GAGCTC 1 cut(s) 1056
PspPI GGNCC 1 cut(s) 142
PspXI VCTCGAGB 1 cut(s) 569
PstI CTGCAG 1 cut(s) 1684
PsuI RGATCY 2 cut(s) 16, 1615
PvuI CGATCG 1 cut(s) 1187
RsaI GTAC 4 cut(s) 39, 603, 911, 988
RsaNI GTAC 4 cut(s) 38, 602, 910, 987
RseI CAYNNNNRTG 6 cut(s) 309, 339, 399, 441, 702, 1336
SacI GAGCTC 1 cut(s) 1056
SaqAI TTAA 3 cut(s) 513, 1554, 1601
SatI GCNGC 2 cut(s) 504, 1680
Sau96I GGNCC 1 cut(s) 142
ScaI AGTACT 1 cut(s) 911
SchI GAGTC 1 cut(s) 581
ScrFI CCNGG 1 cut(s) 1058
SduI GDGCHC 1 cut(s) 1056
SfaNI GCATC 2 cut(s) 232, 1318
SfcI CTRYAG 2 cut(s) 12, 1680
Sfr274I CTCGAG 1 cut(s) 569
SlaI CTCGAG 1 cut(s) 569
SmiMI CAYNNNNRTG 6 cut(s) 309, 339, 399, 441, 702, 1336
SmlI CTYRAG 5 cut(s) 126, 230, 512, 569, 624
SmoI CTYRAG 5 cut(s) 126, 230, 512, 569, 624
SphI GCATGC 1 cut(s) 1439
SsiI CCGC 1 cut(s) 576
SspI AATATT 1 cut(s) 1074
SspMI CTAG 4 cut(s) 536, 656, 807, 824
SstI GAGCTC 1 cut(s) 1056
StyD4I CCNGG 1 cut(s) 1056
StyI CCWWGG 2 cut(s) 256, 630
TaaI ACNGT 4 cut(s) 341, 728, 958, 1707
TaqI TCGA 6 cut(s) 162, 240, 471, 570, 1183, 1692
TatI WGTACW 2 cut(s) 601, 909
TfiI GAWTC 4 cut(s) 122, 1093, 1523, 1641
Tru1I TTAA 3 cut(s) 513, 1554, 1601
Tru9I TTAA 3 cut(s) 513, 1554, 1601
TscAI CASTG 4 cut(s) 303, 733, 1704, 1710
TseI GCWGC 2 cut(s) 503, 1679
TspDTI ATGAA 8 cut(s) 100, 509, 714, 720, 1098, 1184, 1284, 1478
TspRI CASTG 4 cut(s) 303, 733, 1704, 1710
Vha464I CTTAAG 1 cut(s) 512
XagI CCTNNNNNAGG 1 cut(s) 1625
XapI RAATTY 1 cut(s) 79
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 3 cut(s) 440, 685, 1439
XcmI CCANNNNNNNNNTGG 1 cut(s) 914
XhoI CTCGAG 1 cut(s) 569
XmnI GAANNNNTTC 3 cut(s) 63, 1073, 1097
XspI CTAG 4 cut(s) 536, 656, 807, 824
ZrmI AGTACT 1 cut(s) 911
Zsp2I ATGCAT 2 cut(s) 1046, 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.