Zinc finger BED domain-containing protein RICESLEEPER
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g15400 FvH4_1g23531 FvH4_1g28482 FvH4_1g28542 FvH4_2g14281 FvH4_2g14281 FvH4_3g13351 FvH4_3g33583 FvH4_3g33584 FvH4_4g15594 FvH4_4g15661 FvH4_6g37061 FvH4_6g37061 FvH4_6g37061 |
| rosa_chinensis | RchiOBHm_Chr6g0268811 |
| rosa_laevigata | RLG00000009116 RLG00000009803 RLG00000023112 RLG00000029863 |
| rosa_multiflora | Rmu_sc0000840.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00004660 Rroxscaffold_1G00017280 Rroxscaffold_2G00146270 Rroxscaffold_4G00308380 Rroxscaffold_7G00176640 |
| rosa_rugosa | Rorug02G0012000 Rorug03G0320900 Rorug05G0035700 |
| rosa_samantha | Rh2AG080600 Rh2AG204500 Rh2AG272900 Rh2CG207800 Rh2DG079600 Rh2DG210900 Rh3BG262200 Rh3CG359000 Rh4BG049500 Rh4BG144800 Rh4CG020200 Rh5AG158800 Rh5AG237200 Rh5AG393600 Rh5AG424400 Rh5BG158100 Rh5CG259700 Rh5DG158300 Rh6BG111000 Rh7DG303500 |
| rosa_wichuraiana | Rw2G006620 Rw2G006630 Rw2G020590 Rw3G028600 Rw4G009220 Rw5G014170 Rw5G039990 Rw6G018560 Rw7G025780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 169 |
| AclWI | GGATC | 1 cut(s) | 216 |
| AcsI | RAATTY | 1 cut(s) | 88 |
| AfaI | GTAC | 1 cut(s) | 145 |
| AgsI | TTSAA | 1 cut(s) | 218 |
| AjnI | CCWGG | 2 cut(s) | 120, 172 |
| AluBI | AGCT | 1 cut(s) | 248 |
| AluI | AGCT | 1 cut(s) | 248 |
| Alw21I | GWGCWC | 1 cut(s) | 190 |
| AlwI | GGATC | 1 cut(s) | 216 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| ApoI | RAATTY | 1 cut(s) | 88 |
| AsuHPI | GGTGA | 1 cut(s) | 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 190 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BccI | CCATC | 1 cut(s) | 40 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 177, 211 |
| BciT130I | CCWGG | 2 cut(s) | 122, 174 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 2 cut(s) | 122, 174 |
| BmrFI | CCNGG | 2 cut(s) | 122, 174 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BsaJI | CCNNGG | 2 cut(s) | 172, 173 |
| Bse3DI | GCAATG | 1 cut(s) | 96 |
| BseBI | CCWGG | 2 cut(s) | 122, 174 |
| BseDI | CCNNGG | 2 cut(s) | 172, 173 |
| BseMI | GCAATG | 1 cut(s) | 96 |
| BseMII | CTCAG | 1 cut(s) | 105 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| BsgI | GTGCAG | 1 cut(s) | 87 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiHKAI | GWGCWC | 1 cut(s) | 190 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp1286I | GDGCHC | 1 cut(s) | 190 |
| Bsp143I | GATC | 1 cut(s) | 208 |
| BspACI | CCGC | 1 cut(s) | 169 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 106 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BsrDI | GCAATG | 1 cut(s) | 96 |
| BssECI | CCNNGG | 2 cut(s) | 172, 173 |
| BssMI | GATC | 1 cut(s) | 208 |
| Bst2UI | CCWGG | 2 cut(s) | 122, 174 |
| Bst6I | CTCTTC | 1 cut(s) | 13 |
| BstDEI | CTNAG | 1 cut(s) | 114 |
| BstKTI | GATC | 1 cut(s) | 211 |
| BstMBI | GATC | 1 cut(s) | 208 |
| BstNI | CCWGG | 2 cut(s) | 122, 174 |
| BstSCI | CCNGG | 2 cut(s) | 120, 172 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| Csp6I | GTAC | 1 cut(s) | 144 |
| CviAII | CATG | 1 cut(s) | 315 |
| CviJI | RGCY | 2 cut(s) | 5, 248 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 248 |
| CviQI | GTAC | 1 cut(s) | 144 |
| DdeI | CTNAG | 1 cut(s) | 114 |
| DpnI | GATC | 1 cut(s) | 210 |
| DpnII | GATC | 1 cut(s) | 208 |
| Eam1104I | CTCTTC | 1 cut(s) | 13 |
| EarI | CTCTTC | 1 cut(s) | 13 |
| EcoRI | GAATTC | 1 cut(s) | 88 |
| EcoRII | CCWGG | 2 cut(s) | 120, 172 |
| FaeI | CATG | 1 cut(s) | 318 |
| FaiI | YATR | 3 cut(s) | 182, 205, 316 |
| FatI | CATG | 1 cut(s) | 314 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| GluI | GCNGC | 1 cut(s) | 102 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 318 |
| HincII | GTYRAC | 1 cut(s) | 156 |
| HindII | GTYRAC | 1 cut(s) | 156 |
| HinfI | GANTC | 1 cut(s) | 52 |
| HphI | GGTGA | 1 cut(s) | 44 |
| Hpy166II | GTNNAC | 2 cut(s) | 156, 166 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| Hpy8I | GTNNAC | 2 cut(s) | 156, 166 |
| HpyCH4V | TGCA | 2 cut(s) | 104, 255 |
| HpyF3I | CTNAG | 1 cut(s) | 114 |
| Hsp92II | CATG | 1 cut(s) | 318 |
| Kzo9I | GATC | 1 cut(s) | 208 |
| LpnPI | CCDG | 7 cut(s) | 24, 107, 126, 134, 159, 186, 209 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeIII | GTNAC | 1 cut(s) | 295 |
| MalI | GATC | 1 cut(s) | 210 |
| MboI | GATC | 1 cut(s) | 208 |
| MfeI | CAATTG | 1 cut(s) | 272 |
| MhlI | GDGCHC | 1 cut(s) | 190 |
| MluCI | AATT | 4 cut(s) | 66, 88, 228, 272 |
| MnlI | CCTC | 2 cut(s) | 16, 72 |
| MslI | CAYNNNNRTG | 1 cut(s) | 313 |
| MspR9I | CCNGG | 2 cut(s) | 122, 174 |
| MunI | CAATTG | 1 cut(s) | 272 |
| MvaI | CCWGG | 2 cut(s) | 122, 174 |
| NdeII | GATC | 1 cut(s) | 208 |
| NlaIII | CATG | 1 cut(s) | 318 |
| PasI | CCCWGGG | 1 cut(s) | 173 |
| PfeI | GAWTC | 1 cut(s) | 52 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| Psp6I | CCWGG | 2 cut(s) | 120, 172 |
| PspGI | CCWGG | 2 cut(s) | 120, 172 |
| RsaI | GTAC | 1 cut(s) | 145 |
| RsaNI | GTAC | 1 cut(s) | 144 |
| RseI | CAYNNNNRTG | 1 cut(s) | 313 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau3AI | GATC | 1 cut(s) | 208 |
| ScrFI | CCNGG | 2 cut(s) | 122, 174 |
| SduI | GDGCHC | 1 cut(s) | 190 |
| SetI | ASST | 3 cut(s) | 145, 228, 250 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SgeI | CNNG | 7 cut(s) | 51, 133, 134, 153, 185, 186, 236 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 313 |
| Sse9I | AATT | 4 cut(s) | 66, 88, 228, 272 |
| SsiI | CCGC | 1 cut(s) | 169 |
| StyD4I | CCNGG | 2 cut(s) | 120, 172 |
| TaqI | TCGA | 1 cut(s) | 92 |
| TasI | AATT | 4 cut(s) | 66, 88, 228, 272 |
| TfiI | GAWTC | 1 cut(s) | 52 |
| TseI | GCWGC | 1 cut(s) | 101 |
| XapI | RAATTY | 1 cut(s) | 88 |