Domain of unknown function (DUF4413)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g15400 FvH4_1g23531 FvH4_1g28482 FvH4_1g28542 FvH4_2g14281 FvH4_2g14281 FvH4_3g13351 FvH4_3g33583 FvH4_3g33584 FvH4_4g15594 FvH4_4g15661 FvH4_6g37061 FvH4_6g37061 FvH4_6g37061 |
| rosa_chinensis | RchiOBHm_Chr6g0268811 |
| rosa_laevigata | RLG00000009116 RLG00000009803 RLG00000023112 RLG00000029863 |
| rosa_multiflora | Rmu_sc0000840.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00004660 Rroxscaffold_1G00017280 Rroxscaffold_2G00146270 Rroxscaffold_4G00308380 Rroxscaffold_7G00176640 |
| rosa_rugosa | Rorug02G0012000 Rorug03G0320900 Rorug05G0035700 |
| rosa_samantha | Rh2AG080600 Rh2AG204500 Rh2AG272900 Rh2CG207800 Rh2DG079600 Rh2DG210900 Rh3BG262200 Rh3CG359000 Rh4BG049500 Rh4BG144800 Rh4CG020200 Rh5AG158800 Rh5AG237200 Rh5AG393600 Rh5AG424400 Rh5BG158100 Rh5CG259700 Rh5DG158300 Rh6BG111000 Rh7DG303500 |
| rosa_wichuraiana | Rw2G006620 Rw2G006630 Rw2G020590 Rw3G028600 Rw4G009220 Rw5G014170 Rw5G039990 Rw6G018560 Rw7G025780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 179 |
| AclWI | GGATC | 1 cut(s) | 157 |
| AcsI | RAATTY | 1 cut(s) | 202 |
| AfaI | GTAC | 1 cut(s) | 332 |
| AflIII | ACRYGT | 1 cut(s) | 208 |
| AgsI | TTSAA | 2 cut(s) | 110, 202 |
| AluBI | AGCT | 2 cut(s) | 21, 304 |
| AluI | AGCT | 2 cut(s) | 21, 304 |
| AlwI | GGATC | 1 cut(s) | 157 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| ApoI | RAATTY | 1 cut(s) | 202 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 193 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BclI | TGATCA | 1 cut(s) | 120 |
| BisI | GCNGC | 1 cut(s) | 90 |
| BlsI | GCNGC | 1 cut(s) | 91 |
| BmsI | GCATC | 1 cut(s) | 333 |
| Bse3DI | GCAATG | 1 cut(s) | 151 |
| BseGI | GGATG | 2 cut(s) | 55, 331 |
| BseMI | GCAATG | 1 cut(s) | 151 |
| BseMII | CTCAG | 1 cut(s) | 291 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BslFI | GGGAC | 1 cut(s) | 271 |
| BsmFI | GGGAC | 1 cut(s) | 271 |
| Bsp143I | GATC | 3 cut(s) | 120, 162, 315 |
| BspCNI | CTCAG | 1 cut(s) | 292 |
| BspPI | GGATC | 1 cut(s) | 157 |
| BsrDI | GCAATG | 1 cut(s) | 151 |
| BssMI | GATC | 3 cut(s) | 120, 162, 315 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 306 |
| BstDEI | CTNAG | 4 cut(s) | 167, 300, 353, 386 |
| BstF5I | GGATG | 2 cut(s) | 55, 331 |
| BstKTI | GATC | 3 cut(s) | 123, 165, 318 |
| BstMBI | GATC | 3 cut(s) | 120, 162, 315 |
| BstNSI | RCATGY | 1 cut(s) | 212 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BstX2I | RGATCY | 1 cut(s) | 162 |
| BstYI | RGATCY | 1 cut(s) | 162 |
| BtsCI | GGATG | 2 cut(s) | 55, 331 |
| Cac8I | GCNNGC | 1 cut(s) | 306 |
| Csp6I | GTAC | 1 cut(s) | 331 |
| CviAII | CATG | 1 cut(s) | 209 |
| CviJI | RGCY | 3 cut(s) | 21, 235, 304 |
| CviKI_1 | RGCY | 3 cut(s) | 21, 235, 304 |
| CviQI | GTAC | 1 cut(s) | 331 |
| DdeI | CTNAG | 4 cut(s) | 167, 300, 353, 386 |
| DpnI | GATC | 3 cut(s) | 122, 164, 317 |
| DpnII | GATC | 3 cut(s) | 120, 162, 315 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| FaeI | CATG | 1 cut(s) | 212 |
| FaiI | YATR | 7 cut(s) | 11, 16, 18, 38, 97, 210, 369 |
| FaqI | GGGAC | 1 cut(s) | 271 |
| FatI | CATG | 1 cut(s) | 208 |
| FbaI | TGATCA | 1 cut(s) | 120 |
| FblI | GTMKAC | 1 cut(s) | 179 |
| Fnu4HI | GCNGC | 1 cut(s) | 90 |
| FokI | GGATG | 2 cut(s) | 62, 338 |
| Fsp4HI | GCNGC | 1 cut(s) | 90 |
| GluI | GCNGC | 1 cut(s) | 90 |
| Hin1II | CATG | 1 cut(s) | 212 |
| Hpy166II | GTNNAC | 2 cut(s) | 180, 359 |
| Hpy188I | TCNGA | 1 cut(s) | 266 |
| Hpy8I | GTNNAC | 2 cut(s) | 180, 359 |
| Hpy99I | CGWCG | 1 cut(s) | 161 |
| HpyCH4V | TGCA | 3 cut(s) | 173, 293, 346 |
| HpyF3I | CTNAG | 4 cut(s) | 167, 300, 353, 386 |
| Hsp92II | CATG | 1 cut(s) | 212 |
| Ksp22I | TGATCA | 1 cut(s) | 120 |
| Kzo9I | GATC | 3 cut(s) | 120, 162, 315 |
| LmnI | GCTCC | 1 cut(s) | 249 |
| LpnPI | CCDG | 1 cut(s) | 204 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| LweI | GCATC | 1 cut(s) | 333 |
| MalI | GATC | 3 cut(s) | 122, 164, 317 |
| MboI | GATC | 3 cut(s) | 120, 162, 315 |
| MboII | GAAGA | 2 cut(s) | 17, 143 |
| MfeI | CAATTG | 1 cut(s) | 335 |
| MflI | RGATCY | 1 cut(s) | 162 |
| MluCI | AATT | 4 cut(s) | 141, 193, 202, 335 |
| MnlI | CCTC | 3 cut(s) | 75, 246, 247 |
| MroXI | GAANNNNTTC | 1 cut(s) | 193 |
| MseI | TTAA | 1 cut(s) | 213 |
| MslI | CAYNNNNRTG | 1 cut(s) | 279 |
| MunI | CAATTG | 1 cut(s) | 335 |
| NdeII | GATC | 3 cut(s) | 120, 162, 315 |
| NlaIII | CATG | 1 cut(s) | 212 |
| NspI | RCATGY | 1 cut(s) | 212 |
| PciI | ACATGT | 1 cut(s) | 208 |
| PdmI | GAANNNNTTC | 1 cut(s) | 193 |
| PkrI | GCNGC | 1 cut(s) | 91 |
| PscI | ACATGT | 1 cut(s) | 208 |
| PsuI | RGATCY | 1 cut(s) | 162 |
| RsaI | GTAC | 1 cut(s) | 332 |
| RsaNI | GTAC | 1 cut(s) | 331 |
| RseI | CAYNNNNRTG | 1 cut(s) | 279 |
| SaqAI | TTAA | 1 cut(s) | 213 |
| SatI | GCNGC | 1 cut(s) | 90 |
| Sau3AI | GATC | 3 cut(s) | 120, 162, 315 |
| SetI | ASST | 4 cut(s) | 23, 223, 274, 306 |
| SfaNI | GCATC | 1 cut(s) | 333 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 279 |
| Sse9I | AATT | 4 cut(s) | 141, 193, 202, 335 |
| TasI | AATT | 4 cut(s) | 141, 193, 202, 335 |
| Tru1I | TTAA | 1 cut(s) | 213 |
| Tru9I | TTAA | 1 cut(s) | 213 |
| TseI | GCWGC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 2 cut(s) | 362, 368 |
| XapI | RAATTY | 1 cut(s) | 202 |
| XceI | RCATGY | 1 cut(s) | 212 |
| XmiI | GTMKAC | 1 cut(s) | 179 |
| XmnI | GAANNNNTTC | 1 cut(s) | 193 |