Zinc finger BED domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g15400 FvH4_1g23531 FvH4_1g28482 FvH4_1g28542 FvH4_2g14281 FvH4_2g14281 FvH4_3g13351 FvH4_3g33583 FvH4_3g33584 FvH4_4g15594 FvH4_4g15661 FvH4_6g37061 FvH4_6g37061 FvH4_6g37061 |
| rosa_chinensis | RchiOBHm_Chr6g0268811 |
| rosa_laevigata | RLG00000009116 RLG00000009803 RLG00000023112 RLG00000029863 |
| rosa_multiflora | Rmu_sc0000840.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00004660 Rroxscaffold_1G00017280 Rroxscaffold_2G00146270 Rroxscaffold_4G00308380 Rroxscaffold_7G00176640 |
| rosa_rugosa | Rorug02G0012000 Rorug03G0320900 Rorug05G0035700 |
| rosa_samantha | Rh2AG080600 Rh2AG204500 Rh2AG272900 Rh2CG207800 Rh2DG079600 Rh2DG210900 Rh3BG262200 Rh3CG359000 Rh4BG049500 Rh4BG144800 Rh4CG020200 Rh5AG158800 Rh5AG237200 Rh5AG393600 Rh5AG424400 Rh5BG158100 Rh5CG259700 Rh5DG158300 Rh6BG111000 Rh7DG303500 |
| rosa_wichuraiana | Rw2G006620 Rw2G006630 Rw2G020590 Rw3G028600 Rw4G009220 Rw5G014170 Rw5G039990 Rw6G018560 Rw7G025780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 371 |
| Acc16I | TGCGCA | 1 cut(s) | 392 |
| AcsI | RAATTY | 1 cut(s) | 335 |
| AfaI | GTAC | 1 cut(s) | 500 |
| AgsI | TTSAA | 3 cut(s) | 65, 101, 271 |
| AluBI | AGCT | 2 cut(s) | 140, 209 |
| AluI | AGCT | 2 cut(s) | 140, 209 |
| Alw26I | GTCTC | 1 cut(s) | 121 |
| Ama87I | CYCGRG | 1 cut(s) | 263 |
| ApoI | RAATTY | 1 cut(s) | 335 |
| AspLEI | GCGC | 1 cut(s) | 393 |
| AsuHPI | GGTGA | 1 cut(s) | 116 |
| AvaI | CYCGRG | 1 cut(s) | 263 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 365, 398 |
| BccI | CCATC | 2 cut(s) | 164, 401 |
| BciVI | GTATCC | 1 cut(s) | 393 |
| BcoDI | GTCTC | 1 cut(s) | 121 |
| BfaI | CTAG | 1 cut(s) | 45 |
| BfuI | GTATCC | 1 cut(s) | 393 |
| BglII | AGATCT | 1 cut(s) | 489 |
| BmeT110I | CYCGRG | 1 cut(s) | 263 |
| BmsI | GCATC | 2 cut(s) | 97, 311 |
| BseRI | GAGGAG | 1 cut(s) | 139 |
| BsiHKCI | CYCGRG | 1 cut(s) | 263 |
| BslFI | GGGAC | 1 cut(s) | 241 |
| BsmAI | GTCTC | 1 cut(s) | 121 |
| BsmFI | GGGAC | 1 cut(s) | 241 |
| BsoBI | CYCGRG | 1 cut(s) | 263 |
| Bsp143I | GATC | 2 cut(s) | 468, 489 |
| BssMI | GATC | 2 cut(s) | 468, 489 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstC8I | GCNNGC | 1 cut(s) | 357 |
| BstHHI | GCGC | 1 cut(s) | 393 |
| BstKTI | GATC | 2 cut(s) | 471, 492 |
| BstMAI | GTCTC | 1 cut(s) | 121 |
| BstMBI | GATC | 2 cut(s) | 468, 489 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 50 |
| BstX2I | RGATCY | 1 cut(s) | 489 |
| BstYI | RGATCY | 1 cut(s) | 489 |
| BsuI | GTATCC | 1 cut(s) | 393 |
| Cac8I | GCNNGC | 1 cut(s) | 357 |
| CfoI | GCGC | 1 cut(s) | 393 |
| Csp6I | GTAC | 1 cut(s) | 499 |
| CviAII | CATG | 8 cut(s) | 233, 242, 258, 293, 364, 377, 394, 404 |
| CviJI | RGCY | 3 cut(s) | 44, 140, 209 |
| CviKI_1 | RGCY | 3 cut(s) | 44, 140, 209 |
| CviQI | GTAC | 1 cut(s) | 499 |
| DpnI | GATC | 2 cut(s) | 470, 491 |
| DpnII | GATC | 2 cut(s) | 468, 489 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| Eco32I | GATATC | 1 cut(s) | 481 |
| Eco88I | CYCGRG | 1 cut(s) | 263 |
| EcoRV | GATATC | 1 cut(s) | 481 |
| FaeI | CATG | 8 cut(s) | 236, 245, 261, 296, 367, 380, 397, 407 |
| FaqI | GGGAC | 1 cut(s) | 241 |
| FatI | CATG | 8 cut(s) | 232, 241, 257, 292, 363, 376, 393, 403 |
| FspBI | CTAG | 1 cut(s) | 45 |
| FspI | TGCGCA | 1 cut(s) | 392 |
| GlaI | GCGC | 1 cut(s) | 392 |
| HhaI | GCGC | 1 cut(s) | 393 |
| Hin1II | CATG | 8 cut(s) | 236, 245, 261, 296, 367, 380, 397, 407 |
| Hin6I | GCGC | 1 cut(s) | 391 |
| HinP1I | GCGC | 1 cut(s) | 391 |
| HincII | GTYRAC | 1 cut(s) | 93 |
| HindII | GTYRAC | 1 cut(s) | 93 |
| HinfI | GANTC | 5 cut(s) | 89, 148, 341, 411, 462 |
| HphI | GGTGA | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 2 cut(s) | 93, 239 |
| Hpy188III | TCNNGA | 4 cut(s) | 345, 459, 466, 472 |
| Hpy8I | GTNNAC | 2 cut(s) | 93, 239 |
| HpyCH4V | TGCA | 4 cut(s) | 110, 186, 302, 359 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 50 |
| Hsp92II | CATG | 8 cut(s) | 236, 245, 261, 296, 367, 380, 397, 407 |
| HspAI | GCGC | 1 cut(s) | 391 |
| Kzo9I | GATC | 2 cut(s) | 468, 489 |
| LmnI | GCTCC | 2 cut(s) | 50, 216 |
| LpnPI | CCDG | 2 cut(s) | 195, 400 |
| LweI | GCATC | 2 cut(s) | 97, 311 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 1 cut(s) | 425 |
| MalI | GATC | 2 cut(s) | 470, 491 |
| MboI | GATC | 2 cut(s) | 468, 489 |
| MboII | GAAGA | 1 cut(s) | 133 |
| MfeI | CAATTG | 1 cut(s) | 60 |
| MflI | RGATCY | 1 cut(s) | 489 |
| MluCI | AATT | 3 cut(s) | 60, 335, 350 |
| MlyI | GAGTC | 2 cut(s) | 98, 350 |
| MmeI | TCCRAC | 1 cut(s) | 295 |
| MnlI | CCTC | 4 cut(s) | 34, 117, 311, 504 |
| MunI | CAATTG | 1 cut(s) | 60 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 50 |
| NdeII | GATC | 2 cut(s) | 468, 489 |
| NlaIII | CATG | 8 cut(s) | 236, 245, 261, 296, 367, 380, 397, 407 |
| NsbI | TGCGCA | 1 cut(s) | 392 |
| PfeI | GAWTC | 3 cut(s) | 148, 411, 462 |
| PleI | GAGTC | 2 cut(s) | 97, 349 |
| PpsI | GAGTC | 2 cut(s) | 97, 349 |
| PsiI | TTATAA | 1 cut(s) | 371 |
| PsuI | RGATCY | 1 cut(s) | 489 |
| RsaI | GTAC | 1 cut(s) | 500 |
| RsaNI | GTAC | 1 cut(s) | 499 |
| Sau3AI | GATC | 2 cut(s) | 468, 489 |
| SchI | GAGTC | 2 cut(s) | 98, 350 |
| SetI | ASST | 5 cut(s) | 14, 106, 142, 211, 315 |
| SfaNI | GCATC | 2 cut(s) | 97, 311 |
| Sse9I | AATT | 3 cut(s) | 60, 335, 350 |
| SspMI | CTAG | 1 cut(s) | 45 |
| TaqI | TCGA | 2 cut(s) | 330, 460 |
| TasI | AATT | 3 cut(s) | 60, 335, 350 |
| TfiI | GAWTC | 3 cut(s) | 148, 411, 462 |
| TspDTI | ATGAA | 2 cut(s) | 90, 348 |
| XapI | RAATTY | 1 cut(s) | 335 |
| XspI | CTAG | 1 cut(s) | 45 |