Translin family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g15400 FvH4_1g23531 FvH4_1g28482 FvH4_1g28542 FvH4_2g14281 FvH4_2g14281 FvH4_3g13351 FvH4_3g33583 FvH4_3g33584 FvH4_4g15594 FvH4_4g15661 FvH4_6g37061 FvH4_6g37061 FvH4_6g37061 |
| rosa_chinensis | RchiOBHm_Chr6g0268811 |
| rosa_laevigata | RLG00000009116 RLG00000009803 RLG00000023112 RLG00000029863 |
| rosa_multiflora | Rmu_sc0000840.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00004660 Rroxscaffold_1G00017280 Rroxscaffold_2G00146270 Rroxscaffold_4G00308380 Rroxscaffold_7G00176640 |
| rosa_rugosa | Rorug02G0012000 Rorug03G0320900 Rorug05G0035700 |
| rosa_samantha | Rh2AG080600 Rh2AG204500 Rh2AG272900 Rh2CG207800 Rh2DG079600 Rh2DG210900 Rh3BG262200 Rh3CG359000 Rh4BG049500 Rh4BG144800 Rh4CG020200 Rh5AG158800 Rh5AG237200 Rh5AG393600 Rh5AG424400 Rh5BG158100 Rh5CG259700 Rh5DG158300 Rh6BG111000 Rh7DG303500 |
| rosa_wichuraiana | Rw2G006620 Rw2G006630 Rw2G020590 Rw3G028600 Rw4G009220 Rw5G014170 Rw5G039990 Rw6G018560 Rw7G025780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 125, 161 |
| AluBI | AGCT | 1 cut(s) | 7 |
| AluI | AGCT | 1 cut(s) | 7 |
| ApeKI | GCWGC | 1 cut(s) | 52 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 31, 63 |
| AsuHPI | GGTGA | 1 cut(s) | 29 |
| BbvI | GCAGC | 1 cut(s) | 39 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BisI | GCNGC | 1 cut(s) | 53 |
| BlsI | GCNGC | 1 cut(s) | 54 |
| BmsI | GCATC | 2 cut(s) | 24, 157 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseXI | GCAGC | 1 cut(s) | 39 |
| BspCNI | CTCAG | 1 cut(s) | 22 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstC8I | GCNNGC | 1 cut(s) | 57 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 110 |
| BstV1I | GCAGC | 1 cut(s) | 39 |
| Cac8I | GCNNGC | 1 cut(s) | 57 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 2 cut(s) | 7, 104 |
| CviKI_1 | RGCY | 2 cut(s) | 7, 104 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| EcoT22I | ATGCAT | 1 cut(s) | 69 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 6 cut(s) | 10, 15, 65, 77, 83, 94 |
| FatI | CATG | 1 cut(s) | 13 |
| Fnu4HI | GCNGC | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 53 |
| FspBI | CTAG | 1 cut(s) | 105 |
| FspEI | CC | 8 cut(s) | 7, 29, 55, 68, 86, 93, 132, 147 |
| GluI | GCNGC | 1 cut(s) | 53 |
| Hin1II | CATG | 1 cut(s) | 17 |
| HincII | GTYRAC | 1 cut(s) | 153 |
| HindII | GTYRAC | 1 cut(s) | 153 |
| HinfI | GANTC | 1 cut(s) | 149 |
| HphI | GGTGA | 1 cut(s) | 29 |
| Hpy166II | GTNNAC | 1 cut(s) | 153 |
| Hpy188I | TCNGA | 1 cut(s) | 31 |
| Hpy8I | GTNNAC | 1 cut(s) | 153 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 3 cut(s) | 37, 67, 170 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 110 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| LmnI | GCTCC | 2 cut(s) | 4, 110 |
| Lsp1109I | GCAGC | 1 cut(s) | 39 |
| LweI | GCATC | 2 cut(s) | 24, 157 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MfeI | CAATTG | 1 cut(s) | 120 |
| MluCI | AATT | 2 cut(s) | 86, 120 |
| MlyI | GAGTC | 1 cut(s) | 158 |
| MnlI | CCTC | 1 cut(s) | 94 |
| Mph1103I | ATGCAT | 1 cut(s) | 69 |
| MunI | CAATTG | 1 cut(s) | 120 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 110 |
| NlaIII | CATG | 1 cut(s) | 17 |
| NsiI | ATGCAT | 1 cut(s) | 69 |
| PkrI | GCNGC | 1 cut(s) | 54 |
| PleI | GAGTC | 1 cut(s) | 157 |
| PpsI | GAGTC | 1 cut(s) | 157 |
| SatI | GCNGC | 1 cut(s) | 53 |
| SchI | GAGTC | 1 cut(s) | 158 |
| SetI | ASST | 2 cut(s) | 9, 166 |
| SfaNI | GCATC | 2 cut(s) | 24, 157 |
| SgeI | CNNG | 3 cut(s) | 26, 68, 117 |
| Sse9I | AATT | 2 cut(s) | 86, 120 |
| SspMI | CTAG | 1 cut(s) | 105 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TasI | AATT | 2 cut(s) | 86, 120 |
| TseI | GCWGC | 1 cut(s) | 52 |
| TspDTI | ATGAA | 1 cut(s) | 150 |
| XspI | CTAG | 1 cut(s) | 105 |
| Zsp2I | ATGCAT | 1 cut(s) | 69 |