Rh4CG261700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
51689712 .. 51692697
2986 bp
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UTR
Exon/CDS
Intron
Rh4CG261700.1

Sequence Viewer

Length: 213 bp
ATGGGTTGGATTGCGCTTTCGAATTGCGTGCACTTTGCTTTCAAGAGGGTGATTCGAATCGTGGCGGATGGGTTAGGCGATGCGGAGAGAGAGAAGGTGCCTATGAGATTGGCTTCGATGGTACTCCCACTATGGATTGGTGGATTCTTAAGCCAGAAGAGGATGGGTGAAGGTAAGTATTCGTTGATGCTTGGGACACGAAATGATAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

7.83

Weight (kDa)

9.85

Isoelectric Point (pI)

24.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 97
AciI CCGC 2 cut(s) 65, 83
AfaI GTAC 1 cut(s) 123
AflII CTTAAG 1 cut(s) 148
AgsI TTSAA 1 cut(s) 43
Alw21I GWGCWC 1 cut(s) 33
Alw44I GTGCAC 1 cut(s) 29
ApaLI GTGCAC 1 cut(s) 29
AspLEI GCGC 1 cut(s) 16
AsuHPI GGTGA 2 cut(s) 61, 179
AsuII TTCGAA 2 cut(s) 20, 55
BaeGI GKGCMC 1 cut(s) 33
BanI GGYRCC 1 cut(s) 97
Bbv12I GWGCWC 1 cut(s) 33
BccI CCATC 3 cut(s) 62, 112, 157
BcgI CGANNNNNNTGC 2 cut(s) 10, 44
BfrI CTTAAG 1 cut(s) 148
BmiI GGNNCC 1 cut(s) 99
BmsI GCATC 2 cut(s) 70, 177
Bpu14I TTCGAA 2 cut(s) 20, 55
BsaBI GATNNNNATC 1 cut(s) 56
Bse8I GATNNNNATC 1 cut(s) 56
BseGI GGATG 2 cut(s) 73, 168
BseJI GATNNNNATC 1 cut(s) 56
BseSI GKGCMC 1 cut(s) 33
BshNI GGYRCC 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 33
BslFI GGGAC 1 cut(s) 208
BsmFI GGGAC 1 cut(s) 208
Bsp119I TTCGAA 2 cut(s) 20, 55
Bsp1286I GDGCHC 1 cut(s) 33
BspACI CCGC 2 cut(s) 65, 83
BspLI GGNNCC 1 cut(s) 99
BspT104I TTCGAA 2 cut(s) 20, 55
BspT107I GGYRCC 1 cut(s) 97
BspTI CTTAAG 1 cut(s) 148
Bst6I CTCTTC 1 cut(s) 152
BstAFI CTTAAG 1 cut(s) 148
BstBI TTCGAA 2 cut(s) 20, 55
BstC8I GCNNGC 1 cut(s) 29
BstF5I GGATG 2 cut(s) 73, 168
BstHHI GCGC 1 cut(s) 16
BstSLI GKGCMC 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 93
BtsCI GGATG 2 cut(s) 73, 168
Cac8I GCNNGC 1 cut(s) 29
CfoI GCGC 1 cut(s) 16
Csp6I GTAC 1 cut(s) 122
CviJI RGCY 2 cut(s) 113, 153
CviKI_1 RGCY 2 cut(s) 113, 153
CviQI GTAC 1 cut(s) 122
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
EciI GGCGGA 1 cut(s) 80
FaiI YATR 2 cut(s) 104, 133
FaqI GGGAC 1 cut(s) 208
FokI GGATG 2 cut(s) 80, 175
GlaI GCGC 1 cut(s) 15
HhaI GCGC 1 cut(s) 16
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HinfI GANTC 3 cut(s) 52, 57, 144
HphI GGTGA 2 cut(s) 61, 179
Hpy166II GTNNAC 1 cut(s) 31
Hpy188III TCNNGA 1 cut(s) 43
Hpy8I GTNNAC 1 cut(s) 31
HpyAV CCTTC 2 cut(s) 88, 164
HpyCH4V TGCA 1 cut(s) 31
HspAI GCGC 1 cut(s) 14
LpnPI CCDG 1 cut(s) 167
LweI GCATC 2 cut(s) 70, 177
MboII GAAGA 1 cut(s) 169
MhlI GDGCHC 1 cut(s) 33
MluCI AATT 1 cut(s) 22
MnlI CCTC 2 cut(s) 39, 153
MseI TTAA 2 cut(s) 149, 211
MspCI CTTAAG 1 cut(s) 148
NlaIV GGNNCC 1 cut(s) 99
NspV TTCGAA 2 cut(s) 20, 55
PfeI GAWTC 3 cut(s) 52, 57, 144
PspN4I GGNNCC 1 cut(s) 99
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
SaqAI TTAA 2 cut(s) 149, 211
SduI GDGCHC 1 cut(s) 33
SetI ASST 2 cut(s) 99, 175
SfaNI GCATC 2 cut(s) 70, 177
SfuI TTCGAA 2 cut(s) 20, 55
SgeI CNNG 5 cut(s) 40, 55, 73, 166, 203
SmlI CTYRAG 1 cut(s) 148
SmoI CTYRAG 1 cut(s) 148
Sse9I AATT 1 cut(s) 22
SsiI CCGC 2 cut(s) 65, 83
TaqI TCGA 3 cut(s) 20, 55, 116
TasI AATT 1 cut(s) 22
TfiI GAWTC 3 cut(s) 52, 57, 144
Tru1I TTAA 2 cut(s) 149, 211
Tru9I TTAA 2 cut(s) 149, 211
Vha464I CTTAAG 1 cut(s) 148
VneI GTGCAC 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.