Rh5BG443800

pyrophosphate-energized membrane proton pump

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
71230644 .. 71231726
1083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG443800.1

Sequence Viewer

Length: 336 bp
ATGTTTTGCATTCCTTTTAGTAATGCCTTTTCTAACATGTTGCTGCAGGAATATAAGGAGAAGCCAGATTATGCATGTTGTGTTGCTATTGTAGCATCTGCATCTTTGAGGGAGATGATAAAACCTGGTGCCTTGGCTATTATTTCACCTATAGCAGTTGGTATTGCGTTCCGGATATTTGGATACTATCTGGAGGCAAAGGAAGTGATTGTCATAAGGCTGCAATTACAGGAGACATGTAATTCCTGCTATCCTCCTTTTTCTGTTAATTTGGAGATGTCTAGTGGTACTGTGGCAGTAGATTTGACCAAGTTCTTATTGTTTTCGTCATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.27

Weight (kDa)

5.29

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 14 - 58 5.2e-10 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 128
AccIII TCCGGA 1 cut(s) 171
AfaI GTAC 1 cut(s) 289
AflIII ACRYGT 2 cut(s) 36, 236
AjnI CCWGG 1 cut(s) 124
Alw26I GTCTC 1 cut(s) 227
Aor13HI TCCGGA 1 cut(s) 171
ApeKI GCWGC 2 cut(s) 43, 220
AsuHPI GGTGA 1 cut(s) 138
BanI GGYRCC 1 cut(s) 128
BbvI GCAGC 2 cut(s) 30, 207
BciT130I CCWGG 1 cut(s) 126
BciVI GTATCC 1 cut(s) 176
BcoDI GTCTC 1 cut(s) 227
BfaI CTAG 1 cut(s) 282
BfmI CTRYAG 2 cut(s) 44, 150
BfuI GTATCC 1 cut(s) 176
BisI GCNGC 2 cut(s) 44, 221
BlsI GCNGC 2 cut(s) 45, 222
Bme1390I CCNGG 1 cut(s) 126
BmiI GGNNCC 1 cut(s) 130
BmrFI CCNGG 1 cut(s) 126
BmsI GCATC 2 cut(s) 104, 110
BpmI CTGGAG 1 cut(s) 212
BsaJI CCNNGG 1 cut(s) 132
BsaWI WCCGGW 1 cut(s) 171
BseAI TCCGGA 1 cut(s) 171
BseBI CCWGG 1 cut(s) 126
BseDI CCNNGG 1 cut(s) 132
BseXI GCAGC 2 cut(s) 30, 207
BshNI GGYRCC 1 cut(s) 128
BsiSI CCGG 1 cut(s) 172
BsmAI GTCTC 1 cut(s) 227
BsmI GAATGC 1 cut(s) 9
Bsp13I TCCGGA 1 cut(s) 171
BspEI TCCGGA 1 cut(s) 171
BspLI GGNNCC 1 cut(s) 130
BspMAI CTGCAG 1 cut(s) 48
BspT107I GGYRCC 1 cut(s) 128
BssECI CCNNGG 1 cut(s) 132
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 1 cut(s) 126
Bst4CI ACNGT 1 cut(s) 292
BstMAI GTCTC 1 cut(s) 227
BstMWI GCNNNNNNNGC 1 cut(s) 92
BstNI CCWGG 1 cut(s) 126
BstNSI RCATGY 3 cut(s) 40, 78, 240
BstSCI CCNGG 1 cut(s) 124
BstSFI CTRYAG 2 cut(s) 44, 150
BstV1I GCAGC 2 cut(s) 30, 207
BsuI GTATCC 1 cut(s) 176
CsiI ACCWGGT 1 cut(s) 124
Csp6I GTAC 1 cut(s) 288
CviAII CATG 3 cut(s) 37, 75, 237
CviJI RGCY 3 cut(s) 64, 137, 220
CviKI_1 RGCY 3 cut(s) 64, 137, 220
CviQI GTAC 1 cut(s) 288
Eco130I CCWWGG 1 cut(s) 132
EcoRII CCWGG 1 cut(s) 124
EcoT14I CCWWGG 1 cut(s) 132
EcoT22I ATGCAT 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 3 cut(s) 40, 78, 240
FaiI YATR 8 cut(s) 38, 54, 72, 76, 152, 215, 238, 334
FatI CATG 3 cut(s) 36, 74, 236
Fnu4HI GCNGC 2 cut(s) 44, 221
Fsp4HI GCNGC 2 cut(s) 44, 221
FspBI CTAG 1 cut(s) 282
GluI GCNGC 2 cut(s) 44, 221
GsuI CTGGAG 1 cut(s) 212
HapII CCGG 1 cut(s) 172
Hin1II CATG 3 cut(s) 40, 78, 240
HpaII CCGG 1 cut(s) 172
HphI GGTGA 1 cut(s) 138
Hpy188III TCNNGA 2 cut(s) 172, 191
HpyCH4III ACNGT 1 cut(s) 292
HpyCH4V TGCA 5 cut(s) 9, 46, 74, 101, 223
HpyF10VI GCNNNNNNNGC 1 cut(s) 92
Hsp92II CATG 3 cut(s) 40, 78, 240
Kpn2I TCCGGA 1 cut(s) 171
LpnPI CCDG 8 cut(s) 32, 78, 111, 138, 176, 185, 215, 259
Lsp1109I GCAGC 2 cut(s) 30, 207
LweI GCATC 2 cut(s) 104, 110
MabI ACCWGGT 1 cut(s) 124
MaeI CTAG 1 cut(s) 282
MluCI AATT 3 cut(s) 224, 241, 268
MnlI CCTC 3 cut(s) 102, 187, 264
Mph1103I ATGCAT 1 cut(s) 76
MroI TCCGGA 1 cut(s) 171
MseI TTAA 1 cut(s) 267
MspI CCGG 1 cut(s) 172
MspR9I CCNGG 1 cut(s) 126
Mva1269I GAATGC 1 cut(s) 9
MvaI CCWGG 1 cut(s) 126
MwoI GCNNNNNNNGC 1 cut(s) 92
NlaIII CATG 3 cut(s) 40, 78, 240
NlaIV GGNNCC 1 cut(s) 130
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 3 cut(s) 40, 78, 240
PciI ACATGT 2 cut(s) 36, 236
PctI GAATGC 1 cut(s) 9
PkrI GCNGC 2 cut(s) 45, 222
PscI ACATGT 2 cut(s) 36, 236
Psp6I CCWGG 1 cut(s) 124
PspGI CCWGG 1 cut(s) 124
PspN4I GGNNCC 1 cut(s) 130
PstI CTGCAG 1 cut(s) 48
RsaI GTAC 1 cut(s) 289
RsaNI GTAC 1 cut(s) 288
SaqAI TTAA 1 cut(s) 267
SatI GCNGC 2 cut(s) 44, 221
ScrFI CCNGG 1 cut(s) 126
SetI ASST 2 cut(s) 127, 151
SexAI ACCWGGT 1 cut(s) 124
SfaNI GCATC 2 cut(s) 104, 110
SfcI CTRYAG 2 cut(s) 44, 150
Sse9I AATT 3 cut(s) 224, 241, 268
SspMI CTAG 1 cut(s) 282
StyD4I CCNGG 1 cut(s) 124
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 1 cut(s) 292
TasI AATT 3 cut(s) 224, 241, 268
Tru1I TTAA 1 cut(s) 267
Tru9I TTAA 1 cut(s) 267
TseI GCWGC 2 cut(s) 43, 220
XceI RCATGY 3 cut(s) 40, 78, 240
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.