Rh5CG466000

pyrophosphate-energized membrane proton pump

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
64938031 .. 64938730
700 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG466000.1

Sequence Viewer

Length: 369 bp
ATGGAGGAATATAAGGAGAAGCCAGATTATGCATGTTGTGTTGCTATTGTAGCATCTGCATCTTTGAGGGAGATGATAAAACCTGGTGCCTTGGCTATTATTTCACCTATAGCAGTTGGTATTGCGTTCCGGATATTTGGATACTATCTGGAGGCAAAGGAAGTGATTGTCATAAGGCTGCAATTACAGGAGACATGTAATTCCTGCTATCCTCCTTTTTCTGTTAATTTGGAGATGTCTAGTGGTACTGTGGCAGTAGATTTGACCAAAGTGGGAGACCCATTCAAAGACACAGCTAGACCTTCACTTCATGTCCTTATTAAAATGCTTGCTACAAAAATGTTGGTCATGGCTCCTGTCTTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.4

Weight (kDa)

6.56

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 3 - 44 2.1e-09 Inorganic H+ pyrophosphatase
H_PPase PF03030 90 - 117 9.6e-07 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 86
AccIII TCCGGA 1 cut(s) 129
AfaI GTAC 1 cut(s) 247
AflIII ACRYGT 1 cut(s) 194
AgsI TTSAA 1 cut(s) 286
AjnI CCWGG 1 cut(s) 82
AluBI AGCT 1 cut(s) 296
AluI AGCT 1 cut(s) 296
Alw26I GTCTC 2 cut(s) 185, 270
Aor13HI TCCGGA 1 cut(s) 129
ApeKI GCWGC 1 cut(s) 178
AsuHPI GGTGA 1 cut(s) 96
BanI GGYRCC 1 cut(s) 86
BbvI GCAGC 1 cut(s) 165
BciT130I CCWGG 1 cut(s) 84
BciVI GTATCC 1 cut(s) 134
BcoDI GTCTC 2 cut(s) 185, 270
BfaI CTAG 2 cut(s) 240, 297
BfmI CTRYAG 1 cut(s) 108
BfuI GTATCC 1 cut(s) 134
BisI GCNGC 1 cut(s) 179
BlsI GCNGC 1 cut(s) 180
Bme1390I CCNGG 1 cut(s) 84
BmiI GGNNCC 2 cut(s) 88, 354
BmrFI CCNGG 1 cut(s) 84
BmsI GCATC 2 cut(s) 62, 68
BpmI CTGGAG 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 270
BsaJI CCNNGG 1 cut(s) 90
BsaWI WCCGGW 1 cut(s) 129
BseAI TCCGGA 1 cut(s) 129
BseBI CCWGG 1 cut(s) 84
BseDI CCNNGG 1 cut(s) 90
BseXI GCAGC 1 cut(s) 165
BshNI GGYRCC 1 cut(s) 86
BsiSI CCGG 1 cut(s) 130
BsmAI GTCTC 2 cut(s) 185, 270
Bso31I GGTCTC 1 cut(s) 270
Bsp13I TCCGGA 1 cut(s) 129
BspEI TCCGGA 1 cut(s) 129
BspLI GGNNCC 2 cut(s) 88, 354
BspT107I GGYRCC 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 270
BssECI CCNNGG 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 90
Bst2UI CCWGG 1 cut(s) 84
Bst4CI ACNGT 1 cut(s) 250
BstC8I GCNNGC 1 cut(s) 330
BstMAI GTCTC 2 cut(s) 185, 270
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstNI CCWGG 1 cut(s) 84
BstNSI RCATGY 2 cut(s) 36, 198
BstSCI CCNGG 1 cut(s) 82
BstSFI CTRYAG 1 cut(s) 108
BstV1I GCAGC 1 cut(s) 165
BsuI GTATCC 1 cut(s) 134
Cac8I GCNNGC 1 cut(s) 330
CsiI ACCWGGT 1 cut(s) 82
Csp6I GTAC 1 cut(s) 246
CviAII CATG 4 cut(s) 33, 195, 311, 349
CviJI RGCY 5 cut(s) 22, 95, 178, 296, 353
CviKI_1 RGCY 5 cut(s) 22, 95, 178, 296, 353
CviQI GTAC 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 90
Eco31I GGTCTC 1 cut(s) 270
EcoRII CCWGG 1 cut(s) 82
EcoT14I CCWWGG 1 cut(s) 90
EcoT22I ATGCAT 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 90
FaeI CATG 4 cut(s) 36, 198, 314, 352
FaiI YATR 8 cut(s) 12, 30, 34, 110, 173, 196, 312, 350
FatI CATG 4 cut(s) 32, 194, 310, 348
Fnu4HI GCNGC 1 cut(s) 179
Fsp4HI GCNGC 1 cut(s) 179
FspBI CTAG 2 cut(s) 240, 297
GluI GCNGC 1 cut(s) 179
GsuI CTGGAG 1 cut(s) 170
HapII CCGG 1 cut(s) 130
Hin1II CATG 4 cut(s) 36, 198, 314, 352
HpaII CCGG 1 cut(s) 130
HphI GGTGA 1 cut(s) 96
Hpy188III TCNNGA 2 cut(s) 130, 149
HpyAV CCTTC 1 cut(s) 312
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4V TGCA 3 cut(s) 32, 59, 181
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
Hsp92II CATG 4 cut(s) 36, 198, 314, 352
Kpn2I TCCGGA 1 cut(s) 129
LmnI GCTCC 1 cut(s) 358
LpnPI CCDG 7 cut(s) 36, 69, 96, 134, 143, 173, 217
Lsp1109I GCAGC 1 cut(s) 165
LweI GCATC 2 cut(s) 62, 68
MabI ACCWGGT 1 cut(s) 82
MaeI CTAG 2 cut(s) 240, 297
MluCI AATT 3 cut(s) 182, 199, 226
MnlI CCTC 3 cut(s) 60, 145, 222
Mph1103I ATGCAT 1 cut(s) 34
MroI TCCGGA 1 cut(s) 129
MseI TTAA 2 cut(s) 225, 321
MspI CCGG 1 cut(s) 130
MspR9I CCNGG 1 cut(s) 84
MvaI CCWGG 1 cut(s) 84
MwoI GCNNNNNNNGC 1 cut(s) 50
NlaIII CATG 4 cut(s) 36, 198, 314, 352
NlaIV GGNNCC 2 cut(s) 88, 354
NsiI ATGCAT 1 cut(s) 34
NspI RCATGY 2 cut(s) 36, 198
PciI ACATGT 1 cut(s) 194
PkrI GCNGC 1 cut(s) 180
PscI ACATGT 1 cut(s) 194
Psp6I CCWGG 1 cut(s) 82
PspGI CCWGG 1 cut(s) 82
PspN4I GGNNCC 2 cut(s) 88, 354
RsaI GTAC 1 cut(s) 247
RsaNI GTAC 1 cut(s) 246
SaqAI TTAA 2 cut(s) 225, 321
SatI GCNGC 1 cut(s) 179
ScrFI CCNGG 1 cut(s) 84
SetI ASST 4 cut(s) 85, 109, 298, 304
SexAI ACCWGGT 1 cut(s) 82
SfaNI GCATC 2 cut(s) 62, 68
SfcI CTRYAG 1 cut(s) 108
Sse9I AATT 3 cut(s) 182, 199, 226
SspMI CTAG 2 cut(s) 240, 297
StyD4I CCNGG 1 cut(s) 82
StyI CCWWGG 1 cut(s) 90
TaaI ACNGT 1 cut(s) 250
TasI AATT 3 cut(s) 182, 199, 226
Tru1I TTAA 2 cut(s) 225, 321
Tru9I TTAA 2 cut(s) 225, 321
TseI GCWGC 1 cut(s) 178
TspDTI ATGAA 1 cut(s) 299
XceI RCATGY 2 cut(s) 36, 198
XspI CTAG 2 cut(s) 240, 297
Zsp2I ATGCAT 1 cut(s) 34
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.