Rh7DG284400

pyrophosphate-energized membrane proton pump

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
31157218 .. 31159247
2030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG284400.1

Sequence Viewer

Length: 198 bp
ATGGAGGAATATAAGGAGAAGCTAGATTATGCACGTTGTGTTGCTATTGTAGCATCTGCATCTTTGAGGGAGATGATAAAACCTGGTGCCTTGGCTATTATTTCACCTATAGCAGTTGGTATTGCGTTCCGGATATTTGGATACTATCAGGAGGCAAAGGAAGTGATTGTCATAAGGCTGCAATTACAGGAGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

65

Amino Acids

7.32

Weight (kDa)

6.19

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
H_PPase PF03030 3 - 44 1.3e-09 Inorganic H+ pyrophosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 86
AccIII TCCGGA 1 cut(s) 129
AdeI CACNNNGTG 1 cut(s) 38
AjnI CCWGG 1 cut(s) 82
AluBI AGCT 1 cut(s) 22
AluI AGCT 1 cut(s) 22
Alw26I GTCTC 1 cut(s) 185
Aor13HI TCCGGA 1 cut(s) 129
ApeKI GCWGC 1 cut(s) 178
AsuHPI GGTGA 1 cut(s) 96
BanI GGYRCC 1 cut(s) 86
BbvI GCAGC 1 cut(s) 165
BciT130I CCWGG 1 cut(s) 84
BciVI GTATCC 1 cut(s) 134
BcoDI GTCTC 1 cut(s) 185
BfaI CTAG 1 cut(s) 23
BfmI CTRYAG 1 cut(s) 108
BfuI GTATCC 1 cut(s) 134
BisI GCNGC 1 cut(s) 179
BlsI GCNGC 1 cut(s) 180
Bme1390I CCNGG 1 cut(s) 84
BmiI GGNNCC 1 cut(s) 88
BmrFI CCNGG 1 cut(s) 84
BmsI GCATC 2 cut(s) 62, 68
BsaJI CCNNGG 1 cut(s) 90
BsaWI WCCGGW 1 cut(s) 129
BseAI TCCGGA 1 cut(s) 129
BseBI CCWGG 1 cut(s) 84
BseDI CCNNGG 1 cut(s) 90
BseXI GCAGC 1 cut(s) 165
BshNI GGYRCC 1 cut(s) 86
BsiSI CCGG 1 cut(s) 130
BsmAI GTCTC 1 cut(s) 185
Bsp13I TCCGGA 1 cut(s) 129
BspEI TCCGGA 1 cut(s) 129
BspLI GGNNCC 1 cut(s) 88
BspT107I GGYRCC 1 cut(s) 86
BssECI CCNNGG 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 90
Bst2UI CCWGG 1 cut(s) 84
BstMAI GTCTC 1 cut(s) 185
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstNI CCWGG 1 cut(s) 84
BstSCI CCNGG 1 cut(s) 82
BstSFI CTRYAG 1 cut(s) 108
BstV1I GCAGC 1 cut(s) 165
BsuI GTATCC 1 cut(s) 134
CsiI ACCWGGT 1 cut(s) 82
CviJI RGCY 3 cut(s) 22, 95, 178
CviKI_1 RGCY 3 cut(s) 22, 95, 178
DraIII CACNNNGTG 1 cut(s) 38
Eco130I CCWWGG 1 cut(s) 90
EcoRII CCWGG 1 cut(s) 82
EcoT14I CCWWGG 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 90
FaiI YATR 5 cut(s) 12, 30, 110, 173, 196
Fnu4HI GCNGC 1 cut(s) 179
Fsp4HI GCNGC 1 cut(s) 179
FspBI CTAG 1 cut(s) 23
GluI GCNGC 1 cut(s) 179
HapII CCGG 1 cut(s) 130
HpaII CCGG 1 cut(s) 130
HphI GGTGA 1 cut(s) 96
Hpy188III TCNNGA 2 cut(s) 130, 149
HpyCH4IV ACGT 1 cut(s) 34
HpyCH4V TGCA 3 cut(s) 32, 59, 181
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
HpySE526I ACGT 1 cut(s) 34
Kpn2I TCCGGA 1 cut(s) 129
LpnPI CCDG 5 cut(s) 69, 96, 134, 143, 173
Lsp1109I GCAGC 1 cut(s) 165
LweI GCATC 2 cut(s) 62, 68
MabI ACCWGGT 1 cut(s) 82
MaeI CTAG 1 cut(s) 23
MaeII ACGT 1 cut(s) 34
MluCI AATT 1 cut(s) 182
MnlI CCTC 2 cut(s) 60, 145
MroI TCCGGA 1 cut(s) 129
MspI CCGG 1 cut(s) 130
MspR9I CCNGG 1 cut(s) 84
MvaI CCWGG 1 cut(s) 84
MwoI GCNNNNNNNGC 1 cut(s) 50
NlaIV GGNNCC 1 cut(s) 88
PkrI GCNGC 1 cut(s) 180
Psp6I CCWGG 1 cut(s) 82
PspGI CCWGG 1 cut(s) 82
PspN4I GGNNCC 1 cut(s) 88
SatI GCNGC 1 cut(s) 179
ScrFI CCNGG 1 cut(s) 84
SetI ASST 4 cut(s) 24, 37, 85, 109
SexAI ACCWGGT 1 cut(s) 82
SfaNI GCATC 2 cut(s) 62, 68
SfcI CTRYAG 1 cut(s) 108
SgeI CNNG 7 cut(s) 35, 45, 95, 96, 103, 142, 161
Sse9I AATT 1 cut(s) 182
SspMI CTAG 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 82
StyI CCWWGG 1 cut(s) 90
TaiI ACGT 1 cut(s) 37
TasI AATT 1 cut(s) 182
TseI GCWGC 1 cut(s) 178
XspI CTAG 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.