AT1G66050

an N-terminal PHD domain and two RING domains surrounding an SRA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000644
Physical Location & Seq
Forward (+)
24589343 .. 24592780
3438 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G66050.1

Sequence Viewer

Length: 1872 bp
ATGGCGATTCAAACTCAGCTTCCTTGCGACGGAGACGGTGTATGTATGCGGTGCCAGGTGAATCCTCCGTCAGAAGAGACTCTCACGTGTGGCACCTGTGTCACTCCATGGCACGTGTCGTGTCTCCTTCCTGAATCACTCGCTTCTTCCACTGGAGACTGGGAGTGTCCCGATTGCTCCGGCGTTGTTGTTCCCTCCGCCGCTCCGGGTACCGGAATCTCCGGACCTGAATCTTCCGGTTCAGTTCTCGTTACTGCGATCCGTGCGATTCAGGCTGATGTGACTTTGACCGAAGCTGAGAAAGCCAAAAAGAGGCAGAGACTGATGAGTGGTGGTGGTGACGATGGTGTCGATGATGAAGAAAAGAAGAAGTTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAGAGACCTGTTACGACACCGTGTGGGCACAATTTCTGTTTGAAATGTTTCGAGAAATGGGCAGTAGGTCAAGGGAAGCTAACTTGTATGATATGCCGAAGCAAAATTCCGAGACATGTGGCGAAAAATCCTCGCATCAACTTAGCTCTAGTTTCTGCTATTCGTTTAGCAAATGTTACCAAATGTTCTGGTGAGGCAACTGCGGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGACAAAGCATTTACTACCGAGCGGGCAGTAAAAACTGGGAAAGCTAATGCTGCTAGCGGTAAGTTTTTTGTGACAATACCTCGTGATCATTTTGGTCCCATACCAGCTGCGAATGATGTCACTAGAAACCAAGGTGTTTTGGTTGGAGAATCTTGGGAGGACAGGCAAGAGTGTAGGCAGTGGGGAGTTCATTTCCCGCATGTTGCTGGCATTGCCGGGCAAGCAGCGGTTGGAGCTCAGTCTGTGGCCCTCTCTGGAGGTTATGACGATGATGAGGATCATGGTGAATGGTTTCTCTACACAGGAAGTGGTGGAAGGGATCTCAGTGGAAACAAAAGAGTTAACAAGATACAGTCTTCTGACCAGGCGTTTAAAAACATGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATCCTGTCCGAGTTGTAAGGTCTTGGAAGGAGAAGCGTTCTGCATATGCCCCTGCGGAAGGAGTGAGATACGATGGGGTCTACAGAATTGAAAAGTGCTGGAGTAATGTTGGCGTACAGGGTTTGCATAAGATGTGTCGTTACCTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAGTGATGAGCATGGCGATCGTCCAAGACCTTTGCCTGATGTTCCAGAGCTGGAGAATGCTACTGACCTGTTTGTGAGAAAGGAGAGTCCATCATGGGGTTTCGATGAAGCTGAGGGTCGTTGGAAGTGGATGAAGTCTCCACCTGTTAGCAGAATGGCTTTGGATACTGAGGAGAGGAAGAAGAATAAGAGAGCAAAAAAAGGAAATAATGCTATGAAGGCCAGACTTCTGAAAGAATTCAGTTGCCAAATCTGTCGGAAAGTGCTGAGTCTTCCAGTGACGACACCTTGTGCACACAACTTCTGCAAAGCATGCTTAGAAGCGAAGTTTGCTGGGATAACTCAACTGAGAGACAGAAGCAATGGCGTGCGTAAACTACGTGCAAAGAAAAACATCATGACCTGCCCTTGCTGCACAACCGATCTCTCCGAGTTTCTCCAAAACCCGCAGGTGAACAGAGAGATGATGGAGATAATAGAGAATTTTAAGAAGAGTGAGGAAGAGGCTGAAGTTGCGGAGTCATCAAACATTTCTGAAGAAGAAGGAGAAGAAGAATCCGAACCTCCAACTAAGAAGATTAAGATGGATAAAAACTCTGTTGGTGGTACAAGTCTCTCAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000228 GO:0000785 GO:0000790 GO:0000792 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006464 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008327 GO:0009791 GO:0009889 GO:0009893 GO:0009987 GO:0010216 GO:0010228 GO:0010424 GO:0010428 GO:0010429 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031935 GO:0031937 GO:0031974 GO:0031981 GO:0032259 GO:0032446 GO:0032501 GO:0032502 GO:0032776 GO:0033043 GO:0033044 GO:0034641 GO:0036094 GO:0036211 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051252 GO:0060255 GO:0060968 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0090304 GO:0090308 GO:0090309 GO:0097159 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1902275 GO:1903506 GO:1905269 GO:2000112 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAD_SRA zf-RING_UBOX

Protein Analysis

623

Amino Acids

68.72

Weight (kDa)

8.23

Isoelectric Point (pI)

49.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 128 - 173 3.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 129 - 165 4.2e-07 RING-type zinc-finger
zf-C3HC4 PF00097 129 - 168 5.4e-08 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 129 - 168 9.9e-07 zinc finger of C3HC4-type, RING
zf-RING_2 PF13639 129 - 169 8.6e-07 Ring finger domain
SAD_SRA PF02182 259 - 410 3.2e-46 SAD/SRA domain
zf-RING_UBOX PF13445 498 - 530 2.7e-08 RING-type zinc-finger
zf-C3HC4_2 PF13923 498 - 523 5e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1687
AasI GACNNNNNNGTC 1 cut(s) 347
Acc36I ACCTGC 2 cut(s) 1658, 1687
Acc65I GGTACC 1 cut(s) 209
AccB1I GGYRCC 3 cut(s) 51, 92, 209
AccBSI CCGCTC 2 cut(s) 203, 673
AccI GTMKAC 1 cut(s) 1146
AccIII TCCGGA 1 cut(s) 221
AclWI GGATC 3 cut(s) 253, 936, 978
AcoI YGGCCR 1 cut(s) 612
AcsI RAATTY 3 cut(s) 513, 1484, 1729
AcuI CTGAAG 2 cut(s) 1776, 1803
AcvI CACGTG 2 cut(s) 87, 115
AdeI CACNNNGTG 2 cut(s) 431, 1538
AfaI GTAC 3 cut(s) 211, 1182, 1855
AfiI CCNNNNNNNGG 5 cut(s) 29, 212, 312, 1124, 1343
AflIII ACRYGT 3 cut(s) 86, 114, 523
AgsI TTSAA 4 cut(s) 11, 401, 451, 1157
AjnI CCWGG 2 cut(s) 54, 1014
Alw21I GWGCWC 2 cut(s) 889, 1543
Alw44I GTGCAC 1 cut(s) 1539
AlwI GGATC 3 cut(s) 253, 936, 978
AlwNI CAGNNNCTG 1 cut(s) 322
Aor13HI TCCGGA 1 cut(s) 221
AoxI GGCC 3 cut(s) 612, 897, 1467
ApaLI GTGCAC 1 cut(s) 1539
ApeKI GCWGC 4 cut(s) 701, 758, 875, 1659
ApoI RAATTY 3 cut(s) 513, 1484, 1729
Asp700I GAANNNNTTC 3 cut(s) 455, 942, 1484
Asp718I GGTACC 1 cut(s) 209
AspS9I GGNCC 4 cut(s) 224, 746, 898, 1245
AsuC2I CCSGG 2 cut(s) 207, 868
AsuHPI GGTGA 5 cut(s) 70, 350, 611, 947, 1711
AsuNHI GCTAGC 1 cut(s) 704
AvaII GGWCC 3 cut(s) 224, 746, 1245
BaeGI GKGCMC 2 cut(s) 438, 1543
BanI GGYRCC 3 cut(s) 51, 92, 209
BanII GRGCYC 1 cut(s) 889
BauI CACGAG 1 cut(s) 732
BbrPI CACGTG 2 cut(s) 87, 115
BbsI GAAGAC 2 cut(s) 999, 1511
Bbv12I GWGCWC 2 cut(s) 889, 1543
BbvCI CCTCAGC 1 cut(s) 1359
BbvI GCAGC 4 cut(s) 688, 745, 887, 1646
BccI CCATC 5 cut(s) 338, 1133, 1345, 1708, 1825
BcgI CGANNNNNNTGC 2 cut(s) 1247, 1281
BciT130I CCWGG 2 cut(s) 56, 1016
BciVI GTATCC 1 cut(s) 1405
BclI TGATCA 1 cut(s) 736
BcnI CCSGG 2 cut(s) 207, 868
BfaI CTAG 3 cut(s) 557, 705, 774
BfmI CTRYAG 1 cut(s) 1147
BfuAI ACCTGC 2 cut(s) 1658, 1687
BfuI GTATCC 1 cut(s) 1405
BisI GCNGC 6 cut(s) 201, 612, 702, 759, 876, 1660
BlsI GCNGC 6 cut(s) 202, 613, 703, 760, 877, 1661
Bme1390I CCNGG 4 cut(s) 56, 207, 868, 1016
Bme18I GGWCC 3 cut(s) 224, 746, 1245
BmgT120I GGNCC 4 cut(s) 224, 746, 898, 1245
BmiI GGNNCC 4 cut(s) 53, 94, 211, 748
BmrFI CCNGG 4 cut(s) 56, 207, 868, 1016
BmrI ACTGGG 2 cut(s) 169, 696
BmsI GCATC 1 cut(s) 552
BmtI GCTAGC 1 cut(s) 708
BmuI ACTGGG 2 cut(s) 169, 696
BpiI GAAGAC 2 cut(s) 999, 1511
BpmI CTGGAG 4 cut(s) 174, 927, 1186, 1319
Bpu10I CCTNAGC 1 cut(s) 1359
BpuMI CCSGG 2 cut(s) 207, 868
BsaAI YACGTR 3 cut(s) 87, 115, 1628
BsaBI GATNNNNATC 1 cut(s) 927
BsaI GGTCTC 1 cut(s) 406
BsaJI CCNNGG 4 cut(s) 107, 615, 781, 1241
BsaWI WCCGGW 3 cut(s) 212, 221, 236
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 212, 312, 1124, 1343
Bse1I ACTGG 5 cut(s) 157, 164, 691, 1248, 1523
Bse3DI GCAATG 2 cut(s) 861, 1615
Bse8I GATNNNNATC 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 221
BseBI CCWGG 2 cut(s) 56, 1016
BseDI CCNNGG 4 cut(s) 107, 615, 781, 1241
BseGI GGATG 1 cut(s) 1383
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 5 cut(s) 29, 212, 312, 1124, 1343
BseMI GCAATG 2 cut(s) 861, 1615
BseMII CTCAG 8 cut(s) 29, 288, 902, 988, 1350, 1407, 1505, 1586
BseNI ACTGG 5 cut(s) 157, 164, 691, 1248, 1523
BseRI GAGGAG 1 cut(s) 1433
BseSI GKGCMC 2 cut(s) 438, 1543
BseXI GCAGC 4 cut(s) 688, 745, 887, 1646
BseYI CCCAGC 1 cut(s) 1580
BsgI GTGCAG 1 cut(s) 1645
Bsh1285I CGRYCG 1 cut(s) 1267
BshFI GGCC 3 cut(s) 614, 899, 1469
BshNI GGYRCC 3 cut(s) 51, 92, 209
BsiEI CGRYCG 1 cut(s) 1267
BsiHKAI GWGCWC 2 cut(s) 889, 1543
BsiSI CCGG 6 cut(s) 180, 206, 213, 222, 237, 867
BslFI GGGAC 2 cut(s) 153, 732
BslI CCNNNNNNNGG 5 cut(s) 29, 212, 312, 1124, 1343
BsmBI CGTCTC 1 cut(s) 27
BsmFI GGGAC 2 cut(s) 153, 732
BsmI GAATGC 2 cut(s) 396, 1309
BsnI GGCC 3 cut(s) 614, 899, 1469
Bso31I GGTCTC 1 cut(s) 406
Bsp1286I GDGCHC 3 cut(s) 438, 889, 1543
Bsp13I TCCGGA 1 cut(s) 221
Bsp143I GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
Bsp19I CCATGG 2 cut(s) 107, 1241
BspANI GGCC 3 cut(s) 614, 899, 1469
BspCNI CTCAG 8 cut(s) 28, 289, 901, 987, 1351, 1408, 1506, 1587
BspEI TCCGGA 1 cut(s) 221
BspHI TCATGA 1 cut(s) 1644
BspLI GGNNCC 4 cut(s) 53, 94, 211, 748
BspMI ACCTGC 2 cut(s) 1658, 1687
BspOI GCTAGC 1 cut(s) 708
BspPI GGATC 3 cut(s) 253, 936, 978
BspT107I GGYRCC 3 cut(s) 51, 92, 209
BspTNI GGTCTC 1 cut(s) 406
BsrBI CCGCTC 2 cut(s) 203, 673
BsrDI GCAATG 2 cut(s) 861, 1615
BsrI ACTGG 5 cut(s) 157, 164, 691, 1248, 1523
BssECI CCNNGG 4 cut(s) 107, 615, 781, 1241
BssMI GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
BssSI CACGAG 1 cut(s) 732
BssT1I CCWWGG 4 cut(s) 107, 615, 781, 1241
Bst2BI CACGAG 1 cut(s) 732
Bst2UI CCWGG 2 cut(s) 56, 1016
Bst4CI ACNGT 4 cut(s) 38, 429, 647, 1005
Bst6I CTCTTC 3 cut(s) 69, 1733, 1743
BstAPI GCANNNNNTGC 1 cut(s) 1560
BstBAI YACGTR 3 cut(s) 87, 115, 1628
BstC8I GCNNGC 7 cut(s) 675, 706, 859, 873, 1236, 1561, 1616
BstDSI CCRYGG 2 cut(s) 107, 1241
BstENI CCTNNNNNAGG 1 cut(s) 1122
BstF5I GGATG 1 cut(s) 1383
BstKTI GATC 6 cut(s) 261, 739, 931, 973, 1267, 1672
BstMBI GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
BstMCI CGRYCG 1 cut(s) 1267
BstNI CCWGG 2 cut(s) 56, 1016
BstNSI RCATGY 3 cut(s) 527, 854, 1563
BstSCI CCNGG 4 cut(s) 54, 205, 866, 1014
BstSFI CTRYAG 1 cut(s) 1147
BstSLI GKGCMC 2 cut(s) 438, 1543
BstV1I GCAGC 4 cut(s) 688, 745, 887, 1646
BstV2I GAAGAC 2 cut(s) 999, 1511
BstX2I RGATCY 1 cut(s) 970
BstXI CCANNNNNNTGG 1 cut(s) 1242
BstYI RGATCY 1 cut(s) 970
BsuI GTATCC 1 cut(s) 1405
BsuRI GGCC 3 cut(s) 614, 899, 1469
BtgI CCRYGG 2 cut(s) 107, 1241
BtsCI GGATG 1 cut(s) 1383
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 5 cut(s) 150, 836, 982, 1255, 1530
BveI ACCTGC 2 cut(s) 1658, 1687
Cac8I GCNNGC 7 cut(s) 675, 706, 859, 873, 1236, 1561, 1616
CaiI CAGNNNCTG 1 cut(s) 322
CciI TCATGA 1 cut(s) 1644
Cfr13I GGNCC 4 cut(s) 224, 746, 898, 1245
Csp6I GTAC 3 cut(s) 210, 1181, 1854
CviQI GTAC 3 cut(s) 210, 1181, 1854
DpnI GATC 6 cut(s) 260, 738, 930, 972, 1266, 1671
DpnII GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
DraI TTTAAA 1 cut(s) 1024
DraIII CACNNNGTG 2 cut(s) 431, 1538
DrdI GACNNNNNNGTC 1 cut(s) 347
DseDI GACNNNNNNGTC 1 cut(s) 347
EaeI YGGCCR 1 cut(s) 612
Eam1104I CTCTTC 3 cut(s) 69, 1733, 1743
EarI CTCTTC 3 cut(s) 69, 1733, 1743
EciI GGCGGA 1 cut(s) 187
Ecl136II GAGCTC 1 cut(s) 887
Eco130I CCWWGG 4 cut(s) 107, 615, 781, 1241
Eco24I GRGCYC 1 cut(s) 889
Eco31I GGTCTC 1 cut(s) 406
Eco47I GGWCC 3 cut(s) 224, 746, 1245
Eco53kI GAGCTC 1 cut(s) 887
Eco57I CTGAAG 2 cut(s) 1776, 1803
Eco72I CACGTG 2 cut(s) 87, 115
EcoICRI GAGCTC 1 cut(s) 887
EcoNI CCTNNNNNAGG 1 cut(s) 1122
EcoRI GAATTC 1 cut(s) 1484
EcoRII CCWGG 2 cut(s) 54, 1014
EcoT14I CCWWGG 4 cut(s) 107, 615, 781, 1241
EcoT38I GRGCYC 1 cut(s) 889
ErhI CCWWGG 4 cut(s) 107, 615, 781, 1241
Esp3I CGTCTC 1 cut(s) 27
FaqI GGGAC 2 cut(s) 153, 732
FauI CCCGC 3 cut(s) 666, 855, 1701
FauNDI CATATG 1 cut(s) 1111
FbaI TGATCA 1 cut(s) 736
FblI GTMKAC 1 cut(s) 1146
Fnu4HI GCNGC 6 cut(s) 201, 612, 702, 759, 876, 1660
FokI GGATG 1 cut(s) 1390
FriOI GRGCYC 1 cut(s) 889
Fsp4HI GCNGC 6 cut(s) 201, 612, 702, 759, 876, 1660
FspBI CTAG 3 cut(s) 557, 705, 774
GluI GCNGC 6 cut(s) 201, 612, 702, 759, 876, 1660
GsaI CCCAGC 1 cut(s) 1584
GsuI CTGGAG 4 cut(s) 174, 927, 1186, 1319
HaeIII GGCC 3 cut(s) 614, 899, 1469
HapII CCGG 6 cut(s) 180, 206, 213, 222, 237, 867
HincII GTYRAC 1 cut(s) 994
HindII GTYRAC 1 cut(s) 994
HpaI GTTAAC 1 cut(s) 994
HpaII CCGG 6 cut(s) 180, 206, 213, 222, 237, 867
HphI GGTGA 5 cut(s) 70, 350, 611, 947, 1711
Hpy166II GTNNAC 5 cut(s) 994, 1147, 1541, 1622, 1702
Hpy188I TCNGA 9 cut(s) 73, 519, 1012, 1076, 1479, 1506, 1678, 1783, 1807
Hpy188III TCNNGA 9 cut(s) 131, 170, 222, 460, 650, 734, 906, 1292, 1645
Hpy8I GTNNAC 5 cut(s) 994, 1147, 1541, 1622, 1702
Hpy99I CGWCG 1 cut(s) 32
HpyAV CCTTC 6 cut(s) 137, 960, 1087, 1118, 1459, 1784
HpyCH4III ACNGT 4 cut(s) 38, 429, 647, 1005
HpyCH4IV ACGT 3 cut(s) 86, 114, 1627
HpyCH4V TGCA 8 cut(s) 396, 1056, 1109, 1192, 1541, 1554, 1631, 1662
HpySE526I ACGT 3 cut(s) 86, 114, 1627
Kpn2I TCCGGA 1 cut(s) 221
KpnI GGTACC 1 cut(s) 213
Ksp22I TGATCA 1 cut(s) 736
KspAI GTTAAC 1 cut(s) 994
Kzo9I GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
LmnI GCTCC 4 cut(s) 182, 208, 884, 1243
Lsp1109I GCAGC 4 cut(s) 688, 745, 887, 1646
LweI GCATC 1 cut(s) 552
MaeI CTAG 3 cut(s) 557, 705, 774
MaeII ACGT 3 cut(s) 86, 114, 1627
MalI GATC 6 cut(s) 260, 738, 930, 972, 1266, 1671
MbiI CCGCTC 2 cut(s) 203, 673
MboI GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
MfeI CAATTG 1 cut(s) 401
MflI RGATCY 1 cut(s) 970
MhlI GDGCHC 3 cut(s) 438, 889, 1543
MluCI AATT 6 cut(s) 401, 439, 513, 1152, 1484, 1729
MlyI GAGTC 4 cut(s) 73, 1342, 1525, 1775
MmeI TCCRAC 5 cut(s) 775, 862, 1349, 1484, 1838
MroI TCCGGA 1 cut(s) 221
MroXI GAANNNNTTC 3 cut(s) 455, 942, 1484
MseI TTAA 5 cut(s) 993, 1023, 1734, 1827, 1870
MspA1I CMGCKG 2 cut(s) 758, 878
MspI CCGG 6 cut(s) 180, 206, 213, 222, 237, 867
MspR9I CCNGG 4 cut(s) 56, 207, 868, 1016
MunI CAATTG 1 cut(s) 401
Mva1269I GAATGC 2 cut(s) 396, 1309
MvaI CCWGG 2 cut(s) 56, 1016
NciI CCSGG 2 cut(s) 207, 868
NcoI CCATGG 2 cut(s) 107, 1241
NdeI CATATG 1 cut(s) 1111
NdeII GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
NheI GCTAGC 1 cut(s) 704
NlaIV GGNNCC 4 cut(s) 53, 94, 211, 748
NmuCI GTSAC 7 cut(s) 100, 280, 338, 721, 769, 1223, 1525
NspI RCATGY 3 cut(s) 527, 854, 1563
PaeI GCATGC 1 cut(s) 1563
PagI TCATGA 1 cut(s) 1644
PaqCI CACCTGC 1 cut(s) 1687
PciI ACATGT 1 cut(s) 523
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 2 cut(s) 396, 1309
PdmI GAANNNNTTC 3 cut(s) 455, 942, 1484
PfeI GAWTC 8 cut(s) 7, 61, 134, 216, 230, 268, 800, 1802
PkrI GCNGC 6 cut(s) 202, 613, 703, 760, 877, 1661
Ple19I CGATCG 1 cut(s) 1267
PleI GAGTC 4 cut(s) 73, 1341, 1524, 1774
PmaCI CACGTG 2 cut(s) 87, 115
PmlI CACGTG 2 cut(s) 87, 115
PpsI GAGTC 4 cut(s) 73, 1341, 1524, 1774
Ppu21I YACGTR 3 cut(s) 87, 115, 1628
PscI ACATGT 1 cut(s) 523
Psp124BI GAGCTC 1 cut(s) 889
Psp6I CCWGG 2 cut(s) 54, 1014
PspCI CACGTG 2 cut(s) 87, 115
PspFI CCCAGC 1 cut(s) 1580
PspGI CCWGG 2 cut(s) 54, 1014
PspN4I GGNNCC 4 cut(s) 53, 94, 211, 748
PspPI GGNCC 4 cut(s) 224, 746, 898, 1245
PstNI CAGNNNCTG 1 cut(s) 322
PsuI RGATCY 1 cut(s) 970
PvuI CGATCG 1 cut(s) 1267
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 3 cut(s) 211, 1182, 1855
RsaNI GTAC 3 cut(s) 210, 1181, 1854
SacI GAGCTC 1 cut(s) 889
SaqAI TTAA 5 cut(s) 993, 1023, 1734, 1827, 1870
SatI GCNGC 6 cut(s) 201, 612, 702, 759, 876, 1660
Sau3AI GATC 6 cut(s) 258, 736, 928, 970, 1264, 1669
Sau96I GGNCC 4 cut(s) 224, 746, 898, 1245
SchI GAGTC 4 cut(s) 73, 1342, 1525, 1775
ScrFI CCNGG 4 cut(s) 56, 207, 868, 1016
SduI GDGCHC 3 cut(s) 438, 889, 1543
SfaNI GCATC 1 cut(s) 552
SfcI CTRYAG 1 cut(s) 1147
SinI GGWCC 3 cut(s) 224, 746, 1245
SphI GCATGC 1 cut(s) 1563
Sse9I AATT 6 cut(s) 401, 439, 513, 1152, 1484, 1729
SspMI CTAG 3 cut(s) 557, 705, 774
SstI GAGCTC 1 cut(s) 889
StyD4I CCNGG 4 cut(s) 54, 205, 866, 1014
StyI CCWWGG 4 cut(s) 107, 615, 781, 1241
TaaI ACNGT 4 cut(s) 38, 429, 647, 1005
TaiI ACGT 3 cut(s) 89, 117, 1630
TaqI TCGA 3 cut(s) 351, 459, 1350
TaqII GACCGA 1 cut(s) 305
TasI AATT 6 cut(s) 401, 439, 513, 1152, 1484, 1729
TauI GCSGC 2 cut(s) 203, 614
TfiI GAWTC 8 cut(s) 7, 61, 134, 216, 230, 268, 800, 1802
Tru1I TTAA 5 cut(s) 993, 1023, 1734, 1827, 1870
Tru9I TTAA 5 cut(s) 993, 1023, 1734, 1827, 1870
TscAI CASTG 5 cut(s) 157, 836, 982, 1255, 1530
TseFI GTSAC 7 cut(s) 100, 280, 338, 721, 769, 1223, 1525
TseI GCWGC 4 cut(s) 701, 758, 875, 1659
Tsp45I GTSAC 7 cut(s) 100, 280, 338, 721, 769, 1223, 1525
TspDTI ATGAA 8 cut(s) 372, 611, 830, 1046, 1050, 1368, 1394, 1478
TspGWI ACGGA 3 cut(s) 45, 57, 251
TspRI CASTG 5 cut(s) 157, 836, 982, 1255, 1530
VneI GTGCAC 1 cut(s) 1539
VpaK11BI GGWCC 3 cut(s) 224, 746, 1245
XagI CCTNNNNNAGG 1 cut(s) 1122
XapI RAATTY 3 cut(s) 513, 1484, 1729
XceI RCATGY 3 cut(s) 527, 854, 1563
XmiI GTMKAC 1 cut(s) 1146
XmnI GAANNNNTTC 3 cut(s) 455, 942, 1484
XspI CTAG 3 cut(s) 557, 705, 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.