E3 ubiquitin-protein ligase ORTHRUS
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 155 |
| AfaI | GTAC | 1 cut(s) | 531 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 106, 223, 477 |
| AgsI | TTSAA | 2 cut(s) | 181, 244 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 206, 238 |
| AluBI | AGCT | 1 cut(s) | 458 |
| AluI | AGCT | 1 cut(s) | 458 |
| Alw21I | GWGCWC | 1 cut(s) | 342 |
| Alw26I | GTCTC | 1 cut(s) | 232 |
| Alw44I | GTGCAC | 1 cut(s) | 338 |
| ApaLI | GTGCAC | 1 cut(s) | 338 |
| ApoI | RAATTY | 1 cut(s) | 155 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 15, 47 |
| AsuHPI | GGTGA | 1 cut(s) | 85 |
| BaeGI | GKGCMC | 1 cut(s) | 342 |
| BanII | GRGCYC | 1 cut(s) | 506 |
| BbsI | GAAGAC | 1 cut(s) | 527 |
| Bbv12I | GWGCWC | 1 cut(s) | 342 |
| BciVI | GTATCC | 1 cut(s) | 311 |
| BcoDI | GTCTC | 1 cut(s) | 232 |
| BfaI | CTAG | 1 cut(s) | 544 |
| BfuI | GTATCC | 1 cut(s) | 311 |
| BmiI | GGNNCC | 1 cut(s) | 111 |
| BmrI | ACTGGG | 1 cut(s) | 199 |
| BmuI | ACTGGG | 1 cut(s) | 199 |
| BpiI | GAAGAC | 1 cut(s) | 527 |
| BsaI | GGTCTC | 1 cut(s) | 232 |
| BsaJI | CCNNGG | 1 cut(s) | 105 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 106, 223, 477 |
| Bse118I | RCCGGY | 1 cut(s) | 470 |
| Bse1I | ACTGG | 2 cut(s) | 194, 339 |
| BseDI | CCNNGG | 1 cut(s) | 105 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 106, 223, 477 |
| BseMII | CTCAG | 1 cut(s) | 521 |
| BseNI | ACTGG | 2 cut(s) | 194, 339 |
| BseSI | GKGCMC | 1 cut(s) | 342 |
| BsiHKAI | GWGCWC | 1 cut(s) | 342 |
| BsiSI | CCGG | 1 cut(s) | 471 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 106, 223, 477 |
| BsmAI | GTCTC | 1 cut(s) | 232 |
| Bso31I | GGTCTC | 1 cut(s) | 232 |
| Bsp1286I | GDGCHC | 2 cut(s) | 342, 506 |
| Bsp143I | GATC | 2 cut(s) | 5, 396 |
| BspCNI | CTCAG | 1 cut(s) | 520 |
| BspLI | GGNNCC | 1 cut(s) | 111 |
| BspTNI | GGTCTC | 1 cut(s) | 232 |
| BsrFI | RCCGGY | 1 cut(s) | 470 |
| BsrI | ACTGG | 2 cut(s) | 194, 339 |
| BssAI | RCCGGY | 1 cut(s) | 470 |
| BssECI | CCNNGG | 1 cut(s) | 105 |
| BssMI | GATC | 2 cut(s) | 5, 396 |
| BssT1I | CCWWGG | 1 cut(s) | 105 |
| Bst4CI | ACNGT | 2 cut(s) | 31, 235 |
| BstDEI | CTNAG | 1 cut(s) | 507 |
| BstKTI | GATC | 2 cut(s) | 8, 399 |
| BstMAI | GTCTC | 1 cut(s) | 232 |
| BstMBI | GATC | 2 cut(s) | 5, 396 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 255 |
| BstSLI | GKGCMC | 1 cut(s) | 342 |
| BstV2I | GAAGAC | 1 cut(s) | 527 |
| BsuI | GTATCC | 1 cut(s) | 311 |
| BtsIMutI | CAGTG | 1 cut(s) | 515 |
| Cfr10I | RCCGGY | 1 cut(s) | 470 |
| Csp6I | GTAC | 1 cut(s) | 530 |
| CviAII | CATG | 2 cut(s) | 267, 343 |
| CviJI | RGCY | 6 cut(s) | 185, 258, 304, 458, 474, 504 |
| CviKI_1 | RGCY | 6 cut(s) | 185, 258, 304, 458, 474, 504 |
| CviQI | GTAC | 1 cut(s) | 530 |
| DdeI | CTNAG | 1 cut(s) | 507 |
| DpnI | GATC | 2 cut(s) | 7, 398 |
| DpnII | GATC | 2 cut(s) | 5, 396 |
| Eco130I | CCWWGG | 1 cut(s) | 105 |
| Eco24I | GRGCYC | 1 cut(s) | 506 |
| Eco31I | GGTCTC | 1 cut(s) | 232 |
| Eco32I | GATATC | 1 cut(s) | 351 |
| EcoRV | GATATC | 1 cut(s) | 351 |
| EcoT14I | CCWWGG | 1 cut(s) | 105 |
| EcoT38I | GRGCYC | 1 cut(s) | 506 |
| ErhI | CCWWGG | 1 cut(s) | 105 |
| FaeI | CATG | 2 cut(s) | 270, 346 |
| FatI | CATG | 2 cut(s) | 266, 342 |
| FriOI | GRGCYC | 1 cut(s) | 506 |
| FspBI | CTAG | 1 cut(s) | 544 |
| HapII | CCGG | 1 cut(s) | 471 |
| Hin1II | CATG | 2 cut(s) | 270, 346 |
| HinfI | GANTC | 1 cut(s) | 137 |
| HpaII | CCGG | 1 cut(s) | 471 |
| HphI | GGTGA | 1 cut(s) | 85 |
| Hpy166II | GTNNAC | 3 cut(s) | 37, 238, 340 |
| Hpy188I | TCNGA | 2 cut(s) | 391, 441 |
| Hpy188III | TCNNGA | 1 cut(s) | 229 |
| Hpy8I | GTNNAC | 3 cut(s) | 37, 238, 340 |
| Hpy99I | CGWCG | 2 cut(s) | 35, 235 |
| HpyAV | CCTTC | 2 cut(s) | 93, 187 |
| HpyCH4III | ACNGT | 2 cut(s) | 31, 235 |
| HpyCH4IV | ACGT | 1 cut(s) | 532 |
| HpyCH4V | TGCA | 3 cut(s) | 270, 287, 340 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 255 |
| HpyF3I | CTNAG | 1 cut(s) | 507 |
| HpySE526I | ACGT | 1 cut(s) | 532 |
| Hsp92II | CATG | 2 cut(s) | 270, 346 |
| Kzo9I | GATC | 2 cut(s) | 5, 396 |
| LmnI | GCTCC | 1 cut(s) | 325 |
| LpnPI | CCDG | 5 cut(s) | 113, 175, 320, 460, 484 |
| MaeI | CTAG | 1 cut(s) | 544 |
| MaeII | ACGT | 1 cut(s) | 532 |
| MaeIII | GTNAC | 1 cut(s) | 25 |
| MalI | GATC | 2 cut(s) | 7, 398 |
| MboI | GATC | 2 cut(s) | 5, 396 |
| MboII | GAAGA | 2 cut(s) | 358, 527 |
| MhlI | GDGCHC | 2 cut(s) | 342, 506 |
| MluCI | AATT | 2 cut(s) | 45, 155 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MmeI | TCCRAC | 1 cut(s) | 154 |
| MnlI | CCTC | 4 cut(s) | 50, 106, 516, 516 |
| MseI | TTAA | 2 cut(s) | 159, 204 |
| MspI | CCGG | 1 cut(s) | 471 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 255 |
| NdeII | GATC | 2 cut(s) | 5, 396 |
| NlaIII | CATG | 2 cut(s) | 270, 346 |
| NlaIV | GGNNCC | 1 cut(s) | 111 |
| PleI | GAGTC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 131 |
| PspN4I | GGNNCC | 1 cut(s) | 111 |
| RsaI | GTAC | 1 cut(s) | 531 |
| RsaNI | GTAC | 1 cut(s) | 530 |
| SaqAI | TTAA | 2 cut(s) | 159, 204 |
| Sau3AI | GATC | 2 cut(s) | 5, 396 |
| SchI | GAGTC | 1 cut(s) | 131 |
| SduI | GDGCHC | 2 cut(s) | 342, 506 |
| SetI | ASST | 6 cut(s) | 42, 98, 179, 460, 495, 535 |
| Sse9I | AATT | 2 cut(s) | 45, 155 |
| SspMI | CTAG | 1 cut(s) | 544 |
| StyI | CCWWGG | 1 cut(s) | 105 |
| TaaI | ACNGT | 2 cut(s) | 31, 235 |
| TaiI | ACGT | 1 cut(s) | 535 |
| TaqI | TCGA | 3 cut(s) | 135, 230, 486 |
| TasI | AATT | 2 cut(s) | 45, 155 |
| Tru1I | TTAA | 2 cut(s) | 159, 204 |
| Tru9I | TTAA | 2 cut(s) | 159, 204 |
| TscAI | CASTG | 1 cut(s) | 515 |
| TspDTI | ATGAA | 3 cut(s) | 255, 359, 393 |
| TspRI | CASTG | 1 cut(s) | 515 |
| VneI | GTGCAC | 1 cut(s) | 338 |
| XapI | RAATTY | 1 cut(s) | 155 |
| XspI | CTAG | 1 cut(s) | 544 |