endonuclease activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 225 |
| AciI | CCGC | 2 cut(s) | 694, 726 |
| AcuI | CTGAAG | 2 cut(s) | 45, 869 |
| AfaI | GTAC | 2 cut(s) | 144, 775 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 678, 853 |
| AjnI | CCWGG | 1 cut(s) | 214 |
| AluBI | AGCT | 3 cut(s) | 49, 106, 260 |
| AluI | AGCT | 3 cut(s) | 49, 106, 260 |
| Alw26I | GTCTC | 7 cut(s) | 14, 272, 326, 374, 521, 756, 784 |
| AoxI | GGCC | 1 cut(s) | 669 |
| ApeKI | GCWGC | 1 cut(s) | 685 |
| AspS9I | GGNCC | 1 cut(s) | 198 |
| AsuHPI | GGTGA | 3 cut(s) | 55, 190, 464 |
| AvaII | GGWCC | 1 cut(s) | 198 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 871 |
| BbvI | GCAGC | 1 cut(s) | 672 |
| BccI | CCATC | 5 cut(s) | 24, 55, 455, 499, 847 |
| BceAI | ACGGC | 1 cut(s) | 310 |
| BciT130I | CCWGG | 1 cut(s) | 216 |
| BciVI | GTATCC | 1 cut(s) | 872 |
| BcoDI | GTCTC | 7 cut(s) | 14, 272, 326, 374, 521, 756, 784 |
| BfmI | CTRYAG | 1 cut(s) | 298 |
| BfuI | GTATCC | 1 cut(s) | 872 |
| BisI | GCNGC | 1 cut(s) | 686 |
| BlsI | GCNGC | 1 cut(s) | 687 |
| Bme1390I | CCNGG | 1 cut(s) | 216 |
| Bme18I | GGWCC | 1 cut(s) | 198 |
| BmgT120I | GGNCC | 1 cut(s) | 198 |
| BmiI | GGNNCC | 1 cut(s) | 701 |
| BmrFI | CCNGG | 1 cut(s) | 216 |
| BmsI | GCATC | 4 cut(s) | 66, 137, 518, 622 |
| BoxI | GACNNNNGTC | 1 cut(s) | 513 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 583, 615 |
| Bpu10I | CCTNAGC | 1 cut(s) | 384 |
| BsaI | GGTCTC | 1 cut(s) | 521 |
| BsaJI | CCNNGG | 2 cut(s) | 85, 672 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 867, 897 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 678, 853 |
| Bse3DI | GCAATG | 2 cut(s) | 831, 870 |
| BseBI | CCWGG | 1 cut(s) | 216 |
| BseDI | CCNNGG | 2 cut(s) | 85, 672 |
| BseGI | GGATG | 3 cut(s) | 323, 364, 631 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 678, 853 |
| BseMI | GCAATG | 2 cut(s) | 831, 870 |
| BseMII | CTCAG | 2 cut(s) | 537, 779 |
| BseRI | GAGGAG | 5 cut(s) | 554, 659, 664, 885, 888 |
| BseXI | GCAGC | 1 cut(s) | 672 |
| BshFI | GGCC | 1 cut(s) | 671 |
| BslFI | GGGAC | 1 cut(s) | 474 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 678, 853 |
| BsmAI | GTCTC | 7 cut(s) | 14, 272, 326, 374, 521, 756, 784 |
| BsmBI | CGTCTC | 1 cut(s) | 374 |
| BsmFI | GGGAC | 1 cut(s) | 474 |
| BsnI | GGCC | 1 cut(s) | 671 |
| Bso31I | GGTCTC | 1 cut(s) | 521 |
| Bsp1407I | TGTACA | 1 cut(s) | 142 |
| Bsp143I | GATC | 3 cut(s) | 28, 454, 499 |
| Bsp19I | CCATGG | 1 cut(s) | 672 |
| BspACI | CCGC | 2 cut(s) | 694, 726 |
| BspANI | GGCC | 1 cut(s) | 671 |
| BspCNI | CTCAG | 2 cut(s) | 538, 780 |
| BspHI | TCATGA | 1 cut(s) | 324 |
| BspLI | GGNNCC | 1 cut(s) | 701 |
| BspTNI | GGTCTC | 1 cut(s) | 521 |
| BsrDI | GCAATG | 2 cut(s) | 831, 870 |
| BsrGI | TGTACA | 1 cut(s) | 142 |
| BssECI | CCNNGG | 2 cut(s) | 85, 672 |
| BssMI | GATC | 3 cut(s) | 28, 454, 499 |
| BssT1I | CCWWGG | 2 cut(s) | 85, 672 |
| Bst2UI | CCWGG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 3 cut(s) | 331, 368, 410 |
| Bst6I | CTCTTC | 3 cut(s) | 468, 636, 650 |
| BstAUI | TGTACA | 1 cut(s) | 142 |
| BstC8I | GCNNGC | 3 cut(s) | 736, 740, 822 |
| BstDEI | CTNAG | 3 cut(s) | 384, 546, 788 |
| BstDSI | CCRYGG | 1 cut(s) | 672 |
| BstF5I | GGATG | 3 cut(s) | 323, 364, 631 |
| BstKTI | GATC | 3 cut(s) | 31, 457, 502 |
| BstMAI | GTCTC | 7 cut(s) | 14, 272, 326, 374, 521, 756, 784 |
| BstMBI | GATC | 3 cut(s) | 28, 454, 499 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 725, 817 |
| BstNI | CCWGG | 1 cut(s) | 216 |
| BstNSI | RCATGY | 1 cut(s) | 824 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 513 |
| BstSCI | CCNGG | 1 cut(s) | 214 |
| BstSFI | CTRYAG | 1 cut(s) | 298 |
| BstV1I | GCAGC | 1 cut(s) | 672 |
| BsuI | GTATCC | 1 cut(s) | 872 |
| BsuRI | GGCC | 1 cut(s) | 671 |
| BtgI | CCRYGG | 1 cut(s) | 672 |
| BtsCI | GGATG | 3 cut(s) | 323, 364, 631 |
| Cac8I | GCNNGC | 3 cut(s) | 736, 740, 822 |
| CciI | TCATGA | 1 cut(s) | 324 |
| Cfr13I | GGNCC | 1 cut(s) | 198 |
| Csp6I | GTAC | 2 cut(s) | 143, 774 |
| CviAII | CATG | 7 cut(s) | 37, 325, 673, 689, 715, 766, 821 |
| CviQI | GTAC | 2 cut(s) | 143, 774 |
| DdeI | CTNAG | 3 cut(s) | 384, 546, 788 |
| DpnI | GATC | 3 cut(s) | 30, 456, 501 |
| DpnII | GATC | 3 cut(s) | 28, 454, 499 |
| Eam1104I | CTCTTC | 3 cut(s) | 468, 636, 650 |
| EarI | CTCTTC | 3 cut(s) | 468, 636, 650 |
| Eco130I | CCWWGG | 2 cut(s) | 85, 672 |
| Eco31I | GGTCTC | 1 cut(s) | 521 |
| Eco32I | GATATC | 2 cut(s) | 399, 427 |
| Eco47I | GGWCC | 1 cut(s) | 198 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 869 |
| EcoRII | CCWGG | 1 cut(s) | 214 |
| EcoRV | GATATC | 2 cut(s) | 399, 427 |
| EcoT14I | CCWWGG | 2 cut(s) | 85, 672 |
| ErhI | CCWWGG | 2 cut(s) | 85, 672 |
| Esp3I | CGTCTC | 1 cut(s) | 374 |
| FaeI | CATG | 7 cut(s) | 40, 328, 676, 692, 718, 769, 824 |
| FaqI | GGGAC | 1 cut(s) | 474 |
| FatI | CATG | 7 cut(s) | 36, 324, 672, 688, 714, 765, 820 |
| FblI | GTMKAC | 1 cut(s) | 225 |
| Fnu4HI | GCNGC | 1 cut(s) | 686 |
| FokI | GGATG | 3 cut(s) | 330, 371, 638 |
| Fsp4HI | GCNGC | 1 cut(s) | 686 |
| GluI | GCNGC | 1 cut(s) | 686 |
| HaeIII | GGCC | 1 cut(s) | 671 |
| Hin1II | CATG | 7 cut(s) | 40, 328, 676, 692, 718, 769, 824 |
| HindIII | AAGCTT | 1 cut(s) | 47 |
| HinfI | GANTC | 2 cut(s) | 184, 346 |
| HphI | GGTGA | 3 cut(s) | 55, 190, 464 |
| Hpy166II | GTNNAC | 3 cut(s) | 226, 364, 441 |
| Hpy188I | TCNGA | 6 cut(s) | 277, 424, 504, 759, 789, 798 |
| Hpy188III | TCNNGA | 8 cut(s) | 32, 109, 188, 325, 373, 414, 458, 497 |
| Hpy8I | GTNNAC | 3 cut(s) | 226, 364, 441 |
| HpyAV | CCTTC | 5 cut(s) | 442, 529, 544, 568, 671 |
| HpyCH4III | ACNGT | 3 cut(s) | 331, 368, 410 |
| HpyCH4IV | ACGT | 1 cut(s) | 882 |
| HpyCH4V | TGCA | 4 cut(s) | 79, 688, 742, 824 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 725, 817 |
| HpyF3I | CTNAG | 3 cut(s) | 384, 546, 788 |
| HpySE526I | ACGT | 1 cut(s) | 882 |
| Hsp92II | CATG | 7 cut(s) | 40, 328, 676, 692, 718, 769, 824 |
| Kzo9I | GATC | 3 cut(s) | 28, 454, 499 |
| Lsp1109I | GCAGC | 1 cut(s) | 672 |
| LweI | GCATC | 4 cut(s) | 66, 137, 518, 622 |
| MaeII | ACGT | 1 cut(s) | 882 |
| MaeIII | GTNAC | 1 cut(s) | 338 |
| MalI | GATC | 3 cut(s) | 30, 456, 501 |
| MboI | GATC | 3 cut(s) | 28, 454, 499 |
| MboII | GAAGA | 8 cut(s) | 38, 457, 485, 583, 641, 653, 667, 862 |
| MmeI | TCCRAC | 2 cut(s) | 544, 737 |
| MseI | TTAA | 2 cut(s) | 609, 898 |
| MslI | CAYNNNNRTG | 1 cut(s) | 41 |
| MspA1I | CMGCKG | 1 cut(s) | 696 |
| MspR9I | CCNGG | 1 cut(s) | 216 |
| MvaI | CCWGG | 1 cut(s) | 216 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 725, 817 |
| NcoI | CCATGG | 1 cut(s) | 672 |
| NdeII | GATC | 3 cut(s) | 28, 454, 499 |
| NlaIII | CATG | 7 cut(s) | 40, 328, 676, 692, 718, 769, 824 |
| NlaIV | GGNNCC | 1 cut(s) | 701 |
| NspI | RCATGY | 1 cut(s) | 824 |
| PaeI | GCATGC | 1 cut(s) | 824 |
| PagI | TCATGA | 1 cut(s) | 324 |
| PfeI | GAWTC | 2 cut(s) | 184, 346 |
| PfoI | TCCNGGA | 1 cut(s) | 214 |
| PkrI | GCNGC | 1 cut(s) | 687 |
| PshAI | GACNNNNGTC | 1 cut(s) | 513 |
| Psp6I | CCWGG | 1 cut(s) | 214 |
| PspGI | CCWGG | 1 cut(s) | 214 |
| PspN4I | GGNNCC | 1 cut(s) | 701 |
| PspPI | GGNCC | 1 cut(s) | 198 |
| RsaI | GTAC | 2 cut(s) | 144, 775 |
| RsaNI | GTAC | 2 cut(s) | 143, 774 |
| RseI | CAYNNNNRTG | 1 cut(s) | 41 |
| SaqAI | TTAA | 2 cut(s) | 609, 898 |
| SatI | GCNGC | 1 cut(s) | 686 |
| Sau3AI | GATC | 3 cut(s) | 28, 454, 499 |
| Sau96I | GGNCC | 1 cut(s) | 198 |
| ScrFI | CCNGG | 1 cut(s) | 216 |
| SetI | ASST | 9 cut(s) | 51, 108, 151, 180, 262, 275, 555, 609, 885 |
| SfaNI | GCATC | 4 cut(s) | 66, 137, 518, 622 |
| SfcI | CTRYAG | 1 cut(s) | 298 |
| SinI | GGWCC | 1 cut(s) | 198 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 41 |
| SphI | GCATGC | 1 cut(s) | 824 |
| SsiI | CCGC | 2 cut(s) | 694, 726 |
| StyD4I | CCNGG | 1 cut(s) | 214 |
| StyI | CCWWGG | 2 cut(s) | 85, 672 |
| TaaI | ACNGT | 3 cut(s) | 331, 368, 410 |
| TaiI | ACGT | 1 cut(s) | 885 |
| TaqI | TCGA | 1 cut(s) | 459 |
| TatI | WGTACW | 2 cut(s) | 142, 773 |
| TfiI | GAWTC | 2 cut(s) | 184, 346 |
| Tru1I | TTAA | 2 cut(s) | 609, 898 |
| Tru9I | TTAA | 2 cut(s) | 609, 898 |
| TseI | GCWGC | 1 cut(s) | 685 |
| TspDTI | ATGAA | 1 cut(s) | 642 |
| VpaK11BI | GGWCC | 1 cut(s) | 198 |
| XceI | RCATGY | 1 cut(s) | 824 |
| XmiI | GTMKAC | 1 cut(s) | 225 |