MD12G1049300.v1.1

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000378
Physical Location & Seq
Reverse (-)
5630493 .. 5634418
3926 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1049300.v1.1.491

Sequence Viewer

Length: 1509 bp
ATGAACCGCTCTCGCCTGACGTCGCTGTTCAATTTCTACTCTCGTTTCGGTTTCCGAAACGTACCGGGCGTTTCGCTCTACTCGACGGAGACGTATGCCCGTCCTTACAGAGAGTCCTGGAGAGGCACACTGAACACCCTCTACCGTCGGATTTCTCGCTCCGGAGATCCGGCGGCCCCCATTACGCCGATTCTCGACAAATGGGTCGAAGAAGGCCGAACCGCACACAAAGATGCCCTCGTCACCATCATCAAGGAGCTCAGGCAGTACAAGAAGCACAAGCACGCTCTTGAGGTATCAATGTGGGTGTCTGACAAACGGTACTTTGAGCTTACGATTCCCGATGTTGCCATCAGGCTTGATTTGATTGGAAAAGTTCATGGAATAAAACAAGCTGAGGATTATTTTAACAACATTCCAAAACAGTTGAAAGGTCGGGATGTTTACTGTGCTCTACTGAACGTCTTTGCTCATGCAAAACTTGTGGAAAAGGCTGAGGAAATTATGCAGACGATGAGGGATTTGGGGTTTGCTAGGACACCGTTGTCCTATAACATTTTGCTCAATTTGTATTATCAGAGTGGAAACACTGACAAATTCAATGTTCTAATGAGTGAAATGGAAGAGAGGGGAATTGGTCGTGACAAATACACTTATTGTATCCAGCTCAATGTATGTGCAGCTGCTTCTGATCTTGAGGGAATTGACAAGGTTATGGCAGAGTGGGAATCCAATCCCGAGGTTCATATGGATTGGGATAGTTATACCAATGCAGCAAATGGTTATACGAAAACACAAAATGTGAAAAAGGCTTTGGCAATGCTAGAGAAGGCTGAGAAACTGATACCAAGTTCTAAAAGAAAGAGGGGAGCATATGAGTACCTTATGACACAATATGCAGCACTAGGGGAGAAAGATAGTGTTATGAGACTGTGGGAACTATACAAGAAGCACTTGAAAATATACAATAGGGGTTATATAAGTATAATAACCTCAGTCTTGAAGGTTGGCGACATTGAAAGTGCCGAGAAGATCTATGACGAATGGGAATCCAAGAATTTAACTCCAGACATTCGTATCCCAAATTTCTTGATCAGTGCTTATACCAAAAAAGGCCTAGTTGACAAGGCTGAATCCATTATTAACAGGATAGTGCTGAAGGGTGGGAAACCGGATGCGAAGACTTGGTACTATCTGGCAAAGGGCTATCTCAATCATGACCAAACTGAGAAGACAGTTGAGTCGATGAGGAAAGCACTTTCAGTTGTTGAGGGGTCACGGTGGACGCCAGACAGGGATGTTGTGGCTGCCTGTATGACATACATGAAACAGAAAGCAGATGTGGAAGGATCTGAAGAATTTATAAGACTACTCGGAGAGAAGTGTAGCTTCCCCGAAAGTATTCAGGAGAAGTTGTTGGCTTACATAAATAATGAGGATTCAGTCACTGTAGAAATCGGTGACCTGGAATGGGATCATCTGAACAGAGTTGTGAAAGAAGTGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

503

Amino Acids

57.91

Weight (kDa)

8.44

Isoelectric Point (pI)

28.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 183 - 227 2.7e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000378)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20710 AT2G20710 AT2G20720
fragaria_vesca FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1364
AasI GACNNNNNNGTC 3 cut(s) 203, 544, 1240
AatII GACGTC 1 cut(s) 23
AccBSI CCGCTC 1 cut(s) 9
AccIII TCCGGA 1 cut(s) 161
AciI CCGC 3 cut(s) 7, 173, 222
AclWI GGATC 3 cut(s) 161, 1357, 1482
AcsI RAATTY 4 cut(s) 596, 1057, 1084, 1358
AcuI CTGAAG 2 cut(s) 1178, 1374
AcyI GRCGYC 2 cut(s) 20, 1286
AfaI GTAC 5 cut(s) 63, 269, 323, 881, 1190
AfiI CCNNNNNNNGG 1 cut(s) 1471
AgsI TTSAA 6 cut(s) 31, 430, 601, 958, 1003, 1019
AjnI CCWGG 2 cut(s) 116, 1464
AjuI GAANNNNNNNTTGG 2 cut(s) 797, 829
AluBI AGCT 6 cut(s) 259, 331, 395, 667, 683, 1389
AluI AGCT 6 cut(s) 259, 331, 395, 667, 683, 1389
Alw21I GWGCWC 2 cut(s) 261, 454
Alw26I GTCTC 2 cut(s) 83, 922
AlwI GGATC 3 cut(s) 161, 1357, 1482
AlwNI CAGNNNCTG 1 cut(s) 1448
Ama87I CYCGRG 1 cut(s) 737
Aor13HI TCCGGA 1 cut(s) 161
AoxI GGCC 3 cut(s) 174, 214, 1114
ApeKI GCWGC 5 cut(s) 680, 683, 773, 899, 1307
ApoI RAATTY 4 cut(s) 596, 1057, 1084, 1358
Asp700I GAANNNNTTC 1 cut(s) 1401
AspS9I GGNCC 1 cut(s) 175
AsuC2I CCSGG 1 cut(s) 66
AsuHPI GGTGA 2 cut(s) 235, 1472
AvaI CYCGRG 1 cut(s) 737
BaeI ACNNNNGTAYC 2 cut(s) 1060, 1093
BanII GRGCYC 1 cut(s) 261
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
BbsI GAAGAC 2 cut(s) 1187, 1238
Bbv12I GWGCWC 2 cut(s) 261, 454
BbvCI CCTCAGC 2 cut(s) 396, 495
BbvI GCAGC 5 cut(s) 670, 692, 785, 911, 1294
BccI CCATC 2 cut(s) 254, 359
BciT130I CCWGG 2 cut(s) 118, 1466
BciVI GTATCC 2 cut(s) 671, 1088
BclI TGATCA 1 cut(s) 1092
BcnI CCSGG 1 cut(s) 66
BcoDI GTCTC 2 cut(s) 83, 922
BfaI CTAG 4 cut(s) 534, 824, 905, 1118
BfmI CTRYAG 1 cut(s) 1449
BfuI GTATCC 2 cut(s) 671, 1088
BglII AGATCT 1 cut(s) 1032
BisI GCNGC 6 cut(s) 174, 681, 684, 774, 900, 1308
BlsI GCNGC 6 cut(s) 175, 682, 685, 775, 901, 1309
Bme1390I CCNGG 3 cut(s) 66, 118, 1466
BmeT110I CYCGRG 1 cut(s) 737
BmgT120I GGNCC 1 cut(s) 175
BmiI GGNNCC 1 cut(s) 177
BmrFI CCNGG 3 cut(s) 66, 118, 1466
BmsI GCATC 2 cut(s) 223, 1165
BpiI GAAGAC 2 cut(s) 1187, 1238
BpmI CTGGAG 2 cut(s) 139, 1050
Bpu10I CCTNAGC 3 cut(s) 260, 396, 495
BpuEI CTTGAG 2 cut(s) 311, 716
BpuMI CCSGG 1 cut(s) 66
BsaHI GRCGYC 2 cut(s) 20, 1286
BsaJI CCNNGG 1 cut(s) 738
BsaWI WCCGGW 2 cut(s) 161, 1171
BsaXI ACNNNNNCTCC 2 cut(s) 1400, 1430
Bsc4I CCNNNNNNNGG 1 cut(s) 1471
Bse3DI GCAATG 1 cut(s) 825
BseAI TCCGGA 1 cut(s) 161
BseBI CCWGG 2 cut(s) 118, 1466
BseDI CCNNGG 1 cut(s) 738
BseGI GGATG 3 cut(s) 445, 1180, 1303
BseLI CCNNNNNNNGG 1 cut(s) 1471
BseMI GCAATG 1 cut(s) 825
BseMII CTCAG 6 cut(s) 274, 387, 486, 825, 1008, 1218
BseXI GCAGC 5 cut(s) 670, 692, 785, 911, 1294
BsgI GTGCAG 1 cut(s) 699
BshFI GGCC 3 cut(s) 176, 216, 1116
BsiHKAI GWGCWC 2 cut(s) 261, 454
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 4 cut(s) 65, 162, 170, 1172
BslI CCNNNNNNNGG 1 cut(s) 1471
BsmAI GTCTC 2 cut(s) 83, 922
BsmBI CGTCTC 1 cut(s) 83
BsnI GGCC 3 cut(s) 176, 216, 1116
BsoBI CYCGRG 1 cut(s) 737
Bsp1286I GDGCHC 2 cut(s) 261, 454
Bsp13I TCCGGA 1 cut(s) 161
Bsp143I GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
BspACI CCGC 3 cut(s) 7, 173, 222
BspANI GGCC 3 cut(s) 176, 216, 1116
BspCNI CTCAG 6 cut(s) 273, 388, 487, 826, 1007, 1219
BspEI TCCGGA 1 cut(s) 161
BspHI TCATGA 1 cut(s) 1216
BspLI GGNNCC 1 cut(s) 177
BspPI GGATC 3 cut(s) 161, 1357, 1482
BsrBI CCGCTC 1 cut(s) 9
BsrDI GCAATG 1 cut(s) 825
BssECI CCNNGG 1 cut(s) 738
BssMI GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
BssNI GRCGYC 2 cut(s) 20, 1286
Bst2UI CCWGG 2 cut(s) 118, 1466
Bst4CI ACNGT 9 cut(s) 146, 321, 426, 449, 543, 933, 1237, 1281, 1450
Bst6I CTCTTC 1 cut(s) 618
BstACI GRCGYC 2 cut(s) 20, 1286
BstC8I GCNNGC 1 cut(s) 285
BstDEI CTNAG 6 cut(s) 260, 396, 495, 834, 994, 1227
BstEII GGTNACC 1 cut(s) 1460
BstF5I GGATG 3 cut(s) 445, 1180, 1303
BstKTI GATC 6 cut(s) 169, 694, 1035, 1095, 1352, 1477
BstMAI GTCTC 2 cut(s) 83, 922
BstMBI GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
BstNI CCWGG 2 cut(s) 118, 1466
BstPI GGTNACC 1 cut(s) 1460
BstSCI CCNGG 3 cut(s) 64, 116, 1464
BstSFI CTRYAG 1 cut(s) 1449
BstV1I GCAGC 5 cut(s) 670, 692, 785, 911, 1294
BstV2I GAAGAC 2 cut(s) 1187, 1238
BstX2I RGATCY 3 cut(s) 166, 1032, 1349
BstYI RGATCY 3 cut(s) 166, 1032, 1349
BsuI GTATCC 2 cut(s) 671, 1088
BsuRI GGCC 3 cut(s) 176, 216, 1116
BtsCI GGATG 3 cut(s) 445, 1180, 1303
BtsIMutI CAGTG 4 cut(s) 128, 588, 1102, 1446
Cac8I GCNNGC 1 cut(s) 285
CaiI CAGNNNCTG 1 cut(s) 1448
CciI TCATGA 1 cut(s) 1216
Cfr13I GGNCC 1 cut(s) 175
CseI GACGC 1 cut(s) 1294
Csp6I GTAC 5 cut(s) 62, 268, 322, 880, 1189
CspCI CAANNNNNGTGG 2 cut(s) 465, 500
CviAII CATG 4 cut(s) 380, 473, 1217, 1324
CviQI GTAC 5 cut(s) 62, 268, 322, 880, 1189
DdeI CTNAG 6 cut(s) 260, 396, 495, 834, 994, 1227
DpnI GATC 6 cut(s) 168, 693, 1034, 1094, 1351, 1476
DpnII GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
DrdI GACNNNNNNGTC 3 cut(s) 203, 544, 1240
DseDI GACNNNNNNGTC 3 cut(s) 203, 544, 1240
Eam1104I CTCTTC 1 cut(s) 618
EarI CTCTTC 1 cut(s) 618
Ecl136II GAGCTC 1 cut(s) 259
Eco147I AGGCCT 1 cut(s) 1116
Eco24I GRGCYC 1 cut(s) 261
Eco53kI GAGCTC 1 cut(s) 259
Eco57I CTGAAG 2 cut(s) 1178, 1374
Eco88I CYCGRG 1 cut(s) 737
Eco91I GGTNACC 1 cut(s) 1460
EcoICRI GAGCTC 1 cut(s) 259
EcoO65I GGTNACC 1 cut(s) 1460
EcoRII CCWGG 2 cut(s) 116, 1464
EcoT38I GRGCYC 1 cut(s) 261
Esp3I CGTCTC 1 cut(s) 83
FaeI CATG 4 cut(s) 383, 476, 1220, 1327
FalI AAGNNNNNCTT 4 cut(s) 938, 970, 1373, 1405
FatI CATG 4 cut(s) 379, 472, 1216, 1323
FauNDI CATATG 2 cut(s) 747, 874
FbaI TGATCA 1 cut(s) 1092
Fnu4HI GCNGC 6 cut(s) 174, 681, 684, 774, 900, 1308
FokI GGATG 3 cut(s) 452, 1187, 1310
FriOI GRGCYC 1 cut(s) 261
Fsp4HI GCNGC 6 cut(s) 174, 681, 684, 774, 900, 1308
FspBI CTAG 4 cut(s) 534, 824, 905, 1118
GluI GCNGC 6 cut(s) 174, 681, 684, 774, 900, 1308
GsuI CTGGAG 2 cut(s) 139, 1050
HaeIII GGCC 3 cut(s) 176, 216, 1116
HapII CCGG 4 cut(s) 65, 162, 170, 1172
HgaI GACGC 1 cut(s) 1294
Hin1I GRCGYC 2 cut(s) 20, 1286
Hin1II CATG 4 cut(s) 383, 476, 1220, 1327
HincII GTYRAC 1 cut(s) 1123
HindII GTYRAC 1 cut(s) 1123
HinfI GANTC 8 cut(s) 113, 190, 337, 728, 1049, 1133, 1241, 1439
HpaII CCGG 4 cut(s) 65, 162, 170, 1172
HphI GGTGA 2 cut(s) 235, 1472
Hpy166II GTNNAC 3 cut(s) 445, 1123, 1284
Hpy188I TCNGA 8 cut(s) 56, 150, 313, 579, 691, 1354, 1376, 1482
Hpy8I GTNNAC 3 cut(s) 445, 1123, 1284
Hpy99I CGWCG 3 cut(s) 25, 88, 150
HpyAV CCTTC 5 cut(s) 206, 823, 997, 1153, 1340
HpyCH4III ACNGT 9 cut(s) 146, 321, 426, 449, 543, 933, 1237, 1281, 1450
HpyCH4IV ACGT 4 cut(s) 20, 60, 92, 462
HpyCH4V TGCA 5 cut(s) 476, 508, 680, 773, 899
HpyF3I CTNAG 6 cut(s) 260, 396, 495, 834, 994, 1227
HpySE526I ACGT 4 cut(s) 20, 60, 92, 462
Hsp92I GRCGYC 2 cut(s) 20, 1286
Hsp92II CATG 4 cut(s) 383, 476, 1220, 1327
Kpn2I TCCGGA 1 cut(s) 161
Ksp22I TGATCA 1 cut(s) 1092
Kzo9I GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
LmnI GCTCC 3 cut(s) 164, 256, 869
Lsp1109I GCAGC 5 cut(s) 670, 692, 785, 911, 1294
LweI GCATC 2 cut(s) 223, 1165
MaeI CTAG 4 cut(s) 534, 824, 905, 1118
MaeII ACGT 4 cut(s) 20, 60, 92, 462
MaeIII GTNAC 5 cut(s) 241, 641, 1275, 1444, 1460
MalI GATC 6 cut(s) 168, 693, 1034, 1094, 1351, 1476
MbiI CCGCTC 1 cut(s) 9
MboI GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
MboII GAAGA 6 cut(s) 221, 635, 1042, 1192, 1243, 1367
MflI RGATCY 3 cut(s) 166, 1032, 1349
MhlI GDGCHC 2 cut(s) 261, 454
MluCI AATT 9 cut(s) 31, 501, 565, 596, 633, 702, 1057, 1084, 1358
MlyI GAGTC 2 cut(s) 122, 1250
MmeI TCCRAC 1 cut(s) 128
MroI TCCGGA 1 cut(s) 161
MroXI GAANNNNTTC 1 cut(s) 1401
MseI TTAA 3 cut(s) 408, 1061, 1143
MslI CAYNNNNRTG 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 683
MspI CCGG 4 cut(s) 65, 162, 170, 1172
MspR9I CCNGG 3 cut(s) 66, 118, 1466
MvaI CCWGG 2 cut(s) 118, 1466
NciI CCSGG 1 cut(s) 66
NdeI CATATG 2 cut(s) 747, 874
NdeII GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
NlaIII CATG 4 cut(s) 383, 476, 1220, 1327
NlaIV GGNNCC 1 cut(s) 177
NmeAIII GCCGAG 1 cut(s) 1051
NmuCI GTSAC 5 cut(s) 241, 641, 1275, 1444, 1460
PagI TCATGA 1 cut(s) 1216
PceI AGGCCT 1 cut(s) 1116
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 80, 89
PdmI GAANNNNTTC 1 cut(s) 1401
PfeI GAWTC 6 cut(s) 190, 337, 728, 1049, 1133, 1439
PfoI TCCNGGA 1 cut(s) 116
PkrI GCNGC 6 cut(s) 175, 682, 685, 775, 901, 1309
PleI GAGTC 2 cut(s) 121, 1249
PpsI GAGTC 2 cut(s) 121, 1249
PsiI TTATAA 1 cut(s) 1364
Psp124BI GAGCTC 1 cut(s) 261
Psp6I CCWGG 2 cut(s) 116, 1464
PspEI GGTNACC 1 cut(s) 1460
PspGI CCWGG 2 cut(s) 116, 1464
PspN4I GGNNCC 1 cut(s) 177
PspPI GGNCC 1 cut(s) 175
PsrI GAACNNNNNNTAC 2 cut(s) 125, 157
PstNI CAGNNNCTG 1 cut(s) 1448
PsuI RGATCY 3 cut(s) 166, 1032, 1349
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 5 cut(s) 63, 269, 323, 881, 1190
RsaNI GTAC 5 cut(s) 62, 268, 322, 880, 1189
RseI CAYNNNNRTG 1 cut(s) 231
SacI GAGCTC 1 cut(s) 261
SaqAI TTAA 3 cut(s) 408, 1061, 1143
SatI GCNGC 6 cut(s) 174, 681, 684, 774, 900, 1308
Sau3AI GATC 6 cut(s) 166, 691, 1032, 1092, 1349, 1474
Sau96I GGNCC 1 cut(s) 175
SchI GAGTC 2 cut(s) 122, 1250
ScrFI CCNGG 3 cut(s) 66, 118, 1466
SduI GDGCHC 2 cut(s) 261, 454
SfaNI GCATC 2 cut(s) 223, 1165
SfcI CTRYAG 1 cut(s) 1449
SmiMI CAYNNNNRTG 1 cut(s) 231
SmlI CTYRAG 2 cut(s) 290, 695
SmoI CTYRAG 2 cut(s) 290, 695
Sse9I AATT 9 cut(s) 31, 501, 565, 596, 633, 702, 1057, 1084, 1358
SseBI AGGCCT 1 cut(s) 1116
SsiI CCGC 3 cut(s) 7, 173, 222
SspMI CTAG 4 cut(s) 534, 824, 905, 1118
SstI GAGCTC 1 cut(s) 261
StuI AGGCCT 1 cut(s) 1116
StyD4I CCNGG 3 cut(s) 64, 116, 1464
TaaI ACNGT 9 cut(s) 146, 321, 426, 449, 543, 933, 1237, 1281, 1450
TaiI ACGT 4 cut(s) 23, 63, 95, 465
TaqI TCGA 4 cut(s) 83, 195, 207, 1244
TasI AATT 9 cut(s) 31, 501, 565, 596, 633, 702, 1057, 1084, 1358
TatI WGTACW 1 cut(s) 267
TauI GCSGC 1 cut(s) 176
TfiI GAWTC 6 cut(s) 190, 337, 728, 1049, 1133, 1439
Tru1I TTAA 3 cut(s) 408, 1061, 1143
Tru9I TTAA 3 cut(s) 408, 1061, 1143
TscAI CASTG 4 cut(s) 135, 595, 1102, 1453
TseFI GTSAC 5 cut(s) 241, 641, 1275, 1444, 1460
TseI GCWGC 5 cut(s) 680, 683, 773, 899, 1307
Tsp45I GTSAC 5 cut(s) 241, 641, 1275, 1444, 1460
TspDTI ATGAA 4 cut(s) 17, 368, 734, 1340
TspGWI ACGGA 1 cut(s) 101
TspRI CASTG 4 cut(s) 135, 595, 1102, 1453
XapI RAATTY 4 cut(s) 596, 1057, 1084, 1358
XmnI GAANNNNTTC 1 cut(s) 1401
XspI CTAG 4 cut(s) 534, 824, 905, 1118
ZraI GACGTC 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.