Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000378

Physical Location & Seq

Genomic Coordinates Reverse (-)

31823093 .. 31826018

Gene Structure 2926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1248800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGATTAAGCTTCTTGGTTCAAATCCACGGCGTGTCAATGCCATTTCTGGGAGTTCTTGTGCACTGTTTTGCTCAATTAAGGCCGCGGCCTCCTCCCAACCCCCATTTGAGCCTTTGTACATTAGGATCTCCCGGGCCGGAAATCCTAGGGTTTCCGTTGTACCGATTCTCAATCAGTGGGTGGAAGAAGGGAGAGATGTCAAGAAATGGGAACTCCAGAGTTTCATCAAGCTGTTCCGTAAATATCGCCGCTACAGCCACGCTCTCCAGATTTCAGAATGGATGAGTGATGCACGGAACCAGTATCTAACTCCGGGAGATATTGCGGTTCGGCTAGATTTGATCTCAAAGGTTCATGGCCTACAACAAGCTGAGGCGTACTTCAATAGCATACCAGACCAACTGAGAAACTTCAAGGTGTATGGTGCTCTTTTATTCAGCTATGTAGAGAATAAATCTTCAGAAAAGGCTGAGATTATTTTCGAGAAGATGAACGAGTTAGGTTATTTGAAGGGATCAGTAGCTTATAATGCTATGCTGACCCTCTATTCTCAGATAGGTAAACATGAAAAACTAGATATTCTAGTAAAGGAGATGGAAGAAAAGGGCATTGATTATGACAGTTATACATTGAAGATTCTATTGAATTCGTATGCTGCCATTTCTGAGATAGACAGAATGGAGAAGCTTTTAATGAAGATAGACGCCGATCCTTTGGTCAATGTAGACTGGAATGGTTATGTTATTGCAGCAAATGGGTTCTTGAAAGCTGGCTTATTAGAGAAGGCTTCAACAATGCTTAGGCGATCAGAGCAGCTCATCAGCAATAAAACAAGTAAATTTGCTTCTGAAGTCCTCCTCACTTTATATGCTACTATTGGGAATAAAGATGAGGTTTATCGTATTTGGAATATTTACAAAAATATGGTGGGATTATACAATTCTGGCTATCTTTGTATGCTAAGTTCATTAGTAAAGCTGGGTGACATTGATAGTGCTGAGATGATCGTGGAGGAATGGGAATCTGTGGCCAAGTTCTTTGACATTCGAATTCCCAACTTGCTGATCACTGCGTACTGCAAGAAAGATCTTTTGGAGAAGGCTGATTTATATATAAAGCGGCTTGAAGAGAGCGGTAAGGAGCTGGATGCAAGCATTTGGACTCATTTGGCAACCGGATATCATATGAATGGTCAGATGGATAAGGCAGTGGAAACAATGAAAAAAGCAATATTAGCAAGTCGAGCAGGATGGAAGTTCAATCATCTAACTTTGGCTGCGTGTCTTGAATACTTGAAAGAGAAGGGAGACGTGGAAGTAGCACAAGAGCTTTCGAGATTAATTAGAGAAACAGATCATTTTTCAGCTGATTTGTGTGATAAATTAGATAAGTATGTTATTGGTGAACTTCATAGAAGAGATGGGGAAGTATCACAAGAACTTTTGAGATTGTTGACAGGGAGTGATCATCTTTCAACCGATTTGTATGATAAGGTTGAAGATTACACATATGATGAATCTAAGGTTATGGCATTGATAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

515

Amino Acids

58.65

Weight (kDa)

6.09

Isoelectric Point (pI)

33.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	172 - 219	2.7e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20710 AT2G20710 AT2G20720
fragaria_vesca	FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica	MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica	Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis	pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis	RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata	RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora	Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii	Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa	Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha	Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana	Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	528
AccBSI	CCGCTC	1 cut(s)	1134
AccI	GTMKAC	1 cut(s)	726
AccII	CGCG	1 cut(s)	86
AciI	CCGC	6 cut(s)	84, 86, 250, 326, 1120, 1134
AclWI	GGATC	3 cut(s)	134, 523, 704
AcoI	YGGCCR	1 cut(s)	1029
AcsI	RAATTY	3 cut(s)	646, 839, 1050
AcuI	CTGAAG	2 cut(s)	444, 870
AcyI	GRCGYC	1 cut(s)	705
AdeI	CACNNNGTG	1 cut(s)	32
AfaI	GTAC	4 cut(s)	119, 162, 380, 1076
AfiI	CCNNNNNNNGG	1 cut(s)	48
AjiI	CACGTC	1 cut(s)	1312
AjuI	GAANNNNNNNTTGG	2 cut(s)	1076, 1108
Alw21I	GWGCWC	2 cut(s)	64, 430
Alw26I	GTCTC	1 cut(s)	1302
Alw44I	GTGCAC	1 cut(s)	60
AlwI	GGATC	3 cut(s)	134, 523, 704
Ama87I	CYCGRG	1 cut(s)	132
AoxI	GGCC	5 cut(s)	81, 87, 135, 358, 1029
ApaLI	GTGCAC	1 cut(s)	60
ApeKI	GCWGC	4 cut(s)	656, 749, 814, 1277
ApoI	RAATTY	3 cut(s)	646, 839, 1050
AseI	ATTAAT	1 cut(s)	1340
AspA2I	CCTAGG	1 cut(s)	146
AspS9I	GGNCC	1 cut(s)	135
AsuC2I	CCSGG	3 cut(s)	133, 134, 315
AsuHPI	GGTGA	2 cut(s)	995, 1415
AsuII	TTCGAA	1 cut(s)	1048
AvaI	CYCGRG	1 cut(s)	132
AvrII	CCTAGG	1 cut(s)	146
BaeGI	GKGCMC	1 cut(s)	64
BalI	TGGCCA	1 cut(s)	1031
BarI	GAAGNNNNNNTAC	2 cut(s)	829, 861
Bbv12I	GWGCWC	2 cut(s)	64, 430
BbvCI	CCTCAGC	1 cut(s)	372
BbvI	GCAGC	4 cut(s)	643, 761, 826, 1264
BccI	CCATC	4 cut(s)	589, 1192, 1245, 1415
BceAI	ACGGC	1 cut(s)	44
BclI	TGATCA	2 cut(s)	1065, 1465
BcnI	CCSGG	3 cut(s)	133, 134, 315
BcoDI	GTCTC	1 cut(s)	1302
BfaI	CTAG	4 cut(s)	147, 335, 575, 584
BfmI	CTRYAG	1 cut(s)	253
BglII	AGATCT	1 cut(s)	1087
BisI	GCNGC	8 cut(s)	84, 87, 250, 657, 750, 815, 1121, 1278
BlnI	CCTAGG	1 cut(s)	146
BlsI	GCNGC	8 cut(s)	85, 88, 251, 658, 751, 816, 1122, 1279
Bme1390I	CCNGG	3 cut(s)	133, 134, 315
BmeT110I	CYCGRG	1 cut(s)	132
BmgBI	CACGTC	1 cut(s)	1312
BmgT120I	GGNCC	1 cut(s)	135
BmiI	GGNNCC	1 cut(s)	299
BmrFI	CCNGG	3 cut(s)	133, 134, 315
BmsI	GCATC	2 cut(s)	280, 1138
BpmI	CTGGAG	2 cut(s)	200, 251
Bpu10I	CCTNAGC	2 cut(s)	372, 800
Bpu14I	TTCGAA	1 cut(s)	1048
BpuMI	CCSGG	3 cut(s)	133, 134, 315
BsaHI	GRCGYC	1 cut(s)	705
BsaJI	CCNNGG	4 cut(s)	26, 84, 132, 146
BsaWI	WCCGGW	1 cut(s)	1175
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	1 cut(s)	48
Bse1I	ACTGG	2 cut(s)	301, 734
BseDI	CCNNGG	4 cut(s)	26, 84, 132, 146
BseGI	GGATG	3 cut(s)	288, 1153, 1256
BseLI	CCNNNNNNNGG	1 cut(s)	48
BseMII	CTCAG	6 cut(s)	363, 395, 462, 566, 657, 990
BseNI	ACTGG	2 cut(s)	301, 734
BseRI	GAGGAG	2 cut(s)	82, 848
BseSI	GKGCMC	1 cut(s)	64
BseXI	GCAGC	4 cut(s)	643, 761, 826, 1264
BseYI	CCCAGC	1 cut(s)	979
Bsh1236I	CGCG	1 cut(s)	86
BshFI	GGCC	5 cut(s)	83, 89, 137, 360, 1031
BsiHKAI	GWGCWC	2 cut(s)	64, 430
BsiHKCI	CYCGRG	1 cut(s)	132
BsiSI	CCGG	4 cut(s)	133, 138, 314, 1176
BslI	CCNNNNNNNGG	1 cut(s)	48
BsmAI	GTCTC	1 cut(s)	1302
BsmBI	CGTCTC	1 cut(s)	1302
BsnI	GGCC	5 cut(s)	83, 89, 137, 360, 1031
BsoBI	CYCGRG	1 cut(s)	132
Bsp119I	TTCGAA	1 cut(s)	1048
Bsp1286I	GDGCHC	2 cut(s)	64, 430
Bsp1407I	TGTACA	1 cut(s)	117
BspACI	CCGC	6 cut(s)	84, 86, 250, 326, 1120, 1134
BspANI	GGCC	5 cut(s)	83, 89, 137, 360, 1031
BspCNI	CTCAG	6 cut(s)	364, 396, 463, 565, 658, 991
BspFNI	CGCG	1 cut(s)	86
BspLI	GGNNCC	1 cut(s)	299
BspPI	GGATC	3 cut(s)	134, 523, 704
BspT104I	TTCGAA	1 cut(s)	1048
BsrBI	CCGCTC	1 cut(s)	1134
BsrGI	TGTACA	1 cut(s)	117
BsrI	ACTGG	2 cut(s)	301, 734
BssECI	CCNNGG	4 cut(s)	26, 84, 132, 146
BssNI	GRCGYC	1 cut(s)	705
BssT1I	CCWWGG	1 cut(s)	146
Bst4CI	ACNGT	2 cut(s)	66, 623
Bst6I	CTCTTC	2 cut(s)	1122, 1411
BstACI	GRCGYC	1 cut(s)	705
BstAUI	TGTACA	1 cut(s)	117
BstBI	TTCGAA	1 cut(s)	1048
BstC8I	GCNNGC	2 cut(s)	772, 1153
BstDEI	CTNAG	9 cut(s)	372, 404, 471, 552, 666, 800, 962, 999, 1521
BstDSI	CCRYGG	2 cut(s)	26, 84
BstF5I	GGATG	3 cut(s)	288, 1153, 1256
BstFNI	CGCG	1 cut(s)	86
BstMAI	GTCTC	1 cut(s)	1302
BstMWI	GCNNNNNNNGC	5 cut(s)	255, 530, 811, 1235, 1244
BstSCI	CCNGG	3 cut(s)	131, 132, 313
BstSFI	CTRYAG	1 cut(s)	253
BstSLI	GKGCMC	1 cut(s)	64
BstUI	CGCG	1 cut(s)	86
BstV1I	GCAGC	4 cut(s)	643, 761, 826, 1264
BstX2I	RGATCY	2 cut(s)	126, 1087
BstYI	RGATCY	2 cut(s)	126, 1087
BsuRI	GGCC	5 cut(s)	83, 89, 137, 360, 1031
BtgI	CCRYGG	2 cut(s)	26, 84
BtrI	CACGTC	1 cut(s)	1312
BtsCI	GGATG	3 cut(s)	288, 1153, 1256
BtsI	GCAGTG	2 cut(s)	1068, 1215
BtsIMutI	CAGTG	4 cut(s)	62, 182, 1068, 1215
Cac8I	GCNNGC	2 cut(s)	772, 1153
Cfr13I	GGNCC	1 cut(s)	135
Cfr42I	CCGCGG	1 cut(s)	87
Cfr9I	CCCGGG	1 cut(s)	132
CseI	GACGC	1 cut(s)	713
Csp6I	GTAC	4 cut(s)	118, 161, 379, 1075
CviAII	CATG	2 cut(s)	356, 566
CviQI	GTAC	4 cut(s)	118, 161, 379, 1075
DdeI	CTNAG	9 cut(s)	372, 404, 471, 552, 666, 800, 962, 999, 1521
DraIII	CACNNNGTG	1 cut(s)	32
EaeI	YGGCCR	1 cut(s)	1029
Eam1104I	CTCTTC	2 cut(s)	1122, 1411
EarI	CTCTTC	2 cut(s)	1122, 1411
Eco130I	CCWWGG	1 cut(s)	146
Eco32I	GATATC	1 cut(s)	1181
Eco57I	CTGAAG	2 cut(s)	444, 870
Eco88I	CYCGRG	1 cut(s)	132
EcoRI	GAATTC	2 cut(s)	646, 1050
EcoRV	GATATC	1 cut(s)	1181
EcoT14I	CCWWGG	1 cut(s)	146
ErhI	CCWWGG	1 cut(s)	146
Esp3I	CGTCTC	1 cut(s)	1302
FaeI	CATG	2 cut(s)	359, 569
FatI	CATG	2 cut(s)	355, 565
FauNDI	CATATG	2 cut(s)	1185, 1510
FbaI	TGATCA	2 cut(s)	1065, 1465
FblI	GTMKAC	1 cut(s)	726
Fnu4HI	GCNGC	8 cut(s)	84, 87, 250, 657, 750, 815, 1121, 1278
FokI	GGATG	3 cut(s)	295, 1160, 1263
Fsp4HI	GCNGC	8 cut(s)	84, 87, 250, 657, 750, 815, 1121, 1278
FspBI	CTAG	4 cut(s)	147, 335, 575, 584
GluI	GCNGC	8 cut(s)	84, 87, 250, 657, 750, 815, 1121, 1278
GsaI	CCCAGC	1 cut(s)	983
GsuI	CTGGAG	2 cut(s)	200, 251
HaeIII	GGCC	5 cut(s)	83, 89, 137, 360, 1031
HapII	CCGG	4 cut(s)	133, 138, 314, 1176
HgaI	GACGC	1 cut(s)	713
Hin1I	GRCGYC	1 cut(s)	705
Hin1II	CATG	2 cut(s)	359, 569
HincII	GTYRAC	1 cut(s)	1455
HindII	GTYRAC	1 cut(s)	1455
HindIII	AAGCTT	2 cut(s)	8, 686
HinfI	GANTC	5 cut(s)	166, 637, 1022, 1162, 1517
HpaII	CCGG	4 cut(s)	133, 138, 314, 1176
HphI	GGTGA	2 cut(s)	995, 1415
Hpy166II	GTNNAC	5 cut(s)	62, 563, 727, 1406, 1455
Hpy188I	TCNGA	7 cut(s)	277, 463, 555, 667, 811, 850, 1197
Hpy188III	TCNNGA	7 cut(s)	202, 217, 268, 484, 763, 1286, 1335
Hpy8I	GTNNAC	5 cut(s)	62, 563, 727, 1406, 1455
HpyAV	CCTTC	5 cut(s)	182, 505, 778, 1093, 1297
HpyCH4III	ACNGT	2 cut(s)	66, 623
HpyCH4IV	ACGT	1 cut(s)	1311
HpyCH4V	TGCA	5 cut(s)	62, 293, 749, 1080, 1151
HpyF10VI	GCNNNNNNNGC	5 cut(s)	255, 530, 811, 1235, 1244
HpyF3I	CTNAG	9 cut(s)	372, 404, 471, 552, 666, 800, 962, 999, 1521
HpySE526I	ACGT	1 cut(s)	1311
Hsp92I	GRCGYC	1 cut(s)	705
Hsp92II	CATG	2 cut(s)	359, 569
Ksp22I	TGATCA	2 cut(s)	1065, 1465
KspI	CCGCGG	1 cut(s)	87
LmnI	GCTCC	1 cut(s)	1141
Lsp1109I	GCAGC	4 cut(s)	643, 761, 826, 1264
LweI	GCATC	2 cut(s)	280, 1138
MaeI	CTAG	4 cut(s)	147, 335, 575, 584
MaeII	ACGT	1 cut(s)	1311
MaeIII	GTNAC	1 cut(s)	983
MbiI	CCGCTC	1 cut(s)	1134
MboII	GAAGA	9 cut(s)	197, 450, 499, 611, 646, 709, 1139, 1428, 1511
MflI	RGATCY	2 cut(s)	126, 1087
MhlI	GDGCHC	2 cut(s)	64, 430
MlsI	TGGCCA	1 cut(s)	1031
MluCI	AATT	8 cut(s)	75, 646, 839, 940, 1050, 1341, 1382, 1540
MluNI	TGGCCA	1 cut(s)	1031
MlyI	GAGTC	1 cut(s)	1156
MnlI	CCTC	8 cut(s)	100, 103, 367, 554, 866, 869, 886, 1006
Mox20I	TGGCCA	1 cut(s)	1031
MscI	TGGCCA	1 cut(s)	1031
MseI	TTAA	4 cut(s)	6, 78, 692, 1340
MslI	CAYNNNNRTG	1 cut(s)	1188
Msp20I	TGGCCA	1 cut(s)	1031
MspA1I	CMGCKG	2 cut(s)	86, 1367
MspI	CCGG	4 cut(s)	133, 138, 314, 1176
MspR9I	CCNGG	3 cut(s)	133, 134, 315
MvnI	CGCG	1 cut(s)	86
MwoI	GCNNNNNNNGC	5 cut(s)	255, 530, 811, 1235, 1244
NciI	CCSGG	3 cut(s)	133, 134, 315
NdeI	CATATG	2 cut(s)	1185, 1510
NlaIII	CATG	2 cut(s)	359, 569
NlaIV	GGNNCC	1 cut(s)	299
NmuCI	GTSAC	1 cut(s)	983
NspV	TTCGAA	1 cut(s)	1048
PfeI	GAWTC	4 cut(s)	166, 637, 1022, 1517
PfoI	TCCNGGA	1 cut(s)	313
PkrI	GCNGC	8 cut(s)	85, 88, 251, 658, 751, 816, 1122, 1279
PleI	GAGTC	1 cut(s)	1156
PpsI	GAGTC	1 cut(s)	1156
PshBI	ATTAAT	1 cut(s)	1340
PsiI	TTATAA	1 cut(s)	528
PspFI	CCCAGC	1 cut(s)	979
PspN4I	GGNNCC	1 cut(s)	299
PspPI	GGNCC	1 cut(s)	135
PsrI	GAACNNNNNNTAC	2 cut(s)	949, 981
PsuI	RGATCY	2 cut(s)	126, 1087
PvuII	CAGCTG	1 cut(s)	1367
RsaI	GTAC	4 cut(s)	119, 162, 380, 1076
RsaNI	GTAC	4 cut(s)	118, 161, 379, 1075
RseI	CAYNNNNRTG	1 cut(s)	1188
SacII	CCGCGG	1 cut(s)	87
SaqAI	TTAA	4 cut(s)	6, 78, 692, 1340
SatI	GCNGC	8 cut(s)	84, 87, 250, 657, 750, 815, 1121, 1278
Sau96I	GGNCC	1 cut(s)	135
SchI	GAGTC	1 cut(s)	1156
ScrFI	CCNGG	3 cut(s)	133, 134, 315
SduI	GDGCHC	2 cut(s)	64, 430
SfaNI	GCATC	2 cut(s)	280, 1138
SfcI	CTRYAG	1 cut(s)	253
Sfr303I	CCGCGG	1 cut(s)	87
SfuI	TTCGAA	1 cut(s)	1048
SgrBI	CCGCGG	1 cut(s)	87
SmaI	CCCGGG	1 cut(s)	134
SmiMI	CAYNNNNRTG	1 cut(s)	1188
Sse9I	AATT	8 cut(s)	75, 646, 839, 940, 1050, 1341, 1382, 1540
SsiI	CCGC	6 cut(s)	84, 86, 250, 326, 1120, 1134
SspI	AATATT	2 cut(s)	913, 1233
SspMI	CTAG	4 cut(s)	147, 335, 575, 584
StyD4I	CCNGG	3 cut(s)	131, 132, 313
StyI	CCWWGG	1 cut(s)	146
TaaI	ACNGT	2 cut(s)	66, 623
TaiI	ACGT	1 cut(s)	1314
TaqI	TCGA	4 cut(s)	483, 1048, 1243, 1334
TasI	AATT	8 cut(s)	75, 646, 839, 940, 1050, 1341, 1382, 1540
TatI	WGTACW	1 cut(s)	117
TauI	GCSGC	4 cut(s)	86, 89, 252, 1123
TfiI	GAWTC	4 cut(s)	166, 637, 1022, 1517
Tru1I	TTAA	4 cut(s)	6, 78, 692, 1340
Tru9I	TTAA	4 cut(s)	6, 78, 692, 1340
TscAI	CASTG	4 cut(s)	69, 182, 1075, 1215
TseFI	GTSAC	1 cut(s)	983
TseI	GCWGC	4 cut(s)	656, 749, 814, 1277
Tsp45I	GTSAC	1 cut(s)	983
TspGWI	ACGGA	3 cut(s)	145, 227, 310
TspMI	CCCGGG	1 cut(s)	132
TspRI	CASTG	4 cut(s)	69, 182, 1075, 1215
VneI	GTGCAC	1 cut(s)	60
VspI	ATTAAT	1 cut(s)	1340
XapI	RAATTY	3 cut(s)	646, 839, 1050
XmaI	CCCGGG	1 cut(s)	132
XmaJI	CCTAGG	1 cut(s)	146
XmiI	GTMKAC	1 cut(s)	726
XspI	CTAG	4 cut(s)	147, 335, 575, 584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.