Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 174 - 219 | 1.4e-06 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 528 |
| AatII | GACGTC | 1 cut(s) | 201 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 32 |
| AccBSI | CCGCTC | 1 cut(s) | 1134 |
| AccI | GTMKAC | 2 cut(s) | 726, 1243 |
| AciI | CCGC | 4 cut(s) | 250, 326, 1120, 1134 |
| AclWI | GGATC | 3 cut(s) | 523, 704, 1525 |
| AcoI | YGGCCR | 1 cut(s) | 1029 |
| AcsI | RAATTY | 3 cut(s) | 646, 839, 1050 |
| AcuI | CTGAAG | 1 cut(s) | 444 |
| AcyI | GRCGYC | 1 cut(s) | 198 |
| AfaI | GTAC | 5 cut(s) | 119, 162, 380, 1076, 1487 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 32, 48 |
| AjiI | CACGTC | 1 cut(s) | 1312 |
| AjnI | CCWGG | 3 cut(s) | 132, 313, 1246 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1076, 1108 |
| Alw21I | GWGCWC | 3 cut(s) | 64, 216, 430 |
| Alw26I | GTCTC | 4 cut(s) | 189, 312, 1302, 1454 |
| AlwI | GGATC | 3 cut(s) | 523, 704, 1525 |
| Ama87I | CYCGRG | 2 cut(s) | 57, 1521 |
| AoxI | GGCC | 5 cut(s) | 81, 87, 135, 358, 1029 |
| ApeKI | GCWGC | 2 cut(s) | 656, 749 |
| ApoI | RAATTY | 3 cut(s) | 646, 839, 1050 |
| AseI | ATTAAT | 1 cut(s) | 1340 |
| AsuHPI | GGTGA | 2 cut(s) | 995, 1415 |
| AvaI | CYCGRG | 2 cut(s) | 57, 1521 |
| BalI | TGGCCA | 1 cut(s) | 1031 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| BbsI | GAAGAC | 1 cut(s) | 847 |
| Bbv12I | GWGCWC | 3 cut(s) | 64, 216, 430 |
| BbvCI | CCTCAGC | 1 cut(s) | 372 |
| BbvI | GCAGC | 2 cut(s) | 668, 761 |
| BccI | CCATC | 4 cut(s) | 589, 1184, 1192, 1508 |
| BceAI | ACGGC | 1 cut(s) | 102 |
| BciT130I | CCWGG | 3 cut(s) | 134, 315, 1248 |
| BciVI | GTATCC | 1 cut(s) | 1207 |
| BclI | TGATCA | 2 cut(s) | 1065, 1465 |
| BcoDI | GTCTC | 4 cut(s) | 189, 312, 1302, 1454 |
| BfaI | CTAG | 1 cut(s) | 335 |
| BfmI | CTRYAG | 1 cut(s) | 253 |
| BfuI | GTATCC | 1 cut(s) | 1207 |
| BisI | GCNGC | 4 cut(s) | 250, 657, 750, 1121 |
| BlsI | GCNGC | 4 cut(s) | 251, 658, 751, 1122 |
| Bme1390I | CCNGG | 3 cut(s) | 134, 315, 1248 |
| BmeT110I | CYCGRG | 2 cut(s) | 57, 1521 |
| BmgBI | CACGTC | 1 cut(s) | 1312 |
| BmrFI | CCNGG | 3 cut(s) | 134, 315, 1248 |
| BmsI | GCATC | 3 cut(s) | 280, 399, 1138 |
| BpiI | GAAGAC | 1 cut(s) | 847 |
| BpmI | CTGGAG | 3 cut(s) | 200, 251, 297 |
| Bpu10I | CCTNAGC | 2 cut(s) | 372, 800 |
| BsaHI | GRCGYC | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 4 cut(s) | 84, 132, 146, 1272 |
| BsaWI | WCCGGW | 1 cut(s) | 1175 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 32, 48 |
| Bse1I | ACTGG | 3 cut(s) | 301, 734, 1405 |
| Bse3DI | GCAATG | 1 cut(s) | 321 |
| BseBI | CCWGG | 3 cut(s) | 134, 315, 1248 |
| BseDI | CCNNGG | 4 cut(s) | 84, 132, 146, 1272 |
| BseGI | GGATG | 4 cut(s) | 288, 390, 1153, 1195 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 32, 48 |
| BseMI | GCAATG | 1 cut(s) | 321 |
| BseMII | CTCAG | 6 cut(s) | 363, 395, 462, 566, 657, 990 |
| BseNI | ACTGG | 3 cut(s) | 301, 734, 1405 |
| BseRI | GAGGAG | 1 cut(s) | 82 |
| BseXI | GCAGC | 2 cut(s) | 668, 761 |
| BseYI | CCCAGC | 1 cut(s) | 979 |
| BshFI | GGCC | 5 cut(s) | 83, 89, 137, 360, 1031 |
| BsiHKAI | GWGCWC | 3 cut(s) | 64, 216, 430 |
| BsiHKCI | CYCGRG | 2 cut(s) | 57, 1521 |
| BsiSI | CCGG | 2 cut(s) | 138, 1176 |
| BsiWI | CGTACG | 1 cut(s) | 1485 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 32, 48 |
| BsmAI | GTCTC | 4 cut(s) | 189, 312, 1302, 1454 |
| BsmBI | CGTCTC | 2 cut(s) | 189, 1302 |
| BsnI | GGCC | 5 cut(s) | 83, 89, 137, 360, 1031 |
| BsoBI | CYCGRG | 2 cut(s) | 57, 1521 |
| Bsp1286I | GDGCHC | 3 cut(s) | 64, 216, 430 |
| Bsp143I | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| BspACI | CCGC | 4 cut(s) | 250, 326, 1120, 1134 |
| BspANI | GGCC | 5 cut(s) | 83, 89, 137, 360, 1031 |
| BspCNI | CTCAG | 6 cut(s) | 364, 396, 463, 565, 658, 991 |
| BspPI | GGATC | 3 cut(s) | 523, 704, 1525 |
| BsrBI | CCGCTC | 1 cut(s) | 1134 |
| BsrDI | GCAATG | 1 cut(s) | 321 |
| BsrI | ACTGG | 3 cut(s) | 301, 734, 1405 |
| BssECI | CCNNGG | 4 cut(s) | 84, 132, 146, 1272 |
| BssMI | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| BssNI | GRCGYC | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 1 cut(s) | 1272 |
| Bst2UI | CCWGG | 3 cut(s) | 134, 315, 1248 |
| Bst4CI | ACNGT | 2 cut(s) | 66, 623 |
| Bst6I | CTCTTC | 2 cut(s) | 1122, 1452 |
| BstACI | GRCGYC | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 1 cut(s) | 772 |
| BstDEI | CTNAG | 8 cut(s) | 372, 404, 471, 552, 666, 800, 962, 999 |
| BstDSI | CCRYGG | 1 cut(s) | 84 |
| BstF5I | GGATG | 4 cut(s) | 288, 390, 1153, 1195 |
| BstKTI | GATC | 7 cut(s) | 345, 518, 712, 809, 1068, 1468, 1520 |
| BstMAI | GTCTC | 4 cut(s) | 189, 312, 1302, 1454 |
| BstMBI | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 255, 811 |
| BstNI | CCWGG | 3 cut(s) | 134, 315, 1248 |
| BstNSI | RCATGY | 1 cut(s) | 1284 |
| BstSCI | CCNGG | 3 cut(s) | 132, 313, 1246 |
| BstSFI | CTRYAG | 1 cut(s) | 253 |
| BstV1I | GCAGC | 2 cut(s) | 668, 761 |
| BstV2I | GAAGAC | 1 cut(s) | 847 |
| BstX2I | RGATCY | 1 cut(s) | 1517 |
| BstYI | RGATCY | 1 cut(s) | 1517 |
| BsuI | GTATCC | 1 cut(s) | 1207 |
| BsuRI | GGCC | 5 cut(s) | 83, 89, 137, 360, 1031 |
| BtgI | CCRYGG | 1 cut(s) | 84 |
| BtgZI | GCGATG | 1 cut(s) | 230 |
| BtrI | CACGTC | 1 cut(s) | 1312 |
| BtsCI | GGATG | 4 cut(s) | 288, 390, 1153, 1195 |
| BtsI | GCAGTG | 3 cut(s) | 870, 1068, 1215 |
| BtsIMutI | CAGTG | 5 cut(s) | 62, 182, 870, 1068, 1215 |
| Cac8I | GCNNGC | 1 cut(s) | 772 |
| Csp6I | GTAC | 5 cut(s) | 118, 161, 379, 1075, 1486 |
| CviAII | CATG | 4 cut(s) | 27, 566, 1158, 1281 |
| CviQI | GTAC | 5 cut(s) | 118, 161, 379, 1075, 1486 |
| DdeI | CTNAG | 8 cut(s) | 372, 404, 471, 552, 666, 800, 962, 999 |
| DpnI | GATC | 7 cut(s) | 344, 517, 711, 808, 1067, 1467, 1519 |
| DpnII | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| EaeI | YGGCCR | 1 cut(s) | 1029 |
| Eam1104I | CTCTTC | 2 cut(s) | 1122, 1452 |
| EarI | CTCTTC | 2 cut(s) | 1122, 1452 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 1 cut(s) | 1272 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco32I | GATATC | 1 cut(s) | 1181 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 1 cut(s) | 444 |
| Eco88I | CYCGRG | 2 cut(s) | 57, 1521 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoRI | GAATTC | 2 cut(s) | 646, 1050 |
| EcoRII | CCWGG | 3 cut(s) | 132, 313, 1246 |
| EcoRV | GATATC | 1 cut(s) | 1181 |
| EcoT14I | CCWWGG | 1 cut(s) | 1272 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| ErhI | CCWWGG | 1 cut(s) | 1272 |
| Esp3I | CGTCTC | 2 cut(s) | 189, 1302 |
| FaeI | CATG | 4 cut(s) | 30, 569, 1161, 1284 |
| FatI | CATG | 4 cut(s) | 26, 565, 1157, 1280 |
| FauNDI | CATATG | 4 cut(s) | 652, 847, 1185, 1510 |
| FbaI | TGATCA | 2 cut(s) | 1065, 1465 |
| FblI | GTMKAC | 2 cut(s) | 726, 1243 |
| Fnu4HI | GCNGC | 4 cut(s) | 250, 657, 750, 1121 |
| FokI | GGATG | 4 cut(s) | 295, 377, 1160, 1202 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 4 cut(s) | 250, 657, 750, 1121 |
| FspBI | CTAG | 1 cut(s) | 335 |
| GluI | GCNGC | 4 cut(s) | 250, 657, 750, 1121 |
| GsaI | CCCAGC | 1 cut(s) | 983 |
| GsuI | CTGGAG | 3 cut(s) | 200, 251, 297 |
| HaeIII | GGCC | 5 cut(s) | 83, 89, 137, 360, 1031 |
| HapII | CCGG | 2 cut(s) | 138, 1176 |
| Hin1I | GRCGYC | 1 cut(s) | 198 |
| Hin1II | CATG | 4 cut(s) | 30, 569, 1161, 1284 |
| HincII | GTYRAC | 1 cut(s) | 1244 |
| HindII | GTYRAC | 1 cut(s) | 1244 |
| HindIII | AAGCTT | 2 cut(s) | 8, 572 |
| HinfI | GANTC | 5 cut(s) | 166, 637, 1022, 1162, 1481 |
| HpaII | CCGG | 2 cut(s) | 138, 1176 |
| HphI | GGTGA | 2 cut(s) | 995, 1415 |
| Hpy166II | GTNNAC | 5 cut(s) | 242, 563, 727, 1244, 1406 |
| Hpy188I | TCNGA | 7 cut(s) | 147, 277, 463, 555, 667, 811, 1197 |
| Hpy188III | TCNNGA | 7 cut(s) | 57, 202, 217, 268, 484, 763, 1286 |
| Hpy8I | GTNNAC | 5 cut(s) | 242, 563, 727, 1244, 1406 |
| HpyAV | CCTTC | 4 cut(s) | 182, 679, 778, 1297 |
| HpyCH4III | ACNGT | 2 cut(s) | 66, 623 |
| HpyCH4IV | ACGT | 3 cut(s) | 120, 198, 1311 |
| HpyCH4V | TGCA | 7 cut(s) | 293, 656, 749, 845, 1080, 1151, 1280 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 255, 811 |
| HpyF3I | CTNAG | 8 cut(s) | 372, 404, 471, 552, 666, 800, 962, 999 |
| HpySE526I | ACGT | 3 cut(s) | 120, 198, 1311 |
| Hsp92I | GRCGYC | 1 cut(s) | 198 |
| Hsp92II | CATG | 4 cut(s) | 30, 569, 1161, 1284 |
| Ksp22I | TGATCA | 2 cut(s) | 1065, 1465 |
| Kzo9I | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| LmnI | GCTCC | 3 cut(s) | 211, 219, 1141 |
| Lsp1109I | GCAGC | 2 cut(s) | 668, 761 |
| LweI | GCATC | 3 cut(s) | 280, 399, 1138 |
| MaeI | CTAG | 1 cut(s) | 335 |
| MaeII | ACGT | 3 cut(s) | 120, 198, 1311 |
| MaeIII | GTNAC | 2 cut(s) | 983, 1396 |
| MalI | GATC | 7 cut(s) | 344, 517, 711, 808, 1067, 1467, 1519 |
| MbiI | CCGCTC | 1 cut(s) | 1134 |
| MboI | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| MfeI | CAATTG | 2 cut(s) | 75, 641 |
| MflI | RGATCY | 1 cut(s) | 1517 |
| MhlI | GDGCHC | 3 cut(s) | 64, 216, 430 |
| MlsI | TGGCCA | 1 cut(s) | 1031 |
| MluNI | TGGCCA | 1 cut(s) | 1031 |
| MlyI | GAGTC | 1 cut(s) | 1156 |
| MmeI | TCCRAC | 1 cut(s) | 660 |
| Mox20I | TGGCCA | 1 cut(s) | 1031 |
| MscI | TGGCCA | 1 cut(s) | 1031 |
| MseI | TTAA | 5 cut(s) | 6, 384, 692, 974, 1340 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1188 |
| Msp20I | TGGCCA | 1 cut(s) | 1031 |
| MspA1I | CMGCKG | 1 cut(s) | 1367 |
| MspI | CCGG | 2 cut(s) | 138, 1176 |
| MspR9I | CCNGG | 3 cut(s) | 134, 315, 1248 |
| MunI | CAATTG | 2 cut(s) | 75, 641 |
| MvaI | CCWGG | 3 cut(s) | 134, 315, 1248 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 255, 811 |
| NdeI | CATATG | 4 cut(s) | 652, 847, 1185, 1510 |
| NdeII | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| NlaIII | CATG | 4 cut(s) | 30, 569, 1161, 1284 |
| NmuCI | GTSAC | 1 cut(s) | 983 |
| NspI | RCATGY | 1 cut(s) | 1284 |
| PaeR7I | CTCGAG | 1 cut(s) | 57 |
| PfeI | GAWTC | 4 cut(s) | 166, 637, 1022, 1481 |
| Pfl23II | CGTACG | 1 cut(s) | 1485 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 32 |
| PfoI | TCCNGGA | 1 cut(s) | 313 |
| PkrI | GCNGC | 4 cut(s) | 251, 658, 751, 1122 |
| PleI | GAGTC | 1 cut(s) | 1156 |
| PpsI | GAGTC | 1 cut(s) | 1156 |
| PshBI | ATTAAT | 1 cut(s) | 1340 |
| PsiI | TTATAA | 1 cut(s) | 528 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| Psp6I | CCWGG | 3 cut(s) | 132, 313, 1246 |
| PspFI | CCCAGC | 1 cut(s) | 979 |
| PspGI | CCWGG | 3 cut(s) | 132, 313, 1246 |
| PspLI | CGTACG | 1 cut(s) | 1485 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 949, 981 |
| PsuI | RGATCY | 1 cut(s) | 1517 |
| PvuII | CAGCTG | 1 cut(s) | 1367 |
| RsaI | GTAC | 5 cut(s) | 119, 162, 380, 1076, 1487 |
| RsaNI | GTAC | 5 cut(s) | 118, 161, 379, 1075, 1486 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1188 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SalI | GTCGAC | 1 cut(s) | 1242 |
| SaqAI | TTAA | 5 cut(s) | 6, 384, 692, 974, 1340 |
| SatI | GCNGC | 4 cut(s) | 250, 657, 750, 1121 |
| Sau3AI | GATC | 7 cut(s) | 342, 515, 709, 806, 1065, 1465, 1517 |
| SchI | GAGTC | 1 cut(s) | 1156 |
| ScrFI | CCNGG | 3 cut(s) | 134, 315, 1248 |
| SduI | GDGCHC | 3 cut(s) | 64, 216, 430 |
| SfaNI | GCATC | 3 cut(s) | 280, 399, 1138 |
| SfcI | CTRYAG | 1 cut(s) | 253 |
| Sfr274I | CTCGAG | 1 cut(s) | 57 |
| SlaI | CTCGAG | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1188 |
| SmlI | CTYRAG | 1 cut(s) | 57 |
| SmoI | CTYRAG | 1 cut(s) | 57 |
| SsiI | CCGC | 4 cut(s) | 250, 326, 1120, 1134 |
| SspI | AATATT | 1 cut(s) | 1233 |
| SspMI | CTAG | 1 cut(s) | 335 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| StyD4I | CCNGG | 3 cut(s) | 132, 313, 1246 |
| StyI | CCWWGG | 1 cut(s) | 1272 |
| TaaI | ACNGT | 2 cut(s) | 66, 623 |
| TaiI | ACGT | 3 cut(s) | 123, 201, 1314 |
| TaqI | TCGA | 4 cut(s) | 58, 183, 483, 1243 |
| TauI | GCSGC | 2 cut(s) | 252, 1123 |
| TfiI | GAWTC | 4 cut(s) | 166, 637, 1022, 1481 |
| Tru1I | TTAA | 5 cut(s) | 6, 384, 692, 974, 1340 |
| Tru9I | TTAA | 5 cut(s) | 6, 384, 692, 974, 1340 |
| TscAI | CASTG | 5 cut(s) | 69, 182, 877, 1075, 1215 |
| TseFI | GTSAC | 1 cut(s) | 983 |
| TseI | GCWGC | 2 cut(s) | 656, 749 |
| Tsp45I | GTSAC | 1 cut(s) | 983 |
| TspDTI | ATGAA | 8 cut(s) | 214, 506, 582, 639, 710, 864, 957, 1235 |
| TspGWI | ACGGA | 2 cut(s) | 227, 1267 |
| TspRI | CASTG | 5 cut(s) | 69, 182, 877, 1075, 1215 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 32 |
| VspI | ATTAAT | 1 cut(s) | 1340 |
| XapI | RAATTY | 3 cut(s) | 646, 839, 1050 |
| XceI | RCATGY | 1 cut(s) | 1284 |
| XhoI | CTCGAG | 1 cut(s) | 57 |
| XmiI | GTMKAC | 2 cut(s) | 726, 1243 |
| XspI | CTAG | 1 cut(s) | 335 |
| ZraI | GACGTC | 1 cut(s) | 199 |