Rh3CG242000

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000378
Physical Location & Seq
Reverse (-)
23164286 .. 23166634
2349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG242000.1

Sequence Viewer

Length: 1512 bp
ATGATGAAGTACTCTCATTTCAGCTCCCTATTCAACACTCTCCGAAACGCACCACGTCACGTTTCGCTGTACTCAACGGCGGCACCCAAATCTCATCGCAAGTTCTGGAAAGGCTCGCTGAACGGCCTCTACCGTCAGATCTCCCGGAGCGATCCTAAGGCCTCCGTATTACCCATTCTTGACCGGTGGGTCCAAAATAGTCGAACCGTAGATAAAGATGACCTCGTCACTATCATCAAGGAGCTCAGGTACTACAAAGACTACAGCCAAGCTCTTGAGGTGTCCATGTGGATGAGTGACAAAAGGTATGTTGAACTTTTGCCCTCTGACGTAGCCATCCGGCTCGACTTGATCGCAAAAGTTCATGGAATAGAACAAGCTGAGAATTATTTTAACAACACTCCCAAACAATTGAAAGTCCTTGAGGTTTACAGTGCTCTCCTCAACTGCTATGCCCATGCAAAACAGTTGGAAAAAGCAGAGGCCACCATGCAGAAGATGAGGGATTTGGGGTTCTCTAGGACGTCATTGTCATACAATGTTTTGCTCAATTTGTATTATAAGACTGGACACCGTGCAAAATTTGACAGTCTGATGAGTGAAATGGAAGAGAATGGCATCGGTTTTGACAGATTCACATATGGGATCAGACTCAGTGCAGCTGCAGCTGCTTCTGATCTCGAGGGAATTGACAAGATTCTGGCAGAATGGGAATCCGATCCTAAGAGTCTTTTGGACTGGATTAATTATGCCGTTGCAGCAAACGGTTATACAAAAGCAGGAGCTGTGGACAAGGCTTTAGCAATGCTAAAGAGATCTGAGGAACAGATACCAAGTTCTAAAAGACAAAGAGGAGCATATCAGTACCTTATGACACAATATGCAGTTCTAGGGAAGAAAGATGATACTTTGAGACTATGGAAATGTTACAAGGAGCAGATGAAAGTATACAATAGGGGTTATATATGCATAATGACCTCACTCTCGAAGTTTGATGACATTGAGAATGCAGAGAAGATCTTTGAAGAGTGGGAATCTGAGCATGCAAATTATGATATTCGTATCCCAAATACCTTGATTGGTGCTTATACCAGGAATGGTTTTCTTGACAAGGCTGAAGCCATTATGAGCAGGATAAGATTGAAGGATGAGAAACCTAATCCTACGGCATGGAATTATTTGGCGAAAGGGTATCTTGATCACGGTCAAATTGAGAAGGTACTTGAATCAGCAACAAAAGCAGTTTCTGCTGCGCAGCCAGGGTGGATGCCGGACAAGGATGTTGTGGTCGCATGTCTGGAATACTTCAAAAGTAAAGCAGATCTGGAAGGAGCCGAGGAATTTATAAAACTCCTCGGGGATAAGAATATTATTCCCGTAAATATGCAGGAGAGATTGTTGAATCATATCAAAAATGAGAATTCAACTGCTGAAATAGGTGAAATGGAATGGGATTGTCCAAATGGGGATGAAGAAACAAGTGAACTTACAGATGTGGAATCAGCGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

503

Amino Acids

57.6

Weight (kDa)

6.09

Isoelectric Point (pI)

33.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 176 - 219 2.8e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000378)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20710 AT2G20710 AT2G20720
fragaria_vesca FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 561, 1346
AasI GACNNNNNNGTC 2 cut(s) 188, 529
AatII GACGTC 1 cut(s) 527
Acc16I TGCGCA 1 cut(s) 1254
AccB1I GGYRCC 1 cut(s) 82
AccI GTMKAC 1 cut(s) 948
AciI CCGC 1 cut(s) 80
AclWI GGATC 3 cut(s) 146, 653, 713
AcsI RAATTY 3 cut(s) 581, 1340, 1420
AcuI CTGAAG 1 cut(s) 1137
AcyI GRCGYC 1 cut(s) 524
AfaI GTAC 5 cut(s) 11, 71, 251, 866, 1221
AgeI ACCGGT 1 cut(s) 183
AgsI TTSAA 9 cut(s) 34, 314, 415, 1025, 1144, 1226, 1309, 1402, 1425
AjiI CACGTC 1 cut(s) 56
AjnI CCWGG 2 cut(s) 1091, 1258
AloI GAACNNNNNNTCC 2 cut(s) 497, 529
AluBI AGCT 7 cut(s) 24, 244, 272, 380, 662, 668, 785
AluI AGCT 7 cut(s) 24, 244, 272, 380, 662, 668, 785
Alw21I GWGCWC 2 cut(s) 246, 439
Alw26I GTCTC 1 cut(s) 907
AlwI GGATC 3 cut(s) 146, 653, 713
AlwNI CAGNNNCTG 2 cut(s) 785, 1247
Ama87I CYCGRG 2 cut(s) 680, 1355
AoxI GGCC 3 cut(s) 124, 159, 483
ApeKI GCWGC 7 cut(s) 659, 662, 665, 668, 758, 1250, 1255
ApoI RAATTY 3 cut(s) 581, 1340, 1420
AseI ATTAAT 1 cut(s) 744
AsiGI ACCGGT 1 cut(s) 183
AspLEI GCGC 2 cut(s) 1255, 1507
AspS9I GGNCC 1 cut(s) 190
AsuC2I CCSGG 1 cut(s) 145
AsuHPI GGTGA 1 cut(s) 1451
AvaI CYCGRG 2 cut(s) 680, 1355
AvaII GGWCC 1 cut(s) 190
AxyI CCTNAGG 1 cut(s) 156
BanI GGYRCC 1 cut(s) 82
BanII GRGCYC 1 cut(s) 246
Bbv12I GWGCWC 2 cut(s) 246, 439
BbvI GCAGC 7 cut(s) 649, 655, 671, 677, 770, 1237, 1267
BccI CCATC 1 cut(s) 344
BceAI ACGGC 4 cut(s) 93, 139, 737, 1182
BciT130I CCWGG 2 cut(s) 1093, 1260
BciVI GTATCC 1 cut(s) 1073
BclI TGATCA 1 cut(s) 1198
BcnI CCSGG 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 907
BfaI CTAG 2 cut(s) 519, 890
BfmI CTRYAG 2 cut(s) 262, 663
BfuI GTATCC 1 cut(s) 1073
BglII AGATCT 4 cut(s) 138, 815, 1017, 1321
BisI GCNGC 8 cut(s) 81, 660, 663, 666, 669, 759, 1251, 1256
BlsI GCNGC 8 cut(s) 82, 661, 664, 667, 670, 760, 1252, 1257
BmcAI AGTACT 1 cut(s) 11
Bme1390I CCNGG 3 cut(s) 145, 1093, 1260
Bme18I GGWCC 1 cut(s) 190
BmeT110I CYCGRG 2 cut(s) 680, 1355
BmgBI CACGTC 1 cut(s) 56
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 3 cut(s) 84, 191, 1333
BmrFI CCNGG 3 cut(s) 145, 1093, 1260
BmsI GCATC 2 cut(s) 627, 1257
Bpu10I CCTNAGC 1 cut(s) 245
BpuEI CTTGAG 2 cut(s) 296, 443
BpuMI CCSGG 1 cut(s) 145
BsaHI GRCGYC 1 cut(s) 524
BsaJI CCNNGG 3 cut(s) 1259, 1335, 1354
BsaWI WCCGGW 1 cut(s) 183
BsaXI ACNNNNNCTCC 4 cut(s) 233, 263, 1382, 1412
Bse118I RCCGGY 1 cut(s) 183
Bse1I ACTGG 2 cut(s) 571, 743
Bse21I CCTNAGG 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 810
BseBI CCWGG 2 cut(s) 1093, 1260
BseDI CCNNGG 3 cut(s) 1259, 1335, 1354
BseGI GGATG 6 cut(s) 297, 336, 1153, 1272, 1285, 1474
BseMI GCAATG 1 cut(s) 810
BseMII CTCAG 5 cut(s) 259, 372, 667, 810, 1029
BseNI ACTGG 2 cut(s) 571, 743
BseRI GAGGAG 3 cut(s) 431, 867, 1343
BseXI GCAGC 7 cut(s) 649, 655, 671, 677, 770, 1237, 1267
BsgI GTGCAG 1 cut(s) 678
BshFI GGCC 3 cut(s) 126, 161, 485
BshNI GGYRCC 1 cut(s) 82
BshTI ACCGGT 1 cut(s) 183
BsiHKAI GWGCWC 2 cut(s) 246, 439
BsiHKCI CYCGRG 2 cut(s) 680, 1355
BsiSI CCGG 4 cut(s) 145, 184, 340, 1271
BsmAI GTCTC 1 cut(s) 907
BsmI GAATGC 1 cut(s) 1012
BsnI GGCC 3 cut(s) 126, 161, 485
BsoBI CYCGRG 2 cut(s) 680, 1355
Bsp1286I GDGCHC 2 cut(s) 246, 439
BspACI CCGC 1 cut(s) 80
BspANI GGCC 3 cut(s) 126, 161, 485
BspCNI CTCAG 5 cut(s) 258, 373, 666, 811, 1030
BspLI GGNNCC 3 cut(s) 84, 191, 1333
BspMAI CTGCAG 1 cut(s) 667
BspPI GGATC 3 cut(s) 146, 653, 713
BspT107I GGYRCC 1 cut(s) 82
BsrDI GCAATG 1 cut(s) 810
BsrFI RCCGGY 1 cut(s) 183
BsrI ACTGG 2 cut(s) 571, 743
BssAI RCCGGY 1 cut(s) 183
BssECI CCNNGG 3 cut(s) 1259, 1335, 1354
BssNAI GTATAC 1 cut(s) 949
BssNI GRCGYC 1 cut(s) 524
Bst1107I GTATAC 1 cut(s) 949
Bst2UI CCWGG 2 cut(s) 1093, 1260
Bst4CI ACNGT 8 cut(s) 134, 208, 434, 468, 575, 590, 767, 1205
Bst6I CTCTTC 2 cut(s) 603, 1020
BstACI GRCGYC 1 cut(s) 524
BstAPI GCANNNNNTGC 1 cut(s) 1247
BstC8I GCNNGC 2 cut(s) 116, 1044
BstDEI CTNAG 7 cut(s) 156, 245, 381, 653, 723, 819, 1038
BstF5I GGATG 6 cut(s) 297, 336, 1153, 1272, 1285, 1474
BstHHI GCGC 2 cut(s) 1255, 1507
BstMAI GTCTC 1 cut(s) 907
BstMWI GCNNNNNNNGC 5 cut(s) 665, 668, 758, 1238, 1247
BstNI CCWGG 2 cut(s) 1093, 1260
BstNSI RCATGY 2 cut(s) 1046, 1296
BstSCI CCNGG 3 cut(s) 143, 1091, 1258
BstSFI CTRYAG 2 cut(s) 262, 663
BstV1I GCAGC 7 cut(s) 649, 655, 671, 677, 770, 1237, 1267
BstX2I RGATCY 4 cut(s) 138, 815, 1017, 1321
BstYI RGATCY 4 cut(s) 138, 815, 1017, 1321
BstZ17I GTATAC 1 cut(s) 949
Bsu36I CCTNAGG 1 cut(s) 156
BsuI GTATCC 1 cut(s) 1073
BsuRI GGCC 3 cut(s) 126, 161, 485
BtgZI GCGATG 1 cut(s) 80
BtrI CACGTC 1 cut(s) 56
BtsCI GGATG 6 cut(s) 297, 336, 1153, 1272, 1285, 1474
BtsIMutI CAGTG 2 cut(s) 439, 661
Cac8I GCNNGC 2 cut(s) 116, 1044
CaiI CAGNNNCTG 2 cut(s) 785, 1247
CfoI GCGC 2 cut(s) 1255, 1507
Cfr10I RCCGGY 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 190
Csp6I GTAC 5 cut(s) 10, 70, 250, 865, 1220
CspAI ACCGGT 1 cut(s) 183
CviAII CATG 7 cut(s) 286, 365, 458, 490, 1043, 1170, 1293
CviQI GTAC 5 cut(s) 10, 70, 250, 865, 1220
DdeI CTNAG 7 cut(s) 156, 245, 381, 653, 723, 819, 1038
DrdI GACNNNNNNGTC 2 cut(s) 188, 529
DseDI GACNNNNNNGTC 2 cut(s) 188, 529
Eam1104I CTCTTC 2 cut(s) 603, 1020
EarI CTCTTC 2 cut(s) 603, 1020
Ecl136II GAGCTC 1 cut(s) 244
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 190
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 1137
Eco81I CCTNAGG 1 cut(s) 156
Eco88I CYCGRG 2 cut(s) 680, 1355
EcoICRI GAGCTC 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 1420
EcoRII CCWGG 2 cut(s) 1091, 1258
EcoT22I ATGCAT 1 cut(s) 971
EcoT38I GRGCYC 1 cut(s) 246
FaeI CATG 7 cut(s) 289, 368, 461, 493, 1046, 1173, 1296
FalI AAGNNNNNCTT 2 cut(s) 1179, 1211
FatI CATG 7 cut(s) 285, 364, 457, 489, 1042, 1169, 1292
FauNDI CATATG 1 cut(s) 640
FbaI TGATCA 1 cut(s) 1198
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 8 cut(s) 81, 660, 663, 666, 669, 759, 1251, 1256
FokI GGATG 6 cut(s) 304, 323, 1160, 1279, 1292, 1481
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 8 cut(s) 81, 660, 663, 666, 669, 759, 1251, 1256
FspBI CTAG 2 cut(s) 519, 890
FspI TGCGCA 1 cut(s) 1254
GlaI GCGC 2 cut(s) 1254, 1506
GluI GCNGC 8 cut(s) 81, 660, 663, 666, 669, 759, 1251, 1256
HaeIII GGCC 3 cut(s) 126, 161, 485
HapII CCGG 4 cut(s) 145, 184, 340, 1271
HhaI GCGC 2 cut(s) 1255, 1507
Hin1I GRCGYC 1 cut(s) 524
Hin1II CATG 7 cut(s) 289, 368, 461, 493, 1046, 1173, 1296
Hin6I GCGC 2 cut(s) 1253, 1505
HinP1I GCGC 2 cut(s) 1253, 1505
HinfI GANTC 9 cut(s) 633, 651, 697, 713, 727, 1034, 1226, 1402, 1499
HpaII CCGG 4 cut(s) 145, 184, 340, 1271
HphI GGTGA 1 cut(s) 1451
Hpy166II GTNNAC 4 cut(s) 430, 790, 949, 1484
Hpy188I TCNGA 9 cut(s) 44, 138, 328, 594, 650, 676, 718, 820, 1039
Hpy188III TCNNGA 9 cut(s) 106, 179, 275, 680, 985, 1106, 1196, 1298, 1325
Hpy8I GTNNAC 4 cut(s) 430, 790, 949, 1484
HpyAV CCTTC 3 cut(s) 1138, 1210, 1322
HpyCH4III ACNGT 8 cut(s) 134, 208, 434, 468, 575, 590, 767, 1205
HpyCH4IV ACGT 4 cut(s) 55, 60, 330, 524
HpyF10VI GCNNNNNNNGC 5 cut(s) 665, 668, 758, 1238, 1247
HpyF3I CTNAG 7 cut(s) 156, 245, 381, 653, 723, 819, 1038
HpySE526I ACGT 4 cut(s) 55, 60, 330, 524
Hsp92I GRCGYC 1 cut(s) 524
Hsp92II CATG 7 cut(s) 289, 368, 461, 493, 1046, 1173, 1296
HspAI GCGC 2 cut(s) 1253, 1505
Ksp22I TGATCA 1 cut(s) 1198
LmnI GCTCC 7 cut(s) 29, 147, 241, 782, 854, 934, 1331
Lsp1109I GCAGC 7 cut(s) 649, 655, 671, 677, 770, 1237, 1267
LweI GCATC 2 cut(s) 627, 1257
MaeI CTAG 2 cut(s) 519, 890
MaeII ACGT 4 cut(s) 55, 60, 330, 524
MaeIII GTNAC 4 cut(s) 56, 226, 296, 926
MboII GAAGA 6 cut(s) 508, 620, 907, 1027, 1037, 1484
MfeI CAATTG 1 cut(s) 410
MflI RGATCY 4 cut(s) 138, 815, 1017, 1321
MhlI GDGCHC 2 cut(s) 246, 439
MlyI GAGTC 2 cut(s) 645, 736
MmeI TCCRAC 1 cut(s) 450
Mph1103I ATGCAT 1 cut(s) 971
MseI TTAA 2 cut(s) 393, 744
MslI CAYNNNNRTG 1 cut(s) 290
MspA1I CMGCKG 2 cut(s) 662, 668
MspI CCGG 4 cut(s) 145, 184, 340, 1271
MspR9I CCNGG 3 cut(s) 145, 1093, 1260
MunI CAATTG 1 cut(s) 410
Mva1269I GAATGC 1 cut(s) 1012
MvaI CCWGG 2 cut(s) 1093, 1260
MwoI GCNNNNNNNGC 5 cut(s) 665, 668, 758, 1238, 1247
NciI CCSGG 1 cut(s) 145
NdeI CATATG 1 cut(s) 640
NlaIII CATG 7 cut(s) 289, 368, 461, 493, 1046, 1173, 1296
NlaIV GGNNCC 3 cut(s) 84, 191, 1333
NmeAIII GCCGAG 1 cut(s) 1360
NmuCI GTSAC 3 cut(s) 56, 226, 296
NsbI TGCGCA 1 cut(s) 1254
NsiI ATGCAT 1 cut(s) 971
NspI RCATGY 2 cut(s) 1046, 1296
PaeI GCATGC 1 cut(s) 1046
PaeR7I CTCGAG 1 cut(s) 680
PceI AGGCCT 1 cut(s) 161
PctI GAATGC 1 cut(s) 1012
PfeI GAWTC 7 cut(s) 633, 697, 713, 1034, 1226, 1402, 1499
PflFI GACNNNGTC 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 143
PinAI ACCGGT 1 cut(s) 183
PkrI GCNGC 8 cut(s) 82, 661, 664, 667, 670, 760, 1252, 1257
PleI GAGTC 2 cut(s) 645, 735
PpsI GAGTC 2 cut(s) 645, 735
PshBI ATTAAT 1 cut(s) 744
PsiI TTATAA 2 cut(s) 561, 1346
Psp124BI GAGCTC 1 cut(s) 246
Psp6I CCWGG 2 cut(s) 1091, 1258
PspGI CCWGG 2 cut(s) 1091, 1258
PspN4I GGNNCC 3 cut(s) 84, 191, 1333
PspPI GGNCC 1 cut(s) 190
PsrI GAACNNNNNNTAC 2 cut(s) 113, 145
PstI CTGCAG 1 cut(s) 667
PstNI CAGNNNCTG 2 cut(s) 785, 1247
PsuI RGATCY 4 cut(s) 138, 815, 1017, 1321
PsyI GACNNNGTC 1 cut(s) 224
PvuII CAGCTG 2 cut(s) 662, 668
RsaI GTAC 5 cut(s) 11, 71, 251, 866, 1221
RsaNI GTAC 5 cut(s) 10, 70, 250, 865, 1220
RseI CAYNNNNRTG 1 cut(s) 290
SacI GAGCTC 1 cut(s) 246
SaqAI TTAA 2 cut(s) 393, 744
SatI GCNGC 8 cut(s) 81, 660, 663, 666, 669, 759, 1251, 1256
Sau96I GGNCC 1 cut(s) 190
ScaI AGTACT 1 cut(s) 11
SchI GAGTC 2 cut(s) 645, 736
ScrFI CCNGG 3 cut(s) 145, 1093, 1260
SduI GDGCHC 2 cut(s) 246, 439
SfaNI GCATC 2 cut(s) 627, 1257
SfcI CTRYAG 2 cut(s) 262, 663
Sfr274I CTCGAG 1 cut(s) 680
SinI GGWCC 1 cut(s) 190
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 1 cut(s) 290
SmlI CTYRAG 3 cut(s) 275, 422, 680
SmoI CTYRAG 3 cut(s) 275, 422, 680
SphI GCATGC 1 cut(s) 1046
SseBI AGGCCT 1 cut(s) 161
SsiI CCGC 1 cut(s) 80
SspI AATATT 1 cut(s) 1369
SspMI CTAG 2 cut(s) 519, 890
SstI GAGCTC 1 cut(s) 246
StuI AGGCCT 1 cut(s) 161
StyD4I CCNGG 3 cut(s) 143, 1091, 1258
TaaI ACNGT 8 cut(s) 134, 208, 434, 468, 575, 590, 767, 1205
TaiI ACGT 4 cut(s) 58, 63, 333, 527
TaqI TCGA 4 cut(s) 202, 345, 681, 986
TatI WGTACW 2 cut(s) 9, 69
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 7 cut(s) 633, 697, 713, 1034, 1226, 1402, 1499
Tru1I TTAA 2 cut(s) 393, 744
Tru9I TTAA 2 cut(s) 393, 744
TscAI CASTG 2 cut(s) 439, 661
TseFI GTSAC 3 cut(s) 56, 226, 296
TseI GCWGC 7 cut(s) 659, 662, 665, 668, 758, 1250, 1255
Tsp45I GTSAC 3 cut(s) 56, 226, 296
TspDTI ATGAA 4 cut(s) 20, 353, 956, 1485
TspGWI ACGGA 1 cut(s) 154
TspRI CASTG 2 cut(s) 439, 661
Tth111I GACNNNGTC 1 cut(s) 224
VpaK11BI GGWCC 1 cut(s) 190
VspI ATTAAT 1 cut(s) 744
XapI RAATTY 3 cut(s) 581, 1340, 1420
XceI RCATGY 2 cut(s) 1046, 1296
XhoI CTCGAG 1 cut(s) 680
XmiI GTMKAC 1 cut(s) 948
XspI CTAG 2 cut(s) 519, 890
ZraI GACGTC 1 cut(s) 525
ZrmI AGTACT 1 cut(s) 11
Zsp2I ATGCAT 1 cut(s) 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.