RchiOBHm_Chr3g0477861

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000378
Physical Location & Seq
Reverse (-)
23759403 .. 23762294
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44312

Sequence Viewer

Length: 1548 bp
ATGGGAGATCCTCCCCCTCTCCCATATTTTGCTCTAAATTTGAAGAGTACAAGGTTTAAACCCTTTTGTGTATCAACAAATCCCAAGGACTTAATCCCCTGTGTCAATTTCTTGCGACTCCCAACTTCGCCGATCAAGATGATGAAGCACTCACATTTCAGCGCCCTATTCAACACTCTCTACTCCCGCTTCTGTCACGTTTCGCTGTACTCAACGGCGGTGCCCAAATCTCATCGGAAGCTCTGGAAAGTCTCGCTGAACACCCTCTACCGTCGGATCTGCGGGAGCGAATTTCAGGCCTCCGTTTTACCGATTCTCGACCGGTGGGTCCAAGAAGGCCAAACTGTAGATAGAGATGAGCTCGTCACTATCATCAAGGAGCTCAGGTACTACAAAGACTACGGCCGAGCTCTTGAGGTGTCCATGTGGATGAGTGACAAAAGGTACGCCGTACTTTTTCCCTCTGACGTAGCCATCCGGCTCGACTTGATTGCAAAAGTTCATGGAATAGAAGAAGCTGAGATTTATTTTAACAACACTCCTAAACAATTGAAAGTCCTTCAGGTTTACCATGCTCTCCTCAACTGCTATGCTCGTGCAAAACAGTTGGAAAAGGCAGAGGCCACCATGCAGAAGATGAGGGATTTGGGGTTCTGTAGGACGTCATGGTCATACAATGATTTGCTCAATTTGTATTATAAGACTGGAAACCATGAGAAATTTGACAGTCTGATGAGTGAAATGGAAGAGAATGGCATCGGTTTTGACAGATTCACATATGGGATCAGACTCAGTGCAGCTGCAGCTGCTTCTGATCTCGAGGGAATTGACAAGATTCTGGCAGAATGGGAATCCGATCCTAAGATTCTTGTGGACTGGACTAATTATGCCATTGCAGCAAATGGTTATACAAAAGCAGGAGCTGTGGACAAGGCTTTAGAAATGCTAAAGAGATCTGAGGAACATGTACCAAATTCTAAAAGACAGAGGCCAGCATATGAGCACCTTATGACACAATATGCAGTACTAGGGAAGAAAGACGATACTTTGAGACTATGGAAATGTTACAAGGAGCAGATGAAAGTATACAGCAGGGGTTATATATGCGTAATGACCTCACTCTTGAATTCTGATGATATTGAGACTGCTGAGAAGATCTTTGAAGAGTGGGAATCTGAGCCTGTAAATTATGATATTCGTATCCCAAATACCTTGATTGGTGCTTATACCAGGAATGGTTTTCTTGACAAGGCTGAAGCAATTCTCAGCAGGATAAGATTGAAAGATGGGAAACCTAATCATACGACATTGATTTATTTGGCGAAGGGTTATCTTGATCAAGGTCAAATTGAGAAGGCACTTGAATTGGCAACAAAAGCAGTTTGTGCTGCGCCACCAGGGTGGATGCCGAACAAGGATGTTGTGGTCGCATGTCTGGAAAAGTTCAAAATGAAAGCAGATCTGGAAGGAGCCAAGGAATTCATAAAACTCGTTGTGGATAAGAATATGCAGGAGAGATTGTTGAATCATATCGAAAATGAGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

515

Amino Acids

59.3

Weight (kDa)

8.44

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 224 - 265 2.5e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000378)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20710 AT2G20710 AT2G20720
fragaria_vesca FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
AasI GACNNNNNNGTC 2 cut(s) 326, 667
AatII GACGTC 1 cut(s) 665
AccB1I GGYRCC 1 cut(s) 220
AccI GTMKAC 1 cut(s) 1086
AciI CCGC 3 cut(s) 187, 218, 282
AclWI GGATC 4 cut(s) 2, 284, 791, 851
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 6 cut(s) 37, 290, 719, 973, 1126, 1478
AcuI CTGAAG 2 cut(s) 545, 1275
AcyI GRCGYC 1 cut(s) 662
AfaI GTAC 7 cut(s) 49, 209, 389, 446, 453, 969, 1026
AflIII ACRYGT 1 cut(s) 964
AgeI ACCGGT 1 cut(s) 321
AgsI TTSAA 9 cut(s) 43, 172, 553, 1126, 1163, 1282, 1364, 1447, 1525
AjnI CCWGG 2 cut(s) 1229, 1396
AleI CACNNNNGTG 1 cut(s) 1399
AloI GAACNNNNNNTCC 2 cut(s) 635, 667
AluBI AGCT 8 cut(s) 241, 361, 382, 410, 518, 800, 806, 923
AluI AGCT 8 cut(s) 241, 361, 382, 410, 518, 800, 806, 923
Alw21I GWGCWC 4 cut(s) 363, 384, 412, 1005
Alw26I GTCTC 3 cut(s) 256, 1045, 1136
AlwI GGATC 4 cut(s) 2, 284, 791, 851
AlwNI CAGNNNCTG 1 cut(s) 923
Ama87I CYCGRG 1 cut(s) 818
AoxI GGCC 5 cut(s) 297, 337, 403, 621, 989
ApeKI GCWGC 6 cut(s) 797, 800, 803, 806, 896, 1388
ApoI RAATTY 6 cut(s) 37, 290, 719, 973, 1126, 1478
AsiGI ACCGGT 1 cut(s) 321
Asp700I GAANNNNTTC 1 cut(s) 1260
AspLEI GCGC 2 cut(s) 164, 1393
AspS9I GGNCC 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 818
AvaII GGWCC 1 cut(s) 328
BaeGI GKGCMC 1 cut(s) 225
BanI GGYRCC 1 cut(s) 220
BanII GRGCYC 3 cut(s) 363, 384, 412
BauI CACGAG 1 cut(s) 594
Bbv12I GWGCWC 4 cut(s) 363, 384, 412, 1005
BbvI GCAGC 6 cut(s) 787, 793, 809, 815, 908, 1375
BccI CCATC 2 cut(s) 482, 1280
BceAI ACGGC 3 cut(s) 231, 418, 434
BcgI CGANNNNNNTGC 2 cut(s) 473, 507
BciT130I CCWGG 2 cut(s) 1231, 1398
BciVI GTATCC 1 cut(s) 1211
BclI TGATCA 1 cut(s) 1336
BcoDI GTCTC 3 cut(s) 256, 1045, 1136
BfaI CTAG 1 cut(s) 1028
BfmI CTRYAG 3 cut(s) 345, 655, 801
BfoI RGCGCY 1 cut(s) 165
BfuI GTATCC 1 cut(s) 1211
BglII AGATCT 3 cut(s) 953, 1155, 1459
BisI GCNGC 6 cut(s) 798, 801, 804, 807, 897, 1389
BlsI GCNGC 6 cut(s) 799, 802, 805, 808, 898, 1390
BmcAI AGTACT 1 cut(s) 1026
Bme1390I CCNGG 2 cut(s) 1231, 1398
Bme18I GGWCC 1 cut(s) 328
BmeT110I CYCGRG 1 cut(s) 818
BmgT120I GGNCC 1 cut(s) 328
BmiI GGNNCC 3 cut(s) 222, 329, 1471
BmrFI CCNGG 2 cut(s) 1231, 1398
BmsI GCATC 2 cut(s) 765, 1395
BplI GAGNNNNNCTC 2 cut(s) 345, 377
Bpu10I CCTNAGC 1 cut(s) 383
BpuEI CTTGAG 1 cut(s) 434
BsaHI GRCGYC 1 cut(s) 662
BsaJI CCNNGG 3 cut(s) 84, 1397, 1473
BsaWI WCCGGW 1 cut(s) 321
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 1505, 1535
Bse118I RCCGGY 1 cut(s) 321
Bse1I ACTGG 2 cut(s) 709, 881
Bse3DI GCAATG 1 cut(s) 891
BseBI CCWGG 2 cut(s) 1231, 1398
BseDI CCNNGG 3 cut(s) 84, 1397, 1473
BseGI GGATG 4 cut(s) 435, 474, 1410, 1423
BseMI GCAATG 1 cut(s) 891
BseMII CTCAG 7 cut(s) 397, 510, 805, 948, 1140, 1167, 1279
BseNI ACTGG 2 cut(s) 709, 881
BseRI GAGGAG 1 cut(s) 569
BseSI GKGCMC 1 cut(s) 225
BseX3I CGGCCG 1 cut(s) 403
BseXI GCAGC 6 cut(s) 787, 793, 809, 815, 908, 1375
BsgI GTGCAG 1 cut(s) 816
Bsh1285I CGRYCG 2 cut(s) 322, 406
BshFI GGCC 5 cut(s) 299, 339, 405, 623, 991
BshNI GGYRCC 1 cut(s) 220
BshTI ACCGGT 1 cut(s) 321
BsiEI CGRYCG 2 cut(s) 322, 406
BsiHKAI GWGCWC 4 cut(s) 363, 384, 412, 1005
BsiHKCI CYCGRG 1 cut(s) 818
BsiSI CCGG 2 cut(s) 322, 478
BsmAI GTCTC 3 cut(s) 256, 1045, 1136
BsnI GGCC 5 cut(s) 299, 339, 405, 623, 991
BsoBI CYCGRG 1 cut(s) 818
Bsp1286I GDGCHC 5 cut(s) 225, 363, 384, 412, 1005
BspACI CCGC 3 cut(s) 187, 218, 282
BspANI GGCC 5 cut(s) 299, 339, 405, 623, 991
BspCNI CTCAG 7 cut(s) 396, 511, 804, 949, 1141, 1168, 1278
BspLI GGNNCC 3 cut(s) 222, 329, 1471
BspMAI CTGCAG 1 cut(s) 805
BspPI GGATC 4 cut(s) 2, 284, 791, 851
BspT107I GGYRCC 1 cut(s) 220
BsrDI GCAATG 1 cut(s) 891
BsrFI RCCGGY 1 cut(s) 321
BsrI ACTGG 2 cut(s) 709, 881
BssAI RCCGGY 1 cut(s) 321
BssECI CCNNGG 3 cut(s) 84, 1397, 1473
BssNAI GTATAC 1 cut(s) 1087
BssNI GRCGYC 1 cut(s) 662
BssSI CACGAG 1 cut(s) 594
BssT1I CCWWGG 2 cut(s) 84, 1473
Bst1107I GTATAC 1 cut(s) 1087
Bst2BI CACGAG 1 cut(s) 594
Bst2UI CCWGG 2 cut(s) 1231, 1398
Bst4CI ACNGT 4 cut(s) 272, 346, 606, 728
Bst6I CTCTTC 3 cut(s) 38, 741, 1158
BstACI GRCGYC 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 1385
BstC8I GCNNGC 1 cut(s) 993
BstDEI CTNAG 8 cut(s) 383, 519, 791, 861, 957, 1149, 1176, 1265
BstF5I GGATG 4 cut(s) 435, 474, 1410, 1423
BstH2I RGCGCY 1 cut(s) 165
BstHHI GCGC 2 cut(s) 164, 1393
BstMAI GTCTC 3 cut(s) 256, 1045, 1136
BstMCI CGRYCG 2 cut(s) 322, 406
BstMWI GCNNNNNNNGC 5 cut(s) 803, 806, 896, 1376, 1385
BstNI CCWGG 2 cut(s) 1231, 1398
BstNSI RCATGY 2 cut(s) 968, 1434
BstSCI CCNGG 2 cut(s) 1229, 1396
BstSFI CTRYAG 3 cut(s) 345, 655, 801
BstSLI GKGCMC 1 cut(s) 225
BstV1I GCAGC 6 cut(s) 787, 793, 809, 815, 908, 1375
BstX2I RGATCY 5 cut(s) 7, 276, 953, 1155, 1459
BstXI CCANNNNNNTGG 1 cut(s) 1401
BstYI RGATCY 5 cut(s) 7, 276, 953, 1155, 1459
BstZ17I GTATAC 1 cut(s) 1087
BstZI CGGCCG 1 cut(s) 403
BsuI GTATCC 1 cut(s) 1211
BsuRI GGCC 5 cut(s) 299, 339, 405, 623, 991
BtsCI GGATG 4 cut(s) 435, 474, 1410, 1423
BtsIMutI CAGTG 1 cut(s) 799
Cac8I GCNNGC 1 cut(s) 993
CaiI CAGNNNCTG 1 cut(s) 923
CfoI GCGC 2 cut(s) 164, 1393
Cfr10I RCCGGY 1 cut(s) 321
Cfr13I GGNCC 1 cut(s) 328
Csp6I GTAC 7 cut(s) 48, 208, 388, 445, 452, 968, 1025
CspAI ACCGGT 1 cut(s) 321
CviAII CATG 8 cut(s) 424, 503, 572, 628, 666, 713, 965, 1431
CviQI GTAC 7 cut(s) 48, 208, 388, 445, 452, 968, 1025
DdeI CTNAG 8 cut(s) 383, 519, 791, 861, 957, 1149, 1176, 1265
DraI TTTAAA 1 cut(s) 58
DrdI GACNNNNNNGTC 2 cut(s) 326, 667
DseDI GACNNNNNNGTC 2 cut(s) 326, 667
EaeI YGGCCR 1 cut(s) 403
EagI CGGCCG 1 cut(s) 403
Eam1104I CTCTTC 3 cut(s) 38, 741, 1158
EarI CTCTTC 3 cut(s) 38, 741, 1158
Ecl136II GAGCTC 3 cut(s) 361, 382, 410
EclXI CGGCCG 1 cut(s) 403
Eco130I CCWWGG 2 cut(s) 84, 1473
Eco147I AGGCCT 1 cut(s) 299
Eco24I GRGCYC 3 cut(s) 363, 384, 412
Eco47I GGWCC 1 cut(s) 328
Eco52I CGGCCG 1 cut(s) 403
Eco53kI GAGCTC 3 cut(s) 361, 382, 410
Eco57I CTGAAG 2 cut(s) 545, 1275
Eco88I CYCGRG 1 cut(s) 818
EcoICRI GAGCTC 3 cut(s) 361, 382, 410
EcoRI GAATTC 2 cut(s) 1126, 1478
EcoRII CCWGG 2 cut(s) 1229, 1396
EcoT14I CCWWGG 2 cut(s) 84, 1473
EcoT38I GRGCYC 3 cut(s) 363, 384, 412
ErhI CCWWGG 2 cut(s) 84, 1473
FaeI CATG 8 cut(s) 427, 506, 575, 631, 669, 716, 968, 1434
FatI CATG 8 cut(s) 423, 502, 571, 627, 665, 712, 964, 1430
FauI CCCGC 2 cut(s) 194, 275
FauNDI CATATG 2 cut(s) 778, 997
FbaI TGATCA 1 cut(s) 1336
FblI GTMKAC 1 cut(s) 1086
Fnu4HI GCNGC 6 cut(s) 798, 801, 804, 807, 897, 1389
FokI GGATG 4 cut(s) 442, 461, 1417, 1430
FriOI GRGCYC 3 cut(s) 363, 384, 412
Fsp4HI GCNGC 6 cut(s) 798, 801, 804, 807, 897, 1389
FspBI CTAG 1 cut(s) 1028
GlaI GCGC 2 cut(s) 163, 1392
GluI GCNGC 6 cut(s) 798, 801, 804, 807, 897, 1389
HaeII RGCGCY 1 cut(s) 165
HaeIII GGCC 5 cut(s) 299, 339, 405, 623, 991
HapII CCGG 2 cut(s) 322, 478
HhaI GCGC 2 cut(s) 164, 1393
Hin1I GRCGYC 1 cut(s) 662
Hin1II CATG 8 cut(s) 427, 506, 575, 631, 669, 716, 968, 1434
Hin6I GCGC 2 cut(s) 162, 1391
HinP1I GCGC 2 cut(s) 162, 1391
HinfI GANTC 9 cut(s) 117, 313, 771, 789, 835, 851, 865, 1172, 1525
HpaII CCGG 2 cut(s) 322, 478
Hpy166II GTNNAC 4 cut(s) 568, 874, 928, 1087
Hpy8I GTNNAC 4 cut(s) 568, 874, 928, 1087
Hpy99I CGWCG 1 cut(s) 276
HpyAV CCTTC 5 cut(s) 329, 569, 1318, 1348, 1460
HpyCH4III ACNGT 4 cut(s) 272, 346, 606, 728
HpyCH4IV ACGT 3 cut(s) 198, 468, 662
HpyCH4V TGCA 8 cut(s) 494, 599, 631, 797, 803, 896, 1022, 1510
HpyF10VI GCNNNNNNNGC 5 cut(s) 803, 806, 896, 1376, 1385
HpyF3I CTNAG 8 cut(s) 383, 519, 791, 861, 957, 1149, 1176, 1265
HpySE526I ACGT 3 cut(s) 198, 468, 662
Hsp92I GRCGYC 1 cut(s) 662
Hsp92II CATG 8 cut(s) 427, 506, 575, 631, 669, 716, 968, 1434
HspAI GCGC 2 cut(s) 162, 1391
Ksp22I TGATCA 1 cut(s) 1336
LmnI GCTCC 5 cut(s) 285, 379, 920, 1072, 1469
Lsp1109I GCAGC 6 cut(s) 787, 793, 809, 815, 908, 1375
LweI GCATC 2 cut(s) 765, 1395
MaeI CTAG 1 cut(s) 1028
MaeII ACGT 3 cut(s) 198, 468, 662
MaeIII GTNAC 4 cut(s) 194, 364, 434, 1064
MboII GAAGA 7 cut(s) 55, 524, 646, 758, 1045, 1165, 1175
MfeI CAATTG 1 cut(s) 548
MflI RGATCY 5 cut(s) 7, 276, 953, 1155, 1459
MhlI GDGCHC 5 cut(s) 225, 363, 384, 412, 1005
MlyI GAGTC 2 cut(s) 111, 783
MmeI TCCRAC 2 cut(s) 254, 588
MroXI GAANNNNTTC 1 cut(s) 1260
MseI TTAA 3 cut(s) 57, 92, 531
MslI CAYNNNNRTG 2 cut(s) 428, 1399
MspA1I CMGCKG 2 cut(s) 800, 806
MspI CCGG 2 cut(s) 322, 478
MspR9I CCNGG 2 cut(s) 1231, 1398
MssI GTTTAAAC 1 cut(s) 58
MunI CAATTG 1 cut(s) 548
MvaI CCWGG 2 cut(s) 1231, 1398
MwoI GCNNNNNNNGC 5 cut(s) 803, 806, 896, 1376, 1385
NdeI CATATG 2 cut(s) 778, 997
NlaIII CATG 8 cut(s) 427, 506, 575, 631, 669, 716, 968, 1434
NlaIV GGNNCC 3 cut(s) 222, 329, 1471
NmeAIII GCCGAG 1 cut(s) 431
NmuCI GTSAC 3 cut(s) 194, 364, 434
NspI RCATGY 2 cut(s) 968, 1434
OliI CACNNNNGTG 1 cut(s) 1399
PaeR7I CTCGAG 1 cut(s) 818
PceI AGGCCT 1 cut(s) 299
PciI ACATGT 1 cut(s) 964
PdmI GAANNNNTTC 1 cut(s) 1260
PfeI GAWTC 7 cut(s) 313, 771, 835, 851, 865, 1172, 1525
PinAI ACCGGT 1 cut(s) 321
PkrI GCNGC 6 cut(s) 799, 802, 805, 808, 898, 1390
PleI GAGTC 2 cut(s) 111, 783
PmeI GTTTAAAC 1 cut(s) 58
PpsI GAGTC 2 cut(s) 111, 783
PscI ACATGT 1 cut(s) 964
PsiI TTATAA 1 cut(s) 699
Psp124BI GAGCTC 3 cut(s) 363, 384, 412
Psp6I CCWGG 2 cut(s) 1229, 1396
PspGI CCWGG 2 cut(s) 1229, 1396
PspN4I GGNNCC 3 cut(s) 222, 329, 1471
PspPI GGNCC 1 cut(s) 328
PsrI GAACNNNNNNTAC 2 cut(s) 251, 283
PstI CTGCAG 1 cut(s) 805
PstNI CAGNNNCTG 1 cut(s) 923
PsuI RGATCY 5 cut(s) 7, 276, 953, 1155, 1459
PvuII CAGCTG 2 cut(s) 800, 806
RsaI GTAC 7 cut(s) 49, 209, 389, 446, 453, 969, 1026
RsaNI GTAC 7 cut(s) 48, 208, 388, 445, 452, 968, 1025
RseI CAYNNNNRTG 2 cut(s) 428, 1399
SacI GAGCTC 3 cut(s) 363, 384, 412
SaqAI TTAA 3 cut(s) 57, 92, 531
SatI GCNGC 6 cut(s) 798, 801, 804, 807, 897, 1389
Sau96I GGNCC 1 cut(s) 328
ScaI AGTACT 1 cut(s) 1026
SchI GAGTC 2 cut(s) 111, 783
ScrFI CCNGG 2 cut(s) 1231, 1398
SduI GDGCHC 5 cut(s) 225, 363, 384, 412, 1005
SfaNI GCATC 2 cut(s) 765, 1395
SfcI CTRYAG 3 cut(s) 345, 655, 801
Sfr274I CTCGAG 1 cut(s) 818
SinI GGWCC 1 cut(s) 328
SlaI CTCGAG 1 cut(s) 818
SmiMI CAYNNNNRTG 2 cut(s) 428, 1399
SmlI CTYRAG 2 cut(s) 413, 818
SmoI CTYRAG 2 cut(s) 413, 818
SseBI AGGCCT 1 cut(s) 299
SsiI CCGC 3 cut(s) 187, 218, 282
SspMI CTAG 1 cut(s) 1028
SstI GAGCTC 3 cut(s) 363, 384, 412
StuI AGGCCT 1 cut(s) 299
StyD4I CCNGG 2 cut(s) 1229, 1396
StyI CCWWGG 2 cut(s) 84, 1473
TaaI ACNGT 4 cut(s) 272, 346, 606, 728
TaiI ACGT 3 cut(s) 201, 471, 665
TaqI TCGA 4 cut(s) 318, 483, 819, 1533
TatI WGTACW 3 cut(s) 47, 207, 1024
TfiI GAWTC 7 cut(s) 313, 771, 835, 851, 865, 1172, 1525
Tru1I TTAA 3 cut(s) 57, 92, 531
Tru9I TTAA 3 cut(s) 57, 92, 531
TscAI CASTG 1 cut(s) 799
TseFI GTSAC 3 cut(s) 194, 364, 434
TseI GCWGC 6 cut(s) 797, 800, 803, 806, 896, 1388
Tsp45I GTSAC 3 cut(s) 194, 364, 434
TspDTI ATGAA 5 cut(s) 158, 491, 1094, 1466, 1471
TspGWI ACGGA 1 cut(s) 292
TspRI CASTG 1 cut(s) 799
VpaK11BI GGWCC 1 cut(s) 328
XapI RAATTY 6 cut(s) 37, 290, 719, 973, 1126, 1478
XceI RCATGY 2 cut(s) 968, 1434
XhoI CTCGAG 1 cut(s) 818
XmiI GTMKAC 1 cut(s) 1086
XmnI GAANNNNTTC 1 cut(s) 1260
XspI CTAG 1 cut(s) 1028
ZraI GACGTC 1 cut(s) 663
ZrmI AGTACT 1 cut(s) 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.