Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 242 |
| AdeI | CACNNNGTG | 1 cut(s) | 201 |
| AfaI | GTAC | 1 cut(s) | 335 |
| AgsI | TTSAA | 3 cut(s) | 304, 312, 340 |
| AjnI | CCWGG | 2 cut(s) | 289, 453 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 119, 151 |
| AluBI | AGCT | 2 cut(s) | 49, 365 |
| AluI | AGCT | 2 cut(s) | 49, 365 |
| Alw21I | GWGCWC | 1 cut(s) | 487 |
| Alw26I | GTCTC | 3 cut(s) | 155, 416, 461 |
| AoxI | GGCC | 1 cut(s) | 144 |
| ApeKI | GCWGC | 2 cut(s) | 269, 320 |
| AspS9I | GGNCC | 1 cut(s) | 144 |
| AsuHPI | GGTGA | 1 cut(s) | 458 |
| Bbv12I | GWGCWC | 1 cut(s) | 487 |
| BbvI | GCAGC | 2 cut(s) | 281, 307 |
| BccI | CCATC | 1 cut(s) | 288 |
| BciT130I | CCWGG | 2 cut(s) | 291, 455 |
| BcoDI | GTCTC | 3 cut(s) | 155, 416, 461 |
| BisI | GCNGC | 2 cut(s) | 270, 321 |
| BlsI | GCNGC | 2 cut(s) | 271, 322 |
| Bme1390I | CCNGG | 2 cut(s) | 291, 455 |
| BmgT120I | GGNCC | 1 cut(s) | 144 |
| BmrFI | CCNGG | 2 cut(s) | 291, 455 |
| BmsI | GCATC | 1 cut(s) | 28 |
| BsaI | GGTCTC | 1 cut(s) | 416 |
| BsaJI | CCNNGG | 1 cut(s) | 453 |
| Bse3DI | GCAATG | 1 cut(s) | 11 |
| BseBI | CCWGG | 2 cut(s) | 291, 455 |
| BseDI | CCNNGG | 1 cut(s) | 453 |
| BseGI | GGATG | 2 cut(s) | 31, 299 |
| BseMI | GCAATG | 1 cut(s) | 11 |
| BseMII | CTCAG | 2 cut(s) | 33, 368 |
| BseXI | GCAGC | 2 cut(s) | 281, 307 |
| BshFI | GGCC | 1 cut(s) | 146 |
| BsiHKAI | GWGCWC | 1 cut(s) | 487 |
| BsmAI | GTCTC | 3 cut(s) | 155, 416, 461 |
| BsmBI | CGTCTC | 1 cut(s) | 155 |
| BsnI | GGCC | 1 cut(s) | 146 |
| Bso31I | GGTCTC | 1 cut(s) | 416 |
| Bsp1286I | GDGCHC | 1 cut(s) | 487 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 1 cut(s) | 146 |
| BspCNI | CTCAG | 2 cut(s) | 34, 369 |
| BspHI | TCATGA | 1 cut(s) | 367 |
| BspTNI | GGTCTC | 1 cut(s) | 416 |
| BsrDI | GCAATG | 1 cut(s) | 11 |
| BssECI | CCNNGG | 1 cut(s) | 453 |
| Bst2UI | CCWGG | 2 cut(s) | 291, 455 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 1 cut(s) | 168 |
| BstDEI | CTNAG | 2 cut(s) | 42, 377 |
| BstF5I | GGATG | 2 cut(s) | 31, 299 |
| BstMAI | GTCTC | 3 cut(s) | 155, 416, 461 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 254 |
| BstNI | CCWGG | 2 cut(s) | 291, 455 |
| BstNSI | RCATGY | 1 cut(s) | 327 |
| BstSCI | CCNGG | 2 cut(s) | 289, 453 |
| BstV1I | GCAGC | 2 cut(s) | 281, 307 |
| BsuRI | GGCC | 1 cut(s) | 146 |
| BtsCI | GGATG | 2 cut(s) | 31, 299 |
| Cac8I | GCNNGC | 1 cut(s) | 168 |
| CciI | TCATGA | 1 cut(s) | 367 |
| Cfr13I | GGNCC | 1 cut(s) | 144 |
| CseI | GACGC | 1 cut(s) | 172 |
| Csp6I | GTAC | 1 cut(s) | 334 |
| CviAII | CATG | 4 cut(s) | 198, 282, 324, 368 |
| CviJI | RGCY | 4 cut(s) | 49, 146, 320, 365 |
| CviKI_1 | RGCY | 4 cut(s) | 49, 146, 320, 365 |
| CviQI | GTAC | 1 cut(s) | 334 |
| DdeI | CTNAG | 2 cut(s) | 42, 377 |
| DraIII | CACNNNGTG | 1 cut(s) | 201 |
| EciI | GGCGGA | 1 cut(s) | 257 |
| Eco31I | GGTCTC | 1 cut(s) | 416 |
| EcoRII | CCWGG | 2 cut(s) | 289, 453 |
| Esp3I | CGTCTC | 1 cut(s) | 155 |
| FaeI | CATG | 4 cut(s) | 201, 285, 327, 371 |
| FaiI | YATR | 7 cut(s) | 199, 225, 283, 325, 369, 402, 404 |
| FatI | CATG | 4 cut(s) | 197, 281, 323, 367 |
| Fnu4HI | GCNGC | 2 cut(s) | 270, 321 |
| FokI | GGATG | 2 cut(s) | 38, 306 |
| Fsp4HI | GCNGC | 2 cut(s) | 270, 321 |
| GluI | GCNGC | 2 cut(s) | 270, 321 |
| HaeIII | GGCC | 1 cut(s) | 146 |
| HgaI | GACGC | 1 cut(s) | 172 |
| Hin1II | CATG | 4 cut(s) | 201, 285, 327, 371 |
| HincII | GTYRAC | 2 cut(s) | 112, 287 |
| HindII | GTYRAC | 2 cut(s) | 112, 287 |
| HindIII | AAGCTT | 1 cut(s) | 47 |
| HinfI | GANTC | 2 cut(s) | 65, 71 |
| HphI | GGTGA | 1 cut(s) | 458 |
| Hpy166II | GTNNAC | 4 cut(s) | 112, 287, 334, 383 |
| Hpy188I | TCNGA | 2 cut(s) | 70, 93 |
| Hpy188III | TCNNGA | 1 cut(s) | 368 |
| Hpy8I | GTNNAC | 4 cut(s) | 112, 287, 334, 383 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 4 cut(s) | 11, 123, 170, 323 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 254 |
| HpyF3I | CTNAG | 2 cut(s) | 42, 377 |
| Hsp92II | CATG | 4 cut(s) | 201, 285, 327, 371 |
| LmnI | GCTCC | 1 cut(s) | 482 |
| LpnPI | CCDG | 4 cut(s) | 276, 303, 440, 467 |
| Lsp1109I | GCAGC | 2 cut(s) | 281, 307 |
| LweI | GCATC | 1 cut(s) | 28 |
| MhlI | GDGCHC | 1 cut(s) | 487 |
| MluCI | AATT | 3 cut(s) | 258, 371, 411 |
| MmeI | TCCRAC | 1 cut(s) | 444 |
| MnlI | CCTC | 3 cut(s) | 135, 238, 291 |
| MseI | TTAA | 3 cut(s) | 261, 428, 441 |
| MslI | CAYNNNNRTG | 1 cut(s) | 490 |
| MspR9I | CCNGG | 2 cut(s) | 291, 455 |
| MvaI | CCWGG | 2 cut(s) | 291, 455 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 254 |
| NlaIII | CATG | 4 cut(s) | 201, 285, 327, 371 |
| NspI | RCATGY | 1 cut(s) | 327 |
| PagI | TCATGA | 1 cut(s) | 367 |
| PfeI | GAWTC | 2 cut(s) | 65, 71 |
| PkrI | GCNGC | 2 cut(s) | 271, 322 |
| Psp6I | CCWGG | 2 cut(s) | 289, 453 |
| PspGI | CCWGG | 2 cut(s) | 289, 453 |
| PspPI | GGNCC | 1 cut(s) | 144 |
| RsaI | GTAC | 1 cut(s) | 335 |
| RsaNI | GTAC | 1 cut(s) | 334 |
| RseI | CAYNNNNRTG | 1 cut(s) | 490 |
| SaqAI | TTAA | 3 cut(s) | 261, 428, 441 |
| SatI | GCNGC | 2 cut(s) | 270, 321 |
| Sau96I | GGNCC | 1 cut(s) | 144 |
| ScrFI | CCNGG | 2 cut(s) | 291, 455 |
| SduI | GDGCHC | 1 cut(s) | 487 |
| SetI | ASST | 6 cut(s) | 51, 133, 302, 367, 428, 459 |
| SfaNI | GCATC | 1 cut(s) | 28 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 490 |
| Sse9I | AATT | 3 cut(s) | 258, 371, 411 |
| SsiI | CCGC | 1 cut(s) | 242 |
| StyD4I | CCNGG | 2 cut(s) | 289, 453 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TasI | AATT | 3 cut(s) | 258, 371, 411 |
| TatI | WGTACW | 1 cut(s) | 333 |
| TfiI | GAWTC | 2 cut(s) | 65, 71 |
| Tru1I | TTAA | 3 cut(s) | 261, 428, 441 |
| Tru9I | TTAA | 3 cut(s) | 261, 428, 441 |
| TseI | GCWGC | 2 cut(s) | 269, 320 |
| TspDTI | ATGAA | 1 cut(s) | 384 |
| TspGWI | ACGGA | 1 cut(s) | 488 |
| XceI | RCATGY | 1 cut(s) | 327 |