Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000378

Physical Location & Seq

Genomic Coordinates Forward (+)

36821327 .. 36822844

Gene Structure 1518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG207000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGAACCTTCTTCCTTCAAATCCATGGCACGGCAATGCAACTTGTACGGTTTTGACCGCATTATTCTACTCCACTAAAACCCTGCCTTCGTCTCTGTACCGCAGGATTCTCCTCGCCGGAGACGGAAACCCTAGGGTTTCAATCACCCCCGTACTCAACCAGTGGTTAAACGAAGGCCGAGGCGTGCAGAAGCCGGAGCTCGTCGATTTCATCAAGCAGCTCCGCAAGTGCCGTCGCTTCAACCACGCCCTCGAGCTCTCGGAATGGATGACCGGCGAAATGAGGCACGGGATGACAGCCGGAGACGTCTCGACTCGGCTGGATTTGATCTCGAAAGTCCATGGGCTCGAGGAAGCTGACAAGTATTTCGATAGCGTCTCCGGCTCCGGCGCAGCCAGAGGCTTCAGAGGTATGCGTGTGTATGGTGCTCTGTTATTCTGCTATGTTGATCATAAATGTGTCGAAAAGGCCGAGAGGCTTTTCGAGAGGATGAAGGAGTTGGGGTATGTGGAAGGAGTTTGGGCTTATAATACAATGTTGACGCTTTATTTTAGGATGTGTGAGAGTGCAAAGGTAGATGTTTTAGTGAAAGAGATGGAAGATAGAGGAATTGGTCATAACAGCTACACATTGCGGGTTTTGTTGGGTTCGTATGCAGCGAGTTGTGATGTGGAGCAAATGGAGAAGGTTATGATGCTGATGGAAGAAGATGGAGTGGTCAAAATGGACTGGAATGGTTATGTTTTTGCGGCGGATGCTTTTCGGAAGGCTGGACAGGTGGAGAGGGCATTGACATTGCTGGGGACAGCGGAGCAGAAAATCCGTGGCAAGGAGGAAAGGAGAATTGCTTACGAGCACCTGATCACATTATATGCTGCTGCTGGTGATAAAAGGCAGGTCTTTCGAATTTGGAGGTTGTACAGAAAGTTGAGGAGGTTCTCCAATAGGGGGTATCATTGTATGATAAGTTCGTTGGTTAAATTGGATGACATTGGTGGTGCCGAGAGGATTTGTAGGGAATGGGAGTCTGGATTCAAGTATTTTGATGGTAAAATACCAAGATTGTTGATCAATGCTTACTGCAGTAAGGGTCTTTTCCAGAAGGCCAAATCATATGTACAGAGGCTTGCAGAGAGTGGAAAGGAGGATGTAAGCACATGGTTGGCTTTGGCTGAGGGATTCTGTTGTTATGGTCGTGTATCAGAGGCAGTGGAAACGATGAGAAAGGCAGCAAGCTTGCCATGTCGACCAGGATGGAGGATCCATCATTCGACTTTGGTTGGCTGTCTTGATTACTTGAAAGAGAAGGGAGATGTGGAAGGAGCTCATGAGTTGATGAGATTATTGGGAGAAAAGGGTCATCTACGAGCAGACCTGTGTGATAAATTTGAGAACTATATCCATGGGGAAACCCAGATTGAGTCCTTAATATCAGGTCAAGAGGAAAATCATATGGAGGGACTTGATGGAATTCAGGATGGAGAGGCATCTGATAGTGGAGCTCAACAATGGGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

505

Amino Acids

57.34

Weight (kDa)

7.54

Isoelectric Point (pI)

25.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	173 - 219	3.9e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20710 AT2G20710 AT2G20720
fragaria_vesca	FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica	MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica	Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis	pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis	RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata	RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora	Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii	Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa	Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha	Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana	Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	528
AatII	GACGTC	1 cut(s)	309
Acc36I	ACCTGC	1 cut(s)	886
AccB1I	GGYRCC	1 cut(s)	998
AccI	GTMKAC	1 cut(s)	1246
AciI	CCGC	7 cut(s)	57, 100, 223, 634, 749, 752, 809
AclWI	GGATC	2 cut(s)	1255, 1268
AcsI	RAATTY	3 cut(s)	906, 1385, 1470
AcuI	CTGAAG	1 cut(s)	388
AcyI	GRCGYC	1 cut(s)	306
AfaI	GTAC	5 cut(s)	46, 98, 153, 920, 1119
AfiI	CCNNNNNNNGG	3 cut(s)	29, 829, 948
AgsI	TTSAA	5 cut(s)	18, 141, 241, 1036, 1300
AjnI	CCWGG	1 cut(s)	1249
AluBI	AGCT	8 cut(s)	199, 220, 256, 356, 624, 1236, 1325, 1502
AluI	AGCT	8 cut(s)	199, 220, 256, 356, 624, 1236, 1325, 1502
Alw21I	GWGCWC	6 cut(s)	201, 258, 430, 858, 1327, 1504
Alw26I	GTCTC	5 cut(s)	96, 114, 297, 313, 382
AlwI	GGATC	2 cut(s)	1255, 1268
Ama87I	CYCGRG	2 cut(s)	251, 347
AoxI	GGCC	3 cut(s)	175, 468, 1104
ApeKI	GCWGC	6 cut(s)	217, 392, 656, 875, 878, 1229
ApoI	RAATTY	3 cut(s)	906, 1385, 1470
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
AspA2I	CCTAGG	1 cut(s)	131
AspLEI	GCGC	1 cut(s)	392
AsuHPI	GGTGA	2 cut(s)	136, 896
AsuII	TTCGAA	1 cut(s)	904
AvaI	CYCGRG	2 cut(s)	251, 347
AvrII	CCTAGG	1 cut(s)	131
BamHI	GGATCC	1 cut(s)	1260
BanI	GGYRCC	1 cut(s)	998
BanII	GRGCYC	5 cut(s)	201, 258, 348, 1327, 1504
Bbv12I	GWGCWC	6 cut(s)	201, 258, 430, 858, 1327, 1504
BbvCI	CCTCAGC	1 cut(s)	1173
BbvI	GCAGC	6 cut(s)	229, 404, 668, 862, 865, 1241
BccI	CCATC	8 cut(s)	589, 694, 704, 1040, 1248, 1272, 1460, 1472
BceAI	ACGGC	2 cut(s)	46, 216
BcgI	CGANNNNNNTGC	2 cut(s)	884, 918
BciT130I	CCWGG	1 cut(s)	1251
BclI	TGATCA	3 cut(s)	448, 861, 1068
BcoDI	GTCTC	5 cut(s)	96, 114, 297, 313, 382
BfaI	CTAG	1 cut(s)	132
BfmI	CTRYAG	1 cut(s)	1081
BfuAI	ACCTGC	1 cut(s)	886
BisI	GCNGC	7 cut(s)	218, 393, 657, 750, 876, 879, 1230
BlnI	CCTAGG	1 cut(s)	131
BlsI	GCNGC	7 cut(s)	219, 394, 658, 751, 877, 880, 1231
Bme1390I	CCNGG	1 cut(s)	1251
BmeT110I	CYCGRG	2 cut(s)	251, 347
BmiI	GGNNCC	3 cut(s)	385, 1000, 1262
BmrFI	CCNGG	1 cut(s)	1251
BmsI	GCATC	3 cut(s)	684, 745, 1496
Bpu10I	CCTNAGC	1 cut(s)	1173
Bpu14I	TTCGAA	1 cut(s)	904
BsaHI	GRCGYC	1 cut(s)	306
BsaJI	CCNNGG	6 cut(s)	23, 131, 178, 340, 823, 1402
BsaXI	ACNNNNNCTCC	2 cut(s)	488, 518
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 829, 948
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	2 cut(s)	160, 734
Bse3DI	GCAATG	3 cut(s)	40, 629, 794
BseBI	CCWGG	1 cut(s)	1251
BseDI	CCNNGG	6 cut(s)	23, 131, 178, 340, 823, 1402
BseGI	GGATG	9 cut(s)	273, 297, 495, 561, 760, 991, 1153, 1259, 1483
BseLI	CCNNNNNNNGG	3 cut(s)	29, 829, 948
BseMI	GCAATG	3 cut(s)	40, 629, 794
BseMII	CTCAG	1 cut(s)	1164
BseNI	ACTGG	2 cut(s)	160, 734
BseRI	GAGGAG	2 cut(s)	101, 946
BseXI	GCAGC	6 cut(s)	229, 404, 668, 862, 865, 1241
BseYI	CCCAGC	1 cut(s)	799
BsgI	GTGCAG	1 cut(s)	206
BshFI	GGCC	3 cut(s)	177, 470, 1106
BshNI	GGYRCC	1 cut(s)	998
BsiHKAI	GWGCWC	6 cut(s)	201, 258, 430, 858, 1327, 1504
BsiHKCI	CYCGRG	2 cut(s)	251, 347
BsiSI	CCGG	6 cut(s)	117, 194, 273, 300, 381, 387
BslFI	GGGAC	2 cut(s)	817, 1473
BslI	CCNNNNNNNGG	3 cut(s)	29, 829, 948
BsmAI	GTCTC	5 cut(s)	96, 114, 297, 313, 382
BsmBI	CGTCTC	5 cut(s)	96, 114, 297, 313, 382
BsmFI	GGGAC	2 cut(s)	817, 1473
BsnI	GGCC	3 cut(s)	177, 470, 1106
BsoBI	CYCGRG	2 cut(s)	251, 347
Bsp119I	TTCGAA	1 cut(s)	904
Bsp1286I	GDGCHC	7 cut(s)	201, 258, 348, 430, 858, 1327, 1504
Bsp1407I	TGTACA	2 cut(s)	918, 1117
Bsp143I	GATC	5 cut(s)	327, 448, 861, 1068, 1260
Bsp19I	CCATGG	3 cut(s)	23, 340, 1402
BspACI	CCGC	7 cut(s)	57, 100, 223, 634, 749, 752, 809
BspANI	GGCC	3 cut(s)	177, 470, 1106
BspCNI	CTCAG	1 cut(s)	1165
BspHI	TCATGA	1 cut(s)	1327
BspLI	GGNNCC	3 cut(s)	385, 1000, 1262
BspMAI	CTGCAG	1 cut(s)	1085
BspMI	ACCTGC	1 cut(s)	886
BspPI	GGATC	2 cut(s)	1255, 1268
BspT104I	TTCGAA	1 cut(s)	904
BspT107I	GGYRCC	1 cut(s)	998
BsrDI	GCAATG	3 cut(s)	40, 629, 794
BsrFI	RCCGGY	1 cut(s)	272
BsrGI	TGTACA	2 cut(s)	918, 1117
BsrI	ACTGG	2 cut(s)	160, 734
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	6 cut(s)	23, 131, 178, 340, 823, 1402
BssMI	GATC	5 cut(s)	327, 448, 861, 1068, 1260
BssNI	GRCGYC	1 cut(s)	306
BssT1I	CCWWGG	4 cut(s)	23, 131, 340, 1402
Bst2UI	CCWGG	1 cut(s)	1251
Bst4CI	ACNGT	1 cut(s)	49
BstACI	GRCGYC	1 cut(s)	306
BstAUI	TGTACA	2 cut(s)	918, 1117
BstBI	TTCGAA	1 cut(s)	904
BstC8I	GCNNGC	4 cut(s)	185, 1128, 1234, 1238
BstDEI	CTNAG	1 cut(s)	1173
BstDSI	CCRYGG	4 cut(s)	23, 340, 823, 1402
BstF5I	GGATG	9 cut(s)	273, 297, 495, 561, 760, 991, 1153, 1259, 1483
BstHHI	GCGC	1 cut(s)	392
BstKTI	GATC	5 cut(s)	330, 451, 864, 1071, 1263
BstMAI	GTCTC	5 cut(s)	96, 114, 297, 313, 382
BstMBI	GATC	5 cut(s)	327, 448, 861, 1068, 1260
BstMWI	GCNNNNNNNGC	2 cut(s)	381, 755
BstNI	CCWGG	1 cut(s)	1251
BstSCI	CCNGG	1 cut(s)	1249
BstSFI	CTRYAG	1 cut(s)	1081
BstV1I	GCAGC	6 cut(s)	229, 404, 668, 862, 865, 1241
BstX2I	RGATCY	1 cut(s)	1260
BstYI	RGATCY	1 cut(s)	1260
BsuRI	GGCC	3 cut(s)	177, 470, 1106
BtgI	CCRYGG	4 cut(s)	23, 340, 823, 1402
BtsCI	GGATG	9 cut(s)	273, 297, 495, 561, 760, 991, 1153, 1259, 1483
BtsI	GCAGTG	1 cut(s)	1215
BtsIMutI	CAGTG	2 cut(s)	167, 1215
BveI	ACCTGC	1 cut(s)	886
Cac8I	GCNNGC	4 cut(s)	185, 1128, 1234, 1238
CciI	TCATGA	1 cut(s)	1327
CfoI	GCGC	1 cut(s)	392
Cfr10I	RCCGGY	1 cut(s)	272
CseI	GACGC	2 cut(s)	364, 550
Csp6I	GTAC	5 cut(s)	45, 97, 152, 919, 1118
CviAII	CATG	6 cut(s)	24, 341, 1158, 1242, 1328, 1403
CviQI	GTAC	5 cut(s)	45, 97, 152, 919, 1118
DdeI	CTNAG	1 cut(s)	1173
DpnI	GATC	5 cut(s)	329, 450, 863, 1070, 1262
DpnII	GATC	5 cut(s)	327, 448, 861, 1068, 1260
EciI	GGCGGA	1 cut(s)	767
Ecl136II	GAGCTC	4 cut(s)	199, 256, 1325, 1502
Eco130I	CCWWGG	4 cut(s)	23, 131, 340, 1402
Eco24I	GRGCYC	5 cut(s)	201, 258, 348, 1327, 1504
Eco53kI	GAGCTC	4 cut(s)	199, 256, 1325, 1502
Eco57I	CTGAAG	1 cut(s)	388
Eco88I	CYCGRG	2 cut(s)	251, 347
EcoICRI	GAGCTC	4 cut(s)	199, 256, 1325, 1502
EcoRI	GAATTC	1 cut(s)	1470
EcoRII	CCWGG	1 cut(s)	1249
EcoT14I	CCWWGG	4 cut(s)	23, 131, 340, 1402
EcoT38I	GRGCYC	5 cut(s)	201, 258, 348, 1327, 1504
ErhI	CCWWGG	4 cut(s)	23, 131, 340, 1402
Esp3I	CGTCTC	5 cut(s)	96, 114, 297, 313, 382
FaeI	CATG	6 cut(s)	27, 344, 1161, 1245, 1331, 1406
FaqI	GGGAC	2 cut(s)	817, 1473
FatI	CATG	6 cut(s)	23, 340, 1157, 1241, 1327, 1402
FauI	CCCGC	1 cut(s)	627
FauNDI	CATATG	2 cut(s)	1114, 1452
FbaI	TGATCA	3 cut(s)	448, 861, 1068
FblI	GTMKAC	1 cut(s)	1246
Fnu4HI	GCNGC	7 cut(s)	218, 393, 657, 750, 876, 879, 1230
FokI	GGATG	9 cut(s)	280, 304, 502, 568, 767, 998, 1160, 1266, 1490
FriOI	GRGCYC	5 cut(s)	201, 258, 348, 1327, 1504
Fsp4HI	GCNGC	7 cut(s)	218, 393, 657, 750, 876, 879, 1230
FspBI	CTAG	1 cut(s)	132
GlaI	GCGC	1 cut(s)	391
GluI	GCNGC	7 cut(s)	218, 393, 657, 750, 876, 879, 1230
GsaI	CCCAGC	1 cut(s)	803
HaeIII	GGCC	3 cut(s)	177, 470, 1106
HapII	CCGG	6 cut(s)	117, 194, 273, 300, 381, 387
HgaI	GACGC	2 cut(s)	364, 550
HhaI	GCGC	1 cut(s)	392
Hin1I	GRCGYC	1 cut(s)	306
Hin1II	CATG	6 cut(s)	27, 344, 1161, 1245, 1331, 1406
Hin6I	GCGC	1 cut(s)	390
HinP1I	GCGC	1 cut(s)	390
HincII	GTYRAC	2 cut(s)	540, 1247
HindII	GTYRAC	2 cut(s)	540, 1247
HindIII	AAGCTT	1 cut(s)	1234
HinfI	GANTC	6 cut(s)	106, 313, 1025, 1032, 1179, 1421
HpaII	CCGG	6 cut(s)	117, 194, 273, 300, 381, 387
HphI	GGTGA	2 cut(s)	136, 896
Hpy166II	GTNNAC	2 cut(s)	540, 1247
Hpy188I	TCNGA	5 cut(s)	262, 407, 765, 1204, 1492
Hpy188III	TCNNGA	9 cut(s)	310, 331, 484, 1029, 1099, 1289, 1328, 1439, 1475
Hpy8I	GTNNAC	2 cut(s)	540, 1247
Hpy99I	CGWCG	2 cut(s)	206, 237
HpyCH4III	ACNGT	1 cut(s)	49
HpyCH4IV	ACGT	1 cut(s)	306
HpyCH4V	TGCA	6 cut(s)	38, 187, 569, 656, 1083, 1130
HpyF10VI	GCNNNNNNNGC	2 cut(s)	381, 755
HpyF3I	CTNAG	1 cut(s)	1173
HpySE526I	ACGT	1 cut(s)	306
Hsp92I	GRCGYC	1 cut(s)	306
Hsp92II	CATG	6 cut(s)	27, 344, 1161, 1245, 1331, 1406
HspAI	GCGC	1 cut(s)	390
Ksp22I	TGATCA	3 cut(s)	448, 861, 1068
Kzo9I	GATC	5 cut(s)	327, 448, 861, 1068, 1260
LmnI	GCTCC	7 cut(s)	196, 225, 389, 673, 811, 1322, 1499
Lsp1109I	GCAGC	6 cut(s)	229, 404, 668, 862, 865, 1241
LweI	GCATC	3 cut(s)	684, 745, 1496
MaeI	CTAG	1 cut(s)	132
MaeII	ACGT	1 cut(s)	306
MalI	GATC	5 cut(s)	329, 450, 863, 1070, 1262
MboI	GATC	5 cut(s)	327, 448, 861, 1068, 1260
MboII	GAAGA	3 cut(s)	611, 716, 719
MflI	RGATCY	1 cut(s)	1260
MhlI	GDGCHC	7 cut(s)	201, 258, 348, 430, 858, 1327, 1504
MluCI	AATT	6 cut(s)	609, 843, 906, 980, 1385, 1470
MlyI	GAGTC	3 cut(s)	307, 1034, 1430
MseI	TTAA	3 cut(s)	167, 978, 1427
MslI	CAYNNNNRTG	2 cut(s)	33, 456
MspA1I	CMGCKG	1 cut(s)	809
MspI	CCGG	6 cut(s)	117, 194, 273, 300, 381, 387
MspR9I	CCNGG	1 cut(s)	1251
MvaI	CCWGG	1 cut(s)	1251
MwoI	GCNNNNNNNGC	2 cut(s)	381, 755
NcoI	CCATGG	3 cut(s)	23, 340, 1402
NdeI	CATATG	2 cut(s)	1114, 1452
NdeII	GATC	5 cut(s)	327, 448, 861, 1068, 1260
NlaIII	CATG	6 cut(s)	27, 344, 1161, 1245, 1331, 1406
NlaIV	GGNNCC	3 cut(s)	385, 1000, 1262
NmeAIII	GCCGAG	4 cut(s)	203, 295, 496, 1027
NspV	TTCGAA	1 cut(s)	904
PaeR7I	CTCGAG	2 cut(s)	251, 347
PagI	TCATGA	1 cut(s)	1327
PcsI	WCGNNNNNNNCGW	2 cut(s)	468, 656
PfeI	GAWTC	3 cut(s)	106, 1032, 1179
PkrI	GCNGC	7 cut(s)	219, 394, 658, 751, 877, 880, 1231
PleI	GAGTC	3 cut(s)	307, 1033, 1429
PpsI	GAGTC	3 cut(s)	307, 1033, 1429
PsiI	TTATAA	1 cut(s)	528
Psp124BI	GAGCTC	4 cut(s)	201, 258, 1327, 1504
Psp6I	CCWGG	1 cut(s)	1249
PspFI	CCCAGC	1 cut(s)	799
PspGI	CCWGG	1 cut(s)	1249
PspN4I	GGNNCC	3 cut(s)	385, 1000, 1262
PspXI	VCTCGAGB	2 cut(s)	251, 347
PsrI	GAACNNNNNNTAC	2 cut(s)	952, 984
PstI	CTGCAG	1 cut(s)	1085
PsuI	RGATCY	1 cut(s)	1260
RsaI	GTAC	5 cut(s)	46, 98, 153, 920, 1119
RsaNI	GTAC	5 cut(s)	45, 97, 152, 919, 1118
RseI	CAYNNNNRTG	2 cut(s)	33, 456
SacI	GAGCTC	4 cut(s)	201, 258, 1327, 1504
SalI	GTCGAC	1 cut(s)	1245
SaqAI	TTAA	3 cut(s)	167, 978, 1427
SatI	GCNGC	7 cut(s)	218, 393, 657, 750, 876, 879, 1230
Sau3AI	GATC	5 cut(s)	327, 448, 861, 1068, 1260
SchI	GAGTC	3 cut(s)	307, 1034, 1430
ScrFI	CCNGG	1 cut(s)	1251
SduI	GDGCHC	7 cut(s)	201, 258, 348, 430, 858, 1327, 1504
SfaNI	GCATC	3 cut(s)	684, 745, 1496
SfcI	CTRYAG	1 cut(s)	1081
Sfr274I	CTCGAG	2 cut(s)	251, 347
SfuI	TTCGAA	1 cut(s)	904
SlaI	CTCGAG	2 cut(s)	251, 347
SmiMI	CAYNNNNRTG	2 cut(s)	33, 456
SmlI	CTYRAG	2 cut(s)	251, 347
SmoI	CTYRAG	2 cut(s)	251, 347
Sse9I	AATT	6 cut(s)	609, 843, 906, 980, 1385, 1470
SsiI	CCGC	7 cut(s)	57, 100, 223, 634, 749, 752, 809
SspMI	CTAG	1 cut(s)	132
SstI	GAGCTC	4 cut(s)	201, 258, 1327, 1504
StyD4I	CCNGG	1 cut(s)	1249
StyI	CCWWGG	4 cut(s)	23, 131, 340, 1402
TaaI	ACNGT	1 cut(s)	49
TaiI	ACGT	1 cut(s)	309
TasI	AATT	6 cut(s)	609, 843, 906, 980, 1385, 1470
TatI	WGTACW	2 cut(s)	918, 1117
TauI	GCSGC	1 cut(s)	752
TfiI	GAWTC	3 cut(s)	106, 1032, 1179
Tru1I	TTAA	3 cut(s)	167, 978, 1427
Tru9I	TTAA	3 cut(s)	167, 978, 1427
TscAI	CASTG	2 cut(s)	167, 1215
TseI	GCWGC	6 cut(s)	217, 392, 656, 875, 878, 1229
TspDTI	ATGAA	3 cut(s)	17, 199, 506
TspGWI	ACGGA	2 cut(s)	138, 812
TspRI	CASTG	2 cut(s)	167, 1215
XapI	RAATTY	3 cut(s)	906, 1385, 1470
XhoI	CTCGAG	2 cut(s)	251, 347
XmaJI	CCTAGG	1 cut(s)	131
XmiI	GTMKAC	1 cut(s)	1246
XspI	CTAG	1 cut(s)	132
ZraI	GACGTC	1 cut(s)	307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.