Rh3CG241500

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000378
Physical Location & Seq
Reverse (-)
23121316 .. 23125114
3799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG241500.1

Sequence Viewer

Length: 1596 bp
ATGCTTAAACCCCATTTGGCTGCTCTGCTCCGAACACCACCGTCTCTTCCTCCCTCTTCTCTCCAGATGAAGCCTTCTCGCTGGAGCCCCCTATTCAATATCTACTCTCGTTTACCTGGCGTTTCGCTCTACTCAACGACGGCCAAATCGCCGCCGTCCACGTCTCACAGAACCCACTGGAAAGGCACACTCAACCGCCTCTACGGTCGGATTTCGAAGATCGCAGATCCTAAGGCCCCCATTCACCCGATTCTCGACCAGTGGATTCAACAAGGCCGACCCGTCGATAAAGTCGGCCTCGTCTTTATGATTAAGGAGCTCAAGCACTTTAAACGCTTCGACAACGCTCTTCAGGTATCAATGTGGATGACTGACAAAAGGTACTTTGAACTTTCTCCGGCTGACGCAGCGGTTCGGCTGGACTTGATTGCAAAAGTTCATGGAGTGGAACAAGCTGAGAGTTATTTTGACAACATTCCCATACAATTGAAATCGCTTGGGGTTTACTTGGCTCTTCTCAACTGCTATGCCCATGCAAAGCTTGTTGAGAAAGCGGAGACCACAATGCAGAAGATTAGGGATTTGGGGCTCGCTAGGACGTCGTTGGCTTACAACAATTTGCTCAATTTGTATTATCAGACTGGAAAGCGTGATAAGCTTGATGTGCTGGTGAATGAAATGGAGGAGAAGGGCATCCAGTGTAACAAATTCACATACGGGATCCTGCTCAGTGCATATGCTGCTGCTTCTGACTTTGAGGCAGTTGAGAAGATTCTTGCACAATGGGAATCACATCCTGATTGTCGTTTGGATTGGATTAACTATGCGGTTGTGGCAAATGTTTATATAAAAGCAGGAAATGAGGACAAGGCTTTGGCAATGCTAAAGAAGTCTGAGGAGCTGATACCAAGTTCTGAAAGACGGAGGGAAGCATACGAGCACCTTGTGCCACAATATGCAGCACTAGGGAAGAAAGATAATGTTGTGAGACTATGGGAACTTTACAAGGGTCAGATGAAAGTATACAATAAAGGTTATAGAATCATGATAACCTCACTCTTGAAGATTGGTGACAGTGAGAGTGCCGAGAAGATCTTTGAAGAGTGGGAATCTCAGCAATCAGTTTATGATGTTCGTATCCCAAATCACTTGATTGCTGCTTATGCCAGAAAAGGTCTTCTTGACAAGGCGGAAGCTATTATTGAAAGGGTTATACTGAAGGGTGCGAAACCTGATGCAAAGTCATGGTATTCTTTGGCAAAAGTGCATCTTGATCATGATCAAACTGAGAAGGCAGTTGAGTTGACGAGAAAAGCACTTTTGGCTGTGCAGCCTGGTTGGAAGACCAACAAGGATGTTTGGGCTGCCTGTCTCAACTACTTGATAAAGAAACCTGATCCAGAGGGCGCCAAGGAATATATAATGCTACTCACTGATAAGAATGTTATCACCGTGATTACACAGGAGAGACTGTTGAATAACATAAATAAGGCGGATTCAAACTCTGTAACACCAGGCGAAATGGAAGGGGATGGTCAAAATGGAGATGAAGAAGCAAGTGAAGTTTCAGAAGTGGAGGGGAGTCGTAGCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

531

Amino Acids

60.17

Weight (kDa)

8.7

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 201 - 247 1.8e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000378)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20710 AT2G20710 AT2G20720
fragaria_vesca FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 602
AccB1I GGYRCC 1 cut(s) 1406
AccI GTMKAC 1 cut(s) 1023
AciI CCGC 7 cut(s) 152, 196, 410, 554, 827, 1190, 1493
AclWI GGATC 4 cut(s) 221, 715, 728, 1391
AcoI YGGCCR 1 cut(s) 141
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 2 cut(s) 335, 1238
AcyI GRCGYC 2 cut(s) 599, 1407
AdeI CACNNNGTG 1 cut(s) 946
AfaI GTAC 1 cut(s) 383
AgsI TTSAA 9 cut(s) 97, 269, 389, 490, 1063, 1100, 1205, 1477, 1500
AjiI CACGTC 1 cut(s) 162
AjnI CCWGG 3 cut(s) 115, 1333, 1513
AluBI AGCT 7 cut(s) 319, 455, 541, 658, 901, 1196, 1590
AluI AGCT 7 cut(s) 319, 455, 541, 658, 901, 1196, 1590
Alw21I GWGCWC 2 cut(s) 321, 942
Alw26I GTCTC 6 cut(s) 48, 168, 551, 982, 1376, 1462
AlwI GGATC 4 cut(s) 221, 715, 728, 1391
AoxI GGCC 4 cut(s) 141, 234, 274, 295
ApeKI GCWGC 9 cut(s) 20, 407, 740, 743, 959, 1157, 1330, 1364, 1590
ApoI RAATTY 1 cut(s) 707
AspLEI GCGC 1 cut(s) 1409
AspS9I GGNCC 1 cut(s) 235
AsuHPI GGTGA 4 cut(s) 236, 682, 1082, 1441
AsuII TTCGAA 1 cut(s) 215
AxyI CCTNAGG 1 cut(s) 231
BamHI GGATCC 1 cut(s) 720
BanI GGYRCC 1 cut(s) 1406
BanII GRGCYC 3 cut(s) 89, 321, 591
BbsI GAAGAC 2 cut(s) 1169, 1349
Bbv12I GWGCWC 2 cut(s) 321, 942
BbvI GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
BccI CCATC 1 cut(s) 1526
BceAI ACGGC 2 cut(s) 139, 156
BciT130I CCWGG 3 cut(s) 117, 1335, 1515
BciVI GTATCC 1 cut(s) 1148
BclI TGATCA 2 cut(s) 1273, 1279
BcoDI GTCTC 6 cut(s) 48, 168, 551, 982, 1376, 1462
BfaI CTAG 3 cut(s) 594, 965, 1594
BfoI RGCGCY 1 cut(s) 1410
BfuI GTATCC 1 cut(s) 1148
BglII AGATCT 1 cut(s) 1092
Bme1390I CCNGG 3 cut(s) 117, 1335, 1515
BmgBI CACGTC 1 cut(s) 162
BmgT120I GGNCC 1 cut(s) 235
BmiI GGNNCC 4 cut(s) 86, 237, 722, 1408
BmrFI CCNGG 3 cut(s) 117, 1335, 1515
BmsI GCATC 3 cut(s) 702, 1225, 1276
BpiI GAAGAC 2 cut(s) 1169, 1349
BpmI CTGGAG 2 cut(s) 47, 103
Bpu14I TTCGAA 1 cut(s) 215
BpuEI CTTGAG 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 1278
BsaHI GRCGYC 2 cut(s) 599, 1407
BsaI GGTCTC 1 cut(s) 551
BsaJI CCNNGG 1 cut(s) 1410
BsaXI ACNNNNNCTCC 2 cut(s) 1457, 1487
Bse1I ACTGG 4 cut(s) 182, 259, 646, 697
Bse21I CCTNAGG 1 cut(s) 231
Bse3DI GCAATG 1 cut(s) 885
Bse8I GATNNNNATC 1 cut(s) 1278
BseBI CCWGG 3 cut(s) 117, 1335, 1515
BseDI CCNNGG 1 cut(s) 1410
BseGI GGATG 5 cut(s) 372, 693, 793, 1360, 1537
BseJI GATNNNNATC 1 cut(s) 1278
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 5 cut(s) 447, 742, 885, 1127, 1278
BseNI ACTGG 4 cut(s) 182, 259, 646, 697
BseRI GAGGAG 2 cut(s) 698, 911
BseXI GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
BsgI GTGCAG 1 cut(s) 1349
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 4 cut(s) 143, 236, 276, 297
BshNI GGYRCC 1 cut(s) 1406
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 2 cut(s) 321, 942
BsiSI CCGG 1 cut(s) 398
BsmAI GTCTC 6 cut(s) 48, 168, 551, 982, 1376, 1462
BsmBI CGTCTC 2 cut(s) 48, 168
BsnI GGCC 4 cut(s) 143, 236, 276, 297
Bso31I GGTCTC 1 cut(s) 551
Bsp119I TTCGAA 1 cut(s) 215
Bsp1286I GDGCHC 4 cut(s) 89, 321, 591, 942
Bsp143I GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
BspACI CCGC 7 cut(s) 152, 196, 410, 554, 827, 1190, 1493
BspANI GGCC 4 cut(s) 143, 236, 276, 297
BspCNI CTCAG 5 cut(s) 448, 741, 886, 1126, 1279
BspHI TCATGA 2 cut(s) 1044, 1276
BspLI GGNNCC 4 cut(s) 86, 237, 722, 1408
BspPI GGATC 4 cut(s) 221, 715, 728, 1391
BspQI GCTCTTC 2 cut(s) 354, 519
BspT104I TTCGAA 1 cut(s) 215
BspT107I GGYRCC 1 cut(s) 1406
BspTNI GGTCTC 1 cut(s) 551
BsrDI GCAATG 1 cut(s) 885
BsrI ACTGG 4 cut(s) 182, 259, 646, 697
BssECI CCNNGG 1 cut(s) 1410
BssMI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
BssNAI GTATAC 1 cut(s) 1024
BssNI GRCGYC 2 cut(s) 599, 1407
BssT1I CCWWGG 1 cut(s) 1410
Bst1107I GTATAC 1 cut(s) 1024
Bst2UI CCWGG 3 cut(s) 117, 1335, 1515
Bst4CI ACNGT 5 cut(s) 42, 206, 1076, 1453, 1473
Bst6I CTCTTC 5 cut(s) 51, 61, 354, 519, 1095
BstACI GRCGYC 2 cut(s) 599, 1407
BstAPI GCANNNNNTGC 2 cut(s) 740, 946
BstBI TTCGAA 1 cut(s) 215
BstC8I GCNNGC 1 cut(s) 591
BstDEI CTNAG 6 cut(s) 231, 456, 728, 894, 1113, 1287
BstF5I GGATG 5 cut(s) 372, 693, 793, 1360, 1537
BstH2I RGCGCY 1 cut(s) 1410
BstHHI GCGC 1 cut(s) 1409
BstKTI GATC 7 cut(s) 222, 229, 723, 1095, 1276, 1282, 1399
BstMAI GTCTC 6 cut(s) 48, 168, 551, 982, 1376, 1462
BstMBI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 8 cut(s) 407, 655, 664, 740, 833, 946, 1163, 1322
BstNI CCWGG 3 cut(s) 117, 1335, 1515
BstSCI CCNGG 3 cut(s) 115, 1333, 1513
BstV1I GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
BstV2I GAAGAC 2 cut(s) 1169, 1349
BstX2I RGATCY 3 cut(s) 226, 720, 1092
BstYI RGATCY 3 cut(s) 226, 720, 1092
BstZ17I GTATAC 1 cut(s) 1024
Bsu36I CCTNAGG 1 cut(s) 231
BsuI GTATCC 1 cut(s) 1148
BsuRI GGCC 4 cut(s) 143, 236, 276, 297
BtrI CACGTC 1 cut(s) 162
BtsCI GGATG 5 cut(s) 372, 693, 793, 1360, 1537
BtsIMutI CAGTG 6 cut(s) 175, 266, 704, 736, 1081, 1431
Cac8I GCNNGC 1 cut(s) 591
CciI TCATGA 2 cut(s) 1044, 1276
CfoI GCGC 1 cut(s) 1409
Cfr13I GGNCC 1 cut(s) 235
CseI GACGC 1 cut(s) 413
Csp6I GTAC 1 cut(s) 382
CviAII CATG 5 cut(s) 440, 533, 1045, 1245, 1277
CviQI GTAC 1 cut(s) 382
DdeI CTNAG 6 cut(s) 231, 456, 728, 894, 1113, 1287
DinI GGCGCC 1 cut(s) 1408
DpnI GATC 7 cut(s) 221, 228, 722, 1094, 1275, 1281, 1398
DpnII GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
DraI TTTAAA 1 cut(s) 331
DraIII CACNNNGTG 1 cut(s) 946
EaeI YGGCCR 1 cut(s) 141
Eam1104I CTCTTC 5 cut(s) 51, 61, 354, 519, 1095
EarI CTCTTC 5 cut(s) 51, 61, 354, 519, 1095
EciI GGCGGA 2 cut(s) 1205, 1508
Ecl136II GAGCTC 1 cut(s) 319
Eco130I CCWWGG 1 cut(s) 1410
Eco24I GRGCYC 3 cut(s) 89, 321, 591
Eco31I GGTCTC 1 cut(s) 551
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 2 cut(s) 335, 1238
Eco81I CCTNAGG 1 cut(s) 231
EcoICRI GAGCTC 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 235
EcoRII CCWGG 3 cut(s) 115, 1333, 1513
EcoT14I CCWWGG 1 cut(s) 1410
EcoT38I GRGCYC 3 cut(s) 89, 321, 591
EgeI GGCGCC 1 cut(s) 1408
EheI GGCGCC 1 cut(s) 1408
ErhI CCWWGG 1 cut(s) 1410
Esp3I CGTCTC 2 cut(s) 48, 168
FaeI CATG 5 cut(s) 443, 536, 1048, 1248, 1280
FalI AAGNNNNNCTT 4 cut(s) 1164, 1196, 1254, 1286
FatI CATG 5 cut(s) 439, 532, 1044, 1244, 1276
FauNDI CATATG 1 cut(s) 736
FbaI TGATCA 2 cut(s) 1273, 1279
FblI GTMKAC 1 cut(s) 1023
FokI GGATG 5 cut(s) 379, 680, 780, 1367, 1544
FriOI GRGCYC 3 cut(s) 89, 321, 591
FspBI CTAG 3 cut(s) 594, 965, 1594
GlaI GCGC 1 cut(s) 1408
GsuI CTGGAG 2 cut(s) 47, 103
HaeII RGCGCY 1 cut(s) 1410
HaeIII GGCC 4 cut(s) 143, 236, 276, 297
HapII CCGG 1 cut(s) 398
HgaI GACGC 1 cut(s) 413
HhaI GCGC 1 cut(s) 1409
Hin1I GRCGYC 2 cut(s) 599, 1407
Hin1II CATG 5 cut(s) 443, 536, 1048, 1248, 1280
Hin6I GCGC 1 cut(s) 1407
HinP1I GCGC 1 cut(s) 1407
HincII GTYRAC 1 cut(s) 1305
HindII GTYRAC 1 cut(s) 1305
HindIII AAGCTT 2 cut(s) 539, 656
HinfI GANTC 8 cut(s) 250, 265, 772, 788, 1041, 1109, 1496, 1582
HpaII CCGG 1 cut(s) 398
HphI GGTGA 4 cut(s) 236, 682, 1082, 1441
Hpy166II GTNNAC 5 cut(s) 113, 159, 505, 1024, 1305
Hpy188I TCNGA 8 cut(s) 32, 210, 639, 751, 895, 916, 1014, 1570
Hpy188III TCNNGA 9 cut(s) 64, 254, 797, 1045, 1060, 1181, 1271, 1277, 1400
Hpy8I GTNNAC 5 cut(s) 113, 159, 505, 1024, 1305
Hpy99I CGWCG 3 cut(s) 142, 287, 604
HpyAV CCTTC 5 cut(s) 84, 682, 1213, 1285, 1520
HpyCH4III ACNGT 5 cut(s) 42, 206, 1076, 1453, 1473
HpyCH4IV ACGT 2 cut(s) 161, 599
HpyCH4V TGCA 9 cut(s) 431, 536, 568, 734, 779, 959, 1238, 1267, 1330
HpyF10VI GCNNNNNNNGC 8 cut(s) 407, 655, 664, 740, 833, 946, 1163, 1322
HpyF3I CTNAG 6 cut(s) 231, 456, 728, 894, 1113, 1287
HpySE526I ACGT 2 cut(s) 161, 599
Hsp92I GRCGYC 2 cut(s) 599, 1407
Hsp92II CATG 5 cut(s) 443, 536, 1048, 1248, 1280
HspAI GCGC 1 cut(s) 1407
KasI GGCGCC 1 cut(s) 1406
Ksp22I TGATCA 2 cut(s) 1273, 1279
Kzo9I GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
LguI GCTCTTC 2 cut(s) 354, 519
LmnI GCTCC 4 cut(s) 33, 84, 316, 898
Lsp1109I GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
LweI GCATC 3 cut(s) 702, 1225, 1276
MaeI CTAG 3 cut(s) 594, 965, 1594
MaeII ACGT 2 cut(s) 161, 599
MaeIII GTNAC 3 cut(s) 701, 1070, 1507
MalI GATC 7 cut(s) 221, 228, 722, 1094, 1275, 1281, 1398
MboI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
MfeI CAATTG 1 cut(s) 485
MflI RGATCY 3 cut(s) 226, 720, 1092
MhlI GDGCHC 4 cut(s) 89, 321, 591, 942
MluCI AATT 4 cut(s) 485, 616, 625, 707
Mly113I GGCGCC 1 cut(s) 1407
MlyI GAGTC 1 cut(s) 1591
MmeI TCCRAC 2 cut(s) 188, 1319
MseI TTAA 4 cut(s) 6, 312, 330, 819
MspA1I CMGCKG 1 cut(s) 410
MspI CCGG 1 cut(s) 398
MspR9I CCNGG 3 cut(s) 117, 1335, 1515
MunI CAATTG 1 cut(s) 485
MvaI CCWGG 3 cut(s) 117, 1335, 1515
MwoI GCNNNNNNNGC 8 cut(s) 407, 655, 664, 740, 833, 946, 1163, 1322
NarI GGCGCC 1 cut(s) 1407
NdeI CATATG 1 cut(s) 736
NdeII GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
NlaIII CATG 5 cut(s) 443, 536, 1048, 1248, 1280
NlaIV GGNNCC 4 cut(s) 86, 237, 722, 1408
NmeAIII GCCGAG 1 cut(s) 1111
NmuCI GTSAC 1 cut(s) 1070
NspV TTCGAA 1 cut(s) 215
PagI TCATGA 2 cut(s) 1044, 1276
PciSI GCTCTTC 2 cut(s) 354, 519
PfeI GAWTC 7 cut(s) 250, 265, 772, 788, 1041, 1109, 1496
PleI GAGTC 1 cut(s) 1590
PluTI GGCGCC 1 cut(s) 1410
PpsI GAGTC 1 cut(s) 1590
Psp124BI GAGCTC 1 cut(s) 321
Psp6I CCWGG 3 cut(s) 115, 1333, 1513
PspGI CCWGG 3 cut(s) 115, 1333, 1513
PspN4I GGNNCC 4 cut(s) 86, 237, 722, 1408
PspPI GGNCC 1 cut(s) 235
PsuI RGATCY 3 cut(s) 226, 720, 1092
RsaI GTAC 1 cut(s) 383
RsaNI GTAC 1 cut(s) 382
SacI GAGCTC 1 cut(s) 321
SapI GCTCTTC 2 cut(s) 354, 519
SaqAI TTAA 4 cut(s) 6, 312, 330, 819
Sau3AI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
Sau96I GGNCC 1 cut(s) 235
SchI GAGTC 1 cut(s) 1591
ScrFI CCNGG 3 cut(s) 117, 1335, 1515
SduI GDGCHC 4 cut(s) 89, 321, 591, 942
SfaNI GCATC 3 cut(s) 702, 1225, 1276
SfoI GGCGCC 1 cut(s) 1408
SfuI TTCGAA 1 cut(s) 215
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
Sse9I AATT 4 cut(s) 485, 616, 625, 707
SsiI CCGC 7 cut(s) 152, 196, 410, 554, 827, 1190, 1493
SspDI GGCGCC 1 cut(s) 1406
SspMI CTAG 3 cut(s) 594, 965, 1594
SstI GAGCTC 1 cut(s) 321
StyD4I CCNGG 3 cut(s) 115, 1333, 1513
StyI CCWWGG 1 cut(s) 1410
TaaI ACNGT 5 cut(s) 42, 206, 1076, 1453, 1473
TaiI ACGT 2 cut(s) 164, 602
TaqI TCGA 4 cut(s) 215, 255, 285, 339
TasI AATT 4 cut(s) 485, 616, 625, 707
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 7 cut(s) 250, 265, 772, 788, 1041, 1109, 1496
Tru1I TTAA 4 cut(s) 6, 312, 330, 819
Tru9I TTAA 4 cut(s) 6, 312, 330, 819
TscAI CASTG 6 cut(s) 182, 266, 704, 736, 1081, 1438
TseFI GTSAC 1 cut(s) 1070
TseI GCWGC 9 cut(s) 20, 407, 740, 743, 959, 1157, 1330, 1364, 1590
Tsp45I GTSAC 1 cut(s) 1070
TspDTI ATGAA 5 cut(s) 83, 428, 690, 1031, 1563
TspGWI ACGGA 1 cut(s) 937
TspRI CASTG 6 cut(s) 182, 266, 704, 736, 1081, 1438
XapI RAATTY 1 cut(s) 707
XmiI GTMKAC 1 cut(s) 1023
XspI CTAG 3 cut(s) 594, 965, 1594
ZraI GACGTC 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.