Rh3DG240900

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000378
Physical Location & Seq
Reverse (-)
23156260 .. 23159646
3387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG240900.1

Sequence Viewer

Length: 1596 bp
ATGCTTAAACCCCATTTGGCTGCTCTGCTCCGAACACCACCTTCTCTTCCTCCCTCTTCTCTCCAGATGAAGCCTTCTCGCTGGAGCCCCCTATTCAATATCTACTCTCGTTTACCTGGCGTTTCGCTCTACTCAACGACGGCCAAATCGCCGCCGTCCACGTCTCACAGAACCCACTGGAAAGGCACACTCAACCGCCTCTACGGTCGGATTTCGAAGATCGCAGATCCTAAGGCCCCCATTCACCCGATTCTCGACCAGTGGATTCAACAAGGCCGACCCGTCGATAAAGTCGGCCTCGTCTTTATGATTAAGGAGCTCAAGCACTTTAAACGCTTCGACAACGCTCTTCAGGTATCAATGTGGATGACTGACAAAAGGTACTTTGAACTTTCTCCGGCTGACGCAGCGGTTCGGCTGGACTTAATTGCAAAAGTTCATGGAGTGGAAAAAGCTGAGAGTTATTTTGACAACATTCCCATACAATTGAAATCGCTTGGGGTGTACTTGGCTCTGCTCAACTGCTATGCCCATGCAAAGTTTGTTGAGAAAGCTGAGGCCACAATGCAGAAGATTAGGGATTTGGGGCTCGCTAGGACGTCGTTGGCTTACAACAATTTGCTCAATTTGTATTATCAGACTGGAAAGCGTGATAAGCTTGACGTGCTGGTGAATGAAATGGAGGAGAAGGGCATCCAGTGTAACAAATTCACATACGGGATCCTGCTCAGTGCATATGCTGCTGCTTCTGACTTTGAGGCAGTTGAGAAGATTCTTGCACAATGGGAATCACATCCTGATTGTCGTTTGGATTGGATTAACTATGCGGTTGTGGCAAATGTTTATATAAAAGCAGGAAATGAGGACAAGGCTTTGGAAATGCTAAAGAAGTCTGAGGAGCTGATACCAAGTTCTGAAAGACGGAGGGAAGCATACGAGCACCTTGTGCCACAATATGCAGCACTAGGGAAGAAAGATAATGTTGTGAGACTATGGGAACTTTACAAGGGTCAGATGAAAGTATACAATAAAGGTTATAGAATCATGATAACCTCACTCTTGAAGATTGGTGACAGTGAGAGTGCCGAGAAGATCTTTGAAGAGTGGGAATCTCAGCAATCAGTTTATGATGTTCGTATCCCAAATCACTTGATTGCTGCTTATGCCAGAAAAGGTCTTCTTGACAAGGCTGAAGCTATTATTGAAAGGGTTATACTGAAGGGTGCGAAACCTGATGCAAAGTCATGGTATTCTTTGGCAAAAGTGCATCTTGATCATGATCAAACTGAGAAGGCAGTTGAGTTGACGAGAAAAGCACTTTTGGCTGTGCAGCCTGGTTGGAAGACCAACAAGGATGTTTGGGCTGCCTGTCTCAACTACTTGATAAAGAAACCTGATCCAGAGGGCGCCAAGGAATATATAAAGCTACTCACTGATAAGAATGTTATCACCGTGATTACACAGGAGAGACTGTTGAATAACATAAATAAGGCGGATTCAAACTCTGTAACACCAGGCGAAATGGAAGGGGATGGTCAAAATGGAGATGAAGAAGCAAGTGAAGTTTCAGAAGTGGAGGGGAGTCGTAGCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

531

Amino Acids

60.22

Weight (kDa)

8.78

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 201 - 247 1.8e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000378)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20710 AT2G20710 AT2G20720
fragaria_vesca FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 602
AccB1I GGYRCC 1 cut(s) 1406
AccI GTMKAC 1 cut(s) 1023
AciI CCGC 5 cut(s) 152, 196, 410, 827, 1493
AclWI GGATC 4 cut(s) 221, 715, 728, 1391
AcoI YGGCCR 1 cut(s) 141
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 3 cut(s) 335, 1212, 1238
AcyI GRCGYC 2 cut(s) 599, 1407
AdeI CACNNNGTG 1 cut(s) 946
AfaI GTAC 2 cut(s) 383, 506
AgsI TTSAA 9 cut(s) 97, 269, 389, 490, 1063, 1100, 1205, 1477, 1500
AjiI CACGTC 2 cut(s) 162, 664
AjnI CCWGG 3 cut(s) 115, 1333, 1513
AluBI AGCT 8 cut(s) 319, 455, 554, 658, 901, 1196, 1426, 1590
AluI AGCT 8 cut(s) 319, 455, 554, 658, 901, 1196, 1426, 1590
Alw21I GWGCWC 2 cut(s) 321, 942
Alw26I GTCTC 4 cut(s) 168, 982, 1376, 1462
AlwI GGATC 4 cut(s) 221, 715, 728, 1391
AoxI GGCC 5 cut(s) 141, 234, 274, 295, 558
ApeKI GCWGC 9 cut(s) 20, 407, 740, 743, 959, 1157, 1330, 1364, 1590
ApoI RAATTY 1 cut(s) 707
AspLEI GCGC 1 cut(s) 1409
AspS9I GGNCC 1 cut(s) 235
AsuHPI GGTGA 4 cut(s) 236, 682, 1082, 1441
AsuII TTCGAA 1 cut(s) 215
AxyI CCTNAGG 1 cut(s) 231
BamHI GGATCC 1 cut(s) 720
BanI GGYRCC 1 cut(s) 1406
BanII GRGCYC 3 cut(s) 89, 321, 591
BbsI GAAGAC 2 cut(s) 1169, 1349
Bbv12I GWGCWC 2 cut(s) 321, 942
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
BccI CCATC 1 cut(s) 1526
BceAI ACGGC 2 cut(s) 139, 156
BciT130I CCWGG 3 cut(s) 117, 1335, 1515
BciVI GTATCC 1 cut(s) 1148
BclI TGATCA 2 cut(s) 1273, 1279
BcoDI GTCTC 4 cut(s) 168, 982, 1376, 1462
BfaI CTAG 3 cut(s) 594, 965, 1594
BfoI RGCGCY 1 cut(s) 1410
BfuI GTATCC 1 cut(s) 1148
BglII AGATCT 1 cut(s) 1092
Bme1390I CCNGG 3 cut(s) 117, 1335, 1515
BmgBI CACGTC 2 cut(s) 162, 664
BmgT120I GGNCC 1 cut(s) 235
BmiI GGNNCC 4 cut(s) 86, 237, 722, 1408
BmrFI CCNGG 3 cut(s) 117, 1335, 1515
BmsI GCATC 3 cut(s) 702, 1225, 1276
BpiI GAAGAC 2 cut(s) 1169, 1349
BpmI CTGGAG 2 cut(s) 47, 103
Bpu10I CCTNAGC 1 cut(s) 555
Bpu14I TTCGAA 1 cut(s) 215
BpuEI CTTGAG 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 1278
BsaHI GRCGYC 2 cut(s) 599, 1407
BsaJI CCNNGG 1 cut(s) 1410
BsaXI ACNNNNNCTCC 2 cut(s) 1457, 1487
Bse1I ACTGG 4 cut(s) 182, 259, 646, 697
Bse21I CCTNAGG 1 cut(s) 231
Bse8I GATNNNNATC 1 cut(s) 1278
BseBI CCWGG 3 cut(s) 117, 1335, 1515
BseDI CCNNGG 1 cut(s) 1410
BseGI GGATG 5 cut(s) 372, 693, 793, 1360, 1537
BseJI GATNNNNATC 1 cut(s) 1278
BseMII CTCAG 6 cut(s) 447, 546, 742, 885, 1127, 1278
BseNI ACTGG 4 cut(s) 182, 259, 646, 697
BseRI GAGGAG 2 cut(s) 698, 911
BseXI GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
BsgI GTGCAG 1 cut(s) 1349
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 5 cut(s) 143, 236, 276, 297, 560
BshNI GGYRCC 1 cut(s) 1406
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 2 cut(s) 321, 942
BsiSI CCGG 1 cut(s) 398
BsmAI GTCTC 4 cut(s) 168, 982, 1376, 1462
BsmBI CGTCTC 1 cut(s) 168
BsnI GGCC 5 cut(s) 143, 236, 276, 297, 560
Bsp119I TTCGAA 1 cut(s) 215
Bsp1286I GDGCHC 4 cut(s) 89, 321, 591, 942
Bsp143I GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
BspACI CCGC 5 cut(s) 152, 196, 410, 827, 1493
BspANI GGCC 5 cut(s) 143, 236, 276, 297, 560
BspCNI CTCAG 6 cut(s) 448, 547, 741, 886, 1126, 1279
BspHI TCATGA 2 cut(s) 1044, 1276
BspLI GGNNCC 4 cut(s) 86, 237, 722, 1408
BspPI GGATC 4 cut(s) 221, 715, 728, 1391
BspQI GCTCTTC 1 cut(s) 354
BspT104I TTCGAA 1 cut(s) 215
BspT107I GGYRCC 1 cut(s) 1406
BsrI ACTGG 4 cut(s) 182, 259, 646, 697
BssECI CCNNGG 1 cut(s) 1410
BssMI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
BssNAI GTATAC 1 cut(s) 1024
BssNI GRCGYC 2 cut(s) 599, 1407
BssT1I CCWWGG 1 cut(s) 1410
Bst1107I GTATAC 1 cut(s) 1024
Bst2UI CCWGG 3 cut(s) 117, 1335, 1515
Bst4CI ACNGT 4 cut(s) 206, 1076, 1453, 1473
Bst6I CTCTTC 4 cut(s) 51, 61, 354, 1095
BstACI GRCGYC 2 cut(s) 599, 1407
BstAPI GCANNNNNTGC 2 cut(s) 740, 946
BstBI TTCGAA 1 cut(s) 215
BstC8I GCNNGC 1 cut(s) 591
BstDEI CTNAG 7 cut(s) 231, 456, 555, 728, 894, 1113, 1287
BstF5I GGATG 5 cut(s) 372, 693, 793, 1360, 1537
BstH2I RGCGCY 1 cut(s) 1410
BstHHI GCGC 1 cut(s) 1409
BstKTI GATC 7 cut(s) 222, 229, 723, 1095, 1276, 1282, 1399
BstMAI GTCTC 4 cut(s) 168, 982, 1376, 1462
BstMBI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 8 cut(s) 407, 655, 664, 740, 833, 946, 1163, 1322
BstNI CCWGG 3 cut(s) 117, 1335, 1515
BstSCI CCNGG 3 cut(s) 115, 1333, 1513
BstV1I GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
BstV2I GAAGAC 2 cut(s) 1169, 1349
BstX2I RGATCY 3 cut(s) 226, 720, 1092
BstYI RGATCY 3 cut(s) 226, 720, 1092
BstZ17I GTATAC 1 cut(s) 1024
Bsu36I CCTNAGG 1 cut(s) 231
BsuI GTATCC 1 cut(s) 1148
BsuRI GGCC 5 cut(s) 143, 236, 276, 297, 560
BtrI CACGTC 2 cut(s) 162, 664
BtsCI GGATG 5 cut(s) 372, 693, 793, 1360, 1537
BtsIMutI CAGTG 6 cut(s) 175, 266, 704, 736, 1081, 1431
Cac8I GCNNGC 1 cut(s) 591
CciI TCATGA 2 cut(s) 1044, 1276
CfoI GCGC 1 cut(s) 1409
Cfr13I GGNCC 1 cut(s) 235
CseI GACGC 1 cut(s) 413
Csp6I GTAC 2 cut(s) 382, 505
CviAII CATG 5 cut(s) 440, 533, 1045, 1245, 1277
CviQI GTAC 2 cut(s) 382, 505
DdeI CTNAG 7 cut(s) 231, 456, 555, 728, 894, 1113, 1287
DinI GGCGCC 1 cut(s) 1408
DpnI GATC 7 cut(s) 221, 228, 722, 1094, 1275, 1281, 1398
DpnII GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
DraI TTTAAA 1 cut(s) 331
DraIII CACNNNGTG 1 cut(s) 946
EaeI YGGCCR 1 cut(s) 141
Eam1104I CTCTTC 4 cut(s) 51, 61, 354, 1095
EarI CTCTTC 4 cut(s) 51, 61, 354, 1095
EciI GGCGGA 1 cut(s) 1508
Ecl136II GAGCTC 1 cut(s) 319
Eco130I CCWWGG 1 cut(s) 1410
Eco24I GRGCYC 3 cut(s) 89, 321, 591
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 3 cut(s) 335, 1212, 1238
Eco81I CCTNAGG 1 cut(s) 231
EcoICRI GAGCTC 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 235
EcoRII CCWGG 3 cut(s) 115, 1333, 1513
EcoT14I CCWWGG 1 cut(s) 1410
EcoT38I GRGCYC 3 cut(s) 89, 321, 591
EgeI GGCGCC 1 cut(s) 1408
EheI GGCGCC 1 cut(s) 1408
ErhI CCWWGG 1 cut(s) 1410
Esp3I CGTCTC 1 cut(s) 168
FaeI CATG 5 cut(s) 443, 536, 1048, 1248, 1280
FalI AAGNNNNNCTT 4 cut(s) 1164, 1196, 1254, 1286
FatI CATG 5 cut(s) 439, 532, 1044, 1244, 1276
FauNDI CATATG 1 cut(s) 736
FbaI TGATCA 2 cut(s) 1273, 1279
FblI GTMKAC 1 cut(s) 1023
FokI GGATG 5 cut(s) 379, 680, 780, 1367, 1544
FriOI GRGCYC 3 cut(s) 89, 321, 591
FspBI CTAG 3 cut(s) 594, 965, 1594
GlaI GCGC 1 cut(s) 1408
GsuI CTGGAG 2 cut(s) 47, 103
HaeII RGCGCY 1 cut(s) 1410
HaeIII GGCC 5 cut(s) 143, 236, 276, 297, 560
HapII CCGG 1 cut(s) 398
HgaI GACGC 1 cut(s) 413
HhaI GCGC 1 cut(s) 1409
Hin1I GRCGYC 2 cut(s) 599, 1407
Hin1II CATG 5 cut(s) 443, 536, 1048, 1248, 1280
Hin6I GCGC 1 cut(s) 1407
HinP1I GCGC 1 cut(s) 1407
HincII GTYRAC 1 cut(s) 1305
HindII GTYRAC 1 cut(s) 1305
HindIII AAGCTT 1 cut(s) 656
HinfI GANTC 8 cut(s) 250, 265, 772, 788, 1041, 1109, 1496, 1582
HpaII CCGG 1 cut(s) 398
HphI GGTGA 4 cut(s) 236, 682, 1082, 1441
Hpy166II GTNNAC 5 cut(s) 113, 159, 505, 1024, 1305
Hpy188I TCNGA 8 cut(s) 32, 210, 639, 751, 895, 916, 1014, 1570
Hpy188III TCNNGA 9 cut(s) 64, 254, 797, 1045, 1060, 1181, 1271, 1277, 1400
Hpy8I GTNNAC 5 cut(s) 113, 159, 505, 1024, 1305
Hpy99I CGWCG 3 cut(s) 142, 287, 604
HpyAV CCTTC 6 cut(s) 51, 84, 682, 1213, 1285, 1520
HpyCH4III ACNGT 4 cut(s) 206, 1076, 1453, 1473
HpyCH4IV ACGT 3 cut(s) 161, 599, 663
HpyCH4V TGCA 9 cut(s) 431, 536, 568, 734, 779, 959, 1238, 1267, 1330
HpyF10VI GCNNNNNNNGC 8 cut(s) 407, 655, 664, 740, 833, 946, 1163, 1322
HpyF3I CTNAG 7 cut(s) 231, 456, 555, 728, 894, 1113, 1287
HpySE526I ACGT 3 cut(s) 161, 599, 663
Hsp92I GRCGYC 2 cut(s) 599, 1407
Hsp92II CATG 5 cut(s) 443, 536, 1048, 1248, 1280
HspAI GCGC 1 cut(s) 1407
KasI GGCGCC 1 cut(s) 1406
Ksp22I TGATCA 2 cut(s) 1273, 1279
Kzo9I GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
LguI GCTCTTC 1 cut(s) 354
LmnI GCTCC 4 cut(s) 33, 84, 316, 898
Lsp1109I GCAGC 9 cut(s) 7, 419, 727, 730, 971, 1144, 1342, 1351, 1577
LweI GCATC 3 cut(s) 702, 1225, 1276
MaeI CTAG 3 cut(s) 594, 965, 1594
MaeII ACGT 3 cut(s) 161, 599, 663
MaeIII GTNAC 3 cut(s) 701, 1070, 1507
MalI GATC 7 cut(s) 221, 228, 722, 1094, 1275, 1281, 1398
MboI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
MfeI CAATTG 1 cut(s) 485
MflI RGATCY 3 cut(s) 226, 720, 1092
MhlI GDGCHC 4 cut(s) 89, 321, 591, 942
MluCI AATT 5 cut(s) 426, 485, 616, 625, 707
Mly113I GGCGCC 1 cut(s) 1407
MlyI GAGTC 1 cut(s) 1591
MmeI TCCRAC 2 cut(s) 188, 1319
MseI TTAA 5 cut(s) 6, 312, 330, 425, 819
MspA1I CMGCKG 1 cut(s) 410
MspI CCGG 1 cut(s) 398
MspR9I CCNGG 3 cut(s) 117, 1335, 1515
MunI CAATTG 1 cut(s) 485
MvaI CCWGG 3 cut(s) 117, 1335, 1515
MwoI GCNNNNNNNGC 8 cut(s) 407, 655, 664, 740, 833, 946, 1163, 1322
NarI GGCGCC 1 cut(s) 1407
NdeI CATATG 1 cut(s) 736
NdeII GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
NlaIII CATG 5 cut(s) 443, 536, 1048, 1248, 1280
NlaIV GGNNCC 4 cut(s) 86, 237, 722, 1408
NmeAIII GCCGAG 1 cut(s) 1111
NmuCI GTSAC 1 cut(s) 1070
NspV TTCGAA 1 cut(s) 215
PagI TCATGA 2 cut(s) 1044, 1276
PciSI GCTCTTC 1 cut(s) 354
PfeI GAWTC 7 cut(s) 250, 265, 772, 788, 1041, 1109, 1496
PleI GAGTC 1 cut(s) 1590
PluTI GGCGCC 1 cut(s) 1410
PpsI GAGTC 1 cut(s) 1590
Psp124BI GAGCTC 1 cut(s) 321
Psp6I CCWGG 3 cut(s) 115, 1333, 1513
PspGI CCWGG 3 cut(s) 115, 1333, 1513
PspN4I GGNNCC 4 cut(s) 86, 237, 722, 1408
PspPI GGNCC 1 cut(s) 235
PsuI RGATCY 3 cut(s) 226, 720, 1092
RsaI GTAC 2 cut(s) 383, 506
RsaNI GTAC 2 cut(s) 382, 505
SacI GAGCTC 1 cut(s) 321
SapI GCTCTTC 1 cut(s) 354
SaqAI TTAA 5 cut(s) 6, 312, 330, 425, 819
Sau3AI GATC 7 cut(s) 219, 226, 720, 1092, 1273, 1279, 1396
Sau96I GGNCC 1 cut(s) 235
SchI GAGTC 1 cut(s) 1591
ScrFI CCNGG 3 cut(s) 117, 1335, 1515
SduI GDGCHC 4 cut(s) 89, 321, 591, 942
SfaNI GCATC 3 cut(s) 702, 1225, 1276
SfoI GGCGCC 1 cut(s) 1408
SfuI TTCGAA 1 cut(s) 215
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
Sse9I AATT 5 cut(s) 426, 485, 616, 625, 707
SsiI CCGC 5 cut(s) 152, 196, 410, 827, 1493
SspDI GGCGCC 1 cut(s) 1406
SspMI CTAG 3 cut(s) 594, 965, 1594
SstI GAGCTC 1 cut(s) 321
StyD4I CCNGG 3 cut(s) 115, 1333, 1513
StyI CCWWGG 1 cut(s) 1410
TaaI ACNGT 4 cut(s) 206, 1076, 1453, 1473
TaiI ACGT 3 cut(s) 164, 602, 666
TaqI TCGA 4 cut(s) 215, 255, 285, 339
TasI AATT 5 cut(s) 426, 485, 616, 625, 707
TatI WGTACW 1 cut(s) 504
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 7 cut(s) 250, 265, 772, 788, 1041, 1109, 1496
Tru1I TTAA 5 cut(s) 6, 312, 330, 425, 819
Tru9I TTAA 5 cut(s) 6, 312, 330, 425, 819
TscAI CASTG 6 cut(s) 182, 266, 704, 736, 1081, 1438
TseFI GTSAC 1 cut(s) 1070
TseI GCWGC 9 cut(s) 20, 407, 740, 743, 959, 1157, 1330, 1364, 1590
Tsp45I GTSAC 1 cut(s) 1070
TspDTI ATGAA 5 cut(s) 83, 428, 690, 1031, 1563
TspGWI ACGGA 1 cut(s) 937
TspRI CASTG 6 cut(s) 182, 266, 704, 736, 1081, 1438
XapI RAATTY 1 cut(s) 707
XmiI GTMKAC 1 cut(s) 1023
XspI CTAG 3 cut(s) 594, 965, 1594
ZraI GACGTC 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.