Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000378

Physical Location & Seq

Genomic Coordinates Forward (+)

36517897 .. 36520069

Gene Structure 2173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG205500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGACGAACCTTCTTCGTTCAAATCCATGGCGCGGCAATGCCATTTCTAGGGTTTTCGGCGCATTATTCTACTCCACCAATGCCCTAGCTTCCCCACCACCCCCACTTCAGTCTCTGCACCGCAGGATTTGCTGGCTCCAAGACCAAGATCTCAAGGCTTCTATTTTCCCAATTCTCAGTCACTGGGCTGCGGAAGCTAGAGACGTCAATCAACTGGAGGTCCAAGCTTTCATCGTGAAGCTCCGTAAATCCAATCACTTCAACCACGCCCTCCAGGTCTCAACGTGGATGAGCGATGAATTGAAGCTCAGTCTGACTCCAGGAGACGTTGCTGCTCGGATAGATTTGATCTCGAGAGTTCACGGCCCCGATGAAGCCGAGAAGTATTTTGATGGTGTTTCGGAGCAATTGAAAGGTTTGCAAGCTTATTGTGCTCTCTTACATTGCTATGCTCAGCATAGATTGTTGGATAAGGCAGAGAGTGTTTTTGGAAAAATGAAGGAGTTAGGTTTTGAGATAGGAATTAGGTCCTATAATTCAATGTTATGGCTATGTTTTCGGACCGGTAATCATGGAAGGATAGATGTTTTAGTGAAAGAGATGGAAGAAAAAGGCATTGATTATAACCAAGGCACTTTGATGGTTAGGTTGTATTCGTATGCAGCCATTTCGGAGATAGGCCGAATGGAGGAGGTTTTGCTGAAGATGGAAGCCCATCCTCTGGTCACTATAAGCTGGCGTAGCTATGTTATTGCAGCCAATGCGTTGTCCAAGGTTGGAGAAGTGGACAAGGCATTGACATTGCTGAGGAGCTCGGAGAAACTCATTAGCAATAGCACAAGGAAAATTGCTTACGAACACCTGCTCTCTTCATACGCTGCTATTGGTAAGAGAGACGAGGTTGATAGAATCTCGAATTTGTATAAAAATTTGGGAAAGTGCTATAGTTATCGTCATATGTTAGTTGCATTTCTGAAAATGGATAACATTGATGGTGCTGAGAAGCTTGTGGAGGAATGTGAATCTGAATCCAAGAAGTTTGACATTCAGATAGGCAACTTGATGGTCAACGCTTACTGCAAGAAAGGTTATTTGGAGAGGGCTAAATCCTTTGTAGAGAAGCTTGCAGAGAGTGGAAAGGAGAATGTAAGCACATGGTGTCTTTTGAGTAAGGGATATTATAGGAATGGGTGTGTGGCGGAGGCCTTGCAAGCAATTAAAAAGGCAGCAAACTTGCCATGTCAACCAGGATGGAGGTTCAATCATTCAACTTTGGCTGCATGTCTTGTGTACTTGAAAGAGAACGGAGATGTGGAAACAGCTCATGAATTGCTGAGTTTACTGACAGAAAAGGGTCATATAACGACAATTTTTTGTGAGACCTTAAAAAGCTTTGTTAATGGTGAAACCCAGGTTCTGAGGTCTATTGGGGGTGAACAAGAAAATCATTTGGAGGATAAAATTCAGGACGGAGAGTTGGAGACTATGGATAGTGGAGCCCAACAATGTGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

504

Amino Acids

56.78

Weight (kDa)

6.74

Isoelectric Point (pI)

34.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	142 - 171	2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20710 AT2G20710 AT2G20720
fragaria_vesca	FvH4_6g21294 FvH4_6g21300 FvH4_6g21300 FvH4_6g21300
malus_domestica	MD02G1294300.v1.1 MD05G1022100.v1.1 MD05G1022200.v1.1 MD05G1046500.v1.1 MD09G1248800.v1.1 MD12G1049300.v1.1 MD17G1241400.v1.1
prunus_persica	Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.3G136900_v2.0.a1 Prupe.7G086900_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1 Prupe.8G026200_v2.0.a1
pyrus_communis	pycom02g24780 pycom05g01290 pycom05g01300 pycom09g16570 pycom12g04420 pycom14g03980 pycom17g24460
rosa_chinensis	RchiOBHm_Chr3g0477821 RchiOBHm_Chr3g0477851 RchiOBHm_Chr3g0477861 RchiOBHm_Chr3g0477891 RchiOBHm_Chr6g0275941 RchiOBHm_Chr6g0276181
rosa_laevigata	RLG00000013421 RLG00000013422 RLG00000023681 RLG00000023684 RLG00000023685 RLG00000023686 RLG00000023687 RLG00000023689
rosa_multiflora	Rmu_co8131942.1_g000001 Rmu_co8189010.1_g000001 Rmu_co8432533.1_g000001 Rmu_sc0002030.1_g000001 Rmu_sc0002030.1_g000002 Rmu_sc0005991.1_g000015 Rmu_sc0005991.1_g000019 Rmu_sc0005991.1_g000020 Rmu_sc0005991.1_g000021 Rmu_sc0017665.1_g000003 Rmu_sc0017665.1_g000006 Rmu_sc0017665.1_g000007 Rmu_sc0017867.1_g000002 Rmu_sc0017867.1_g000003 Rmu_sc0022989.1_g000003 Rmu_sc0022990.1_g000001 Rmu_ssc0000201.1_g000012 Rmu_ssc0000201.1_g000013 Rmu_ssc0000201.1_g000014
rosa_roxburghii	Rroxscaffold_6G00403620 Rroxscaffold_6G00403640 Rroxscaffold_6G00403650 Rroxscaffold_6G00403660 Rroxscaffold_6G00403690 Rroxscaffold_7G00192760
rosa_rugosa	Rorug03G0163500 Rorug03G0163600 Rorug03G0163800 Rorug06G0097700
rosa_samantha	Rh3AG213800 Rh3AG214000 Rh3AG214100 Rh3AG214200 Rh3AG214400 Rh3BG247600 Rh3BG247700 Rh3BG248000 Rh3CG241100 Rh3CG241500 Rh3CG241700 Rh3CG242000 Rh3DG240500 Rh3DG240900 Rh3DG241000 Rh3DG241100 Rh3DG241300 Rh6AG209100 Rh6AG210500 Rh6BG213200 Rh6BG214700 Rh6CG216100 Rh6CG217400 Rh6CG217500 Rh6DG205500 Rh6DG207000
rosa_wichuraiana	Rw3G019320 Rw6G018230 Rw6G018340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	624
AarI	CACCTGC	1 cut(s)	870
AatII	GACGTC	1 cut(s)	207
Acc36I	ACCTGC	1 cut(s)	870
AccB7I	CCANNNNNTGG	1 cut(s)	721
AccII	CGCG	1 cut(s)	33
AciI	CCGC	4 cut(s)	33, 121, 191, 1199
AcsI	RAATTY	3 cut(s)	916, 928, 1461
AcuI	CTGAAG	2 cut(s)	92, 722
AcyI	GRCGYC	1 cut(s)	204
AdeI	CACNNNGTG	1 cut(s)	1158
AfaI	GTAC	1 cut(s)	1292
AfiI	CCNNNNNNNGG	4 cut(s)	32, 48, 688, 721
AgeI	ACCGGT	1 cut(s)	563
AgsI	TTSAA	8 cut(s)	21, 262, 304, 412, 540, 1261, 1269, 1297
AjnI	CCWGG	4 cut(s)	273, 319, 1246, 1410
AjuI	GAANNNNNNNTTGG	2 cut(s)	1076, 1108
Alw21I	GWGCWC	2 cut(s)	436, 815
Alw26I	GTCTC	7 cut(s)	117, 195, 283, 318, 888, 1373, 1475
AlwNI	CAGNNNCTG	3 cut(s)	115, 183, 1417
Ama87I	CYCGRG	1 cut(s)	352
AoxI	GGCC	3 cut(s)	364, 679, 1203
ApeKI	GCWGC	7 cut(s)	188, 332, 662, 755, 878, 1226, 1277
ApoI	RAATTY	3 cut(s)	916, 928, 1461
AsiGI	ACCGGT	1 cut(s)	563
AspLEI	GCGC	2 cut(s)	33, 62
AspS9I	GGNCC	4 cut(s)	220, 365, 528, 561
AsuHPI	GGTGA	2 cut(s)	1415, 1445
AvaI	CYCGRG	1 cut(s)	352
AvaII	GGWCC	3 cut(s)	220, 528, 561
BanII	GRGCYC	2 cut(s)	815, 1501
Bbv12I	GWGCWC	2 cut(s)	436, 815
BbvCI	CCTCAGC	1 cut(s)	806
BbvI	GCAGC	7 cut(s)	175, 319, 674, 767, 865, 1238, 1264
BccI	CCATC	8 cut(s)	386, 595, 634, 700, 723, 986, 1057, 1245
BceAI	ACGGC	1 cut(s)	379
BcgI	CGANNNNNNTGC	2 cut(s)	651, 685
BciT130I	CCWGG	4 cut(s)	275, 321, 1248, 1412
BcoDI	GTCTC	7 cut(s)	117, 195, 283, 318, 888, 1373, 1475
BfaI	CTAG	3 cut(s)	48, 86, 198
BfmI	CTRYAG	1 cut(s)	943
BfuAI	ACCTGC	1 cut(s)	870
BglII	AGATCT	1 cut(s)	148
BisI	GCNGC	8 cut(s)	34, 189, 333, 663, 756, 879, 1227, 1278
BlpI	GCTNAGC	1 cut(s)	453
BlsI	GCNGC	8 cut(s)	35, 190, 334, 664, 757, 880, 1228, 1279
Bme1390I	CCNGG	4 cut(s)	275, 321, 1248, 1412
Bme18I	GGWCC	3 cut(s)	220, 528, 561
BmeT110I	CYCGRG	1 cut(s)	352
BmgT120I	GGNCC	4 cut(s)	220, 365, 528, 561
BmiI	GGNNCC	3 cut(s)	137, 367, 1498
BmrFI	CCNGG	4 cut(s)	275, 321, 1248, 1412
BmrI	ACTGGG	1 cut(s)	193
BmuI	ACTGGG	1 cut(s)	193
BpmI	CTGGAG	3 cut(s)	236, 257, 303
Bpu10I	CCTNAGC	1 cut(s)	806
Bpu1102I	GCTNAGC	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	137
BsaHI	GRCGYC	1 cut(s)	204
BsaI	GGTCTC	2 cut(s)	283, 1373
BsaJI	CCNNGG	4 cut(s)	26, 628, 771, 1410
BsaWI	WCCGGW	1 cut(s)	563
Bsc4I	CCNNNNNNNGG	4 cut(s)	32, 48, 688, 721
Bse118I	RCCGGY	1 cut(s)	563
Bse1I	ACTGG	2 cut(s)	188, 219
Bse3DI	GCAATG	3 cut(s)	43, 442, 800
BseBI	CCWGG	4 cut(s)	275, 321, 1248, 1412
BseDI	CCNNGG	4 cut(s)	26, 628, 771, 1410
BseGI	GGATG	3 cut(s)	294, 715, 1256
BseLI	CCNNNNNNNGG	4 cut(s)	32, 48, 688, 721
BseMI	GCAATG	3 cut(s)	43, 442, 800
BseMII	CTCAG	7 cut(s)	190, 322, 467, 797, 990, 1325, 1409
BseNI	ACTGG	2 cut(s)	188, 219
BseRI	GAGGAG	2 cut(s)	704, 823
BseXI	GCAGC	7 cut(s)	175, 319, 674, 767, 865, 1238, 1264
BsgI	GTGCAG	1 cut(s)	101
Bsh1236I	CGCG	1 cut(s)	33
BshFI	GGCC	3 cut(s)	366, 681, 1205
BshTI	ACCGGT	1 cut(s)	563
BsiHKAI	GWGCWC	2 cut(s)	436, 815
BsiHKCI	CYCGRG	1 cut(s)	352
BsiSI	CCGG	1 cut(s)	564
BslI	CCNNNNNNNGG	4 cut(s)	32, 48, 688, 721
BsmAI	GTCTC	7 cut(s)	117, 195, 283, 318, 888, 1373, 1475
BsmBI	CGTCTC	3 cut(s)	195, 318, 888
BsnI	GGCC	3 cut(s)	366, 681, 1205
Bso31I	GGTCTC	2 cut(s)	283, 1373
BsoBI	CYCGRG	1 cut(s)	352
Bsp1286I	GDGCHC	3 cut(s)	436, 815, 1501
Bsp143I	GATC	2 cut(s)	148, 348
Bsp1720I	GCTNAGC	1 cut(s)	453
Bsp19I	CCATGG	1 cut(s)	26
BspACI	CCGC	4 cut(s)	33, 121, 191, 1199
BspANI	GGCC	3 cut(s)	366, 681, 1205
BspCNI	CTCAG	7 cut(s)	189, 321, 466, 798, 991, 1326, 1410
BspFNI	CGCG	1 cut(s)	33
BspHI	TCATGA	1 cut(s)	1324
BspLI	GGNNCC	3 cut(s)	137, 367, 1498
BspMI	ACCTGC	1 cut(s)	870
BspTNI	GGTCTC	2 cut(s)	283, 1373
BsrDI	GCAATG	3 cut(s)	43, 442, 800
BsrFI	RCCGGY	1 cut(s)	563
BsrI	ACTGG	2 cut(s)	188, 219
BssAI	RCCGGY	1 cut(s)	563
BssECI	CCNNGG	4 cut(s)	26, 628, 771, 1410
BssMI	GATC	2 cut(s)	148, 348
BssNI	GRCGYC	1 cut(s)	204
BssT1I	CCWWGG	3 cut(s)	26, 628, 771
Bst2UI	CCWGG	4 cut(s)	275, 321, 1248, 1412
Bst6I	CTCTTC	1 cut(s)	874
BstACI	GRCGYC	1 cut(s)	204
BstAPI	GCANNNNNTGC	2 cut(s)	129, 761
BstC8I	GCNNGC	5 cut(s)	134, 423, 737, 1125, 1212
BstDEI	CTNAG	7 cut(s)	176, 308, 453, 806, 999, 1334, 1418
BstDSI	CCRYGG	1 cut(s)	26
BstF5I	GGATG	3 cut(s)	294, 715, 1256
BstFNI	CGCG	1 cut(s)	33
BstHHI	GCGC	2 cut(s)	33, 62
BstKTI	GATC	2 cut(s)	151, 351
BstMAI	GTCTC	7 cut(s)	117, 195, 283, 318, 888, 1373, 1475
BstMBI	GATC	2 cut(s)	148, 348
BstMWI	GCNNNNNNNGC	6 cut(s)	129, 194, 431, 741, 761, 1211
BstNI	CCWGG	4 cut(s)	275, 321, 1248, 1412
BstNSI	RCATGY	1 cut(s)	1284
BstSCI	CCNGG	4 cut(s)	273, 319, 1246, 1410
BstSFI	CTRYAG	1 cut(s)	943
BstUI	CGCG	1 cut(s)	33
BstV1I	GCAGC	7 cut(s)	175, 319, 674, 767, 865, 1238, 1264
BstX2I	RGATCY	1 cut(s)	148
BstXI	CCANNNNNNTGG	1 cut(s)	1508
BstYI	RGATCY	1 cut(s)	148
BsuRI	GGCC	3 cut(s)	366, 681, 1205
BtgI	CCRYGG	1 cut(s)	26
BtgZI	GCGATG	1 cut(s)	309
BtsCI	GGATG	3 cut(s)	294, 715, 1256
BtsIMutI	CAGTG	1 cut(s)	181
BveI	ACCTGC	1 cut(s)	870
Cac8I	GCNNGC	5 cut(s)	134, 423, 737, 1125, 1212
CaiI	CAGNNNCTG	3 cut(s)	115, 183, 1417
CciI	TCATGA	1 cut(s)	1324
CfoI	GCGC	2 cut(s)	33, 62
Cfr10I	RCCGGY	1 cut(s)	563
Cfr13I	GGNCC	4 cut(s)	220, 365, 528, 561
CpoI	CGGWCCG	1 cut(s)	561
Csp6I	GTAC	1 cut(s)	1291
CspAI	ACCGGT	1 cut(s)	563
CspI	CGGWCCG	1 cut(s)	561
CviAII	CATG	6 cut(s)	27, 572, 1155, 1239, 1281, 1325
CviQI	GTAC	1 cut(s)	1291
DdeI	CTNAG	7 cut(s)	176, 308, 453, 806, 999, 1334, 1418
DpnI	GATC	2 cut(s)	150, 350
DpnII	GATC	2 cut(s)	148, 348
DraIII	CACNNNGTG	1 cut(s)	1158
Eam1104I	CTCTTC	1 cut(s)	874
EarI	CTCTTC	1 cut(s)	874
EciI	GGCGGA	1 cut(s)	1214
Ecl136II	GAGCTC	1 cut(s)	813
Eco130I	CCWWGG	3 cut(s)	26, 628, 771
Eco147I	AGGCCT	1 cut(s)	1205
Eco24I	GRGCYC	2 cut(s)	815, 1501
Eco31I	GGTCTC	2 cut(s)	283, 1373
Eco47I	GGWCC	3 cut(s)	220, 528, 561
Eco53kI	GAGCTC	1 cut(s)	813
Eco57I	CTGAAG	2 cut(s)	92, 722
Eco88I	CYCGRG	1 cut(s)	352
EcoICRI	GAGCTC	1 cut(s)	813
EcoO109I	RGGNCCY	1 cut(s)	528
EcoRII	CCWGG	4 cut(s)	273, 319, 1246, 1410
EcoT14I	CCWWGG	3 cut(s)	26, 628, 771
EcoT38I	GRGCYC	2 cut(s)	815, 1501
ErhI	CCWWGG	3 cut(s)	26, 628, 771
Esp3I	CGTCTC	3 cut(s)	195, 318, 888
FaeI	CATG	6 cut(s)	30, 575, 1158, 1242, 1284, 1328
FatI	CATG	6 cut(s)	26, 571, 1154, 1238, 1280, 1324
FauNDI	CATATG	1 cut(s)	957
Fnu4HI	GCNGC	8 cut(s)	34, 189, 333, 663, 756, 879, 1227, 1278
FokI	GGATG	3 cut(s)	301, 702, 1263
FriOI	GRGCYC	2 cut(s)	815, 1501
Fsp4HI	GCNGC	8 cut(s)	34, 189, 333, 663, 756, 879, 1227, 1278
FspBI	CTAG	3 cut(s)	48, 86, 198
GlaI	GCGC	2 cut(s)	32, 61
GluI	GCNGC	8 cut(s)	34, 189, 333, 663, 756, 879, 1227, 1278
GsuI	CTGGAG	3 cut(s)	236, 257, 303
HaeIII	GGCC	3 cut(s)	366, 681, 1205
HapII	CCGG	1 cut(s)	564
HhaI	GCGC	2 cut(s)	33, 62
Hin1I	GRCGYC	1 cut(s)	204
Hin1II	CATG	6 cut(s)	30, 575, 1158, 1242, 1284, 1328
Hin6I	GCGC	2 cut(s)	31, 60
HinP1I	GCGC	2 cut(s)	31, 60
HincII	GTYRAC	2 cut(s)	1069, 1244
HindII	GTYRAC	2 cut(s)	1069, 1244
HindIII	AAGCTT	5 cut(s)	225, 423, 1004, 1121, 1390
HinfI	GANTC	4 cut(s)	316, 909, 1022, 1028
HpaII	CCGG	1 cut(s)	564
HphI	GGTGA	2 cut(s)	1415, 1445
Hpy166II	GTNNAC	7 cut(s)	361, 787, 1069, 1244, 1291, 1340, 1436
Hpy188III	TCNNGA	6 cut(s)	235, 352, 354, 913, 1325, 1466
Hpy8I	GTNNAC	7 cut(s)	361, 787, 1069, 1244, 1291, 1340, 1436
HpyAV	CCTTC	3 cut(s)	20, 493, 570
HpyCH4IV	ACGT	3 cut(s)	204, 284, 327
HpyCH4V	TGCA	9 cut(s)	118, 421, 662, 755, 968, 1080, 1127, 1210, 1280
HpyF10VI	GCNNNNNNNGC	6 cut(s)	129, 194, 431, 741, 761, 1211
HpyF3I	CTNAG	7 cut(s)	176, 308, 453, 806, 999, 1334, 1418
HpySE526I	ACGT	3 cut(s)	204, 284, 327
Hsp92I	GRCGYC	1 cut(s)	204
Hsp92II	CATG	6 cut(s)	30, 575, 1158, 1242, 1284, 1328
HspAI	GCGC	2 cut(s)	31, 60
Kzo9I	GATC	2 cut(s)	148, 348
LmnI	GCTCC	5 cut(s)	141, 246, 403, 810, 1496
Lsp1109I	GCAGC	7 cut(s)	175, 319, 674, 767, 865, 1238, 1264
MaeI	CTAG	3 cut(s)	48, 86, 198
MaeII	ACGT	3 cut(s)	204, 284, 327
MaeIII	GTNAC	2 cut(s)	179, 724
MalI	GATC	2 cut(s)	150, 350
MboI	GATC	2 cut(s)	148, 348
MboII	GAAGA	4 cut(s)	5, 617, 715, 861
MfeI	CAATTG	1 cut(s)	407
MflI	RGATCY	1 cut(s)	148
MhlI	GDGCHC	3 cut(s)	436, 815, 1501
MlyI	GAGTC	1 cut(s)	310
MmeI	TCCRAC	3 cut(s)	447, 757, 1458
MseI	TTAA	3 cut(s)	1218, 1385, 1398
MslI	CAYNNNNRTG	2 cut(s)	447, 638
MspI	CCGG	1 cut(s)	564
MspR9I	CCNGG	4 cut(s)	275, 321, 1248, 1412
MunI	CAATTG	1 cut(s)	407
MvaI	CCWGG	4 cut(s)	275, 321, 1248, 1412
MvnI	CGCG	1 cut(s)	33
MwoI	GCNNNNNNNGC	6 cut(s)	129, 194, 431, 741, 761, 1211
NcoI	CCATGG	1 cut(s)	26
NdeI	CATATG	1 cut(s)	957
NdeII	GATC	2 cut(s)	148, 348
NlaIII	CATG	6 cut(s)	30, 575, 1158, 1242, 1284, 1328
NlaIV	GGNNCC	3 cut(s)	137, 367, 1498
NmeAIII	GCCGAG	1 cut(s)	403
NmuCI	GTSAC	2 cut(s)	179, 724
NspI	RCATGY	1 cut(s)	1284
PaeR7I	CTCGAG	1 cut(s)	352
PagI	TCATGA	1 cut(s)	1324
PaqCI	CACCTGC	1 cut(s)	870
PceI	AGGCCT	1 cut(s)	1205
PfeI	GAWTC	3 cut(s)	909, 1022, 1028
PflMI	CCANNNNNTGG	1 cut(s)	721
PfoI	TCCNGGA	1 cut(s)	319
PinAI	ACCGGT	1 cut(s)	563
PkrI	GCNGC	8 cut(s)	35, 190, 334, 664, 757, 880, 1228, 1279
PleI	GAGTC	1 cut(s)	310
PpsI	GAGTC	1 cut(s)	310
PpuMI	RGGWCCY	1 cut(s)	528
PsiI	TTATAA	1 cut(s)	624
Psp124BI	GAGCTC	1 cut(s)	815
Psp5II	RGGWCCY	1 cut(s)	528
Psp6I	CCWGG	4 cut(s)	273, 319, 1246, 1410
PspGI	CCWGG	4 cut(s)	273, 319, 1246, 1410
PspN4I	GGNNCC	3 cut(s)	137, 367, 1498
PspPI	GGNCC	4 cut(s)	220, 365, 528, 561
PspPPI	RGGWCCY	1 cut(s)	528
PstNI	CAGNNNCTG	3 cut(s)	115, 183, 1417
PsuI	RGATCY	1 cut(s)	148
RsaI	GTAC	1 cut(s)	1292
RsaNI	GTAC	1 cut(s)	1291
RseI	CAYNNNNRTG	2 cut(s)	447, 638
Rsr2I	CGGWCCG	1 cut(s)	561
RsrII	CGGWCCG	1 cut(s)	561
SacI	GAGCTC	1 cut(s)	815
SaqAI	TTAA	3 cut(s)	1218, 1385, 1398
SatI	GCNGC	8 cut(s)	34, 189, 333, 663, 756, 879, 1227, 1278
Sau3AI	GATC	2 cut(s)	148, 348
Sau96I	GGNCC	4 cut(s)	220, 365, 528, 561
SchI	GAGTC	1 cut(s)	310
ScrFI	CCNGG	4 cut(s)	275, 321, 1248, 1412
SduI	GDGCHC	3 cut(s)	436, 815, 1501
SfcI	CTRYAG	1 cut(s)	943
Sfr274I	CTCGAG	1 cut(s)	352
SinI	GGWCC	3 cut(s)	220, 528, 561
SlaI	CTCGAG	1 cut(s)	352
SmiMI	CAYNNNNRTG	2 cut(s)	447, 638
SmlI	CTYRAG	2 cut(s)	152, 352
SmoI	CTYRAG	2 cut(s)	152, 352
SseBI	AGGCCT	1 cut(s)	1205
SsiI	CCGC	4 cut(s)	33, 121, 191, 1199
SspMI	CTAG	3 cut(s)	48, 86, 198
SstI	GAGCTC	1 cut(s)	815
StuI	AGGCCT	1 cut(s)	1205
StyD4I	CCNGG	4 cut(s)	273, 319, 1246, 1410
StyI	CCWWGG	3 cut(s)	26, 628, 771
TaiI	ACGT	3 cut(s)	207, 287, 330
TaqI	TCGA	2 cut(s)	353, 914
TatI	WGTACW	1 cut(s)	1290
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	3 cut(s)	909, 1022, 1028
Tru1I	TTAA	3 cut(s)	1218, 1385, 1398
Tru9I	TTAA	3 cut(s)	1218, 1385, 1398
TscAI	CASTG	1 cut(s)	188
TseFI	GTSAC	2 cut(s)	179, 724
TseI	GCWGC	7 cut(s)	188, 332, 662, 755, 878, 1226, 1277
Tsp45I	GTSAC	2 cut(s)	179, 724
TspDTI	ATGAA	6 cut(s)	220, 312, 387, 512, 861, 1341
TspGWI	ACGGA	3 cut(s)	233, 1320, 1485
TspRI	CASTG	1 cut(s)	188
Van91I	CCANNNNNTGG	1 cut(s)	721
VpaK11BI	GGWCC	3 cut(s)	220, 528, 561
XapI	RAATTY	3 cut(s)	916, 928, 1461
XceI	RCATGY	1 cut(s)	1284
XhoI	CTCGAG	1 cut(s)	352
XspI	CTAG	3 cut(s)	48, 86, 198
ZraI	GACGTC	1 cut(s)	205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.