Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000764

Physical Location & Seq

Genomic Coordinates Forward (+)

9151940 .. 9156906

Gene Structure 4967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G21390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3657 bp

ATGCTGACCAAGTTCGAGACCAAGAGTAACCGAGTTAAGGGTCTGAGTTTCCACCCTAAACGACCATGGATTCTCGCGAGTTTACACAGTGGTGTGATCCAGCTCTGGGATTATCGTATGGGTACTTTGATCGACAGATTTGATGAGCACGAAGGACCTGTTCGTGGTGTTCATTTCCACAACTCACAGCCTTTATTCGTCTCTGGAGGGGATGATTACAAGATTAAAGTTTGGAACTACAAAACTCACAGGTGTCTTTTCACTCTTCTCGGGCATCTTGATTATATCCGCACTGTCCAATTTCACCACGAAAACCCATGGATTGTGAGTGCTAGTGACGATCAGACTATCCGCATTTGGAACTGGCAGTCTAGGACTTGTATTTCCGTGTTGACTGGTCACAATCATTATGTTATGTGTGCTTCTTTCCATCCAAAGGAAGATCTTGTTGTATCAGCATCACTGGATCAGACTGTCCGTGTTTGGGACATTGGTGCTCTTAAGAAGAAGTCAGCATCTCCTGCTGATGACCTCATGCGATTTAGTCAGATGAATTCTGATCTTTTTGGAGGGGTTGACGCTATAGTTAAGTACGTCCTTGAAGGTCATGATAGAGGAGTCAACTGGGCTTCTTTTCATCCCACACTTCCTCTCATTGTCTCTGGTGCCGATGACCGCCAAGTAAAGCTGTGGCGTATGAATGAAACTAAAGCTTGGGAGGTGGATACATTGCGAGGTCATATGAATAACGTTTCATCCGTTATGTTCCATGCAAAACAGGACATTATCGTGTCAAACTCTGAGGATAAAAGCATCCGTGTCTGGGATGCTACCAAGCGAACTGGAATCCAAACTTTTCGTCGTGAGCATGACCGATTCTGGATTCTTGCAGTTCACCCTGAGATTAATCTACTTGCAGCAGGACATGACAATGGTATGATTGTTTTCAAACTTGAGAGAGAACGTCCTGCATTTGCTTTGAGTGGTGATTCGTTATTCTATGCCAAAGATAGATTTCTGCGGTACTATGAATATTCAACTCAAAAAGATTCCCAAGTTATTCCTATACGGCGTCCTGGTACCCCAAGCTTGAATCAAAGTCCGAGGACTTTATCCTACAGTCCGACAGAAAATGCAGTCTTAATCTGCTCAGATCTGGATGGTGGTTCTTACGAGTTGTACATCATACCGAAAGATAGCGTTGGCAGGAGTGATGTTGTACAAGATGCAAAGAGGGGGACAGGGGGTTCTGCGGTGTTCATTGCTCGAAATCGGTTTGCTGTTCTGGAGAAAAGCACCAGCCAGGTGTTAGTGAAGAATCTAAAGAATGAGGTGGTTAAAAAGAGTTCTTTACCTATTCCCACAGATGCTATCTTTTATGCTGGGACTGGAAATTTGCTTTGTAGATCTGAGGATAAAGTGGTTATATTTGACCTTCAACAAAGGCTTGTTCTTGGTGAGCTTCAGACACCGTTTGTTAGGTACGTTGTTTGGTCTAACGATATGGAGAGTGTTGCTTTGCTCAGCAAACATACTATCATTATTGCGAGCAAAAAACTTGTCCTACAGTGCACGCTTCATGAGACAATACGTGTGAAAAGTGGAGCATGGGACGACAATGGTGTCTTCATTTACACTACTCTGAACCACATCAAGTACTGTCTGCCTAATGGAGATAGTGGAATCATCAGAACCCTGGATGTCCCAATCTACATCACCAAGGTGTCTGGAAATACAATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCTATCACCATTAATGCAACCGAATACATTTTCAAGCTTGCACTACTGAGAAAGAAATATGATCATGTCATGAGCATGATAAAGAACTCCCAGCTATGTGGACAGGCTATGATCGCTTATCTTCAGCAGAAAGGATTTCCTGAAGTTGCCCTACACTTTGTTGAAGACGAGAGGATCCGATTCAACTTGGCTCTTGAAAGTGGCAACATCAGTGTAGCTGTTGCATCCGCTACAGAGATTAATGAGAAAGACCACTGGTATAGACTCGGAGTGGAAGCTCTTCGTCAAGGAAATTCTAGAATTGTTGAGTTTGCGTACCAGCAGACAAAGAACTTTGAGAGGTTATCTTTTCTATATCTCATTACTGGCAATTTAGACAAGCTGTCAAAGTTGATGAAGATTGCAGAGGTGAAGAACAATGTAATGGGTCAGTTTCACAATGCACTCTACCTAGGAGATGTTAAAGAGCGTGTTAAGATACTAGAGAATGCTGGTCATTTGCCTCTAGCTTATATCACAGCTTCGGTTCATGGTTTAACTGACATTGCTGAGCGACTAGCAATTGAGCTAGGAGACAATGTGCCTTCATTGCCTGAAGGGAAGACTCCATCGCTTTTAATGCCACCGTCTCCCATCATGTGTGGTGGTGATTGGCCTCTACTGAGAGTGATGAAAGGAATATTTGAAGGAGGACTTGAGAGTGCAAACAGAGGGGCTGTTGATGAAGAAGAAGAAGATGTTGAAGGCGACTGGGGTGAGGGACTTGACAAATTCGATGTTGATGGAATGGAGAACACAGACATCGAAGCCATATTGGATGGTGCAGAAGCAGGTGAAGAAGAAGACGACGAGGAAGGTGGATGGGGACTTGACTTGGATCTTCCACCAGAGCTTGACACTCCTAAAGCCTCTGCTAACGCACGTTCATCTACTTTTGTGACACCTCCTCAAGGTATGCCCGTAAGTCAGATTTGGAGTCAGAAATCTTCCCTTGCTGCTGAGCAGGCTGCAGCAGGAAGCTTCGACACTGCAATGCGTTTGCTCCACAGGCAGCTTGGCATTAAGAACTTTGCGCCTTTGAAATCGATGTTTCTTGATCTGTTCAGTGGGAGCCATAGCTATCTGCGTGCCTTTTCTTCATCTCCTGTGGTTCCTCTTGCCATTGAGCGTGGATGGAGTGAGTCTTCCAGTCCTAACGTCCGTGGCCCGCCAGCTCTTGTTTTTGATTTCTCTCAGCTTGAAGCAAAGCTCAAATCCGGCTACAAAGCTACAACAGCTGGGAAACTATCTGAGGCTCTTCGTGTCTTCCTCTCTATTCTCCAAACCATCCCATTGGTGGTAGTTGAGTCAAGAAGAGAAGTAGATGAGGTTAAGGAACTGGTCATCATTGTTAAAGAATATGTCCTCGGTCTTCAATTGGAGCTCAAGAGGAGAGAGATGAAAGATGATCCGGTGAGGCAGCAAGAGCTCGCTGCTTACTTCACTCACTGTAAACTTCAAACACCTCACCTACGGCTCGCGTACTTCAGTGCAATGACCGTCTGCTACAAGTCAAAGAACATGGCTACTGCTGCTCACTTCGCCAGAAGTTTGTTGGATACAAACCCAACTATTGAGAGCCAGGCCAGGACGGCTAGACAAGTTATGCAAGCAGCTGAACGCAACATGACAGATGCAACAACACTCAACTACGACTTTAGAAACCCGTTTGTGATATGCGGGTCCACTTATGTGCCAATCTACAAAGGACAGAAAGACGTTGCATGTCCTTACTGCACTGCCCGGTTTGTACCAAGCCAGGAAGGTAACATTTGCTCGGTCTGTGATCTTGCAGTCATTGGCGCAGACGCATCTGGCTTGCTATGCTCTGCCTCTCAAGTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006886 GO:0006888 GO:0006890 GO:0006891 GO:0008104 GO:0008150 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0030117 GO:0030120 GO:0030126 GO:0030135 GO:0030137 GO:0030659 GO:0030660 GO:0030662 GO:0030663 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COPI_C Coatomer_WDAD WD40

Protein Analysis

1218

Amino Acids

136.47

Weight (kDa)

6.45

Isoelectric Point (pI)

37.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR36-Utp21_1st	PF25171	2 - 79	1.8e-08	WDR36/Utp21 first beta-propeller
Beta-prop_WDR5	PF25175	3 - 89	2.8e-11	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	4 - 164	1.2e-33	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	4 - 162	1.6e-16	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	6 - 127	4.3e-19	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	10 - 82	2.1e-06	WDR3 second beta-propeller domain
WDR55	PF24796	11 - 171	4.6e-14	WDR55
Beta-prop_EML_2	PF23414	13 - 265	4e-20	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	26 - 122	5.5e-08	G protein beta WD-40 repeat protein
WD40	PF00400	42 - 79	4.2e-06	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	48 - 168	8.5e-10	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR41	PF25178	49 - 163	5.2e-06	WDR41
Beta-prop_WDR36-Utp21_2nd	PF25168	49 - 165	1e-17	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML	PF23409	49 - 164	2.6e-07	Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st	PF24817	52 - 129	8.1e-11	WDHD1 first WD40 domain
WD40_Prp19	PF24814	60 - 167	9.4e-22	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	63 - 166	1.1e-08	TEP-1 second beta-propeller
Beta-prop_SCAP	PF24017	66 - 165	6.8e-06	SCAP Beta-propeller
Beta-prop_WDR5	PF25175	72 - 165	7.7e-28	WDR5 beta-propeller domain
WD40	PF00400	84 - 121	6.8e-09	WD domain, G-beta repeat
EIF3I	PF24805	88 - 166	1.5e-06	EIF3I
Beta-prop_WDR3_2nd	PF25172	88 - 163	2.3e-09	WDR3 second beta-propeller domain
Beta-prop_EIPR1	PF23609	90 - 162	1e-06	EIPR1 beta-propeller
WD40_Gbeta	PF25391	91 - 164	8.8e-06	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	96 - 166	3.2e-13	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	107 - 168	6.7e-13	THOC3 beta-propeller domain
WD40	PF00400	126 - 163	1.1e-09	WD domain, G-beta repeat
Beta-prop_WDR3_1st	PF25173	195 - 316	1.6e-19	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	196 - 301	7.8e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5	PF25175	196 - 314	9.7e-21	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	197 - 291	7.6e-07	TEP-1 second beta-propeller
WD40	PF00400	198 - 231	3.2e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	198 - 314	1.1e-18	Prp19 WD40 domain
EIF3I	PF24805	199 - 287	9.1e-06	EIF3I
Beta-prop_WDR3_2nd	PF25172	202 - 318	1.4e-11	WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	206 - 316	2.4e-06	WDR36/Utp21 second beta-propeller domain
WDR55	PF24796	207 - 315	5.6e-10	WDR55
Beta-prop_THOC3	PF25174	207 - 316	1.6e-15	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	211 - 287	4.3e-10	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	223 - 317	1.3e-07	CDC20/Fizzy WD40 domain
WD40	PF00400	241 - 276	6.2e-06	WD domain, G-beta repeat
B-prop_COPA_B_2nd	PF04053	340 - 584	1.5e-70	COPA/B second beta-propeller
TPR_COPA_B	PF23953	605 - 767	9e-20	COPA/B TPR domain
COPI_C	PF06957	815 - 1218	8.2e-164	Coatomer (COPI) alpha subunit C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62020 AT2G21390
fragaria_vesca	FvH4_3g10280 FvH4_5g12340 FvH4_5g12340 FvH4_5g12391 FvH4_5g12420
malus_domestica	MD05G1271000.v1.1 MD06G1214600.v1.1 MD10G1248600.v1.1 MD10G1248700.v1.1 MD10G1248800.v1.1 MD10G1249800.v1.1 MD10G1249900.v1.1 MD10G1250100.v1.1 MD10G1250200.v1.1 MD10G1250400.v1.1 MD10G1250600.v1.1 MD10G1250700.v1.1 MD10G1251000.v1.1 MD10G1251300.v1.1 MD10G1251600.v1.1 MD14G1225500.v1.1
prunus_persica	Prupe.4G091800_v2.0.a1 Prupe.4G091800_v2.0.a1 Prupe.5G220000_v2.0.a1 Prupe.5G220000_v2.0.a1
pyrus_communis	pycom05g25340 pycom06g19120 pycom10g20750 pycom14g18670
rosa_chinensis	RchiOBHm_Chr5g0016541 RchiOBHm_Chr7g0185121 RchiOBHm_Chr7g0185201
rosa_laevigata	RLG00000000634 RLG00000000671 RLG00000001958 RLG00000004933 RLG00000032256
rosa_multiflora	Rmu_co8505923.1_g000001 Rmu_co8507327.1_g000001 Rmu_sc0001235.1_g000018 Rmu_sc0004765.1_g000006 Rmu_sc0007192.1_g000011 Rmu_sc0019416.1_g000003 Rmu_ssc0000398.1_g000013
rosa_roxburghii	Rroxscaffold_1G00060340 Rroxscaffold_3G00269160 Rroxscaffold_3G00269190
rosa_rugosa	Rorug05G0032700 Rorug06G0466700 Rorug06G0466700 Rorug06G0466800 Rorug07G0188600
rosa_samantha	Rh4BG061900 Rh4CG068200 Rh4DG290700 Rh5AG127000 Rh5AG459900 Rh5BG125900 Rh5CG098400 Rh5CG138600 Rh5DG126100 Rh7AG076100 Rh7BG071200 Rh7CG072400 Rh7DG071500 Rh7DG071900
rosa_wichuraiana	Rw5G011000 Rw7G005980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2591
AasI	GACNNNNNNGTC	1 cut(s)	1622
Acc36I	ACCTGC	1 cut(s)	2591
Acc65I	GGTACC	1 cut(s)	1079
AccB1I	GGYRCC	2 cut(s)	665, 1079
AccII	CGCG	2 cut(s)	77, 3290
AciI	CCGC	8 cut(s)	289, 352, 676, 1021, 1253, 1998, 2978, 3489
AclI	AACGTT	1 cut(s)	750
AclWI	GGATC	6 cut(s)	91, 474, 1939, 1952, 2655, 3212
AcsI	RAATTY	4 cut(s)	553, 1393, 2062, 2540
AcuI	CTGAAG	5 cut(s)	1448, 1877, 1932, 2385, 3280
AcyI	GRCGYC	1 cut(s)	1072
AfiI	CCNNNNNNNGG	8 cut(s)	37, 106, 164, 436, 484, 823, 2720, 3106
AflII	CTTAAG	1 cut(s)	500
AflIII	ACRYGT	1 cut(s)	1591
AhdI	GACNNNNNGTC	1 cut(s)	2152
AjnI	CCWGG	6 cut(s)	1075, 1302, 1695, 3390, 3395, 3567
AleI	CACNNNNGTG	3 cut(s)	90, 1721, 3500
AloI	GAACNNNNNNTCC	2 cut(s)	1231, 1263
Alw21I	GWGCWC	5 cut(s)	150, 499, 1574, 3195, 3240
Alw26I	GTCTC	6 cut(s)	11, 205, 664, 1577, 2337, 2403
Alw44I	GTGCAC	1 cut(s)	1570
AlwI	GGATC	6 cut(s)	91, 474, 1939, 1952, 2655, 3212
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	3 cut(s)	2423, 2974, 3393
ApaLI	GTGCAC	1 cut(s)	1570
ApeKI	GCWGC	9 cut(s)	917, 2765, 2777, 2780, 2821, 3229, 3242, 3341, 3422
ApoI	RAATTY	4 cut(s)	553, 1393, 2062, 2540
ArsI	GACNNNNNNTTYG	6 cut(s)	844, 876, 1378, 1410, 1545, 1577
AseI	ATTAAT	3 cut(s)	906, 1782, 2010
Asp700I	GAANNNNTTC	1 cut(s)	2049
Asp718I	GGTACC	1 cut(s)	1079
AspA2I	CCTAGG	1 cut(s)	2221
AspLEI	GCGC	2 cut(s)	2845, 3614
AspS9I	GGNCC	4 cut(s)	155, 1750, 2975, 3492
AsuC2I	CCSGG	2 cut(s)	1754, 3553
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	3 cut(s)	155, 1750, 3492
AvrII	CCTAGG	1 cut(s)	2221
BaeGI	GKGCMC	1 cut(s)	1574
BamHI	GGATCC	1 cut(s)	1944
BanI	GGYRCC	2 cut(s)	665, 1079
BanII	GRGCYC	2 cut(s)	3195, 3240
BarI	GAAGNNNNNNTAC	2 cut(s)	1905, 1937
BbsI	GAAGAC	7 cut(s)	1618, 1941, 2378, 2619, 2946, 3067, 3173
Bbv12I	GWGCWC	5 cut(s)	150, 499, 1574, 3195, 3240
BbvI	GCAGC	9 cut(s)	929, 2752, 2764, 2792, 2833, 3229, 3241, 3328, 3434
BceAI	ACGGC	3 cut(s)	1085, 3299, 3417
BciT130I	CCWGG	6 cut(s)	1077, 1304, 1697, 3392, 3397, 3569
BciVI	GTATCC	2 cut(s)	718, 3361
BclI	TGATCA	1 cut(s)	1831
BcnI	CCSGG	2 cut(s)	1754, 3553
BcoDI	GTCTC	6 cut(s)	11, 205, 664, 1577, 2337, 2403
BfaI	CTAG	9 cut(s)	333, 372, 2067, 2222, 2252, 2276, 2327, 2339, 3405
BfmI	CTRYAG	5 cut(s)	582, 1117, 1565, 2001, 2778
BfrI	CTTAAG	1 cut(s)	500
BfuAI	ACCTGC	1 cut(s)	2591
BfuI	GTATCC	2 cut(s)	718, 3361
BglI	GCCNNNNNGGC	1 cut(s)	3401
BglII	AGATCT	3 cut(s)	442, 1153, 1406
BisI	GCNGC	9 cut(s)	918, 2766, 2778, 2781, 2822, 3230, 3243, 3342, 3423
BlnI	CCTAGG	1 cut(s)	2221
BlpI	GCTNAGC	3 cut(s)	1523, 2319, 2769
BlsI	GCNGC	9 cut(s)	919, 2767, 2779, 2782, 2823, 3231, 3244, 3343, 3424
BmcAI	AGTACT	1 cut(s)	1658
Bme1390I	CCNGG	8 cut(s)	1077, 1304, 1697, 1754, 3392, 3397, 3553, 3569
Bme18I	GGWCC	3 cut(s)	155, 1750, 3492
BmeRI	GACNNNNNGTC	1 cut(s)	2152
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	4 cut(s)	155, 1750, 2975, 3492
BmiI	GGNNCC	6 cut(s)	667, 1081, 1946, 2882, 2922, 3493
BmrFI	CCNGG	8 cut(s)	1077, 1304, 1697, 1754, 3392, 3397, 3553, 3569
BmrI	ACTGGG	2 cut(s)	634, 2530
BmuI	ACTGGG	2 cut(s)	634, 2530
BpiI	GAAGAC	7 cut(s)	1618, 1941, 2378, 2619, 2946, 3067, 3173
BpmI	CTGGAG	2 cut(s)	225, 1307
Bpu1102I	GCTNAGC	3 cut(s)	1523, 2319, 2769
BpuEI	CTTGAG	5 cut(s)	974, 2486, 2703, 3179, 3630
BpuMI	CCSGG	2 cut(s)	1754, 3553
Bsa29I	ATCGAT	1 cut(s)	2855
BsaAI	YACGTR	1 cut(s)	1592
BsaHI	GRCGYC	1 cut(s)	1072
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	8 cut(s)	65, 317, 1103, 1695, 1719, 2221, 2971, 3175
BsaWI	WCCGGW	2 cut(s)	3220, 3651
BsaXI	ACNNNNNCTCC	2 cut(s)	2334, 2364
Bsc4I	CCNNNNNNNGG	8 cut(s)	37, 106, 164, 436, 484, 823, 2720, 3106
Bse3DI	GCAATG	6 cut(s)	728, 1260, 2313, 2357, 2808, 3309
BseBI	CCWGG	6 cut(s)	1077, 1304, 1697, 3392, 3397, 3569
BseCI	ATCGAT	1 cut(s)	2855
BseDI	CCNNGG	8 cut(s)	65, 317, 1103, 1695, 1719, 2221, 2971, 3175
BseLI	CCNNNNNNNGG	8 cut(s)	37, 106, 164, 436, 484, 823, 2720, 3106
BseMI	GCAATG	6 cut(s)	728, 1260, 2313, 2357, 2808, 3309
BseRI	GAGGAG	3 cut(s)	630, 2706, 3214
BseSI	GKGCMC	1 cut(s)	1574
BseXI	GCAGC	9 cut(s)	929, 2752, 2764, 2792, 2833, 3229, 3241, 3328, 3434
BseYI	CCCAGC	3 cut(s)	1382, 1860, 3047
BsgI	GTGCAG	2 cut(s)	2613, 3529
Bsh1236I	CGCG	2 cut(s)	77, 3290
BshFI	GGCC	3 cut(s)	2425, 2976, 3395
BshNI	GGYRCC	2 cut(s)	665, 1079
BshVI	ATCGAT	1 cut(s)	2855
BsiHKAI	GWGCWC	5 cut(s)	150, 499, 1574, 3195, 3240
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	5 cut(s)	1753, 3027, 3221, 3553, 3652
BslFI	GGGAC	7 cut(s)	500, 1252, 1399, 1625, 1688, 2544, 2649
BslI	CCNNNNNNNGG	8 cut(s)	37, 106, 164, 436, 484, 823, 2720, 3106
BsmAI	GTCTC	6 cut(s)	11, 205, 664, 1577, 2337, 2403
BsmBI	CGTCTC	2 cut(s)	205, 2403
BsmFI	GGGAC	7 cut(s)	500, 1252, 1399, 1625, 1688, 2544, 2649
BsmI	GAATGC	1 cut(s)	2263
BsnI	GGCC	3 cut(s)	2425, 2976, 3395
Bso31I	GGTCTC	1 cut(s)	11
BsoBI	CYCGRG	1 cut(s)	269
Bsp1286I	GDGCHC	5 cut(s)	150, 499, 1574, 3195, 3240
Bsp1407I	TGTACA	2 cut(s)	1179, 1219
Bsp1720I	GCTNAGC	3 cut(s)	1523, 2319, 2769
Bsp19I	CCATGG	2 cut(s)	65, 317
Bsp68I	TCGCGA	1 cut(s)	77
BspACI	CCGC	8 cut(s)	289, 352, 676, 1021, 1253, 1998, 2978, 3489
BspANI	GGCC	3 cut(s)	2425, 2976, 3395
BspDI	ATCGAT	1 cut(s)	2855
BspFNI	CGCG	2 cut(s)	77, 3290
BspHI	TCATGA	3 cut(s)	607, 1579, 1839
BspLI	GGNNCC	6 cut(s)	667, 1081, 1946, 2882, 2922, 3493
BspMAI	CTGCAG	1 cut(s)	2782
BspMI	ACCTGC	1 cut(s)	2591
BspPI	GGATC	6 cut(s)	91, 474, 1939, 1952, 2655, 3212
BspQI	GCTCTTC	2 cut(s)	2055, 3072
BspT107I	GGYRCC	2 cut(s)	665, 1079
BspTI	CTTAAG	1 cut(s)	500
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	6 cut(s)	728, 1260, 2313, 2357, 2808, 3309
BsrGI	TGTACA	2 cut(s)	1179, 1219
BssECI	CCNNGG	8 cut(s)	65, 317, 1103, 1695, 1719, 2221, 2971, 3175
BssNI	GRCGYC	1 cut(s)	1072
BssT1I	CCWWGG	4 cut(s)	65, 317, 1719, 2221
Bst2UI	CCWGG	6 cut(s)	1077, 1304, 1697, 3392, 3397, 3569
Bst6I	CTCTTC	4 cut(s)	270, 2055, 3072, 3118
BstACI	GRCGYC	1 cut(s)	1072
BstAFI	CTTAAG	1 cut(s)	500
BstAPI	GCANNNNNTGC	1 cut(s)	521
BstAUI	TGTACA	2 cut(s)	1179, 1219
BstBAI	YACGTR	1 cut(s)	1592
BstDSI	CCRYGG	3 cut(s)	65, 317, 2971
BstENI	CCTNNNNNAGG	1 cut(s)	2718
BstFNI	CGCG	2 cut(s)	77, 3290
BstHHI	GCGC	2 cut(s)	2845, 3614
BstMAI	GTCTC	6 cut(s)	11, 205, 664, 1577, 2337, 2403
BstNI	CCWGG	6 cut(s)	1077, 1304, 1697, 3392, 3397, 3569
BstNSI	RCATGY	1 cut(s)	3537
BstSCI	CCNGG	8 cut(s)	1075, 1302, 1695, 1752, 3390, 3395, 3551, 3567
BstSFI	CTRYAG	5 cut(s)	582, 1117, 1565, 2001, 2778
BstSLI	GKGCMC	1 cut(s)	1574
BstUI	CGCG	2 cut(s)	77, 3290
BstV1I	GCAGC	9 cut(s)	929, 2752, 2764, 2792, 2833, 3229, 3241, 3328, 3434
BstV2I	GAAGAC	7 cut(s)	1618, 1941, 2378, 2619, 2946, 3067, 3173
BstX2I	RGATCY	5 cut(s)	442, 1153, 1406, 1944, 2647
BstXI	CCANNNNNNTGG	2 cut(s)	1868, 3103
BstYI	RGATCY	5 cut(s)	442, 1153, 1406, 1944, 2647
Bsu15I	ATCGAT	1 cut(s)	2855
BsuI	GTATCC	2 cut(s)	718, 3361
BsuRI	GGCC	3 cut(s)	2425, 2976, 3395
BsuTUI	ATCGAT	1 cut(s)	2855
BtgI	CCRYGG	3 cut(s)	65, 317, 2971
BtgZI	GCGATG	1 cut(s)	2364
BtsI	GCAGTG	2 cut(s)	2796, 3546
BtuMI	TCGCGA	1 cut(s)	77
BveI	ACCTGC	1 cut(s)	2591
CciI	TCATGA	3 cut(s)	607, 1579, 1839
CfoI	GCGC	2 cut(s)	2845, 3614
Cfr13I	GGNCC	4 cut(s)	155, 1750, 2975, 3492
ClaI	ATCGAT	1 cut(s)	2855
CseI	GACGC	3 cut(s)	587, 1061, 3626
DrdI	GACNNNNNNGTC	1 cut(s)	1622
DriI	GACNNNNNGTC	1 cut(s)	2152
DseDI	GACNNNNNNGTC	1 cut(s)	1622
Eam1104I	CTCTTC	4 cut(s)	270, 2055, 3072, 3118
Eam1105I	GACNNNNNGTC	1 cut(s)	2152
EarI	CTCTTC	4 cut(s)	270, 2055, 3072, 3118
Ecl136II	GAGCTC	2 cut(s)	3193, 3238
Eco130I	CCWWGG	4 cut(s)	65, 317, 1719, 2221
Eco24I	GRGCYC	2 cut(s)	3195, 3240
Eco31I	GGTCTC	1 cut(s)	11
Eco47I	GGWCC	3 cut(s)	155, 1750, 3492
Eco53kI	GAGCTC	2 cut(s)	3193, 3238
Eco57I	CTGAAG	5 cut(s)	1448, 1877, 1932, 2385, 3280
Eco88I	CYCGRG	1 cut(s)	269
EcoICRI	GAGCTC	2 cut(s)	3193, 3238
EcoNI	CCTNNNNNAGG	1 cut(s)	2718
EcoO109I	RGGNCCY	1 cut(s)	155
EcoRI	GAATTC	1 cut(s)	553
EcoRII	CCWGG	6 cut(s)	1075, 1302, 1695, 3390, 3395, 3567
EcoT14I	CCWWGG	4 cut(s)	65, 317, 1719, 2221
EcoT38I	GRGCYC	2 cut(s)	3195, 3240
ErhI	CCWWGG	4 cut(s)	65, 317, 1719, 2221
Esp3I	CGTCTC	2 cut(s)	205, 2403
FalI	AAGNNNNNCTT	2 cut(s)	2448, 2480
FaqI	GGGAC	7 cut(s)	500, 1252, 1399, 1625, 1688, 2544, 2649
FauI	CCCGC	2 cut(s)	2985, 3482
FauNDI	CATATG	1 cut(s)	741
FbaI	TGATCA	1 cut(s)	1831
Fnu4HI	GCNGC	9 cut(s)	918, 2766, 2778, 2781, 2822, 3230, 3243, 3342, 3423
FriOI	GRGCYC	2 cut(s)	3195, 3240
Fsp4HI	GCNGC	9 cut(s)	918, 2766, 2778, 2781, 2822, 3230, 3243, 3342, 3423
FspBI	CTAG	9 cut(s)	333, 372, 2067, 2222, 2252, 2276, 2327, 2339, 3405
GlaI	GCGC	2 cut(s)	2844, 3613
GluI	GCNGC	9 cut(s)	918, 2766, 2778, 2781, 2822, 3230, 3243, 3342, 3423
GsaI	CCCAGC	3 cut(s)	1386, 1864, 3051
GsuI	CTGGAG	2 cut(s)	225, 1307
HaeIII	GGCC	3 cut(s)	2425, 2976, 3395
HapII	CCGG	5 cut(s)	1753, 3027, 3221, 3553, 3652
HgaI	GACGC	3 cut(s)	587, 1061, 3626
HhaI	GCGC	2 cut(s)	2845, 3614
Hin1I	GRCGYC	1 cut(s)	1072
Hin6I	GCGC	2 cut(s)	2843, 3612
HinP1I	GCGC	2 cut(s)	2843, 3612
HincII	GTYRAC	3 cut(s)	393, 577, 622
HindII	GTYRAC	3 cut(s)	393, 577, 622
HindIII	AAGCTT	4 cut(s)	711, 1087, 1805, 2788
HpaII	CCGG	5 cut(s)	1753, 3027, 3221, 3553, 3652
Hpy166II	GTNNAC	9 cut(s)	83, 393, 577, 622, 895, 1572, 1871, 3263, 3495
Hpy8I	GTNNAC	9 cut(s)	83, 393, 577, 622, 895, 1572, 1871, 3263, 3495
Hpy99I	CGWCG	2 cut(s)	864, 2621
HpyAV	CCTTC	9 cut(s)	146, 596, 1445, 2360, 2364, 2450, 2507, 2618, 3566
HpyCH4IV	ACGT	8 cut(s)	594, 750, 964, 1485, 1591, 2692, 2967, 3528
HpySE526I	ACGT	8 cut(s)	594, 750, 964, 1485, 1591, 2692, 2967, 3528
Hsp92I	GRCGYC	1 cut(s)	1072
HspAI	GCGC	2 cut(s)	2843, 3612
KpnI	GGTACC	1 cut(s)	1083
Ksp22I	TGATCA	1 cut(s)	1831
LguI	GCTCTTC	2 cut(s)	2055, 3072
LmnI	GCTCC	4 cut(s)	1604, 2817, 2880, 3190
Lsp1109I	GCAGC	9 cut(s)	929, 2752, 2764, 2792, 2833, 3229, 3241, 3328, 3434
MaeI	CTAG	9 cut(s)	333, 372, 2067, 2222, 2252, 2276, 2327, 2339, 3405
MaeII	ACGT	8 cut(s)	594, 750, 964, 1485, 1591, 2692, 2967, 3528
MaeIII	GTNAC	5 cut(s)	26, 335, 398, 2707, 3575
MfeI	CAATTG	2 cut(s)	2331, 3185
MflI	RGATCY	5 cut(s)	442, 1153, 1406, 1944, 2647
MhlI	GDGCHC	5 cut(s)	150, 499, 1574, 3195, 3240
MluCI	AATT	9 cut(s)	299, 553, 1393, 2062, 2070, 2140, 2331, 2540, 3185
MlyI	GAGTC	6 cut(s)	627, 2028, 2368, 2755, 2960, 3125
MmeI	TCCRAC	2 cut(s)	1148, 3345
MroXI	GAANNNNTTC	1 cut(s)	2049
MslI	CAYNNNNRTG	7 cut(s)	90, 788, 930, 1721, 1844, 2801, 3500
MspA1I	CMGCKG	2 cut(s)	3047, 3425
MspCI	CTTAAG	1 cut(s)	500
MspI	CCGG	5 cut(s)	1753, 3027, 3221, 3553, 3652
MspR9I	CCNGG	8 cut(s)	1077, 1304, 1697, 1754, 3392, 3397, 3553, 3569
MunI	CAATTG	2 cut(s)	2331, 3185
Mva1269I	GAATGC	1 cut(s)	2263
MvaI	CCWGG	6 cut(s)	1077, 1304, 1697, 3392, 3397, 3569
MvnI	CGCG	2 cut(s)	77, 3290
NciI	CCSGG	2 cut(s)	1754, 3553
NcoI	CCATGG	2 cut(s)	65, 317
NdeI	CATATG	1 cut(s)	741
NlaIV	GGNNCC	6 cut(s)	667, 1081, 1946, 2882, 2922, 3493
NmuCI	GTSAC	3 cut(s)	335, 398, 2707
NruI	TCGCGA	1 cut(s)	77
NspI	RCATGY	1 cut(s)	3537
OliI	CACNNNNGTG	3 cut(s)	90, 1721, 3500
PagI	TCATGA	3 cut(s)	607, 1579, 1839
PaqCI	CACCTGC	1 cut(s)	2591
PciSI	GCTCTTC	2 cut(s)	2055, 3072
PcsI	WCGNNNNNNNCGW	1 cut(s)	756
PctI	GAATGC	1 cut(s)	2263
PdmI	GAANNNNTTC	1 cut(s)	2049
PkrI	GCNGC	9 cut(s)	919, 2767, 2779, 2782, 2823, 3231, 3244, 3343, 3424
PleI	GAGTC	6 cut(s)	626, 2028, 2368, 2754, 2959, 3124
PpsI	GAGTC	6 cut(s)	626, 2028, 2368, 2754, 2959, 3124
Ppu21I	YACGTR	1 cut(s)	1592
PpuMI	RGGWCCY	1 cut(s)	155
PshBI	ATTAAT	3 cut(s)	906, 1782, 2010
Psp124BI	GAGCTC	2 cut(s)	3195, 3240
Psp1406I	AACGTT	1 cut(s)	750
Psp5II	RGGWCCY	1 cut(s)	155
Psp6I	CCWGG	6 cut(s)	1075, 1302, 1695, 3390, 3395, 3567
PspFI	CCCAGC	3 cut(s)	1382, 1860, 3047
PspGI	CCWGG	6 cut(s)	1075, 1302, 1695, 3390, 3395, 3567
PspN4I	GGNNCC	6 cut(s)	667, 1081, 1946, 2882, 2922, 3493
PspPI	GGNCC	4 cut(s)	155, 1750, 2975, 3492
PspPPI	RGGWCCY	1 cut(s)	155
PstI	CTGCAG	1 cut(s)	2782
PsuI	RGATCY	5 cut(s)	442, 1153, 1406, 1944, 2647
PvuII	CAGCTG	2 cut(s)	3047, 3425
RruI	TCGCGA	1 cut(s)	77
RseI	CAYNNNNRTG	7 cut(s)	90, 788, 930, 1721, 1844, 2801, 3500
SacI	GAGCTC	2 cut(s)	3195, 3240
SapI	GCTCTTC	2 cut(s)	2055, 3072
SatI	GCNGC	9 cut(s)	918, 2766, 2778, 2781, 2822, 3230, 3243, 3342, 3423
Sau96I	GGNCC	4 cut(s)	155, 1750, 2975, 3492
ScaI	AGTACT	1 cut(s)	1658
SchI	GAGTC	6 cut(s)	627, 2028, 2368, 2755, 2960, 3125
ScrFI	CCNGG	8 cut(s)	1077, 1304, 1697, 1754, 3392, 3397, 3553, 3569
SduI	GDGCHC	5 cut(s)	150, 499, 1574, 3195, 3240
SfcI	CTRYAG	5 cut(s)	582, 1117, 1565, 2001, 2778
SinI	GGWCC	3 cut(s)	155, 1750, 3492
SmiMI	CAYNNNNRTG	7 cut(s)	90, 788, 930, 1721, 1844, 2801, 3500
SmlI	CTYRAG	6 cut(s)	500, 953, 2465, 2718, 3194, 3645
SmoI	CTYRAG	6 cut(s)	500, 953, 2465, 2718, 3194, 3645
Sse9I	AATT	9 cut(s)	299, 553, 1393, 2062, 2070, 2140, 2331, 2540, 3185
SsiI	CCGC	8 cut(s)	289, 352, 676, 1021, 1253, 1998, 2978, 3489
SspI	AATATT	2 cut(s)	1034, 2451
SspMI	CTAG	9 cut(s)	333, 372, 2067, 2222, 2252, 2276, 2327, 2339, 3405
SstI	GAGCTC	2 cut(s)	3195, 3240
StyD4I	CCNGG	8 cut(s)	1075, 1302, 1695, 1752, 3390, 3395, 3551, 3567
StyI	CCWWGG	4 cut(s)	65, 317, 1719, 2221
TaiI	ACGT	8 cut(s)	597, 753, 967, 1488, 1594, 2695, 2970, 3531
TaqI	TCGA	7 cut(s)	15, 132, 1267, 2544, 2574, 2793, 2855
TaqII	GACCGA	3 cut(s)	888, 3167, 3577
TasI	AATT	9 cut(s)	299, 553, 1393, 2062, 2070, 2140, 2331, 2540, 3185
TatI	WGTACW	3 cut(s)	1179, 1219, 1656
TseFI	GTSAC	3 cut(s)	335, 398, 2707
TseI	GCWGC	9 cut(s)	917, 2765, 2777, 2780, 2821, 3229, 3242, 3341, 3422
Tsp45I	GTSAC	3 cut(s)	335, 398, 2707
TspGWI	ACGGA	5 cut(s)	376, 467, 748, 806, 2960
Vha464I	CTTAAG	1 cut(s)	500
VneI	GTGCAC	1 cut(s)	1570
VpaK11BI	GGWCC	3 cut(s)	155, 1750, 3492
VspI	ATTAAT	3 cut(s)	906, 1782, 2010
XagI	CCTNNNNNAGG	1 cut(s)	2718
XapI	RAATTY	4 cut(s)	553, 1393, 2062, 2540
XbaI	TCTAGA	1 cut(s)	2066
XceI	RCATGY	1 cut(s)	3537
XcmI	CCANNNNNNNNNTGG	3 cut(s)	2822, 3103, 3361
XmaJI	CCTAGG	1 cut(s)	2221
XmnI	GAANNNNTTC	1 cut(s)	2049
XspI	CTAG	9 cut(s)	333, 372, 2067, 2222, 2252, 2276, 2327, 2339, 3405
ZrmI	AGTACT	1 cut(s)	1658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.