The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B-prop_COPA_B_2nd | PF04053 | 20 - 94 | 1.8e-09 | COPA/B second beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 201 |
| AccII | CGCG | 1 cut(s) | 242 |
| AciI | CCGC | 1 cut(s) | 242 |
| AcsI | RAATTY | 1 cut(s) | 14 |
| AdeI | CACNNNGTG | 1 cut(s) | 56 |
| AgsI | TTSAA | 2 cut(s) | 73, 269 |
| AluBI | AGCT | 2 cut(s) | 180, 233 |
| AluI | AGCT | 2 cut(s) | 180, 233 |
| Alw21I | GWGCWC | 1 cut(s) | 278 |
| AoxI | GGCC | 1 cut(s) | 226 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| ApoI | RAATTY | 1 cut(s) | 14 |
| AspLEI | GCGC | 1 cut(s) | 202 |
| AspS9I | GGNCC | 1 cut(s) | 227 |
| AsuHPI | GGTGA | 1 cut(s) | 203 |
| Bbv12I | GWGCWC | 1 cut(s) | 278 |
| BbvI | GCAGC | 1 cut(s) | 103 |
| BfmI | CTRYAG | 1 cut(s) | 105 |
| BisI | GCNGC | 2 cut(s) | 117, 243 |
| BlsI | GCNGC | 2 cut(s) | 118, 244 |
| BmgT120I | GGNCC | 1 cut(s) | 227 |
| BseXI | GCAGC | 1 cut(s) | 103 |
| BseYI | CCCAGC | 1 cut(s) | 229 |
| Bsh1236I | CGCG | 1 cut(s) | 242 |
| BshFI | GGCC | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 1 cut(s) | 278 |
| BsnI | GGCC | 1 cut(s) | 228 |
| Bsp1286I | GDGCHC | 1 cut(s) | 278 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 1 cut(s) | 228 |
| BspFNI | CGCG | 1 cut(s) | 242 |
| BstFNI | CGCG | 1 cut(s) | 242 |
| BstHHI | GCGC | 1 cut(s) | 202 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 206, 239 |
| BstSFI | CTRYAG | 1 cut(s) | 105 |
| BstUI | CGCG | 1 cut(s) | 242 |
| BstV1I | GCAGC | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 228 |
| BtsI | GCAGTG | 1 cut(s) | 267 |
| BtsIMutI | CAGTG | 1 cut(s) | 267 |
| CfoI | GCGC | 1 cut(s) | 202 |
| Cfr13I | GGNCC | 1 cut(s) | 227 |
| CviAII | CATG | 1 cut(s) | 9 |
| CviJI | RGCY | 5 cut(s) | 102, 180, 228, 233, 245 |
| CviKI_1 | RGCY | 5 cut(s) | 102, 180, 228, 233, 245 |
| DraIII | CACNNNGTG | 1 cut(s) | 56 |
| FaeI | CATG | 1 cut(s) | 12 |
| FaiI | YATR | 9 cut(s) | 10, 23, 46, 127, 137, 153, 160, 167, 286 |
| FatI | CATG | 1 cut(s) | 8 |
| Fnu4HI | GCNGC | 2 cut(s) | 117, 243 |
| Fsp4HI | GCNGC | 2 cut(s) | 117, 243 |
| FspI | TGCGCA | 1 cut(s) | 201 |
| GlaI | GCGC | 1 cut(s) | 201 |
| GluI | GCNGC | 2 cut(s) | 117, 243 |
| GsaI | CCCAGC | 1 cut(s) | 233 |
| HaeIII | GGCC | 1 cut(s) | 228 |
| HhaI | GCGC | 1 cut(s) | 202 |
| Hin1II | CATG | 1 cut(s) | 12 |
| Hin6I | GCGC | 1 cut(s) | 200 |
| HinP1I | GCGC | 1 cut(s) | 200 |
| HinfI | GANTC | 2 cut(s) | 73, 219 |
| HphI | GGTGA | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 224 |
| HpyAV | CCTTC | 1 cut(s) | 134 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 1 cut(s) | 260 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 206, 239 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| Hsp92II | CATG | 1 cut(s) | 12 |
| HspAI | GCGC | 1 cut(s) | 200 |
| LpnPI | CCDG | 3 cut(s) | 45, 188, 243 |
| Lsp1109I | GCAGC | 1 cut(s) | 103 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MboII | GAAGA | 1 cut(s) | 54 |
| MhlI | GDGCHC | 1 cut(s) | 278 |
| MluCI | AATT | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 90 |
| MnlI | CCTC | 3 cut(s) | 199, 209, 218 |
| MspA1I | CMGCKG | 1 cut(s) | 233 |
| MvnI | CGCG | 1 cut(s) | 242 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 206, 239 |
| NlaIII | CATG | 1 cut(s) | 12 |
| NsbI | TGCGCA | 1 cut(s) | 201 |
| PfeI | GAWTC | 2 cut(s) | 73, 219 |
| PkrI | GCNGC | 2 cut(s) | 118, 244 |
| PspFI | CCCAGC | 1 cut(s) | 229 |
| PspPI | GGNCC | 1 cut(s) | 227 |
| PvuII | CAGCTG | 1 cut(s) | 233 |
| SatI | GCNGC | 2 cut(s) | 117, 243 |
| Sau96I | GGNCC | 1 cut(s) | 227 |
| SduI | GDGCHC | 1 cut(s) | 278 |
| SetI | ASST | 5 cut(s) | 34, 165, 182, 235, 257 |
| SfcI | CTRYAG | 1 cut(s) | 105 |
| Sse9I | AATT | 1 cut(s) | 14 |
| SsiI | CCGC | 1 cut(s) | 242 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TaqI | TCGA | 1 cut(s) | 247 |
| TasI | AATT | 1 cut(s) | 14 |
| TauI | GCSGC | 1 cut(s) | 245 |
| TfiI | GAWTC | 2 cut(s) | 73, 219 |
| TscAI | CASTG | 1 cut(s) | 267 |
| TseI | GCWGC | 1 cut(s) | 116 |
| TspDTI | ATGAA | 1 cut(s) | 168 |
| TspRI | CASTG | 1 cut(s) | 267 |
| XapI | RAATTY | 1 cut(s) | 14 |