The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| COPI_C | PF06957 | 1 - 117 | 8.3e-50 | Coatomer (COPI) alpha subunit C-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 148 |
| AfaI | GTAC | 2 cut(s) | 201, 283 |
| AjnI | CCWGG | 1 cut(s) | 101 |
| AluBI | AGCT | 4 cut(s) | 41, 58, 246, 277 |
| AluI | AGCT | 4 cut(s) | 41, 58, 246, 277 |
| Alw26I | GTCTC | 2 cut(s) | 59, 232 |
| ApeKI | GCWGC | 3 cut(s) | 38, 112, 119 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 183, 216 |
| BbvI | GCAGC | 3 cut(s) | 50, 99, 106 |
| BccI | CCATC | 1 cut(s) | 346 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 300, 334 |
| BciT130I | CCWGG | 1 cut(s) | 103 |
| BcoDI | GTCTC | 2 cut(s) | 59, 232 |
| BfmI | CTRYAG | 4 cut(s) | 36, 113, 120, 241 |
| BisI | GCNGC | 3 cut(s) | 39, 113, 120 |
| BlsI | GCNGC | 3 cut(s) | 40, 114, 121 |
| Bme1390I | CCNGG | 1 cut(s) | 103 |
| BmrFI | CCNGG | 1 cut(s) | 103 |
| BmsI | GCATC | 2 cut(s) | 130, 304 |
| BsaJI | CCNNGG | 2 cut(s) | 101, 211 |
| BseBI | CCWGG | 1 cut(s) | 103 |
| BseDI | CCNNGG | 2 cut(s) | 101, 211 |
| BseGI | GGATG | 1 cut(s) | 229 |
| BseXI | GCAGC | 3 cut(s) | 50, 99, 106 |
| BsgI | GTGCAG | 1 cut(s) | 330 |
| BsmAI | GTCTC | 2 cut(s) | 59, 232 |
| BsmBI | CGTCTC | 1 cut(s) | 59 |
| Bsp143I | GATC | 1 cut(s) | 292 |
| BspMAI | CTGCAG | 3 cut(s) | 40, 117, 124 |
| BssECI | CCNNGG | 2 cut(s) | 101, 211 |
| BssMI | GATC | 1 cut(s) | 292 |
| Bst2UI | CCWGG | 1 cut(s) | 103 |
| Bst4CI | ACNGT | 4 cut(s) | 7, 79, 252, 286 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 112 |
| BstC8I | GCNNGC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 342 |
| BstF5I | GGATG | 1 cut(s) | 229 |
| BstKTI | GATC | 1 cut(s) | 295 |
| BstMAI | GTCTC | 2 cut(s) | 59, 232 |
| BstMBI | GATC | 1 cut(s) | 292 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 38, 47, 112 |
| BstNI | CCWGG | 1 cut(s) | 103 |
| BstSCI | CCNGG | 1 cut(s) | 101 |
| BstSFI | CTRYAG | 4 cut(s) | 36, 113, 120, 241 |
| BstV1I | GCAGC | 3 cut(s) | 50, 99, 106 |
| BtsCI | GGATG | 1 cut(s) | 229 |
| BtsI | GCAGTG | 2 cut(s) | 33, 306 |
| BtsIMutI | CAGTG | 2 cut(s) | 33, 306 |
| Cac8I | GCNNGC | 1 cut(s) | 117 |
| Csp6I | GTAC | 2 cut(s) | 200, 282 |
| CviJI | RGCY | 6 cut(s) | 41, 58, 119, 246, 264, 277 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 58, 119, 246, 264, 277 |
| CviQI | GTAC | 2 cut(s) | 200, 282 |
| DdeI | CTNAG | 1 cut(s) | 342 |
| DpnI | GATC | 1 cut(s) | 294 |
| DpnII | GATC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 1 cut(s) | 148 |
| EcoRII | CCWGG | 1 cut(s) | 101 |
| Esp3I | CGTCTC | 1 cut(s) | 59 |
| FaiI | YATR | 5 cut(s) | 134, 159, 196, 198, 331 |
| FauNDI | CATATG | 1 cut(s) | 196 |
| Fnu4HI | GCNGC | 3 cut(s) | 39, 113, 120 |
| FokI | GGATG | 1 cut(s) | 236 |
| Fsp4HI | GCNGC | 3 cut(s) | 39, 113, 120 |
| GluI | GCNGC | 3 cut(s) | 39, 113, 120 |
| HinfI | GANTC | 2 cut(s) | 85, 346 |
| Hpy188I | TCNGA | 2 cut(s) | 167, 345 |
| HpyAV | CCTTC | 2 cut(s) | 214, 263 |
| HpyCH4III | ACNGT | 4 cut(s) | 7, 79, 252, 286 |
| HpyCH4V | TGCA | 5 cut(s) | 38, 115, 122, 299, 311 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 38, 47, 112 |
| HpyF3I | CTNAG | 1 cut(s) | 342 |
| Kzo9I | GATC | 1 cut(s) | 292 |
| LpnPI | CCDG | 5 cut(s) | 64, 74, 88, 101, 115 |
| Lsp1109I | GCAGC | 3 cut(s) | 50, 99, 106 |
| LweI | GCATC | 2 cut(s) | 130, 304 |
| MaeIII | GTNAC | 2 cut(s) | 96, 178 |
| MalI | GATC | 1 cut(s) | 294 |
| MboI | GATC | 1 cut(s) | 292 |
| MboII | GAAGA | 1 cut(s) | 139 |
| MluCI | AATT | 1 cut(s) | 204 |
| MlyI | GAGTC | 1 cut(s) | 94 |
| MnlI | CCTC | 1 cut(s) | 206 |
| MspR9I | CCNGG | 1 cut(s) | 103 |
| MvaI | CCWGG | 1 cut(s) | 103 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 38, 47, 112 |
| NdeI | CATATG | 1 cut(s) | 196 |
| NdeII | GATC | 1 cut(s) | 292 |
| NmuCI | GTSAC | 1 cut(s) | 178 |
| PfeI | GAWTC | 1 cut(s) | 346 |
| PkrI | GCNGC | 3 cut(s) | 40, 114, 121 |
| PleI | GAGTC | 1 cut(s) | 93 |
| PpsI | GAGTC | 1 cut(s) | 93 |
| Psp6I | CCWGG | 1 cut(s) | 101 |
| PspGI | CCWGG | 1 cut(s) | 101 |
| PstI | CTGCAG | 3 cut(s) | 40, 117, 124 |
| RsaI | GTAC | 2 cut(s) | 201, 283 |
| RsaNI | GTAC | 2 cut(s) | 200, 282 |
| SatI | GCNGC | 3 cut(s) | 39, 113, 120 |
| Sau3AI | GATC | 1 cut(s) | 292 |
| SchI | GAGTC | 1 cut(s) | 94 |
| ScrFI | CCNGG | 1 cut(s) | 103 |
| SetI | ASST | 5 cut(s) | 30, 43, 60, 248, 279 |
| SfaNI | GCATC | 2 cut(s) | 130, 304 |
| SfcI | CTRYAG | 4 cut(s) | 36, 113, 120, 241 |
| Sse9I | AATT | 1 cut(s) | 204 |
| StyD4I | CCNGG | 1 cut(s) | 101 |
| TaaI | ACNGT | 4 cut(s) | 7, 79, 252, 286 |
| TaqI | TCGA | 1 cut(s) | 349 |
| TasI | AATT | 1 cut(s) | 204 |
| TatI | WGTACW | 1 cut(s) | 281 |
| TfiI | GAWTC | 1 cut(s) | 346 |
| TscAI | CASTG | 2 cut(s) | 40, 306 |
| TseFI | GTSAC | 1 cut(s) | 178 |
| TseI | GCWGC | 3 cut(s) | 38, 112, 119 |
| Tsp45I | GTSAC | 1 cut(s) | 178 |
| TspRI | CASTG | 2 cut(s) | 40, 306 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 58 |