Prupe.4G091800_v2.0.a1

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
4580447 .. 4586453
6007 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G091800.2

Sequence Viewer

Length: 3654 bp
ATGCTGACGAAATTCGAGACCAAGAGTAATCGAGTGAAGGGGCTGAGCTTTCACAGCAAGAGGCCATGGATCTTGGCCAGTCTCCACAGCGGTGTGATCCAGCTCTGGGATTACCGGATGGGCACTCTCATCGACCGTTTTGACGAGCACGATGGCCCTGTACGTGGTGTCCATTTCCACACCTCTCAGCCGCTTTTCGTCTCTGGAGGGGATGATTACAAGATCAAGGTGTGGAATTACAAGCTGCATAGGTGTTTGTTTACACTTCTTGGACACCTTGATTACATACGCACCGTTCAATTCCATCATGAGTACCCATGGATTGTCAGTGCTAGCGATGATCAGACAATCAGAATATGGAATTGGCAGTCCCGAACTTGTATTTCTGTGCTCACTGGACACAACCATTACGTCATGTGTGCCTTATTCCATCCAAAGGAGGATCTTGTTGTCTCAGCATCCTTGGATCAAACTGTTCGTGTTTGGGATATTGGTGCCCTCAGGAAAAAGACGGTTGCCCCTGCAGATGACATCCTGCGCCTGAGTCAGATGAATGCAGATTTCTTTGGTGGAGTTGATGCTGTTGTGAAGTATGTCTTGGAAGGTCATGATCGGGGTGTTAATTGGGCATCATTCCATCCCACACTCCCTCTGATCGTCTCTGGAGCAGACGATCGACAAGTGAAACTCTGGCGAATGAATGATACAAAGGCTTGGGAGGTGGACACCTTAAGGGGGCACATGAACAATGTATCATGTGTTTTATTCCATGCAAGGCAGGATATTATTGTGTCCAATTCAGAGGATAGAAGCATCCGAGTCTGGGATGCCACAAAACGGACTGGTCTTCAGACATTTCGTAGAGAGCATGATAGGTTCTGGATTCTTGCAGCACATCCTGAAATGAACCTTTTGGCTGCTGGTCATGATAGTGGCATGATCGTCTTTAAATTGGAGAGAGAACGTCCTGCCTTTTCTGTTAGTGGTGATTCAATGTTCTATGTTAAAGATCGTTTTCTCCGCTTCTTTGAGTTCTCTACCCAGAGAGACACTCAGGTTATCCCTATTCGAAGGCCTGGTTCTTCCACCTTGAATCAAGGGGCTAAAACACTATCTTATAGCCCTACAGAAAATGCTGTTTTGATATGTTCAGAAACGGAAGGGGGTTCTTATGAGCTATACATTATACCCAAAGATAGCTTTGGCCGGGGTGATATTGTGCAGGAGGCAAAAAGAGGAATTGGAGGGCCAGCCGTGTTCGTGGCTAGGAATAGGTTTGCAGTGCTTGAAAAGAGCAGCAATCAAGTTATAGTTAAGAACCTTAAAAATGAGATTGTCAAGAAGAGTGCCCTACCTATTATTGCTGATGCAATATTTTATGCTGGAACTGGAAACTTGCTTTGCAGGGCAGAGGACAGAGTTATTATTTTTGACCTGCAGCAGAGAATTATTCTTGGGGAGCTTCAAACTCCTTTCGTAAGGTATGTTGTTTGGTCAAACGATATGGAAAGCATTGCTTTGCTGAGCAAACATTCTATTGTGATAGCCAACAAGAAGCTTGTGCATCAGTGCACTCTCCATGAGACAATTCGTGTAAAGAGTGGAGCTTGGGATGACAATGGCGTTTTCATATACACAACCTTGAACCACATCAAATACTGCCTTCCCAATGGGGACAACGGAATCATCAGGACCCTAGATGTTCCAGTATATATAACAAAAGTGTATGGAAGCACCATCCATTGCTTGGATCGAGATGGGAAGAACTGTGCCATTGTTGTTGATGCAACAGAATATGTTTTCAAGCTATCCTTACTGAAGAAGAGGTATGACCAGGTTATGAGCATGATTAAGAGCTCTGAGCTCTGTGGCCAGGCCATGATTGCATATCTACAGCAGAAAGGTTTCCCTGAGGTTGCCCTTCATTTTGTGAAGGATGAAAGGACTCGCTTCAACTTGGCACTAGGGAGTGGAAACATCCAGATTGCTGTTGCTTCTGCCAAGGAAATTGATGAGAAAGATCACTGGTATCGTTTGGGAGTGGAGGCCCTTCGCCAGGGTAATGCAGGCATTGTAGAATATGCGTATCAGAAGACAAAGAATTTTGAGAGGCTATCATTCCTCTATCTTGTGACTGGAAACTTGGATAAATTGTCCAAAATGCTGAAAATTGCTGAAGTCAAGAATGATGTGATGGGTCAATTCCACAATGCTCTATATTTGGGTGACATCAGAGAGCGTGTTAAGATATTGGAGAATGCTGGTCATTTACCCCTTGCTTATAGCACAGCTGTAATTCATGGCCTCCATGATATTGCAGAACGTTTGGCAGCTGAACTGGGAGATAATGTTCCGATTTTACCCAAGGGGAAATCTCCATCTCTTTTGATGCCTCCAACCCCAATCATCTGTGGTGGAGATTGGCCCTTGTTGAGGGTTATGAGAGGAATATTTGAGGGTGGTCTTGATAATGTGGGCCGGAATGCAGAGGAAGAGTATGAAGAGGCTACAGATGCTGATTGGGGAGAGGATTTGGATATTGTTGACGTGGAAAACATTCCAAATGGAGACATCAGTGCAGTGCTGGAGGATGAGGAAGAACATGAGGAAAATGAGGAGGGAGGATGGGATCTTGAAGATCTTGAACTTCCACCTGAGATTGATACTCCCAAAACTGCAAGTAATGCCCGTTCTTCTGTGTTTGTTGCCCCAACTCCTGGTATGCCTGTAAGTCAAATTTGGACCCAGAAGTCATCTCTTGCTGCTGAACATGCAGCGGCTGGGAATTTCGATATTGCAATGCGTTTGTTGAACCGGCAGCTGGGTATAAAGAACTTTGCTCCCCTAAGACAATTGTTTCTTGACTTACACATGGGCAGTCATACGTATCTACGTGCCTTCTCATCAGCTCCTGTGATCTCTGTGGCTGTTGAGAGGGGATGGAGTGAGTCAGCTACTCCTAATGTTAGGGGTCCTCCTGCTCTTGTGTTTAAATTCTCAGAGCTGGAAGAGAAGCTTAAGGCGGGTTACAAGGCCACAACTACGGGGAAATTTACAGAGGCTTTACGACTTCTCCTTGGTATTCTGCATACTATTCCTTTGATTGTAGTTGATTCAAGGAGAGAGGTTGATGAAGTAAAAGAATTAATTATCATTGTGAAGGAGTATGTTCTGGGTTTGAAGATGGAGCTTAAGAGGAGGGAACTTAAGGACAATCCCGTTCGCCAACAGGAGCTAGCAGCTTACTTCACCCACTGTAACCTTCAGATGCCTCACTTGAGACTTGCATTACTGAATGCCATGAGTGTTTGCTTTAAGGCTGGTAATCTCAACACAGCAGCCAACTTTGCCAGGCGACTTTTGGAGACCAATCCCACCACTGAAAACCATGCAAAGACTGCAAGACAAGTCCTCCAGGCTGCCGAGAAGAACATGAATGATGCAACCCAGCTAAATTATGATTTCAGAAATCCATTTGTGGTTTGTGGTGCAACATATGTGCCTATTTACCGTGGGCAGAAGGATGTTTCATGCCCGTACTGCAGTTCTCGGTTTGTTCTGGCCCAGGAAGGGCAGCTCTGTACTGTTTGTGATCTTGCAGTGGTTGGAGCGGATGCATCTGGGTTGCTTTGTTCTCCTACCCAGATAAGATGA

Protein Analysis

1218

Amino Acids

136.92

Weight (kDa)

6.58

Isoelectric Point (pI)

32.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2749
Acc36I ACCTGC 1 cut(s) 1443
AccB1I GGYRCC 1 cut(s) 494
AccB7I CCANNNNNTGG 2 cut(s) 1747, 2717
AccBSI CCGCTC 1 cut(s) 3611
AciI CCGC 6 cut(s) 90, 191, 1021, 2777, 3023, 3611
AclI AACGTT 1 cut(s) 2323
AclWI GGATC 6 cut(s) 77, 91, 450, 474, 1758, 2637
AcoI YGGCCR 3 cut(s) 75, 1204, 1870
AcsI RAATTY 6 cut(s) 11, 2101, 2736, 2785, 2993, 3050
AcuI CTGAAG 4 cut(s) 833, 1838, 2196, 3248
AfaI GTAC 4 cut(s) 162, 314, 3539, 3583
AflII CTTAAG 4 cut(s) 730, 3017, 3191, 3206
AjiI CACGTC 1 cut(s) 2548
AjnI CCWGG 8 cut(s) 1075, 1833, 1872, 2055, 2716, 3350, 3414, 3564
AjuI GAANNNNNNNTTGG 4 cut(s) 346, 378, 581, 613
AleI CACNNNNGTG 1 cut(s) 90
AloI GAACNNNNNNTCC 2 cut(s) 2334, 2366
Alw21I GWGCWC 5 cut(s) 150, 393, 1574, 1859, 1866
Alw44I GTGCAC 1 cut(s) 1570
AlwI GGATC 6 cut(s) 77, 91, 450, 474, 1758, 2637
AlwNI CAGNNNCTG 3 cut(s) 2516, 2780, 2912
ApaLI GTGCAC 1 cut(s) 1570
ApoI RAATTY 6 cut(s) 11, 2101, 2736, 2785, 2993, 3050
AseI ATTAAT 1 cut(s) 3146
Asp700I GAANNNNTTC 2 cut(s) 1904, 2556
AspLEI GCGC 1 cut(s) 540
AspS9I GGNCC 9 cut(s) 155, 1247, 1692, 2047, 2424, 2476, 2742, 2972, 3562
AsuC2I CCSGG 1 cut(s) 1208
AsuHPI GGTGA 4 cut(s) 998, 1223, 2237, 3241
AsuII TTCGAA 1 cut(s) 1069
AsuNHI GCTAGC 2 cut(s) 332, 3235
AvaII GGWCC 3 cut(s) 1692, 2742, 2972
AxyI CCTNAGG 2 cut(s) 500, 1911
BaeGI GKGCMC 5 cut(s) 125, 499, 741, 1351, 1574
BalI TGGCCA 2 cut(s) 77, 1872
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 2 cut(s) 1859, 1866
BbsI GAAGAC 2 cut(s) 839, 2099
Bbv12I GWGCWC 5 cut(s) 150, 393, 1574, 1859, 1866
BceAI ACGGC 1 cut(s) 1238
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BciT130I CCWGG 8 cut(s) 1077, 1835, 1874, 2057, 2718, 3352, 3416, 3566
BclI TGATCA 1 cut(s) 340
BcnI CCSGG 1 cut(s) 1208
BfaI CTAG 5 cut(s) 333, 1266, 1697, 1964, 3236
BfmI CTRYAG 6 cut(s) 522, 1125, 1436, 1892, 2508, 3541
BfrI CTTAAG 4 cut(s) 730, 3017, 3191, 3206
BfuAI ACCTGC 1 cut(s) 1443
BglII AGATCT 1 cut(s) 2638
BlpI GCTNAGC 2 cut(s) 44, 1523
Bme1390I CCNGG 9 cut(s) 1077, 1208, 1835, 1874, 2057, 2718, 3352, 3416, 3566
Bme18I GGWCC 3 cut(s) 1692, 2742, 2972
BmgBI CACGTC 1 cut(s) 2548
BmgT120I GGNCC 9 cut(s) 155, 1247, 1692, 2047, 2424, 2476, 2742, 2972, 3562
BmiI GGNNCC 4 cut(s) 496, 1694, 2744, 2973
BmrFI CCNGG 9 cut(s) 1077, 1208, 1835, 1874, 2057, 2718, 3352, 3416, 3566
BmrI ACTGGG 1 cut(s) 2348
BmtI GCTAGC 2 cut(s) 336, 3239
BmuI ACTGGG 1 cut(s) 2348
BpiI GAAGAC 2 cut(s) 839, 2099
BplI GAGNNNNNCTC 2 cut(s) 1036, 1068
BpmI CTGGAG 4 cut(s) 225, 684, 2606, 3398
Bpu1102I GCTNAGC 2 cut(s) 44, 1523
Bpu14I TTCGAA 1 cut(s) 1069
BpuEI CTTGAG 1 cut(s) 3298
BpuMI CCSGG 1 cut(s) 1208
BsaAI YACGTR 3 cut(s) 164, 2886, 2894
BsaI GGTCTC 2 cut(s) 11, 3359
BsaWI WCCGGW 1 cut(s) 114
BsaXI ACNNNNNCTCC 6 cut(s) 2334, 2364, 3057, 3087, 3396, 3426
Bse118I RCCGGY 1 cut(s) 2814
Bse1I ACTGG 8 cut(s) 78, 400, 847, 1393, 1706, 2030, 2140, 2343
Bse21I CCTNAGG 2 cut(s) 500, 1911
Bse3DI GCAATG 3 cut(s) 1512, 1741, 2805
BseBI CCWGG 8 cut(s) 1077, 1835, 1874, 2057, 2718, 3352, 3416, 3566
BseMI GCAATG 3 cut(s) 1512, 1741, 2805
BseNI ACTGG 8 cut(s) 78, 400, 847, 1393, 1706, 2030, 2140, 2343
BseRI GAGGAG 2 cut(s) 2630, 3211
BseSI GKGCMC 5 cut(s) 125, 499, 741, 1351, 1574
BseYI CCCAGC 3 cut(s) 2780, 2821, 3447
BsgI GTGCAG 2 cut(s) 1241, 2598
Bsh1285I CGRYCG 2 cut(s) 136, 676
BshNI GGYRCC 1 cut(s) 494
BsiEI CGRYCG 2 cut(s) 136, 676
BsiHKAI GWGCWC 5 cut(s) 150, 393, 1574, 1859, 1866
BsiSI CCGG 4 cut(s) 115, 1207, 2479, 2815
BslFI GGGAC 2 cut(s) 355, 1688
BsmBI CGTCTC 2 cut(s) 205, 664
BsmFI GGGAC 2 cut(s) 355, 1688
BsmI GAATGC 4 cut(s) 559, 2263, 2488, 3301
Bso31I GGTCTC 2 cut(s) 11, 3359
Bsp119I TTCGAA 1 cut(s) 1069
Bsp1286I GDGCHC 9 cut(s) 125, 150, 393, 499, 741, 1351, 1574, 1859, 1866
Bsp1720I GCTNAGC 2 cut(s) 44, 1523
Bsp19I CCATGG 2 cut(s) 65, 317
BspACI CCGC 6 cut(s) 90, 191, 1021, 2777, 3023, 3611
BspHI TCATGA 3 cut(s) 307, 607, 925
BspLI GGNNCC 4 cut(s) 496, 1694, 2744, 2973
BspMAI CTGCAG 3 cut(s) 526, 1440, 3545
BspMI ACCTGC 1 cut(s) 1443
BspOI GCTAGC 2 cut(s) 336, 3239
BspPI GGATC 6 cut(s) 77, 91, 450, 474, 1758, 2637
BspT104I TTCGAA 1 cut(s) 1069
BspT107I GGYRCC 1 cut(s) 494
BspTI CTTAAG 4 cut(s) 730, 3017, 3191, 3206
BspTNI GGTCTC 2 cut(s) 11, 3359
BsrBI CCGCTC 1 cut(s) 3611
BsrDI GCAATG 3 cut(s) 1512, 1741, 2805
BsrFI RCCGGY 1 cut(s) 2814
BsrI ACTGG 8 cut(s) 78, 400, 847, 1393, 1706, 2030, 2140, 2343
BssAI RCCGGY 1 cut(s) 2814
BssT1I CCWWGG 6 cut(s) 65, 317, 462, 2001, 2364, 3076
Bst2UI CCWGG 8 cut(s) 1077, 1835, 1874, 2057, 2718, 3352, 3416, 3566
Bst4CI ACNGT 8 cut(s) 137, 295, 475, 514, 1769, 3257, 3512, 3586
Bst6I CTCTTC 5 cut(s) 1337, 1817, 2487, 2496, 3003
BstAFI CTTAAG 4 cut(s) 730, 3017, 3191, 3206
BstAPI GCANNNNNTGC 2 cut(s) 2684, 3398
BstBAI YACGTR 3 cut(s) 164, 2886, 2894
BstBI TTCGAA 1 cut(s) 1069
BstC8I GCNNGC 4 cut(s) 334, 1251, 2068, 3237
BstDSI CCRYGG 3 cut(s) 65, 317, 3511
BstENI CCTNNNNNAGG 2 cut(s) 2054, 2431
BstHHI GCGC 1 cut(s) 540
BstMCI CGRYCG 2 cut(s) 136, 676
BstMWI GCNNNNNNNGC 8 cut(s) 54, 1883, 2513, 2684, 2771, 3347, 3398, 3540
BstNI CCWGG 8 cut(s) 1077, 1835, 1874, 2057, 2718, 3352, 3416, 3566
BstNSI RCATGY 1 cut(s) 2774
BstSCI CCNGG 9 cut(s) 1075, 1206, 1833, 1872, 2055, 2716, 3350, 3414, 3564
BstSFI CTRYAG 6 cut(s) 522, 1125, 1436, 1892, 2508, 3541
BstSLI GKGCMC 5 cut(s) 125, 499, 741, 1351, 1574
BstSNI TACGTA 1 cut(s) 2886
BstV2I GAAGAC 2 cut(s) 839, 2099
BstX2I RGATCY 4 cut(s) 69, 442, 2629, 2638
BstYI RGATCY 4 cut(s) 69, 442, 2629, 2638
Bsu36I CCTNAGG 2 cut(s) 500, 1911
BtgI CCRYGG 3 cut(s) 65, 317, 3511
BtgZI GCGATG 1 cut(s) 351
BtrI CACGTC 1 cut(s) 2548
BtsI GCAGTG 3 cut(s) 1287, 2586, 3606
BveI ACCTGC 1 cut(s) 1443
Cac8I GCNNGC 4 cut(s) 334, 1251, 2068, 3237
CaiI CAGNNNCTG 3 cut(s) 2516, 2780, 2912
CciI TCATGA 3 cut(s) 307, 607, 925
CfoI GCGC 1 cut(s) 540
Cfr10I RCCGGY 1 cut(s) 2814
Cfr13I GGNCC 9 cut(s) 155, 1247, 1692, 2047, 2424, 2476, 2742, 2972, 3562
CsiI ACCWGGT 1 cut(s) 1833
Csp6I GTAC 4 cut(s) 161, 313, 3538, 3582
CviQI GTAC 4 cut(s) 161, 313, 3538, 3582
DraI TTTAAA 2 cut(s) 949, 2992
DrdI GACNNNNNNGTC 1 cut(s) 2749
DseDI GACNNNNNNGTC 1 cut(s) 2749
EaeI YGGCCR 3 cut(s) 75, 1204, 1870
Eam1104I CTCTTC 5 cut(s) 1337, 1817, 2487, 2496, 3003
EarI CTCTTC 5 cut(s) 1337, 1817, 2487, 2496, 3003
Ecl136II GAGCTC 2 cut(s) 1857, 1864
Eco105I TACGTA 1 cut(s) 2886
Eco130I CCWWGG 6 cut(s) 65, 317, 462, 2001, 2364, 3076
Eco147I AGGCCT 1 cut(s) 1075
Eco24I GRGCYC 2 cut(s) 1859, 1866
Eco31I GGTCTC 2 cut(s) 11, 3359
Eco47I GGWCC 3 cut(s) 1692, 2742, 2972
Eco53kI GAGCTC 2 cut(s) 1857, 1864
Eco57I CTGAAG 4 cut(s) 833, 1838, 2196, 3248
Eco81I CCTNAGG 2 cut(s) 500, 1911
EcoICRI GAGCTC 2 cut(s) 1857, 1864
EcoNI CCTNNNNNAGG 2 cut(s) 2054, 2431
EcoO109I RGGNCCY 3 cut(s) 1692, 2047, 2972
EcoRII CCWGG 8 cut(s) 1075, 1833, 1872, 2055, 2716, 3350, 3414, 3564
EcoT14I CCWWGG 6 cut(s) 65, 317, 462, 2001, 2364, 3076
EcoT22I ATGCAT 1 cut(s) 3619
EcoT38I GRGCYC 2 cut(s) 1859, 1866
ErhI CCWWGG 6 cut(s) 65, 317, 462, 2001, 2364, 3076
Esp3I CGTCTC 2 cut(s) 205, 664
FalI AAGNNNNNCTT 8 cut(s) 581, 613, 1501, 1533, 1796, 1828, 3000, 3032
FaqI GGGAC 2 cut(s) 355, 1688
FauI CCCGC 1 cut(s) 3016
FauNDI CATATG 1 cut(s) 3496
FbaI TGATCA 1 cut(s) 340
FriOI GRGCYC 2 cut(s) 1859, 1866
FspBI CTAG 5 cut(s) 333, 1266, 1697, 1964, 3236
GlaI GCGC 1 cut(s) 539
GsaI CCCAGC 3 cut(s) 2784, 2825, 3451
GsuI CTGGAG 4 cut(s) 225, 684, 2606, 3398
HapII CCGG 4 cut(s) 115, 1207, 2479, 2815
HhaI GCGC 1 cut(s) 540
Hin6I GCGC 1 cut(s) 538
HinP1I GCGC 1 cut(s) 538
HincII GTYRAC 1 cut(s) 2545
HindII GTYRAC 1 cut(s) 2545
HindIII AAGCTT 2 cut(s) 1556, 3014
HinfI GANTC 9 cut(s) 544, 819, 883, 989, 1093, 1683, 1945, 2948, 3113
HpaII CCGG 4 cut(s) 115, 1207, 2479, 2815
HphI GGTGA 4 cut(s) 998, 1223, 2237, 3241
Hpy166II GTNNAC 4 cut(s) 261, 724, 1572, 2545
Hpy8I GTNNAC 4 cut(s) 261, 724, 1572, 2545
HpyCH4III ACNGT 8 cut(s) 137, 295, 475, 514, 1769, 3257, 3512, 3586
HpyCH4IV ACGT 7 cut(s) 163, 411, 964, 2323, 2547, 2885, 2893
HpyF10VI GCNNNNNNNGC 8 cut(s) 54, 1883, 2513, 2684, 2771, 3347, 3398, 3540
HpySE526I ACGT 7 cut(s) 163, 411, 964, 2323, 2547, 2885, 2893
HspAI GCGC 1 cut(s) 538
Ksp22I TGATCA 1 cut(s) 340
LmnI GCTCC 8 cut(s) 665, 1459, 1604, 2845, 2914, 3187, 3232, 3608
MabI ACCWGGT 1 cut(s) 1833
MaeI CTAG 5 cut(s) 333, 1266, 1697, 1964, 3236
MaeII ACGT 7 cut(s) 163, 411, 964, 2323, 2547, 2885, 2893
MaeIII GTNAC 4 cut(s) 2131, 2225, 3026, 3257
MbiI CCGCTC 1 cut(s) 3611
MfeI CAATTG 1 cut(s) 2852
MflI RGATCY 4 cut(s) 69, 442, 2629, 2638
MhlI GDGCHC 9 cut(s) 125, 150, 393, 499, 741, 1351, 1574, 1859, 1866
MlsI TGGCCA 2 cut(s) 77, 1872
MluNI TGGCCA 2 cut(s) 77, 1872
MlyI GAGTC 4 cut(s) 553, 828, 1939, 2957
MmeI TCCRAC 2 cut(s) 2420, 3586
Mox20I TGGCCA 2 cut(s) 77, 1872
Mph1103I ATGCAT 1 cut(s) 3619
MroXI GAANNNNTTC 2 cut(s) 1904, 2556
MscI TGGCCA 2 cut(s) 77, 1872
MslI CAYNNNNRTG 2 cut(s) 90, 930
Msp20I TGGCCA 2 cut(s) 77, 1872
MspA1I CMGCKG 5 cut(s) 90, 2291, 2333, 2777, 2821
MspCI CTTAAG 4 cut(s) 730, 3017, 3191, 3206
MspI CCGG 4 cut(s) 115, 1207, 2479, 2815
MspR9I CCNGG 9 cut(s) 1077, 1208, 1835, 1874, 2057, 2718, 3352, 3416, 3566
MunI CAATTG 1 cut(s) 2852
Mva1269I GAATGC 4 cut(s) 559, 2263, 2488, 3301
MvaI CCWGG 8 cut(s) 1077, 1835, 1874, 2057, 2718, 3352, 3416, 3566
MwoI GCNNNNNNNGC 8 cut(s) 54, 1883, 2513, 2684, 2771, 3347, 3398, 3540
NciI CCSGG 1 cut(s) 1208
NcoI CCATGG 2 cut(s) 65, 317
NdeI CATATG 1 cut(s) 3496
NheI GCTAGC 2 cut(s) 332, 3235
NlaIV GGNNCC 4 cut(s) 496, 1694, 2744, 2973
NmeAIII GCCGAG 1 cut(s) 3448
NmuCI GTSAC 2 cut(s) 2131, 2225
NsiI ATGCAT 1 cut(s) 3619
NspI RCATGY 1 cut(s) 2774
NspV TTCGAA 1 cut(s) 1069
OliI CACNNNNGTG 1 cut(s) 90
PagI TCATGA 3 cut(s) 307, 607, 925
PceI AGGCCT 1 cut(s) 1075
PctI GAATGC 4 cut(s) 559, 2263, 2488, 3301
PdmI GAANNNNTTC 2 cut(s) 1904, 2556
PfeI GAWTC 5 cut(s) 883, 989, 1093, 1683, 3113
PflMI CCANNNNNTGG 2 cut(s) 1747, 2717
Ple19I CGATCG 1 cut(s) 676
PleI GAGTC 4 cut(s) 552, 827, 1939, 2956
PpsI GAGTC 4 cut(s) 552, 827, 1939, 2956
Ppu21I YACGTR 3 cut(s) 164, 2886, 2894
PpuMI RGGWCCY 2 cut(s) 1692, 2972
PshBI ATTAAT 1 cut(s) 3146
Psp124BI GAGCTC 2 cut(s) 1859, 1866
Psp1406I AACGTT 1 cut(s) 2323
Psp5II RGGWCCY 2 cut(s) 1692, 2972
Psp6I CCWGG 8 cut(s) 1075, 1833, 1872, 2055, 2716, 3350, 3414, 3564
PspFI CCCAGC 3 cut(s) 2780, 2821, 3447
PspGI CCWGG 8 cut(s) 1075, 1833, 1872, 2055, 2716, 3350, 3414, 3564
PspN4I GGNNCC 4 cut(s) 496, 1694, 2744, 2973
PspPI GGNCC 9 cut(s) 155, 1247, 1692, 2047, 2424, 2476, 2742, 2972, 3562
PspPPI RGGWCCY 2 cut(s) 1692, 2972
PsrI GAACNNNNNNTAC 2 cut(s) 2674, 2706
PstI CTGCAG 3 cut(s) 526, 1440, 3545
PstNI CAGNNNCTG 3 cut(s) 2516, 2780, 2912
PsuI RGATCY 4 cut(s) 69, 442, 2629, 2638
PvuI CGATCG 1 cut(s) 676
PvuII CAGCTG 3 cut(s) 2291, 2333, 2821
RsaI GTAC 4 cut(s) 162, 314, 3539, 3583
RsaNI GTAC 4 cut(s) 161, 313, 3538, 3582
RseI CAYNNNNRTG 2 cut(s) 90, 930
SacI GAGCTC 2 cut(s) 1859, 1866
Sau96I GGNCC 9 cut(s) 155, 1247, 1692, 2047, 2424, 2476, 2742, 2972, 3562
SchI GAGTC 4 cut(s) 553, 828, 1939, 2957
ScrFI CCNGG 9 cut(s) 1077, 1208, 1835, 1874, 2057, 2718, 3352, 3416, 3566
SduI GDGCHC 9 cut(s) 125, 150, 393, 499, 741, 1351, 1574, 1859, 1866
SexAI ACCWGGT 1 cut(s) 1833
SfcI CTRYAG 6 cut(s) 522, 1125, 1436, 1892, 2508, 3541
SfuI TTCGAA 1 cut(s) 1069
SinI GGWCC 3 cut(s) 1692, 2742, 2972
SmiMI CAYNNNNRTG 2 cut(s) 90, 930
SmlI CTYRAG 5 cut(s) 730, 3017, 3191, 3206, 3277
SmoI CTYRAG 5 cut(s) 730, 3017, 3191, 3206, 3277
SnaBI TACGTA 1 cut(s) 2886
SseBI AGGCCT 1 cut(s) 1075
SsiI CCGC 6 cut(s) 90, 191, 1021, 2777, 3023, 3611
SspI AATATT 2 cut(s) 1374, 2451
SspMI CTAG 5 cut(s) 333, 1266, 1697, 1964, 3236
SstI GAGCTC 2 cut(s) 1859, 1866
StuI AGGCCT 1 cut(s) 1075
StyD4I CCNGG 9 cut(s) 1075, 1206, 1833, 1872, 2055, 2716, 3350, 3414, 3564
StyI CCWWGG 6 cut(s) 65, 317, 462, 2001, 2364, 3076
TaaI ACNGT 8 cut(s) 137, 295, 475, 514, 1769, 3257, 3512, 3586
TaiI ACGT 7 cut(s) 166, 414, 967, 2326, 2550, 2888, 2896
TaqI TCGA 7 cut(s) 15, 31, 132, 676, 1069, 1753, 2790
TatI WGTACW 1 cut(s) 3581
TauI GCSGC 2 cut(s) 193, 2780
TfiI GAWTC 5 cut(s) 883, 989, 1093, 1683, 3113
TseFI GTSAC 2 cut(s) 2131, 2225
Tsp45I GTSAC 2 cut(s) 2131, 2225
TspGWI ACGGA 3 cut(s) 853, 1172, 1695
Van91I CCANNNNNTGG 2 cut(s) 1747, 2717
Vha464I CTTAAG 4 cut(s) 730, 3017, 3191, 3206
VneI GTGCAC 1 cut(s) 1570
VpaK11BI GGWCC 3 cut(s) 1692, 2742, 2972
VspI ATTAAT 1 cut(s) 3146
XagI CCTNNNNNAGG 2 cut(s) 2054, 2431
XapI RAATTY 6 cut(s) 11, 2101, 2736, 2785, 2993, 3050
XceI RCATGY 1 cut(s) 2774
XcmI CCANNNNNNNNNTGG 2 cut(s) 1744, 3358
XmnI GAANNNNTTC 2 cut(s) 1904, 2556
XspI CTAG 5 cut(s) 333, 1266, 1697, 1964, 3236
Zsp2I ATGCAT 1 cut(s) 3619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.