The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RF-1 | PF00472 | 81 - 203 | 6.3e-16 | RF-1 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 140 |
| AccBSI | CCGCTC | 1 cut(s) | 164 |
| AciI | CCGC | 6 cut(s) | 5, 18, 126, 162, 219, 234 |
| AclWI | GGATC | 1 cut(s) | 380 |
| AcoI | YGGCCR | 1 cut(s) | 24 |
| AcuI | CTGAAG | 1 cut(s) | 476 |
| AcyI | GRCGYC | 1 cut(s) | 141 |
| AfaI | GTAC | 2 cut(s) | 454, 609 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 144 |
| AgsI | TTSAA | 4 cut(s) | 316, 340, 441, 473 |
| AjnI | CCWGG | 2 cut(s) | 289, 443 |
| AleI | CACNNNNGTG | 1 cut(s) | 323 |
| AluBI | AGCT | 2 cut(s) | 187, 427 |
| AluI | AGCT | 2 cut(s) | 187, 427 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| AlwI | GGATC | 1 cut(s) | 380 |
| AoxI | GGCC | 1 cut(s) | 24 |
| ApeKI | GCWGC | 2 cut(s) | 509, 569 |
| AspLEI | GCGC | 2 cut(s) | 125, 143 |
| AspS9I | GGNCC | 1 cut(s) | 287 |
| AsuC2I | CCSGG | 1 cut(s) | 145 |
| AsuHPI | GGTGA | 1 cut(s) | 41 |
| AvaII | GGWCC | 1 cut(s) | 287 |
| BanI | GGYRCC | 1 cut(s) | 140 |
| BauI | CACGAG | 1 cut(s) | 639 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BbvI | GCAGC | 2 cut(s) | 496, 556 |
| BccI | CCATC | 3 cut(s) | 61, 79, 413 |
| BceAI | ACGGC | 1 cut(s) | 39 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 191, 225 |
| BciT130I | CCWGG | 2 cut(s) | 291, 445 |
| BcnI | CCSGG | 1 cut(s) | 145 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| BfaI | CTAG | 1 cut(s) | 251 |
| BfoI | RGCGCY | 1 cut(s) | 144 |
| BisI | GCNGC | 3 cut(s) | 126, 510, 570 |
| BlsI | GCNGC | 3 cut(s) | 127, 511, 571 |
| Bme1390I | CCNGG | 3 cut(s) | 145, 291, 445 |
| Bme18I | GGWCC | 1 cut(s) | 287 |
| BmgT120I | GGNCC | 1 cut(s) | 287 |
| BmiI | GGNNCC | 1 cut(s) | 142 |
| BmrFI | CCNGG | 3 cut(s) | 145, 291, 445 |
| BmsI | GCATC | 4 cut(s) | 21, 123, 466, 496 |
| BpmI | CTGGAG | 1 cut(s) | 312 |
| Bpu10I | CCTNAGC | 1 cut(s) | 35 |
| BpuMI | CCSGG | 1 cut(s) | 145 |
| BsaHI | GRCGYC | 1 cut(s) | 141 |
| BsaI | GGTCTC | 1 cut(s) | 163 |
| BsaJI | CCNNGG | 2 cut(s) | 144, 201 |
| BsaWI | WCCGGW | 1 cut(s) | 117 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseBI | CCWGG | 2 cut(s) | 291, 445 |
| BseDI | CCNNGG | 2 cut(s) | 144, 201 |
| BseGI | GGATG | 3 cut(s) | 53, 114, 424 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseMII | CTCAG | 3 cut(s) | 49, 188, 549 |
| BseRI | GAGGAG | 2 cut(s) | 218, 519 |
| BseXI | GCAGC | 2 cut(s) | 496, 556 |
| BshFI | GGCC | 1 cut(s) | 26 |
| BshNI | GGYRCC | 1 cut(s) | 140 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BsiSI | CCGG | 4 cut(s) | 105, 118, 138, 144 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| BsnI | GGCC | 1 cut(s) | 26 |
| Bso31I | GGTCTC | 1 cut(s) | 163 |
| Bsp1286I | GDGCHC | 1 cut(s) | 214 |
| Bsp143I | GATC | 3 cut(s) | 253, 372, 555 |
| BspACI | CCGC | 6 cut(s) | 5, 18, 126, 162, 219, 234 |
| BspANI | GGCC | 1 cut(s) | 26 |
| BspCNI | CTCAG | 3 cut(s) | 48, 187, 548 |
| BspLI | GGNNCC | 1 cut(s) | 142 |
| BspPI | GGATC | 1 cut(s) | 380 |
| BspQI | GCTCTTC | 1 cut(s) | 534 |
| BspT107I | GGYRCC | 1 cut(s) | 140 |
| BspTNI | GGTCTC | 1 cut(s) | 163 |
| BsrBI | CCGCTC | 1 cut(s) | 164 |
| BssECI | CCNNGG | 2 cut(s) | 144, 201 |
| BssMI | GATC | 3 cut(s) | 253, 372, 555 |
| BssNI | GRCGYC | 1 cut(s) | 141 |
| BssSI | CACGAG | 1 cut(s) | 639 |
| Bst2BI | CACGAG | 1 cut(s) | 639 |
| Bst2UI | CCWGG | 2 cut(s) | 291, 445 |
| Bst4CI | ACNGT | 2 cut(s) | 265, 647 |
| Bst6I | CTCTTC | 1 cut(s) | 534 |
| BstACI | GRCGYC | 1 cut(s) | 141 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 120 |
| BstC8I | GCNNGC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 6 cut(s) | 11, 35, 174, 321, 362, 535 |
| BstF5I | GGATG | 3 cut(s) | 53, 114, 424 |
| BstH2I | RGCGCY | 1 cut(s) | 144 |
| BstHHI | GCGC | 2 cut(s) | 125, 143 |
| BstKTI | GATC | 3 cut(s) | 256, 375, 558 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstMBI | GATC | 3 cut(s) | 253, 372, 555 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 120, 218, 566, 597 |
| BstNI | CCWGG | 2 cut(s) | 291, 445 |
| BstNSI | RCATGY | 1 cut(s) | 334 |
| BstSCI | CCNGG | 3 cut(s) | 143, 289, 443 |
| BstV1I | GCAGC | 2 cut(s) | 496, 556 |
| BsuRI | GGCC | 1 cut(s) | 26 |
| BtsCI | GGATG | 3 cut(s) | 53, 114, 424 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 1 cut(s) | 210 |
| CfoI | GCGC | 2 cut(s) | 125, 143 |
| Cfr13I | GGNCC | 1 cut(s) | 287 |
| Csp6I | GTAC | 2 cut(s) | 453, 608 |
| CviAII | CATG | 4 cut(s) | 28, 58, 257, 331 |
| CviJI | RGCY | 8 cut(s) | 26, 78, 169, 187, 200, 361, 427, 569 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 78, 169, 187, 200, 361, 427, 569 |
| CviQI | GTAC | 2 cut(s) | 453, 608 |
| DdeI | CTNAG | 6 cut(s) | 11, 35, 174, 321, 362, 535 |
| DinI | GGCGCC | 1 cut(s) | 142 |
| DpnI | GATC | 3 cut(s) | 255, 374, 557 |
| DpnII | GATC | 3 cut(s) | 253, 372, 555 |
| EaeI | YGGCCR | 1 cut(s) | 24 |
| Eam1104I | CTCTTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 1 cut(s) | 534 |
| EciI | GGCGGA | 1 cut(s) | 208 |
| Eco31I | GGTCTC | 1 cut(s) | 163 |
| Eco47I | GGWCC | 1 cut(s) | 287 |
| Eco57I | CTGAAG | 1 cut(s) | 476 |
| EcoO109I | RGGNCCY | 1 cut(s) | 287 |
| EcoRII | CCWGG | 2 cut(s) | 289, 443 |
| EgeI | GGCGCC | 1 cut(s) | 142 |
| EheI | GGCGCC | 1 cut(s) | 142 |
| FaeI | CATG | 4 cut(s) | 31, 61, 260, 334 |
| FaiI | YATR | 5 cut(s) | 29, 59, 258, 332, 519 |
| FatI | CATG | 4 cut(s) | 27, 57, 256, 330 |
| FauI | CCCGC | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 3 cut(s) | 126, 510, 570 |
| FokI | GGATG | 3 cut(s) | 40, 101, 431 |
| Fsp4HI | GCNGC | 3 cut(s) | 126, 510, 570 |
| FspBI | CTAG | 1 cut(s) | 251 |
| GlaI | GCGC | 2 cut(s) | 124, 142 |
| GluI | GCNGC | 3 cut(s) | 126, 510, 570 |
| GsuI | CTGGAG | 1 cut(s) | 312 |
| HaeII | RGCGCY | 1 cut(s) | 144 |
| HaeIII | GGCC | 1 cut(s) | 26 |
| HapII | CCGG | 4 cut(s) | 105, 118, 138, 144 |
| HhaI | GCGC | 2 cut(s) | 125, 143 |
| Hin1I | GRCGYC | 1 cut(s) | 141 |
| Hin1II | CATG | 4 cut(s) | 31, 61, 260, 334 |
| Hin6I | GCGC | 2 cut(s) | 123, 141 |
| HinP1I | GCGC | 2 cut(s) | 123, 141 |
| HincII | GTYRAC | 1 cut(s) | 181 |
| HindII | GTYRAC | 1 cut(s) | 181 |
| HinfI | GANTC | 5 cut(s) | 108, 134, 336, 408, 448 |
| HpaII | CCGG | 4 cut(s) | 105, 118, 138, 144 |
| HphI | GGTGA | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 4 cut(s) | 181, 307, 328, 455 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 133, 538, 616 |
| Hpy188III | TCNNGA | 1 cut(s) | 641 |
| Hpy8I | GTNNAC | 4 cut(s) | 181, 307, 328, 455 |
| HpyAV | CCTTC | 4 cut(s) | 148, 454, 598, 616 |
| HpyCH4III | ACNGT | 2 cut(s) | 265, 647 |
| HpyCH4V | TGCA | 2 cut(s) | 193, 391 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 120, 218, 566, 597 |
| HpyF3I | CTNAG | 6 cut(s) | 11, 35, 174, 321, 362, 535 |
| Hsp92I | GRCGYC | 1 cut(s) | 141 |
| Hsp92II | CATG | 4 cut(s) | 31, 61, 260, 334 |
| HspAI | GCGC | 2 cut(s) | 123, 141 |
| KasI | GGCGCC | 1 cut(s) | 140 |
| Kzo9I | GATC | 3 cut(s) | 253, 372, 555 |
| LguI | GCTCTTC | 1 cut(s) | 534 |
| LmnI | GCTCC | 3 cut(s) | 101, 205, 424 |
| Lsp1109I | GCAGC | 2 cut(s) | 496, 556 |
| LweI | GCATC | 4 cut(s) | 21, 123, 466, 496 |
| MaeI | CTAG | 1 cut(s) | 251 |
| MaeIII | GTNAC | 4 cut(s) | 259, 365, 464, 641 |
| MalI | GATC | 3 cut(s) | 255, 374, 557 |
| MbiI | CCGCTC | 1 cut(s) | 164 |
| MboI | GATC | 3 cut(s) | 253, 372, 555 |
| MboII | GAAGA | 9 cut(s) | 55, 163, 412, 429, 485, 551, 562, 565, 645 |
| MhlI | GDGCHC | 1 cut(s) | 214 |
| MluCI | AATT | 2 cut(s) | 311, 498 |
| Mly113I | GGCGCC | 1 cut(s) | 141 |
| MlyI | GAGTC | 2 cut(s) | 128, 442 |
| MmeI | TCCRAC | 1 cut(s) | 156 |
| MseI | TTAA | 1 cut(s) | 345 |
| MslI | CAYNNNNRTG | 1 cut(s) | 323 |
| MspI | CCGG | 4 cut(s) | 105, 118, 138, 144 |
| MspR9I | CCNGG | 3 cut(s) | 145, 291, 445 |
| MvaI | CCWGG | 2 cut(s) | 291, 445 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 120, 218, 566, 597 |
| NarI | GGCGCC | 1 cut(s) | 141 |
| NciI | CCSGG | 1 cut(s) | 145 |
| NdeII | GATC | 3 cut(s) | 253, 372, 555 |
| NlaIII | CATG | 4 cut(s) | 31, 61, 260, 334 |
| NlaIV | GGNNCC | 1 cut(s) | 142 |
| NmeAIII | GCCGAG | 2 cut(s) | 145, 226 |
| NmuCI | GTSAC | 2 cut(s) | 365, 641 |
| NspI | RCATGY | 1 cut(s) | 334 |
| OliI | CACNNNNGTG | 1 cut(s) | 323 |
| PciSI | GCTCTTC | 1 cut(s) | 534 |
| PfeI | GAWTC | 3 cut(s) | 108, 336, 408 |
| PkrI | GCNGC | 3 cut(s) | 127, 511, 571 |
| PleI | GAGTC | 2 cut(s) | 128, 442 |
| PluTI | GGCGCC | 1 cut(s) | 144 |
| PpsI | GAGTC | 2 cut(s) | 128, 442 |
| PpuMI | RGGWCCY | 1 cut(s) | 287 |
| Psp5II | RGGWCCY | 1 cut(s) | 287 |
| Psp6I | CCWGG | 2 cut(s) | 289, 443 |
| PspGI | CCWGG | 2 cut(s) | 289, 443 |
| PspN4I | GGNNCC | 1 cut(s) | 142 |
| PspPI | GGNCC | 1 cut(s) | 287 |
| PspPPI | RGGWCCY | 1 cut(s) | 287 |
| RsaI | GTAC | 2 cut(s) | 454, 609 |
| RsaNI | GTAC | 2 cut(s) | 453, 608 |
| RseI | CAYNNNNRTG | 1 cut(s) | 323 |
| SapI | GCTCTTC | 1 cut(s) | 534 |
| SaqAI | TTAA | 1 cut(s) | 345 |
| SatI | GCNGC | 3 cut(s) | 126, 510, 570 |
| Sau3AI | GATC | 3 cut(s) | 253, 372, 555 |
| Sau96I | GGNCC | 1 cut(s) | 287 |
| SchI | GAGTC | 2 cut(s) | 128, 442 |
| ScrFI | CCNGG | 3 cut(s) | 145, 291, 445 |
| SduI | GDGCHC | 1 cut(s) | 214 |
| SfaNI | GCATC | 4 cut(s) | 21, 123, 466, 496 |
| SfoI | GGCGCC | 1 cut(s) | 142 |
| SinI | GGWCC | 1 cut(s) | 287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 323 |
| Sse9I | AATT | 2 cut(s) | 311, 498 |
| SsiI | CCGC | 6 cut(s) | 5, 18, 126, 162, 219, 234 |
| SspDI | GGCGCC | 1 cut(s) | 140 |
| SspMI | CTAG | 1 cut(s) | 251 |
| StyD4I | CCNGG | 3 cut(s) | 143, 289, 443 |
| TaaI | ACNGT | 2 cut(s) | 265, 647 |
| TasI | AATT | 2 cut(s) | 311, 498 |
| TauI | GCSGC | 1 cut(s) | 128 |
| TfiI | GAWTC | 3 cut(s) | 108, 336, 408 |
| Tru1I | TTAA | 1 cut(s) | 345 |
| Tru9I | TTAA | 1 cut(s) | 345 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseFI | GTSAC | 2 cut(s) | 365, 641 |
| TseI | GCWGC | 2 cut(s) | 509, 569 |
| Tsp45I | GTSAC | 2 cut(s) | 365, 641 |
| TspRI | CASTG | 1 cut(s) | 106 |
| VpaK11BI | GGWCC | 1 cut(s) | 287 |
| XceI | RCATGY | 1 cut(s) | 334 |
| XspI | CTAG | 1 cut(s) | 251 |