RLG00000003028

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
43303498 .. 43304352
855 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003028

Sequence Viewer

Length: 855 bp
ATGGCCACAGAGTCGCTACCTATATACTCTCCGGCCTTTTCTATGACCATTAGCTGTGGCTCCTCAACAGGAGTAGAAATCGATCCTGACGGGCGACATTGGGCTGGAGATGTCGGCTCAAAATTTTCCCCCAGAGAAGTAGGAGAACCTGGTTACACATCTGAAGCTACAAAAGCACCACCTCAGTCGTCCTCCACCAGCCAAGTGCCATACAACACAGCCCGCATTTCTCGCTTCGAATTTACTTATAGATTTCCCATTGCTCCAGGCCAAATGTTCGTTCGCTTACATTTCTATCCTGCTTCCTACCCCAACTTCACCCACTCTGAAGCTCACTTCTTTGTCACAGTGGGTCGCTATATCCTTCTCAAAGACTTCAATGCTTCTCTTTTTGCAGATACTGAGGGGGTGGAGACGATATACAAGGAATTCTGTGTGTATAATGACGCAGATGATACTCTAGATCTCACATTTAGTCCCAGCAGGACAAGCTCCAATTCATATGCCTTTATCAATGGAATTGAAATTGTGTCTATGCCACCTGACCTTTACTACAGTACATCTGAGAGTCATAGGCTTAATTATGAGGGAAACAAAGTCAGGTATCACATTGAAAACAGCACAGCTCTTGAGATGGTCTACCGTATCAACATTGGTGGAAAGAGACTCTCATCCATGGAAGACACTGGCATGTACCGCAGTTGGGATGGTAATGATGGCATGTACTTGGATGATTTAAGTAGAAGATTCAGCGTTATACCAGCAAACACGAGTATTCAACTCAAGTTTGGAAGCATACCTGAATACACACTGCGCCGGATGAGGTTTACCGCACTGGCCGTTCAATGGGGATGA

Protein Analysis

285

Amino Acids

32.05

Weight (kDa)

5.41

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 17 - 237 1.1e-09 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 639
AciI CCGC 3 cut(s) 223, 697, 831
AclWI GGATC 1 cut(s) 77
AcoI YGGCCR 2 cut(s) 3, 837
AcsI RAATTY 3 cut(s) 122, 239, 428
AcuI CTGAAG 2 cut(s) 183, 348
AfaI GTAC 3 cut(s) 559, 695, 725
AfiI CCNNNNNNNGG 2 cut(s) 703, 846
AgsI TTSAA 5 cut(s) 379, 524, 614, 779, 845
AjnI CCWGG 2 cut(s) 148, 265
AjuI GAANNNNNNNTTGG 2 cut(s) 264, 296
AluBI AGCT 5 cut(s) 54, 167, 332, 492, 626
AluI AGCT 5 cut(s) 54, 167, 332, 492, 626
Alw26I GTCTC 2 cut(s) 407, 658
AlwI GGATC 1 cut(s) 77
AlwNI CAGNNNCTG 1 cut(s) 401
AoxI GGCC 4 cut(s) 3, 33, 268, 837
ApoI RAATTY 3 cut(s) 122, 239, 428
AspLEI GCGC 1 cut(s) 816
AsuHPI GGTGA 1 cut(s) 310
AsuII TTCGAA 1 cut(s) 237
BalI TGGCCA 1 cut(s) 5
BauI CACGAG 1 cut(s) 769
BbsI GAAGAC 1 cut(s) 687
BccI CCATC 3 cut(s) 628, 701, 710
BceAI ACGGC 1 cut(s) 824
BciT130I CCWGG 2 cut(s) 150, 267
BcoDI GTCTC 2 cut(s) 407, 658
BfaI CTAG 1 cut(s) 461
BfmI CTRYAG 1 cut(s) 553
BglII AGATCT 1 cut(s) 463
Bme1390I CCNGG 2 cut(s) 150, 267
BmiI GGNNCC 1 cut(s) 61
BmrFI CCNGG 2 cut(s) 150, 267
BpiI GAAGAC 1 cut(s) 687
BpmI CTGGAG 2 cut(s) 126, 249
Bpu14I TTCGAA 1 cut(s) 237
BpuEI CTTGAG 2 cut(s) 650, 767
Bsa29I ATCGAT 1 cut(s) 81
BsaJI CCNNGG 1 cut(s) 675
Bsc4I CCNNNNNNNGG 2 cut(s) 703, 846
Bse1I ACTGG 2 cut(s) 691, 840
Bse3DI GCAATG 1 cut(s) 258
BseBI CCWGG 2 cut(s) 150, 267
BseCI ATCGAT 1 cut(s) 81
BseDI CCNNGG 1 cut(s) 675
BseGI GGATG 4 cut(s) 671, 712, 736, 825
BseLI CCNNNNNNNGG 2 cut(s) 703, 846
BseMI GCAATG 1 cut(s) 258
BseMII CTCAG 3 cut(s) 197, 393, 555
BseNI ACTGG 2 cut(s) 691, 840
BseRI GAGGAG 1 cut(s) 52
BseYI CCCAGC 1 cut(s) 479
BshFI GGCC 4 cut(s) 5, 35, 270, 839
BshVI ATCGAT 1 cut(s) 81
BsiSI CCGG 2 cut(s) 32, 817
BslFI GGGAC 1 cut(s) 462
BslI CCNNNNNNNGG 2 cut(s) 703, 846
BsmAI GTCTC 2 cut(s) 407, 658
BsmBI CGTCTC 1 cut(s) 407
BsmFI GGGAC 1 cut(s) 462
BsnI GGCC 4 cut(s) 5, 35, 270, 839
Bsp119I TTCGAA 1 cut(s) 237
Bsp143I GATC 2 cut(s) 82, 463
Bsp19I CCATGG 1 cut(s) 675
BspACI CCGC 3 cut(s) 223, 697, 831
BspANI GGCC 4 cut(s) 5, 35, 270, 839
BspCNI CTCAG 3 cut(s) 196, 394, 556
BspDI ATCGAT 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 61
BspPI GGATC 1 cut(s) 77
BspT104I TTCGAA 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 258
BsrI ACTGG 2 cut(s) 691, 840
BssECI CCNNGG 1 cut(s) 675
BssMI GATC 2 cut(s) 82, 463
BssSI CACGAG 1 cut(s) 769
BssT1I CCWWGG 1 cut(s) 675
Bst2BI CACGAG 1 cut(s) 769
Bst2UI CCWGG 2 cut(s) 150, 267
Bst4CI ACNGT 3 cut(s) 349, 557, 644
BstBI TTCGAA 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 223
BstDEI CTNAG 3 cut(s) 183, 402, 564
BstDSI CCRYGG 1 cut(s) 675
BstF5I GGATG 4 cut(s) 671, 712, 736, 825
BstHHI GCGC 1 cut(s) 816
BstKTI GATC 2 cut(s) 85, 466
BstMAI GTCTC 2 cut(s) 407, 658
BstMBI GATC 2 cut(s) 82, 463
BstMWI GCNNNNNNNGC 4 cut(s) 173, 231, 489, 696
BstNI CCWGG 2 cut(s) 150, 267
BstNSI RCATGY 2 cut(s) 694, 724
BstSCI CCNGG 2 cut(s) 148, 265
BstSFI CTRYAG 1 cut(s) 553
BstV2I GAAGAC 1 cut(s) 687
BstX2I RGATCY 1 cut(s) 463
BstYI RGATCY 1 cut(s) 463
Bsu15I ATCGAT 1 cut(s) 81
BsuRI GGCC 4 cut(s) 5, 35, 270, 839
BsuTUI ATCGAT 1 cut(s) 81
BtgI CCRYGG 1 cut(s) 675
BtsCI GGATG 4 cut(s) 671, 712, 736, 825
BtsI GCAGTG 1 cut(s) 809
BtsIMutI CAGTG 4 cut(s) 354, 684, 809, 833
Cac8I GCNNGC 1 cut(s) 223
CaiI CAGNNNCTG 1 cut(s) 401
CfoI GCGC 1 cut(s) 816
ClaI ATCGAT 1 cut(s) 81
CseI GACGC 1 cut(s) 455
CsiI ACCWGGT 1 cut(s) 148
Csp6I GTAC 3 cut(s) 558, 694, 724
CspCI CAANNNNNGTGG 2 cut(s) 637, 672
CviAII CATG 3 cut(s) 676, 691, 721
CviQI GTAC 3 cut(s) 558, 694, 724
DdeI CTNAG 3 cut(s) 183, 402, 564
DpnI GATC 2 cut(s) 84, 465
DpnII GATC 2 cut(s) 82, 463
EaeI YGGCCR 2 cut(s) 3, 837
Eco130I CCWWGG 1 cut(s) 675
Eco57I CTGAAG 2 cut(s) 183, 348
EcoRI GAATTC 1 cut(s) 428
EcoRII CCWGG 2 cut(s) 148, 265
EcoT14I CCWWGG 1 cut(s) 675
ErhI CCWWGG 1 cut(s) 675
Esp3I CGTCTC 1 cut(s) 407
FaeI CATG 3 cut(s) 679, 694, 724
FaqI GGGAC 1 cut(s) 462
FatI CATG 3 cut(s) 675, 690, 720
FauI CCCGC 1 cut(s) 230
FauNDI CATATG 1 cut(s) 502
FblI GTMKAC 1 cut(s) 639
FokI GGATG 4 cut(s) 658, 719, 743, 832
FspBI CTAG 1 cut(s) 461
GlaI GCGC 1 cut(s) 815
GsaI CCCAGC 1 cut(s) 483
GsuI CTGGAG 2 cut(s) 126, 249
HaeIII GGCC 4 cut(s) 5, 35, 270, 839
HapII CCGG 2 cut(s) 32, 817
HgaI GACGC 1 cut(s) 455
HhaI GCGC 1 cut(s) 816
Hin1II CATG 3 cut(s) 679, 694, 724
Hin6I GCGC 1 cut(s) 814
HinP1I GCGC 1 cut(s) 814
HinfI GANTC 4 cut(s) 11, 568, 666, 747
HpaII CCGG 2 cut(s) 32, 817
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 2 cut(s) 640, 828
Hpy188I TCNGA 3 cut(s) 163, 328, 565
Hpy188III TCNNGA 3 cut(s) 86, 461, 629
Hpy8I GTNNAC 2 cut(s) 640, 828
HpyAV CCTTC 1 cut(s) 374
HpyCH4III ACNGT 3 cut(s) 349, 557, 644
HpyCH4V TGCA 1 cut(s) 395
HpyF10VI GCNNNNNNNGC 4 cut(s) 173, 231, 489, 696
HpyF3I CTNAG 3 cut(s) 183, 402, 564
Hsp92II CATG 3 cut(s) 679, 694, 724
HspAI GCGC 1 cut(s) 814
Kzo9I GATC 2 cut(s) 82, 463
LmnI GCTCC 3 cut(s) 65, 268, 497
MabI ACCWGGT 1 cut(s) 148
MaeI CTAG 1 cut(s) 461
MaeIII GTNAC 2 cut(s) 152, 343
MalI GATC 2 cut(s) 84, 465
MboI GATC 2 cut(s) 82, 463
MboII GAAGA 2 cut(s) 692, 756
MflI RGATCY 1 cut(s) 463
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 122, 239, 428, 496, 519, 525, 580
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 20, 577, 660
MnlI CCTC 6 cut(s) 73, 192, 202, 397, 580, 816
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 579, 737
MslI CAYNNNNRTG 1 cut(s) 689
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 32, 817
MspR9I CCNGG 2 cut(s) 150, 267
MvaI CCWGG 2 cut(s) 150, 267
MwoI GCNNNNNNNGC 4 cut(s) 173, 231, 489, 696
NcoI CCATGG 1 cut(s) 675
NdeI CATATG 1 cut(s) 502
NdeII GATC 2 cut(s) 82, 463
NlaIII CATG 3 cut(s) 679, 694, 724
NlaIV GGNNCC 1 cut(s) 61
NmuCI GTSAC 1 cut(s) 343
NspI RCATGY 2 cut(s) 694, 724
NspV TTCGAA 1 cut(s) 237
PfeI GAWTC 1 cut(s) 747
PleI GAGTC 3 cut(s) 19, 576, 660
PpsI GAGTC 3 cut(s) 19, 576, 660
Psp6I CCWGG 2 cut(s) 148, 265
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 2 cut(s) 148, 265
PspN4I GGNNCC 1 cut(s) 61
PstNI CAGNNNCTG 1 cut(s) 401
PsuI RGATCY 1 cut(s) 463
RsaI GTAC 3 cut(s) 559, 695, 725
RsaNI GTAC 3 cut(s) 558, 694, 724
RseI CAYNNNNRTG 1 cut(s) 689
SaqAI TTAA 2 cut(s) 579, 737
Sau3AI GATC 2 cut(s) 82, 463
SchI GAGTC 3 cut(s) 20, 577, 660
ScrFI CCNGG 2 cut(s) 150, 267
SexAI ACCWGGT 1 cut(s) 148
SfcI CTRYAG 1 cut(s) 553
SfuI TTCGAA 1 cut(s) 237
SmiMI CAYNNNNRTG 1 cut(s) 689
SmlI CTYRAG 2 cut(s) 629, 782
SmoI CTYRAG 2 cut(s) 629, 782
Sse9I AATT 7 cut(s) 122, 239, 428, 496, 519, 525, 580
SsiI CCGC 3 cut(s) 223, 697, 831
SspMI CTAG 1 cut(s) 461
StyD4I CCNGG 2 cut(s) 148, 265
StyI CCWWGG 1 cut(s) 675
TaaI ACNGT 3 cut(s) 349, 557, 644
TaqI TCGA 2 cut(s) 81, 237
TasI AATT 7 cut(s) 122, 239, 428, 496, 519, 525, 580
TatI WGTACW 2 cut(s) 557, 723
TfiI GAWTC 1 cut(s) 747
Tru1I TTAA 2 cut(s) 579, 737
Tru9I TTAA 2 cut(s) 579, 737
TscAI CASTG 4 cut(s) 354, 691, 816, 840
TseFI GTSAC 1 cut(s) 343
Tsp45I GTSAC 1 cut(s) 343
TspDTI ATGAA 1 cut(s) 489
TspRI CASTG 4 cut(s) 354, 691, 816, 840
XapI RAATTY 3 cut(s) 122, 239, 428
XbaI TCTAGA 1 cut(s) 460
XceI RCATGY 2 cut(s) 694, 724
XmiI GTMKAC 1 cut(s) 639
XspI CTAG 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.