Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

35685460 .. 35688048

Gene Structure 2589 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00194020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGAAACCTATTATCGTCCCTCTTTACCCTTCCAGCTTGTTTCTACTCTTCGTCACCCTACTAGTGGCAGGAGAGTCCGCACCTATCTACTCTCCAATCAATAATATCACCCTTAAATGCGGCTTTTCCGGCGACACTGTCAGTAATTATGATTTTCAAACTTGGACGGGAGACATCAACTCAAAGTTTTTCCCCAAAGAAGCTGGTAGCACATCCCAAGTCGCAAAAGCACCACCGTCGTCCTCCACCGGCAGCCAAGTGCCATTCACCACAGCTCGGCTTTCTCACTCGGAATTCACTTACAAATTTCCCGTAAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCCCAGCTACATACAACGCGGACTTCGACCACTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACACACTTCTCAAGGACTTCAACGCTTCTCTCGGTAGTATTTACGATGGCTCTGAGACACTACTCAGAGAATTCTGCCTTAACTTTGAGCCAGATCAGCTGAGTCTGAACATCACATTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTCGGCAGCCCAAGGCGATGGGGCTAGTTATCTCGGCAGCAGCGATAGCAGATATTATGTTGAAAACAACACCGCTCTGGAGATGATCTTCCGAATCAACATTGGTGGCAGCCCAGTATCTCCAAATGAAGACACCGGCATGTACCGCACCTGGAATCTATTAGACGAGTGGTACTTAGATGATCTAAGTAGAACTTTGAGCTTTGCACAAAGCTATAATACTCCTCTCAATTTTGCAAGAATCCCCAACTACACTGCGCCCGAAGTGGTGTACCGAACGGGCCGGACAATGGGAGGGAACAACACCATCAACAAGAGCTACAATCTCACTTGGGGATTCCCTGTATATCCCGACTTTTCTTACCTGGTGAGGCTCCATTTCTGTGAGATTGATCCGAATATTACCATGGCTAGAGATAGATTGTTTCAGATTTTCATAGCTAATTTTACAGCTGAACCGCAAGCAGACATAATCAGATGGACTACAGAAAATGGAATCGGAAATGGGATTCCCATATATAGGGACTACTTTGTGCCGATGCTGAATCTTGGAACCCAGAAGAAAGGTTTTGTTAATCTCTTTGTTGCACTACAAGCATATCCAGACGATAGCCAAACTCGATATAACGATGCAATCTTGAATGGGCTGGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGGCCCATCCCCGAGCTACCGAATATCCCGCCAAAGGTGACGTCGGAAAGCTCTAGAAACTCGAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGGTGTAGTTTCGGCCTTACTTGTTCTTTCCTTCCTCGGGTTTTTAGTTTTCAGGCGTGGAGGAAAAGTCAAGGATTCCAACTCCAGCCACAGGATGACGACGTCAACCATGACCCTTAGATCACCTTATCCATCTCATTTGTGCCGTGACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAAAACTTCGATGACACTTTAATCATTGGAGTTGGTGGGTTTGGCCATGTCTACAAAGGATACTTCGACAATGGGGCCACCCTTGTGGCAATCAAAAGGCTGAAAGCCACTTCATCGCAGGGCGCCCACGAGTTCATGACGGAAATCAAAATGCTCTCCCGATTGCGCCACTGTCATTTGGTTTCTCTTATAGGATTTTGTGCCGATCAAGGTGAGATGATCTTAGTCTACGATTACATGGCACATGGGACCCTCAGTGATCATTTGCACCGGACCAAGGAACCACATCTTCCTTGGAAACTACGGCTTCACATTTGTATTGGTGCAGCACAAGGTTTGCACTACCTTCACACAGGTACTGAAGGCACCATCATTCACCGTGACGTAAAGAGCGCAAACATATTATTAGACGAGAAATGGGTAGCGAAGGTTTCAGATTTTGGGTTGTCAAAAAAGGGCATTATCACAATATCCAAGACCCACATTAGCACGAAGGTGAAGGGTAGTTTTGGATATCTTGACCCTGATTACTACCGACGTCAACAACTGACTGAGAAGTCTGACGTGTATTCATTCGGCGTAGTGTTATGCGAGGTATTGTGTGGGAGGCCAGCTGTGACCATTGTAGATAATAATAGAGTTGGGCTAGCTGGATGGGTCAAGAAGTGTCATCATGAAGGGAAACTTGATCAAGTTGTTGACCCCAATTTGGAAGGTGAAATTGCATTGCGATGCTTGCATAAATTTGTTTCCATCGCAATCAGTTGCATGGATGATAATGGGATCAATCGGCCGTCAATGGAGAATGTTGTGAGAGGGCTTCAATTTGCATTTGAAATGCAACAGAACAACGAGAATTATATTGATCACATTGAAAGGAAGGTTCAAGATGAGATTGGATTGATCAAGGACAATGAAGGGTCTAGTTCTAGAGAGCGAAGCAGTGGGGCTACAGAATCCATCCAAAGGTTGACCGGGACAATCTTCTCCGAGATCATCGATCCAGTTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

862

Amino Acids

96.05

Weight (kDa)

6.77

Isoelectric Point (pI)

37.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	39 - 422	9e-26	Malectin-like domain
Pkinase	PF00069	532 - 795	5.8e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	533 - 797	4.8e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2128
AatII	GACGTC	3 cut(s)	1337, 1496, 2113
AccB1I	GGYRCC	2 cut(s)	1694, 1937
AccBSI	CCGCTC	1 cut(s)	680
AccI	GTMKAC	3 cut(s)	1367, 1623, 1800
AccII	CGCG	1 cut(s)	368
AclWI	GGATC	4 cut(s)	578, 992, 2363, 2567
AcoI	YGGCCR	2 cut(s)	1615, 2363
AcsI	RAATTY	4 cut(s)	293, 305, 485, 2315
AcuI	CTGAAG	1 cut(s)	1953
AcyI	GRCGYC	4 cut(s)	1334, 1493, 1695, 2110
AfaI	GTAC	4 cut(s)	749, 779, 878, 1930
AflIII	ACRYGT	1 cut(s)	2136
AgsI	TTSAA	9 cut(s)	158, 436, 668, 1246, 1264, 2396, 2408, 2447, 2459
AhlI	ACTAGT	1 cut(s)	61
AjiI	CACGTC	1 cut(s)	2137
AjnI	CCWGG	4 cut(s)	319, 543, 755, 969
AleI	CACNNNNGTG	2 cut(s)	1655, 2066
Alw26I	GTCTC	2 cut(s)	165, 464
AlwI	GGATC	4 cut(s)	578, 992, 2363, 2567
AlwNI	CAGNNNCTG	1 cut(s)	1931
Ama87I	CYCGRG	2 cut(s)	1304, 1427
AoxI	GGCC	8 cut(s)	322, 886, 1295, 1404, 1615, 1647, 2180, 2363
ApaI	GGGCCC	1 cut(s)	1299
ApeKI	GCWGC	6 cut(s)	252, 611, 642, 645, 714, 1898
ApoI	RAATTY	4 cut(s)	293, 305, 485, 2315
ArsI	GACNNNNNNTTYG	4 cut(s)	1319, 1349, 1351, 1381
AspLEI	GCGC	4 cut(s)	865, 1697, 1740, 1967
AspS9I	GGNCC	6 cut(s)	886, 1295, 1296, 1647, 1821, 1845
AsuC2I	CCSGG	1 cut(s)	2548
AsuNHI	GCTAGC	1 cut(s)	2218
AvaI	CYCGRG	2 cut(s)	1304, 1427
AvaII	GGWCC	2 cut(s)	1821, 1845
BaeGI	GKGCMC	1 cut(s)	1299
BalI	TGGCCA	1 cut(s)	1617
BanI	GGYRCC	2 cut(s)	1694, 1937
BanII	GRGCYC	1 cut(s)	1299
BauI	CACGAG	1 cut(s)	1700
BbsI	GAAGAC	1 cut(s)	741
BbvI	GCAGC	6 cut(s)	264, 623, 654, 657, 726, 1910
BceAI	ACGGC	4 cut(s)	1297, 1521, 1892, 2350
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1357, 1391
BciT130I	CCWGG	4 cut(s)	321, 545, 757, 971
BciVI	GTATCC	2 cut(s)	545, 1625
BclI	TGATCA	4 cut(s)	1831, 2260, 2437, 2475
BcnI	CCSGG	1 cut(s)	2548
BcoDI	GTCTC	2 cut(s)	165, 464
BcuI	ACTAGT	1 cut(s)	61
BfaI	CTAG	7 cut(s)	62, 630, 1017, 1347, 2219, 2496, 2502
BfmI	CTRYAG	2 cut(s)	1089, 2523
BfoI	RGCGCY	1 cut(s)	1698
BfuI	GTATCC	2 cut(s)	545, 1625
BisI	GCNGC	8 cut(s)	121, 253, 612, 643, 646, 715, 1566, 1899
BlsI	GCNGC	8 cut(s)	122, 254, 613, 644, 647, 716, 1567, 1900
Bme1390I	CCNGG	5 cut(s)	321, 545, 757, 971, 2548
Bme18I	GGWCC	2 cut(s)	1821, 1845
BmeT110I	CYCGRG	2 cut(s)	1304, 1427
BmgBI	CACGTC	1 cut(s)	2137
BmgT120I	GGNCC	6 cut(s)	886, 1295, 1296, 1647, 1821, 1845
BmiI	GGNNCC	9 cut(s)	980, 1159, 1297, 1648, 1696, 1822, 1823, 1854, 1939
BmrFI	CCNGG	5 cut(s)	321, 545, 757, 971, 2548
BmrI	ACTGGG	1 cut(s)	713
BmsI	GCATC	3 cut(s)	1134, 1225, 2294
BmtI	GCTAGC	1 cut(s)	2222
BmuI	ACTGGG	1 cut(s)	713
BpiI	GAAGAC	1 cut(s)	741
BpmI	CTGGAG	2 cut(s)	704, 1459
BpuEI	CTTGAG	1 cut(s)	410
BpuMI	CCSGG	1 cut(s)	2548
Bsa29I	ATCGAT	1 cut(s)	2571
BsaBI	GATNNNNATC	1 cut(s)	575
BsaHI	GRCGYC	4 cut(s)	1334, 1493, 1695, 2110
BsaJI	CCNNGG	6 cut(s)	544, 616, 1011, 1426, 1848, 1865
BsaWI	WCCGGW	1 cut(s)	1842
BsaXI	ACNNNNNCTCC	4 cut(s)	520, 550, 1443, 1473
Bse118I	RCCGGY	4 cut(s)	248, 407, 740, 1391
Bse1I	ACTGG	3 cut(s)	719, 1554, 2576
Bse3DI	GCAATG	1 cut(s)	2297
Bse8I	GATNNNNATC	1 cut(s)	575
BseBI	CCWGG	4 cut(s)	321, 545, 757, 971
BseCI	ATCGAT	1 cut(s)	2571
BseDI	CCNNGG	6 cut(s)	544, 616, 1011, 1426, 1848, 1865
BseGI	GGATG	7 cut(s)	212, 333, 1299, 1491, 2231, 2350, 2532
BseJI	GATNNNNATC	1 cut(s)	575
BseMI	GCAATG	1 cut(s)	2297
BseMII	CTCAG	5 cut(s)	459, 493, 506, 1840, 2115
BseNI	ACTGG	3 cut(s)	719, 1554, 2576
BseRI	GAGGAG	1 cut(s)	819
BseSI	GKGCMC	1 cut(s)	1299
BseX3I	CGGCCG	1 cut(s)	2363
BseXI	GCAGC	6 cut(s)	264, 623, 654, 657, 726, 1910
BseYI	CCCAGC	2 cut(s)	352, 539
BsgI	GTGCAG	1 cut(s)	1917
Bsh1236I	CGCG	1 cut(s)	368
Bsh1285I	CGRYCG	1 cut(s)	2366
BshFI	GGCC	8 cut(s)	324, 888, 1297, 1406, 1617, 1649, 2182, 2365
BshNI	GGYRCC	2 cut(s)	1694, 1937
BshVI	ATCGAT	1 cut(s)	2571
BsiEI	CGRYCG	1 cut(s)	2366
BsiHKCI	CYCGRG	2 cut(s)	1304, 1427
BsiSI	CCGG	8 cut(s)	129, 249, 408, 741, 889, 1392, 1843, 2547
BslFI	GGGAC	4 cut(s)	2, 1142, 1834, 2563
BsmAI	GTCTC	2 cut(s)	165, 464
BsmFI	GGGAC	4 cut(s)	2, 1142, 1834, 2563
BsnI	GGCC	8 cut(s)	324, 888, 1297, 1406, 1617, 1649, 2182, 2365
BsoBI	CYCGRG	2 cut(s)	1304, 1427
Bsp120I	GGGCCC	1 cut(s)	1295
Bsp1286I	GDGCHC	1 cut(s)	1299
Bsp19I	CCATGG	1 cut(s)	1011
BspANI	GGCC	8 cut(s)	324, 888, 1297, 1406, 1617, 1649, 2182, 2365
BspCNI	CTCAG	5 cut(s)	460, 492, 507, 1839, 2116
BspDI	ATCGAT	1 cut(s)	2571
BspFNI	CGCG	1 cut(s)	368
BspHI	TCATGA	2 cut(s)	1707, 2245
BspLI	GGNNCC	9 cut(s)	980, 1159, 1297, 1648, 1696, 1822, 1823, 1854, 1939
BspOI	GCTAGC	1 cut(s)	2222
BspPI	GGATC	4 cut(s)	578, 992, 2363, 2567
BspT107I	GGYRCC	2 cut(s)	1694, 1937
BsrBI	CCGCTC	1 cut(s)	680
BsrDI	GCAATG	1 cut(s)	2297
BsrFI	RCCGGY	4 cut(s)	248, 407, 740, 1391
BsrI	ACTGG	3 cut(s)	719, 1554, 2576
BssAI	RCCGGY	4 cut(s)	248, 407, 740, 1391
BssECI	CCNNGG	6 cut(s)	544, 616, 1011, 1426, 1848, 1865
BssNI	GRCGYC	4 cut(s)	1334, 1493, 1695, 2110
BssSI	CACGAG	1 cut(s)	1700
BssT1I	CCWWGG	4 cut(s)	616, 1011, 1848, 1865
Bst2BI	CACGAG	1 cut(s)	1700
Bst2UI	CCWGG	4 cut(s)	321, 545, 757, 971
Bst4CI	ACNGT	4 cut(s)	139, 237, 1745, 1952
Bst6I	CTCTTC	1 cut(s)	53
BstACI	GRCGYC	4 cut(s)	1334, 1493, 1695, 2110
BstC8I	GCNNGC	6 cut(s)	1068, 1295, 1380, 2184, 2220, 2309
BstDEI	CTNAG	9 cut(s)	468, 479, 515, 781, 791, 1508, 1795, 1826, 2124
BstDSI	CCRYGG	1 cut(s)	1011
BstF5I	GGATG	7 cut(s)	212, 333, 1299, 1491, 2231, 2350, 2532
BstFNI	CGCG	1 cut(s)	368
BstH2I	RGCGCY	1 cut(s)	1698
BstHHI	GCGC	4 cut(s)	865, 1697, 1740, 1967
BstMAI	GTCTC	2 cut(s)	165, 464
BstMCI	CGRYCG	1 cut(s)	2366
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 511, 651, 750, 1199, 1290, 1388, 2308
BstNI	CCWGG	4 cut(s)	321, 545, 757, 971
BstNSI	RCATGY	1 cut(s)	748
BstSCI	CCNGG	5 cut(s)	319, 543, 755, 969, 2546
BstSFI	CTRYAG	2 cut(s)	1089, 2523
BstSLI	GKGCMC	1 cut(s)	1299
BstUI	CGCG	1 cut(s)	368
BstV1I	GCAGC	6 cut(s)	264, 623, 654, 657, 726, 1910
BstV2I	GAAGAC	1 cut(s)	741
BstXI	CCANNNNNNTGG	2 cut(s)	623, 1657
BstZI	CGGCCG	1 cut(s)	2363
Bsu15I	ATCGAT	1 cut(s)	2571
BsuI	GTATCC	2 cut(s)	545, 1625
BsuRI	GGCC	8 cut(s)	324, 888, 1297, 1406, 1617, 1649, 2182, 2365
BsuTUI	ATCGAT	1 cut(s)	2571
BtgI	CCRYGG	1 cut(s)	1011
BtgZI	GCGATG	4 cut(s)	636, 1671, 2311, 2317
BtrI	CACGTC	1 cut(s)	2137
BtsCI	GGATG	7 cut(s)	212, 333, 1299, 1491, 2231, 2350, 2532
BtsI	GCAGTG	2 cut(s)	858, 2521
BtsIMutI	CAGTG	6 cut(s)	135, 858, 1547, 1741, 1834, 2521
Cac8I	GCNNGC	6 cut(s)	1068, 1295, 1380, 2184, 2220, 2309
CaiI	CAGNNNCTG	1 cut(s)	1931
CciI	TCATGA	2 cut(s)	1707, 2245
CfoI	GCGC	4 cut(s)	865, 1697, 1740, 1967
Cfr10I	RCCGGY	4 cut(s)	248, 407, 740, 1391
Cfr13I	GGNCC	6 cut(s)	886, 1295, 1296, 1647, 1821, 1845
ClaI	ATCGAT	1 cut(s)	2571
CsiI	ACCWGGT	1 cut(s)	969
Csp6I	GTAC	4 cut(s)	748, 778, 877, 1929
CspCI	CAANNNNNGTGG	4 cut(s)	391, 426, 691, 726
CviQI	GTAC	4 cut(s)	748, 778, 877, 1929
DdeI	CTNAG	9 cut(s)	468, 479, 515, 781, 791, 1508, 1795, 1826, 2124
DinI	GGCGCC	1 cut(s)	1696
DrdI	GACNNNNNNGTC	1 cut(s)	2128
DseDI	GACNNNNNNGTC	1 cut(s)	2128
EaeI	YGGCCR	2 cut(s)	1615, 2363
EagI	CGGCCG	1 cut(s)	2363
Eam1104I	CTCTTC	1 cut(s)	53
EarI	CTCTTC	1 cut(s)	53
EclXI	CGGCCG	1 cut(s)	2363
Eco130I	CCWWGG	4 cut(s)	616, 1011, 1848, 1865
Eco24I	GRGCYC	1 cut(s)	1299
Eco32I	GATATC	1 cut(s)	2087
Eco47I	GGWCC	2 cut(s)	1821, 1845
Eco52I	CGGCCG	1 cut(s)	2363
Eco57I	CTGAAG	1 cut(s)	1953
Eco88I	CYCGRG	2 cut(s)	1304, 1427
EcoO109I	RGGNCCY	1 cut(s)	1821
EcoRI	GAATTC	2 cut(s)	293, 485
EcoRII	CCWGG	4 cut(s)	319, 543, 755, 969
EcoRV	GATATC	1 cut(s)	2087
EcoT14I	CCWWGG	4 cut(s)	616, 1011, 1848, 1865
EcoT38I	GRGCYC	1 cut(s)	1299
EgeI	GGCGCC	1 cut(s)	1696
EheI	GGCGCC	1 cut(s)	1696
ErhI	CCWWGG	4 cut(s)	616, 1011, 1848, 1865
FalI	AAGNNNNNCTT	4 cut(s)	784, 816, 2241, 2273
FaqI	GGGAC	4 cut(s)	2, 1142, 1834, 2563
FauI	CCCGC	2 cut(s)	1286, 1329
FbaI	TGATCA	4 cut(s)	1831, 2260, 2437, 2475
FblI	GTMKAC	3 cut(s)	1367, 1623, 1800
Fnu4HI	GCNGC	8 cut(s)	121, 253, 612, 643, 646, 715, 1566, 1899
FokI	GGATG	7 cut(s)	199, 320, 1286, 1498, 2238, 2357, 2519
FriOI	GRGCYC	1 cut(s)	1299
Fsp4HI	GCNGC	8 cut(s)	121, 253, 612, 643, 646, 715, 1566, 1899
FspBI	CTAG	7 cut(s)	62, 630, 1017, 1347, 2219, 2496, 2502
GlaI	GCGC	4 cut(s)	864, 1696, 1739, 1966
GluI	GCNGC	8 cut(s)	121, 253, 612, 643, 646, 715, 1566, 1899
GsaI	CCCAGC	2 cut(s)	356, 543
GsuI	CTGGAG	2 cut(s)	704, 1459
HaeII	RGCGCY	1 cut(s)	1698
HaeIII	GGCC	8 cut(s)	324, 888, 1297, 1406, 1617, 1649, 2182, 2365
HapII	CCGG	8 cut(s)	129, 249, 408, 741, 889, 1392, 1843, 2547
HhaI	GCGC	4 cut(s)	865, 1697, 1740, 1967
Hin1I	GRCGYC	4 cut(s)	1334, 1493, 1695, 2110
Hin6I	GCGC	4 cut(s)	863, 1695, 1738, 1965
HinP1I	GCGC	4 cut(s)	863, 1695, 1738, 1965
HincII	GTYRAC	5 cut(s)	1368, 1497, 2114, 2272, 2544
HindII	GTYRAC	5 cut(s)	1368, 1497, 2114, 2272, 2544
HpaII	CCGG	8 cut(s)	129, 249, 408, 741, 889, 1392, 1843, 2547
Hpy166II	GTNNAC	8 cut(s)	877, 1368, 1497, 1624, 1801, 2114, 2272, 2544
Hpy8I	GTNNAC	8 cut(s)	877, 1368, 1497, 1624, 1801, 2114, 2272, 2544
Hpy99I	CGWCG	4 cut(s)	241, 1339, 1495, 2112
HpyCH4III	ACNGT	4 cut(s)	139, 237, 1745, 1952
HpyCH4IV	ACGT	5 cut(s)	1334, 1493, 1956, 2110, 2136
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 511, 651, 750, 1199, 1290, 1388, 2308
HpyF3I	CTNAG	9 cut(s)	468, 479, 515, 781, 791, 1508, 1795, 1826, 2124
HpySE526I	ACGT	5 cut(s)	1334, 1493, 1956, 2110, 2136
Hsp92I	GRCGYC	4 cut(s)	1334, 1493, 1695, 2110
HspAI	GCGC	4 cut(s)	863, 1695, 1738, 1965
KasI	GGCGCC	1 cut(s)	1694
KflI	GGGWCCC	1 cut(s)	1821
Ksp22I	TGATCA	4 cut(s)	1831, 2260, 2437, 2475
LmnI	GCTCC	1 cut(s)	984
Lsp1109I	GCAGC	6 cut(s)	264, 623, 654, 657, 726, 1910
LweI	GCATC	3 cut(s)	1134, 1225, 2294
MabI	ACCWGGT	1 cut(s)	969
MaeI	CTAG	7 cut(s)	62, 630, 1017, 1347, 2219, 2496, 2502
MaeII	ACGT	5 cut(s)	1334, 1493, 1956, 2110, 2136
MaeIII	GTNAC	5 cut(s)	52, 1330, 1538, 1952, 2188
MbiI	CCGCTC	1 cut(s)	680
MhlI	GDGCHC	1 cut(s)	1299
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
Mly113I	GGCGCC	1 cut(s)	1695
MlyI	GAGTC	3 cut(s)	83, 526, 1363
MmeI	TCCRAC	2 cut(s)	1317, 1494
Mox20I	TGGCCA	1 cut(s)	1617
MscI	TGGCCA	1 cut(s)	1617
MseI	TTAA	5 cut(s)	114, 495, 564, 1179, 1592
MslI	CAYNNNNRTG	6 cut(s)	584, 743, 987, 1655, 2066, 2302
Msp20I	TGGCCA	1 cut(s)	1617
MspA1I	CMGCKG	3 cut(s)	514, 1058, 2186
MspI	CCGG	8 cut(s)	129, 249, 408, 741, 889, 1392, 1843, 2547
MspR9I	CCNGG	5 cut(s)	321, 545, 757, 971, 2548
MvaI	CCWGG	4 cut(s)	321, 545, 757, 971
MvnI	CGCG	1 cut(s)	368
MwoI	GCNNNNNNNGC	8 cut(s)	129, 511, 651, 750, 1199, 1290, 1388, 2308
NarI	GGCGCC	1 cut(s)	1695
NciI	CCSGG	1 cut(s)	2548
NcoI	CCATGG	1 cut(s)	1011
NheI	GCTAGC	1 cut(s)	2218
NlaIV	GGNNCC	9 cut(s)	980, 1159, 1297, 1648, 1696, 1822, 1823, 1854, 1939
NmeAIII	GCCGAG	4 cut(s)	256, 587, 618, 1269
NmuCI	GTSAC	5 cut(s)	52, 1330, 1538, 1952, 2188
NspI	RCATGY	1 cut(s)	748
OliI	CACNNNNGTG	2 cut(s)	1655, 2066
PagI	TCATGA	2 cut(s)	1707, 2245
PcsI	WCGNNNNNNNCGW	2 cut(s)	372, 645
PfeI	GAWTC	9 cut(s)	699, 760, 846, 942, 1101, 1114, 1150, 1466, 2528
PflFI	GACNNNGTC	2 cut(s)	137, 1492
PkrI	GCNGC	8 cut(s)	122, 254, 613, 644, 647, 716, 1567, 1900
PleI	GAGTC	3 cut(s)	82, 525, 1363
PluTI	GGCGCC	1 cut(s)	1698
PpsI	GAGTC	3 cut(s)	82, 525, 1363
PpuMI	RGGWCCY	1 cut(s)	1821
Psp5II	RGGWCCY	1 cut(s)	1821
Psp6I	CCWGG	4 cut(s)	319, 543, 755, 969
PspFI	CCCAGC	2 cut(s)	352, 539
PspGI	CCWGG	4 cut(s)	319, 543, 755, 969
PspN4I	GGNNCC	9 cut(s)	980, 1159, 1297, 1648, 1696, 1822, 1823, 1854, 1939
PspOMI	GGGCCC	1 cut(s)	1295
PspPI	GGNCC	6 cut(s)	886, 1295, 1296, 1647, 1821, 1845
PspPPI	RGGWCCY	1 cut(s)	1821
PstNI	CAGNNNCTG	1 cut(s)	1931
PsyI	GACNNNGTC	2 cut(s)	137, 1492
PvuII	CAGCTG	3 cut(s)	514, 1058, 2186
RsaI	GTAC	4 cut(s)	749, 779, 878, 1930
RsaNI	GTAC	4 cut(s)	748, 778, 877, 1929
RseI	CAYNNNNRTG	6 cut(s)	584, 743, 987, 1655, 2066, 2302
SalI	GTCGAC	1 cut(s)	1366
SaqAI	TTAA	5 cut(s)	114, 495, 564, 1179, 1592
SatI	GCNGC	8 cut(s)	121, 253, 612, 643, 646, 715, 1566, 1899
Sau96I	GGNCC	6 cut(s)	886, 1295, 1296, 1647, 1821, 1845
SchI	GAGTC	3 cut(s)	83, 526, 1363
ScrFI	CCNGG	5 cut(s)	321, 545, 757, 971, 2548
SduI	GDGCHC	1 cut(s)	1299
SexAI	ACCWGGT	1 cut(s)	969
SfaNI	GCATC	3 cut(s)	1134, 1225, 2294
SfcI	CTRYAG	2 cut(s)	1089, 2523
SfoI	GGCGCC	1 cut(s)	1696
SgrAI	CRCCGGYG	1 cut(s)	1391
SinI	GGWCC	2 cut(s)	1821, 1845
SmiMI	CAYNNNNRTG	6 cut(s)	584, 743, 987, 1655, 2066, 2302
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
SpeI	ACTAGT	1 cut(s)	61
SspDI	GGCGCC	1 cut(s)	1694
SspI	AATATT	1 cut(s)	1006
SspMI	CTAG	7 cut(s)	62, 630, 1017, 1347, 2219, 2496, 2502
StyD4I	CCNGG	5 cut(s)	319, 543, 755, 969, 2546
StyI	CCWWGG	4 cut(s)	616, 1011, 1848, 1865
TaaI	ACNGT	4 cut(s)	139, 237, 1745, 1952
TaiI	ACGT	5 cut(s)	1337, 1496, 1959, 2113, 2139
TaqI	TCGA	9 cut(s)	375, 383, 573, 1225, 1355, 1367, 1581, 1638, 2571
TauI	GCSGC	2 cut(s)	123, 1568
TfiI	GAWTC	9 cut(s)	699, 760, 846, 942, 1101, 1114, 1150, 1466, 2528
Tru1I	TTAA	5 cut(s)	114, 495, 564, 1179, 1592
Tru9I	TTAA	5 cut(s)	114, 495, 564, 1179, 1592
TscAI	CASTG	6 cut(s)	142, 865, 1554, 1748, 1834, 2521
TseFI	GTSAC	5 cut(s)	52, 1330, 1538, 1952, 2188
TseI	GCWGC	6 cut(s)	252, 611, 642, 645, 714, 1898
Tsp45I	GTSAC	5 cut(s)	52, 1330, 1538, 1952, 2188
TspDTI	ATGAA	9 cut(s)	17, 322, 747, 1030, 1674, 1696, 2133, 2262, 2502
TspGWI	ACGGA	1 cut(s)	1727
TspRI	CASTG	6 cut(s)	142, 865, 1554, 1748, 1834, 2521
Tth111I	GACNNNGTC	2 cut(s)	137, 1492
VpaK11BI	GGWCC	2 cut(s)	1821, 1845
XapI	RAATTY	4 cut(s)	293, 305, 485, 2315
XbaI	TCTAGA	2 cut(s)	1346, 2501
XceI	RCATGY	1 cut(s)	748
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1863
XmiI	GTMKAC	3 cut(s)	1367, 1623, 1800
XspI	CTAG	7 cut(s)	62, 630, 1017, 1347, 2219, 2496, 2502
ZraI	GACGTC	3 cut(s)	1335, 1494, 2111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.