Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

3448217 .. 3449670

Gene Structure 1454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0024600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGCGCAAACAAAAGAAAGGAGAATTCGATGCGATTCCTCATCAGCAGCAGAAACGGTGGCCGATGTCGAAGAGCTTCTCACAAAGATCCTTGTGTCGGTGCCACCTCGATCTCTGGTTCGTTTCAAGTGCGTCTCCAAGCACTGGCTCACTCTCATCTCCGACCCCGGATTCTTTCGCCGCCAGACACATCAAAAGTCGAAGATCTCCGGTTTCTTTTCTAGCAAAACCGAAGACGAGTTCTTCAAGTCCATTGCTCTTCGTGACCGTGAAATCCCATCTGGGAATCCCTTCAAAACTATTAATGATTCCTTCGCTGATGGATCCAAGTTGAGGATTCTTCAGTCCTGCAATGGCCTCTTCCTCTGCCATATTCCTATAGTAGACGTGCTTGAAGAAGGAAAACATCATCCCTTGTATGTTGTCAATCCAACAACCAACCAATTCCGGGCTCTTTCTTGTCCAAGCTCTGAGGCCTGGGACCCGTTCATGTTTGTACGTTATGCTTTGGCTTTTAATCCTTCCAAGTCGCCTCATTACAAGGTGATCTGCGTAAATAACTTCCCCTATTGTTATGATAGAGGCCACCACGAAATAGACATATATTCATCTGAGACCGGAGAGTGGAAGCGTCTTGAGGTTCCTTTCTTCCCAAGCCCCTCTGACGTGGGCAGACACCATGATTTCGTGCAGAAGGCCATGCACTTTGACTACAGGAGCAGGAAAGGCGCCGTATACTGCAACGGGGCAGTTCATTGGATAAGAGACAGAAGGGAAGCAATTTTTCCACTCCGCTTTTTTGGGGATGGTAGGTCTGAATTGGTAAGAAACGAAACTGATGTGCTGCACTACTTTGACATAGGCGAAGAACGTTTGGGACTTGTGTCTGCTACCCCTCCTGTCCCCTTGGTTGTCAAAAACATTCCGTTGGATTTTGGTTCATGTCCCACTGAATGGCCGAGATTGGCTCAAAGATATTTTGGGGAGTCCGGTGGCCATTTGTATTTGATTGAGACTTATCAGCATTGTAAGACCCAATTTGATGTGATGGAGATGGAGAGGGACTACTCTGGCTGGTTTGTCAAGTATCATGTTGATCTTAATCCGCTATTCACAGCTCTTCCTGATTCGAATGCTTTTGTCGCCTTGAGCCTCTCTCAAGAGGAGGAAAATGATAATGAGGAGGATTATTCAGCTGATCTTTTGTTACATATGCCAGGTAAGGTCTTAACTTATAGTCTGAGGAATAAGGCCTTCAAAAAATCTGTGGAGTTGGCCAATAAGGAATATTTTCTTGCTTTAGATGATGAATACTTGAGGGATGAGGTTGTTCTCTTTCCTTACATTGAGAGTTTAGCTTGTGTGGGACGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

457

Amino Acids

52.69

Weight (kDa)

6.04

Isoelectric Point (pI)

51.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	24 - 60	1.3e-06	F-box domain
FBA_1	PF07734	109 - 296	1.8e-10	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	100, 728
AccB7I	CCANNNNNTGG	2 cut(s)	144, 954
AccI	GTMKAC	2 cut(s)	384, 735
AciI	CCGC	3 cut(s)	181, 793, 1106
AclI	AACGTT	1 cut(s)	871
AclWI	GGATC	3 cut(s)	82, 318, 331
AcoI	YGGCCR	4 cut(s)	60, 956, 994, 1275
AcsI	RAATTY	1 cut(s)	24
AcuI	CTGAAG	1 cut(s)	326
AcyI	GRCGYC	1 cut(s)	729
AfaI	GTAC	1 cut(s)	498
AfiI	CCNNNNNNNGG	6 cut(s)	97, 144, 333, 448, 624, 954
AgsI	TTSAA	5 cut(s)	127, 247, 295, 395, 1258
AjiI	CACGTC	2 cut(s)	388, 667
AjnI	CCWGG	2 cut(s)	476, 1216
AluBI	AGCT	5 cut(s)	76, 468, 1118, 1196, 1358
AluI	AGCT	5 cut(s)	76, 468, 1118, 1196, 1358
Alw26I	GTCTC	4 cut(s)	139, 608, 759, 1007
AlwI	GGATC	3 cut(s)	82, 318, 331
AoxI	GGCC	9 cut(s)	60, 355, 474, 583, 696, 956, 994, 1251, 1275
ApeKI	GCWGC	2 cut(s)	47, 844
ApoI	RAATTY	1 cut(s)	24
AseI	ATTAAT	1 cut(s)	303
Asp700I	GAANNNNTTC	3 cut(s)	75, 290, 1290
AspLEI	GCGC	2 cut(s)	7, 731
AspS9I	GGNCC	1 cut(s)	481
AsuC2I	CCSGG	2 cut(s)	168, 449
AsuHPI	GGTGA	1 cut(s)	556
AsuII	TTCGAA	1 cut(s)	1130
AvaII	GGWCC	1 cut(s)	481
BalI	TGGCCA	2 cut(s)	996, 1277
BamHI	GGATCC	1 cut(s)	323
BanI	GGYRCC	2 cut(s)	100, 728
BanII	GRGCYC	1 cut(s)	454
BbsI	GAAGAC	1 cut(s)	240
BbvI	GCAGC	2 cut(s)	59, 831
BccI	CCATC	5 cut(s)	286, 314, 800, 1042, 1048
BceAI	ACGGC	1 cut(s)	716
BciT130I	CCWGG	2 cut(s)	478, 1218
BcnI	CCSGG	2 cut(s)	168, 449
BcoDI	GTCTC	4 cut(s)	139, 608, 759, 1007
BfaI	CTAG	1 cut(s)	222
BfmI	CTRYAG	2 cut(s)	378, 712
BfoI	RGCGCY	1 cut(s)	732
BglII	AGATCT	1 cut(s)	204
BisI	GCNGC	3 cut(s)	48, 181, 845
BlsI	GCNGC	3 cut(s)	49, 182, 846
Bme1390I	CCNGG	4 cut(s)	168, 449, 478, 1218
Bme18I	GGWCC	1 cut(s)	481
BmgBI	CACGTC	2 cut(s)	388, 667
BmgT120I	GGNCC	1 cut(s)	481
BmiI	GGNNCC	6 cut(s)	102, 325, 482, 483, 642, 730
BmrFI	CCNGG	4 cut(s)	168, 449, 478, 1218
BmsI	GCATC	1 cut(s)	20
BoxI	GACNNNNGTC	1 cut(s)	883
BpiI	GAAGAC	1 cut(s)	240
BplI	GAGNNNNNCTC	4 cut(s)	952, 984, 1141, 1173
Bpu14I	TTCGAA	1 cut(s)	1130
BpuEI	CTTGAG	4 cut(s)	656, 1143, 1168, 1336
BpuMI	CCSGG	2 cut(s)	168, 449
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaHI	GRCGYC	1 cut(s)	729
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	3 cut(s)	166, 477, 906
BsaWI	WCCGGW	3 cut(s)	209, 617, 989
Bsc4I	CCNNNNNNNGG	6 cut(s)	97, 144, 333, 448, 624, 954
Bse1I	ACTGG	1 cut(s)	149
Bse3DI	GCAATG	2 cut(s)	252, 358
Bse8I	GATNNNNATC	1 cut(s)	1101
BseBI	CCWGG	2 cut(s)	478, 1218
BseDI	CCNNGG	3 cut(s)	166, 477, 906
BseGI	GGATG	3 cut(s)	409, 811, 1327
BseJI	GATNNNNATC	1 cut(s)	1101
BseLI	CCNNNNNNNGG	6 cut(s)	97, 144, 333, 448, 624, 954
BseMI	GCAATG	2 cut(s)	252, 358
BseMII	CTCAG	3 cut(s)	462, 603, 1232
BseNI	ACTGG	1 cut(s)	149
BseRI	GAGGAG	2 cut(s)	1178, 1196
BseXI	GCAGC	2 cut(s)	59, 831
BsgI	GTGCAG	2 cut(s)	710, 830
BshFI	GGCC	9 cut(s)	62, 357, 476, 585, 698, 958, 996, 1253, 1277
BshNI	GGYRCC	2 cut(s)	100, 728
BsiSI	CCGG	5 cut(s)	168, 210, 448, 618, 990
BslFI	GGGAC	5 cut(s)	494, 887, 891, 930, 1076
BslI	CCNNNNNNNGG	6 cut(s)	97, 144, 333, 448, 624, 954
BsmAI	GTCTC	4 cut(s)	139, 608, 759, 1007
BsmBI	CGTCTC	1 cut(s)	139
BsmFI	GGGAC	5 cut(s)	494, 887, 891, 930, 1076
BsmI	GAATGC	1 cut(s)	1138
BsnI	GGCC	9 cut(s)	62, 357, 476, 585, 698, 958, 996, 1253, 1277
Bso31I	GGTCTC	1 cut(s)	608
Bsp119I	TTCGAA	1 cut(s)	1130
Bsp1286I	GDGCHC	1 cut(s)	454
Bsp143I	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
BspACI	CCGC	3 cut(s)	181, 793, 1106
BspANI	GGCC	9 cut(s)	62, 357, 476, 585, 698, 958, 996, 1253, 1277
BspCNI	CTCAG	3 cut(s)	463, 604, 1233
BspLI	GGNNCC	6 cut(s)	102, 325, 482, 483, 642, 730
BspPI	GGATC	3 cut(s)	82, 318, 331
BspQI	GCTCTTC	3 cut(s)	66, 264, 1125
BspT104I	TTCGAA	1 cut(s)	1130
BspT107I	GGYRCC	2 cut(s)	100, 728
BspTNI	GGTCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	252, 358
BsrI	ACTGG	1 cut(s)	149
BssECI	CCNNGG	3 cut(s)	166, 477, 906
BssMI	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
BssNAI	GTATAC	1 cut(s)	736
BssNI	GRCGYC	1 cut(s)	729
BssT1I	CCWWGG	1 cut(s)	906
Bst1107I	GTATAC	1 cut(s)	736
Bst2UI	CCWGG	2 cut(s)	478, 1218
Bst4CI	ACNGT	2 cut(s)	58, 269
Bst6I	CTCTTC	4 cut(s)	66, 264, 365, 1125
BstACI	GRCGYC	1 cut(s)	729
BstBI	TTCGAA	1 cut(s)	1130
BstDEI	CTNAG	3 cut(s)	471, 612, 1241
BstF5I	GGATG	3 cut(s)	409, 811, 1327
BstH2I	RGCGCY	1 cut(s)	732
BstHHI	GCGC	2 cut(s)	7, 731
BstKTI	GATC	7 cut(s)	90, 113, 207, 326, 549, 1099, 1201
BstMAI	GTCTC	4 cut(s)	139, 608, 759, 1007
BstMBI	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
BstMWI	GCNNNNNNNGC	2 cut(s)	726, 1142
BstNI	CCWGG	2 cut(s)	478, 1218
BstPAI	GACNNNNGTC	1 cut(s)	883
BstSCI	CCNGG	4 cut(s)	166, 447, 476, 1216
BstSFI	CTRYAG	2 cut(s)	378, 712
BstV1I	GCAGC	2 cut(s)	59, 831
BstV2I	GAAGAC	1 cut(s)	240
BstX2I	RGATCY	3 cut(s)	87, 204, 323
BstYI	RGATCY	3 cut(s)	87, 204, 323
BstZ17I	GTATAC	1 cut(s)	736
BsuRI	GGCC	9 cut(s)	62, 357, 476, 585, 698, 958, 996, 1253, 1277
BtrI	CACGTC	2 cut(s)	388, 667
BtsCI	GGATG	3 cut(s)	409, 811, 1327
BtsIMutI	CAGTG	2 cut(s)	142, 948
CfoI	GCGC	2 cut(s)	7, 731
Cfr13I	GGNCC	1 cut(s)	481
CseI	GACGC	2 cut(s)	121, 620
Csp6I	GTAC	1 cut(s)	497
CviAII	CATG	5 cut(s)	490, 680, 700, 942, 1091
CviQI	GTAC	1 cut(s)	497
DdeI	CTNAG	3 cut(s)	471, 612, 1241
DinI	GGCGCC	1 cut(s)	730
DpnI	GATC	7 cut(s)	89, 112, 206, 325, 548, 1098, 1200
DpnII	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
EaeI	YGGCCR	4 cut(s)	60, 956, 994, 1275
Eam1104I	CTCTTC	4 cut(s)	66, 264, 365, 1125
EarI	CTCTTC	4 cut(s)	66, 264, 365, 1125
Eco130I	CCWWGG	1 cut(s)	906
Eco147I	AGGCCT	2 cut(s)	476, 1253
Eco24I	GRGCYC	1 cut(s)	454
Eco31I	GGTCTC	1 cut(s)	608
Eco47I	GGWCC	1 cut(s)	481
Eco57I	CTGAAG	1 cut(s)	326
EcoO109I	RGGNCCY	1 cut(s)	481
EcoRI	GAATTC	1 cut(s)	24
EcoRII	CCWGG	2 cut(s)	476, 1216
EcoT14I	CCWWGG	1 cut(s)	906
EcoT38I	GRGCYC	1 cut(s)	454
EgeI	GGCGCC	1 cut(s)	730
EheI	GGCGCC	1 cut(s)	730
ErhI	CCWWGG	1 cut(s)	906
Esp3I	CGTCTC	1 cut(s)	139
FaeI	CATG	5 cut(s)	493, 683, 703, 945, 1094
FaqI	GGGAC	5 cut(s)	494, 887, 891, 930, 1076
FatI	CATG	5 cut(s)	489, 679, 699, 941, 1090
FauNDI	CATATG	1 cut(s)	1212
FblI	GTMKAC	2 cut(s)	384, 735
Fnu4HI	GCNGC	3 cut(s)	48, 181, 845
FokI	GGATG	3 cut(s)	396, 818, 1334
FriOI	GRGCYC	1 cut(s)	454
Fsp4HI	GCNGC	3 cut(s)	48, 181, 845
FspBI	CTAG	1 cut(s)	222
GlaI	GCGC	2 cut(s)	6, 730
GluI	GCNGC	3 cut(s)	48, 181, 845
HaeII	RGCGCY	1 cut(s)	732
HaeIII	GGCC	9 cut(s)	62, 357, 476, 585, 698, 958, 996, 1253, 1277
HapII	CCGG	5 cut(s)	168, 210, 448, 618, 990
HgaI	GACGC	2 cut(s)	121, 620
HhaI	GCGC	2 cut(s)	7, 731
Hin1I	GRCGYC	1 cut(s)	729
Hin1II	CATG	5 cut(s)	493, 683, 703, 945, 1094
Hin6I	GCGC	2 cut(s)	5, 729
HinP1I	GCGC	2 cut(s)	5, 729
HinfI	GANTC	7 cut(s)	35, 171, 286, 308, 337, 986, 1127
HpaII	CCGG	5 cut(s)	168, 210, 448, 618, 990
HphI	GGTGA	1 cut(s)	556
Hpy166II	GTNNAC	2 cut(s)	385, 736
Hpy188I	TCNGA	6 cut(s)	163, 472, 613, 664, 817, 1242
Hpy188III	TCNNGA	4 cut(s)	263, 635, 1124, 1160
Hpy8I	GTNNAC	2 cut(s)	385, 736
HpyAV	CCTTC	7 cut(s)	301, 322, 392, 531, 688, 765, 1264
HpyCH4III	ACNGT	2 cut(s)	58, 269
HpyCH4IV	ACGT	4 cut(s)	387, 499, 666, 871
HpyCH4V	TGCA	5 cut(s)	351, 691, 703, 741, 847
HpyF10VI	GCNNNNNNNGC	2 cut(s)	726, 1142
HpyF3I	CTNAG	3 cut(s)	471, 612, 1241
HpySE526I	ACGT	4 cut(s)	387, 499, 666, 871
Hsp92I	GRCGYC	1 cut(s)	729
Hsp92II	CATG	5 cut(s)	493, 683, 703, 945, 1094
HspAI	GCGC	2 cut(s)	5, 729
KasI	GGCGCC	1 cut(s)	728
KflI	GGGWCCC	1 cut(s)	481
Kzo9I	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
LguI	GCTCTTC	3 cut(s)	66, 264, 1125
LmnI	GCTCC	1 cut(s)	717
Lsp1109I	GCAGC	2 cut(s)	59, 831
LweI	GCATC	1 cut(s)	20
MaeI	CTAG	1 cut(s)	222
MaeII	ACGT	4 cut(s)	387, 499, 666, 871
MaeIII	GTNAC	2 cut(s)	263, 1206
MalI	GATC	7 cut(s)	89, 112, 206, 325, 548, 1098, 1200
MboI	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
MflI	RGATCY	3 cut(s)	87, 204, 323
MhlI	GDGCHC	1 cut(s)	454
MlsI	TGGCCA	2 cut(s)	996, 1277
MluCI	AATT	5 cut(s)	24, 443, 780, 818, 1037
MluNI	TGGCCA	2 cut(s)	996, 1277
Mly113I	GGCGCC	1 cut(s)	729
MlyI	GAGTC	1 cut(s)	995
MmeI	TCCRAC	3 cut(s)	186, 455, 909
Mox20I	TGGCCA	2 cut(s)	996, 1277
MroXI	GAANNNNTTC	3 cut(s)	75, 290, 1290
MscI	TGGCCA	2 cut(s)	996, 1277
MseI	TTAA	4 cut(s)	303, 516, 1101, 1229
Msp20I	TGGCCA	2 cut(s)	996, 1277
MspA1I	CMGCKG	1 cut(s)	1196
MspI	CCGG	5 cut(s)	168, 210, 448, 618, 990
MspR9I	CCNGG	4 cut(s)	168, 449, 478, 1218
Mva1269I	GAATGC	1 cut(s)	1138
MvaI	CCWGG	2 cut(s)	478, 1218
MwoI	GCNNNNNNNGC	2 cut(s)	726, 1142
NarI	GGCGCC	1 cut(s)	729
NciI	CCSGG	2 cut(s)	168, 449
NdeI	CATATG	1 cut(s)	1212
NdeII	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
NlaIII	CATG	5 cut(s)	493, 683, 703, 945, 1094
NlaIV	GGNNCC	6 cut(s)	102, 325, 482, 483, 642, 730
NmeAIII	GCCGAG	1 cut(s)	984
NmuCI	GTSAC	1 cut(s)	263
NspV	TTCGAA	1 cut(s)	1130
PceI	AGGCCT	2 cut(s)	476, 1253
PciSI	GCTCTTC	3 cut(s)	66, 264, 1125
PctI	GAATGC	1 cut(s)	1138
PdmI	GAANNNNTTC	3 cut(s)	75, 290, 1290
PfeI	GAWTC	6 cut(s)	35, 171, 286, 308, 337, 1127
PflMI	CCANNNNNTGG	2 cut(s)	144, 954
PkrI	GCNGC	3 cut(s)	49, 182, 846
PleI	GAGTC	1 cut(s)	994
PluTI	GGCGCC	1 cut(s)	732
PpsI	GAGTC	1 cut(s)	994
PpuMI	RGGWCCY	1 cut(s)	481
PshAI	GACNNNNGTC	1 cut(s)	883
PshBI	ATTAAT	1 cut(s)	303
Psp1406I	AACGTT	1 cut(s)	871
Psp5II	RGGWCCY	1 cut(s)	481
Psp6I	CCWGG	2 cut(s)	476, 1216
PspGI	CCWGG	2 cut(s)	476, 1216
PspN4I	GGNNCC	6 cut(s)	102, 325, 482, 483, 642, 730
PspPI	GGNCC	1 cut(s)	481
PspPPI	RGGWCCY	1 cut(s)	481
PsuI	RGATCY	3 cut(s)	87, 204, 323
PvuII	CAGCTG	1 cut(s)	1196
RsaI	GTAC	1 cut(s)	498
RsaNI	GTAC	1 cut(s)	497
SapI	GCTCTTC	3 cut(s)	66, 264, 1125
SaqAI	TTAA	4 cut(s)	303, 516, 1101, 1229
SatI	GCNGC	3 cut(s)	48, 181, 845
Sau3AI	GATC	7 cut(s)	87, 110, 204, 323, 546, 1096, 1198
Sau96I	GGNCC	1 cut(s)	481
SchI	GAGTC	1 cut(s)	995
ScrFI	CCNGG	4 cut(s)	168, 449, 478, 1218
SduI	GDGCHC	1 cut(s)	454
SfaNI	GCATC	1 cut(s)	20
SfcI	CTRYAG	2 cut(s)	378, 712
SfoI	GGCGCC	1 cut(s)	730
SfuI	TTCGAA	1 cut(s)	1130
SinI	GGWCC	1 cut(s)	481
SmlI	CTYRAG	4 cut(s)	635, 1147, 1158, 1315
SmoI	CTYRAG	4 cut(s)	635, 1147, 1158, 1315
Sse9I	AATT	5 cut(s)	24, 443, 780, 818, 1037
SseBI	AGGCCT	2 cut(s)	476, 1253
SsiI	CCGC	3 cut(s)	181, 793, 1106
SspDI	GGCGCC	1 cut(s)	728
SspI	AATATT	1 cut(s)	1289
SspMI	CTAG	1 cut(s)	222
StuI	AGGCCT	2 cut(s)	476, 1253
StyD4I	CCNGG	4 cut(s)	166, 447, 476, 1216
StyI	CCWWGG	1 cut(s)	906
TaaI	ACNGT	2 cut(s)	58, 269
TaiI	ACGT	4 cut(s)	390, 502, 669, 874
TaqI	TCGA	5 cut(s)	28, 69, 109, 200, 1130
TasI	AATT	5 cut(s)	24, 443, 780, 818, 1037
TauI	GCSGC	1 cut(s)	183
TfiI	GAWTC	6 cut(s)	35, 171, 286, 308, 337, 1127
Tru1I	TTAA	4 cut(s)	303, 516, 1101, 1229
Tru9I	TTAA	4 cut(s)	303, 516, 1101, 1229
TscAI	CASTG	2 cut(s)	149, 955
TseFI	GTSAC	1 cut(s)	263
TseI	GCWGC	2 cut(s)	47, 844
Tsp45I	GTSAC	1 cut(s)	263
TspDTI	ATGAA	5 cut(s)	478, 597, 743, 930, 1323
TspGWI	ACGGA	1 cut(s)	915
TspRI	CASTG	2 cut(s)	149, 955
Van91I	CCANNNNNTGG	2 cut(s)	144, 954
VpaK11BI	GGWCC	1 cut(s)	481
VspI	ATTAAT	1 cut(s)	303
XapI	RAATTY	1 cut(s)	24
XmiI	GTMKAC	2 cut(s)	384, 735
XmnI	GAANNNNTTC	3 cut(s)	75, 290, 1290
XspI	CTAG	1 cut(s)	222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.