RLG00000023384

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
22896273 .. 22898774
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023384

Sequence Viewer

Length: 2502 bp
ATGAAGCCAGTTCTCATCCCTCTCTACCTTTCTGTGTTTCAGTACATCATCGTCCAACTGCTGGCCGGTCAGTCGCCACCTATATACACTCCTACTGATAATATCACCCTTAACTGTGGCTCATCCGGTGACAATGTCAGTGACTATGATTCTCGAAATTGGAGTGGAGATATCAACTCAAAGCTTTCCCCTATAGAAGTTGGTCGCGCATCCAAAGCTTTGAAAGCACTACCATCGTCCTCCTCGAGAGGTACCGTACGCCACAGCCAAGTACCGTACACCACAGCAAGGCTTTCTTACTCGGAATTCACTTATCCATTTCCCGTCAGTCCGGGCCAGAAGTTCATTCGCTTATACTTCTACCCAGCTTCATACAGCGCCGAGTTCTCCCTCTCCGAGTCTCTTTTCTCTGTCAAAGTCGGTGCCTTCACTCTTCTCAAAGACTTTAACGCTTCTGCAAATGCCGATGCTGATCAATCTGAGACGGTGCTCAAAGAATTTTGTACTAACGTTGAGCGAGAGCAACAGATCCTTAACATCACATTCACTCCCAGCAAAGAGGCATATGCTTTCATCAACGGGATTGAAATATGGTCGATGCCAACAAATCTTTATTACTCTACTGCTAACTCTCTCAGCAGCAGAAACTCATATCCAGTCAAAAACAGCACAGCTCTAGAGATGCTATACCGAATCAACGTTGGCGGAAGCATAGTTTCGCCCAAGGAAGACACCGGCTTGTACCGGACTTGGGATGCCACAGACCTCCTTTATTTGGATGGTCAAAGTACAAGACTCAGTGTTCTTCAACAGAACAGGACTGTTGAACTCAAATTTATCAAAATACCAGAGTACATAGCCCCAAAAGTAGTTTACCAAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACGAGAATTACAACCTCACCTGGTTATTTCCGGTACGCTCTAACTTCTCCTACCTGATTAGATTGCATTTTTGTGAGTTTGAGTCTGAAATTACCAAGAGCGGAAACCGGACGTTTATAATTTACATAGCCAATCAAACTGCTGAACAAGGAGCAGACATAATTCAATGGAGTGGTGGAAATGGGATACCGATATACAGAGACTACACCTTGCTCATGTCTGACCCTGGAAGCCAGAAGAGAGTTAACCTCTCTATTGCGTTGCAAGTATCCCCACTAGATCGGTTGAGTACATATACCGATGCAATGATGAATGGGATCGAAATCTTCAAATTATTCAACCCAGATGGCAATAATGTCCCTCTGAAACGGCAAACTTCACACTACAAGCGGACAACACAAGTACAAATCATCATTGCTGCTGTTGTGTCTAGCATACTTGTGTTTTTCGTCCTCGGATTTTTGGTCATCAAGCGACGATGGAAAGCTAAGGACACTGACTCCAGCCACAGGATAACGAGGTCAACCATGATCCCAGAGTCACCTTTACCATCTTATTTGTGTCGTTACTTTTCACTGGCAGAGATCAAGGCTACCACCAAAAACTTCAATGATACTTTCATTATTGGAGCTGGAGGATTTGGCAACGTGTACAAAGGATGTATCGAAGGTGGAGTCACTCCAGTTGCAATCAAAAGACTGAAACCAGAGTCGTCCCAGGGTGCCCACGAGTTTAAGACGGAAATCGAGATGCTCTCTCAACTCCGTCATCGTCATTTGGTTTCGCTCATTGGATATTGTGCTGATAAAGGTGAGATGATCTTAGTGTACGAGTATATGTCCCGTGGAACTCTTCGTGACCATCTCTACCACAATAATAAACCACCTCTTTCTTGGAAGCAACGGCTTCAGATTTGTATTGGCACAGCCCGCGGGTTGCAATACCTCCACAGTGGTGCGAACGGCACCATCATACACCGTGATGTGAAGAGCACAAACATCTTATTGGATGACAAATGGGTAGCCAAAGTTTCAGATTTTGGGTTGTCCAAGGGCACGACTAACATGTCCAAAACCCACATCAGCACGGTGGTGAAAGGTAGTTTTGGGTATCTGGACCCGGAGTACTACCGCCGACAACGTCTGACTGAGAAGTCAGACGTGTACTCACTTGGTGTAGTGTTGTTTGAGGTATTGTGTGCAAGGCCAGCAGTGATGCAGGCAGAAGAGCTGAAGCAGGTGAGCCTGGCTGAGTGGGCCAAGAGCTGTCATCAGAATGGAGAAATTGATCAAATCATTGATCCAAGTTTAAGAGGTAAGATCGCAGCCGAGTGCCTGAATAAGTTCACCGAGATAGGTATCAGTTGCATGCATGACAATGGAACAGAACGGCCGTCCATGACTGATGTTGTTAGGGAGCTTGAACTTGCATTGCAGCTTCAGCAGTGTGCAGAAGAGAATAACAACTGCACTGAAGGGATTGTTGAAACTGAACCAAGCAGTAATGAGCAAAGATGTGCCACCAACGATTCCATTAAATGTATATCAGCAACTATCTTCTCTGAGGTTAACAACCCAAGTGGGAGATGA

Protein Analysis

834

Amino Acids

93.44

Weight (kDa)

8.3

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 37 - 415 1.9e-29 Malectin-like domain
Malectin PF11721 271 - 373 1.8e-07 Malectin domain
Pkinase PF00069 512 - 776 2.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 513 - 778 3.6e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1031
AarI CACCTGC 1 cut(s) 2140
AasI GACNNNNNNGTC 2 cut(s) 1978, 2065
Acc36I ACCTGC 1 cut(s) 2140
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 4 cut(s) 251, 422, 1634, 1877
AccB7I CCANNNNNTGG 1 cut(s) 61
AccBSI CCGCTC 1 cut(s) 1014
AccII CGCG 2 cut(s) 207, 1845
AciI CCGC 6 cut(s) 705, 1014, 1303, 1843, 1845, 2044
AclI AACGTT 2 cut(s) 510, 699
AclWI GGATC 4 cut(s) 523, 1238, 1438, 2207
AcoI YGGCCR 2 cut(s) 63, 2303
AcsI RAATTY 3 cut(s) 305, 497, 833
AcuI CTGAAG 4 cut(s) 1805, 2165, 2336, 2406
AdeI CACNNNGTG 1 cut(s) 2087
AfiI CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1422
AflIII ACRYGT 3 cut(s) 1560, 1977, 2073
AjiI CACGTC 1 cut(s) 2074
AjnI CCWGG 4 cut(s) 932, 1138, 1629, 2157
AleI CACNNNNGTG 2 cut(s) 1866, 2003
Alw21I GWGCWC 2 cut(s) 492, 1907
Alw26I GTCTC 3 cut(s) 405, 476, 1107
AlwI GGATC 4 cut(s) 523, 1238, 1438, 2207
Ama87I CYCGRG 1 cut(s) 244
AoxI GGCC 5 cut(s) 63, 334, 2117, 2169, 2303
ApeKI GCWGC 4 cut(s) 639, 1331, 2237, 2347
ApoI RAATTY 3 cut(s) 305, 497, 833
ArsI GACNNNNNNTTYG 2 cut(s) 1572, 1604
Asp700I GAANNNNTTC 1 cut(s) 2255
Asp718I GGTACC 1 cut(s) 251
AspLEI GCGC 2 cut(s) 209, 380
AspS9I GGNCC 3 cut(s) 334, 2029, 2169
AsuC2I CCSGG 2 cut(s) 333, 2033
AsuHPI GGTGA 8 cut(s) 97, 140, 922, 1446, 1736, 2017, 2164, 2251
AvaI CYCGRG 1 cut(s) 244
AvaII GGWCC 1 cut(s) 2029
BaeGI GKGCMC 2 cut(s) 1639, 1970
BanI GGYRCC 4 cut(s) 251, 422, 1634, 1877
BauI CACGAG 1 cut(s) 1640
BbsI GAAGAC 1 cut(s) 735
Bbv12I GWGCWC 2 cut(s) 492, 1907
BbvI GCAGC 4 cut(s) 651, 1318, 2249, 2359
BccI CCATC 8 cut(s) 241, 773, 917, 1253, 1386, 1471, 1782, 1889
BceAI ACGGC 5 cut(s) 1298, 1832, 1891, 2290, 2318
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BciT130I CCWGG 4 cut(s) 934, 1140, 1631, 2159
BciVI GTATCC 2 cut(s) 1092, 1192
BclI TGATCA 2 cut(s) 472, 2200
BcnI CCSGG 2 cut(s) 333, 2033
BcoDI GTCTC 3 cut(s) 405, 476, 1107
BfaI CTAG 3 cut(s) 677, 1190, 1344
BfmI CTRYAG 1 cut(s) 192
BfoI RGCGCY 1 cut(s) 381
BfuAI ACCTGC 1 cut(s) 2140
BfuI GTATCC 2 cut(s) 1092, 1192
BisI GCNGC 4 cut(s) 640, 1332, 2238, 2348
BlsI GCNGC 4 cut(s) 641, 1333, 2239, 2349
BmcAI AGTACT 1 cut(s) 2039
Bme1390I CCNGG 6 cut(s) 333, 934, 1140, 1631, 2033, 2159
Bme18I GGWCC 1 cut(s) 2029
BmeT110I CYCGRG 1 cut(s) 244
BmgBI CACGTC 1 cut(s) 2074
BmgT120I GGNCC 3 cut(s) 334, 2029, 2169
BmiI GGNNCC 5 cut(s) 253, 424, 1636, 1879, 2031
BmrFI CCNGG 6 cut(s) 333, 934, 1140, 1631, 2033, 2159
BmsI GCATC 8 cut(s) 218, 457, 588, 672, 745, 1204, 1653, 2118
BpiI GAAGAC 1 cut(s) 735
BplI GAGNNNNNCTC 4 cut(s) 1146, 1178, 1652, 1684
BpmI CTGGAG 3 cut(s) 1399, 1566, 1578
Bpu10I CCTNAGC 1 cut(s) 1401
BpuMI CCSGG 2 cut(s) 333, 2033
BsaBI GATNNNNATC 3 cut(s) 471, 1235, 2270
BsaJI CCNNGG 8 cut(s) 723, 1138, 1366, 1629, 1630, 1756, 1843, 1962
BsaWI WCCGGW 4 cut(s) 125, 744, 943, 1020
BsaXI ACNNNNNCTCC 4 cut(s) 532, 562, 1397, 1427
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1422
Bse118I RCCGGY 2 cut(s) 65, 734
Bse1I ACTGG 4 cut(s) 8, 656, 1494, 1595
Bse3DI GCAATG 3 cut(s) 1224, 1326, 2342
Bse8I GATNNNNATC 3 cut(s) 471, 1235, 2270
BseBI CCWGG 4 cut(s) 934, 1140, 1631, 2159
BseDI CCNNGG 8 cut(s) 723, 1138, 1366, 1629, 1630, 1756, 1843, 1962
BseGI GGATG 8 cut(s) 15, 122, 209, 760, 784, 903, 1577, 1927
BseJI GATNNNNATC 3 cut(s) 471, 1235, 2270
BseLI CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1422
BseMI GCAATG 3 cut(s) 1224, 1326, 2342
BseMII CTCAG 6 cut(s) 471, 649, 811, 2052, 2154, 2466
BseNI ACTGG 4 cut(s) 8, 656, 1494, 1595
BseRI GAGGAG 1 cut(s) 232
BseSI GKGCMC 2 cut(s) 1639, 1970
BseX3I CGGCCG 1 cut(s) 2303
BseXI GCAGC 4 cut(s) 651, 1318, 2249, 2359
BseYI CCCAGC 2 cut(s) 364, 551
BsgI GTGCAG 2 cut(s) 2365, 2382
Bsh1236I CGCG 2 cut(s) 207, 1845
Bsh1285I CGRYCG 1 cut(s) 2306
BshFI GGCC 5 cut(s) 65, 336, 2119, 2171, 2305
BshNI GGYRCC 4 cut(s) 251, 422, 1634, 1877
BsiEI CGRYCG 1 cut(s) 2306
BsiHKAI GWGCWC 2 cut(s) 492, 1907
BsiHKCI CYCGRG 1 cut(s) 244
BsiSI CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2033
BsiWI CGTACG 1 cut(s) 256
BslFI GGGAC 3 cut(s) 1256, 1612, 1738
BslI CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1422
BsmAI GTCTC 3 cut(s) 405, 476, 1107
BsmBI CGTCTC 1 cut(s) 476
BsmFI GGGAC 3 cut(s) 1256, 1612, 1738
BsnI GGCC 5 cut(s) 65, 336, 2119, 2171, 2305
BsoBI CYCGRG 1 cut(s) 244
Bsp1286I GDGCHC 4 cut(s) 492, 1639, 1907, 1970
Bsp1407I TGTACA 1 cut(s) 1563
BspACI CCGC 6 cut(s) 705, 1014, 1303, 1843, 1845, 2044
BspANI GGCC 5 cut(s) 65, 336, 2119, 2171, 2305
BspCNI CTCAG 6 cut(s) 472, 648, 810, 2053, 2155, 2467
BspFNI CGCG 2 cut(s) 207, 1845
BspLI GGNNCC 5 cut(s) 253, 424, 1636, 1879, 2031
BspMI ACCTGC 1 cut(s) 2140
BspPI GGATC 4 cut(s) 523, 1238, 1438, 2207
BspQI GCTCTTC 2 cut(s) 1895, 2133
BspT107I GGYRCC 4 cut(s) 251, 422, 1634, 1877
BsrBI CCGCTC 1 cut(s) 1014
BsrDI GCAATG 3 cut(s) 1224, 1326, 2342
BsrFI RCCGGY 2 cut(s) 65, 734
BsrGI TGTACA 1 cut(s) 1563
BsrI ACTGG 4 cut(s) 8, 656, 1494, 1595
BssAI RCCGGY 2 cut(s) 65, 734
BssECI CCNNGG 8 cut(s) 723, 1138, 1366, 1629, 1630, 1756, 1843, 1962
BssSI CACGAG 1 cut(s) 1640
BssT1I CCWWGG 2 cut(s) 723, 1962
Bst2BI CACGAG 1 cut(s) 1640
Bst2UI CCWGG 4 cut(s) 934, 1140, 1631, 2159
Bst4CI ACNGT 8 cut(s) 116, 256, 276, 487, 823, 1865, 1892, 2002
Bst6I CTCTTC 6 cut(s) 438, 1145, 1770, 1895, 2133, 2361
BstAUI TGTACA 1 cut(s) 1563
BstC8I GCNNGC 5 cut(s) 63, 1843, 2121, 2133, 2282
BstDEI CTNAG 8 cut(s) 480, 635, 797, 1401, 1735, 2061, 2163, 2475
BstDSI CCRYGG 2 cut(s) 1756, 1843
BstF5I GGATG 8 cut(s) 15, 122, 209, 760, 784, 903, 1577, 1927
BstFNI CGCG 2 cut(s) 207, 1845
BstH2I RGCGCY 1 cut(s) 381
BstHHI GCGC 2 cut(s) 209, 380
BstMAI GTCTC 3 cut(s) 405, 476, 1107
BstMCI CGRYCG 1 cut(s) 2306
BstMWI GCNNNNNNNGC 6 cut(s) 215, 224, 1842, 2120, 2168, 2353
BstNI CCWGG 4 cut(s) 934, 1140, 1631, 2159
BstNSI RCATGY 2 cut(s) 1981, 2284
BstSCI CCNGG 6 cut(s) 331, 932, 1138, 1629, 2031, 2157
BstSFI CTRYAG 1 cut(s) 192
BstSLI GKGCMC 2 cut(s) 1639, 1970
BstUI CGCG 2 cut(s) 207, 1845
BstV1I GCAGC 4 cut(s) 651, 1318, 2249, 2359
BstV2I GAAGAC 1 cut(s) 735
BstX2I RGATCY 1 cut(s) 528
BstYI RGATCY 1 cut(s) 528
BstZI CGGCCG 1 cut(s) 2303
BsuI GTATCC 2 cut(s) 1092, 1192
BsuRI GGCC 5 cut(s) 65, 336, 2119, 2171, 2305
BtgI CCRYGG 2 cut(s) 1756, 1843
BtrI CACGTC 1 cut(s) 2074
BtsCI GGATG 8 cut(s) 15, 122, 209, 760, 784, 903, 1577, 1927
BtsI GCAGTG 2 cut(s) 2130, 2363
BtsIMutI CAGTG 8 cut(s) 145, 805, 1407, 1487, 1870, 2130, 2363, 2382
BveI ACCTGC 1 cut(s) 2140
Cac8I GCNNGC 5 cut(s) 63, 1843, 2121, 2133, 2282
CfoI GCGC 2 cut(s) 209, 380
Cfr10I RCCGGY 2 cut(s) 65, 734
Cfr13I GGNCC 3 cut(s) 334, 2029, 2169
Cfr42I CCGCGG 1 cut(s) 1846
CsiI ACCWGGT 1 cut(s) 932
CspCI CAANNNNNGTGG 1 cut(s) 2473
CviAII CATG 6 cut(s) 1129, 1441, 1978, 2281, 2285, 2311
DdeI CTNAG 8 cut(s) 480, 635, 797, 1401, 1735, 2061, 2163, 2475
DraIII CACNNNGTG 1 cut(s) 2087
DrdI GACNNNNNNGTC 2 cut(s) 1978, 2065
DseDI GACNNNNNNGTC 2 cut(s) 1978, 2065
EaeI YGGCCR 2 cut(s) 63, 2303
EagI CGGCCG 1 cut(s) 2303
Eam1104I CTCTTC 6 cut(s) 438, 1145, 1770, 1895, 2133, 2361
EarI CTCTTC 6 cut(s) 438, 1145, 1770, 1895, 2133, 2361
EciI GGCGGA 1 cut(s) 720
EclXI CGGCCG 1 cut(s) 2303
Eco130I CCWWGG 2 cut(s) 723, 1962
Eco32I GATATC 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 2029
Eco52I CGGCCG 1 cut(s) 2303
Eco57I CTGAAG 4 cut(s) 1805, 2165, 2336, 2406
Eco88I CYCGRG 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 4 cut(s) 932, 1138, 1629, 2157
EcoRV GATATC 1 cut(s) 172
EcoT14I CCWWGG 2 cut(s) 723, 1962
EcoT22I ATGCAT 1 cut(s) 2286
ErhI CCWWGG 2 cut(s) 723, 1962
Esp3I CGTCTC 1 cut(s) 476
FaeI CATG 6 cut(s) 1132, 1444, 1981, 2284, 2288, 2314
FalI AAGNNNNNCTT 2 cut(s) 280, 312
FaqI GGGAC 3 cut(s) 1256, 1612, 1738
FatI CATG 6 cut(s) 1128, 1440, 1977, 2280, 2284, 2310
FauI CCCGC 2 cut(s) 1838, 1850
FauNDI CATATG 1 cut(s) 565
FbaI TGATCA 2 cut(s) 472, 2200
Fnu4HI GCNGC 4 cut(s) 640, 1332, 2238, 2348
FokI GGATG 8 cut(s) 2, 109, 196, 767, 791, 910, 1584, 1934
Fsp4HI GCNGC 4 cut(s) 640, 1332, 2238, 2348
FspBI CTAG 3 cut(s) 677, 1190, 1344
GlaI GCGC 2 cut(s) 208, 379
GluI GCNGC 4 cut(s) 640, 1332, 2238, 2348
GsaI CCCAGC 2 cut(s) 368, 555
GsuI CTGGAG 3 cut(s) 1399, 1566, 1578
HaeII RGCGCY 1 cut(s) 381
HaeIII GGCC 5 cut(s) 65, 336, 2119, 2171, 2305
HapII CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2033
HhaI GCGC 2 cut(s) 209, 380
Hin1II CATG 6 cut(s) 1132, 1444, 1981, 2284, 2288, 2314
Hin6I GCGC 2 cut(s) 207, 378
HinP1I GCGC 2 cut(s) 207, 378
HincII GTYRAC 3 cut(s) 1159, 1437, 2482
HindII GTYRAC 3 cut(s) 1159, 1437, 2482
HindIII AAGCTT 2 cut(s) 182, 216
HpaI GTTAAC 2 cut(s) 1159, 2482
HpaII CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2033
HphI GGTGA 8 cut(s) 97, 140, 922, 1446, 1736, 2017, 2164, 2251
Hpy166II GTNNAC 9 cut(s) 279, 874, 1159, 1437, 1564, 1741, 2077, 2259, 2482
Hpy188III TCNNGA 6 cut(s) 153, 246, 677, 1660, 1769, 2027
Hpy8I GTNNAC 9 cut(s) 279, 874, 1159, 1437, 1564, 1741, 2077, 2259, 2482
Hpy99I CGWCG 1 cut(s) 1392
HpyAV CCTTC 3 cut(s) 436, 1574, 2381
HpyCH4III ACNGT 8 cut(s) 116, 256, 276, 487, 823, 1865, 1892, 2002
HpyCH4IV ACGT 6 cut(s) 510, 699, 1025, 1560, 2053, 2073
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 224, 1842, 2120, 2168, 2353
HpyF3I CTNAG 8 cut(s) 480, 635, 797, 1401, 1735, 2061, 2163, 2475
HpySE526I ACGT 6 cut(s) 510, 699, 1025, 1560, 2053, 2073
Hsp92II CATG 6 cut(s) 1132, 1444, 1981, 2284, 2288, 2314
HspAI GCGC 2 cut(s) 207, 378
KpnI GGTACC 1 cut(s) 255
Ksp22I TGATCA 2 cut(s) 472, 2200
KspAI GTTAAC 2 cut(s) 1159, 2482
KspI CCGCGG 1 cut(s) 1846
LguI GCTCTTC 2 cut(s) 1895, 2133
LmnI GCTCC 3 cut(s) 1064, 1541, 2329
Lsp1109I GCAGC 4 cut(s) 651, 1318, 2249, 2359
LweI GCATC 8 cut(s) 218, 457, 588, 672, 745, 1204, 1653, 2118
MabI ACCWGGT 1 cut(s) 932
MaeI CTAG 3 cut(s) 677, 1190, 1344
MaeII ACGT 6 cut(s) 510, 699, 1025, 1560, 2053, 2073
MaeIII GTNAC 6 cut(s) 128, 140, 1452, 1478, 1588, 1769
MbiI CCGCTC 1 cut(s) 1014
MflI RGATCY 1 cut(s) 528
MhlI GDGCHC 4 cut(s) 492, 1639, 1907, 1970
MlyI GAGTC 7 cut(s) 407, 789, 1004, 1406, 1460, 1596, 1631
MmeI TCCRAC 1 cut(s) 79
Mph1103I ATGCAT 1 cut(s) 2286
MroXI GAANNNNTTC 1 cut(s) 2255
MseI TTAA 8 cut(s) 111, 447, 534, 1158, 1647, 2222, 2448, 2481
MslI CAYNNNNRTG 7 cut(s) 984, 1352, 1866, 1893, 2003, 2187, 2289
MspA1I CMGCKG 1 cut(s) 1845
MspI CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2033
MspR9I CCNGG 6 cut(s) 333, 934, 1140, 1631, 2033, 2159
MvaI CCWGG 4 cut(s) 934, 1140, 1631, 2159
MvnI CGCG 2 cut(s) 207, 1845
MwoI GCNNNNNNNGC 6 cut(s) 215, 224, 1842, 2120, 2168, 2353
NciI CCSGG 2 cut(s) 333, 2033
NdeI CATATG 1 cut(s) 565
NlaIII CATG 6 cut(s) 1132, 1444, 1981, 2284, 2288, 2314
NlaIV GGNNCC 5 cut(s) 253, 424, 1636, 1879, 2031
NmeAIII GCCGAG 2 cut(s) 406, 2266
NmuCI GTSAC 5 cut(s) 128, 140, 1452, 1588, 1769
NsiI ATGCAT 1 cut(s) 2286
NspI RCATGY 2 cut(s) 1981, 2284
OliI CACNNNNGTG 2 cut(s) 1866, 2003
PaeI GCATGC 1 cut(s) 2284
PaeR7I CTCGAG 1 cut(s) 244
PaqCI CACCTGC 1 cut(s) 2140
PasI CCCWGGG 1 cut(s) 1630
PciI ACATGT 1 cut(s) 1977
PciSI GCTCTTC 2 cut(s) 1895, 2133
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PdmI GAANNNNTTC 1 cut(s) 2255
PfeI GAWTC 3 cut(s) 149, 693, 2441
Pfl23II CGTACG 1 cut(s) 256
PflFI GACNNNGTC 2 cut(s) 134, 2052
PflMI CCANNNNNTGG 1 cut(s) 61
PkrI GCNGC 4 cut(s) 641, 1333, 2239, 2349
PleI GAGTC 7 cut(s) 406, 789, 1003, 1406, 1459, 1595, 1630
PpsI GAGTC 7 cut(s) 406, 789, 1003, 1406, 1459, 1595, 1630
PscI ACATGT 1 cut(s) 1977
PsiI TTATAA 1 cut(s) 1031
Psp1406I AACGTT 2 cut(s) 510, 699
Psp6I CCWGG 4 cut(s) 932, 1138, 1629, 2157
PspFI CCCAGC 2 cut(s) 364, 551
PspGI CCWGG 4 cut(s) 932, 1138, 1629, 2157
PspLI CGTACG 1 cut(s) 256
PspN4I GGNNCC 5 cut(s) 253, 424, 1636, 1879, 2031
PspPI GGNCC 3 cut(s) 334, 2029, 2169
PsuI RGATCY 1 cut(s) 528
PsyI GACNNNGTC 2 cut(s) 134, 2052
RseI CAYNNNNRTG 7 cut(s) 984, 1352, 1866, 1893, 2003, 2187, 2289
SacII CCGCGG 1 cut(s) 1846
SapI GCTCTTC 2 cut(s) 1895, 2133
SaqAI TTAA 8 cut(s) 111, 447, 534, 1158, 1647, 2222, 2448, 2481
SatI GCNGC 4 cut(s) 640, 1332, 2238, 2348
Sau96I GGNCC 3 cut(s) 334, 2029, 2169
ScaI AGTACT 1 cut(s) 2039
SchI GAGTC 7 cut(s) 407, 789, 1004, 1406, 1460, 1596, 1631
ScrFI CCNGG 6 cut(s) 333, 934, 1140, 1631, 2033, 2159
SduI GDGCHC 4 cut(s) 492, 1639, 1907, 1970
SexAI ACCWGGT 1 cut(s) 932
SfaNI GCATC 8 cut(s) 218, 457, 588, 672, 745, 1204, 1653, 2118
SfcI CTRYAG 1 cut(s) 192
Sfr274I CTCGAG 1 cut(s) 244
Sfr303I CCGCGG 1 cut(s) 1846
SgrBI CCGCGG 1 cut(s) 1846
SinI GGWCC 1 cut(s) 2029
SlaI CTCGAG 1 cut(s) 244
SmiMI CAYNNNNRTG 7 cut(s) 984, 1352, 1866, 1893, 2003, 2187, 2289
SmlI CTYRAG 1 cut(s) 244
SmoI CTYRAG 1 cut(s) 244
SphI GCATGC 1 cut(s) 2284
SsiI CCGC 6 cut(s) 705, 1014, 1303, 1843, 1845, 2044
SspMI CTAG 3 cut(s) 677, 1190, 1344
StyD4I CCNGG 6 cut(s) 331, 932, 1138, 1629, 2031, 2157
StyI CCWWGG 2 cut(s) 723, 1962
TaaI ACNGT 8 cut(s) 116, 256, 276, 487, 823, 1865, 1892, 2002
TaiI ACGT 6 cut(s) 513, 702, 1028, 1563, 2056, 2076
TaqI TCGA 6 cut(s) 154, 245, 596, 1233, 1578, 1659
TaqII GACCGA 1 cut(s) 876
TatI WGTACW 9 cut(s) 42, 503, 788, 852, 1202, 1315, 1563, 2037, 2076
TfiI GAWTC 3 cut(s) 149, 693, 2441
Tru1I TTAA 8 cut(s) 111, 447, 534, 1158, 1647, 2222, 2448, 2481
Tru9I TTAA 8 cut(s) 111, 447, 534, 1158, 1647, 2222, 2448, 2481
TscAI CASTG 8 cut(s) 145, 805, 1414, 1494, 1870, 2130, 2363, 2389
TseFI GTSAC 5 cut(s) 128, 140, 1452, 1588, 1769
TseI GCWGC 4 cut(s) 639, 1331, 2237, 2347
Tsp45I GTSAC 5 cut(s) 128, 140, 1452, 1588, 1769
TspDTI ATGAA 7 cut(s) 17, 334, 360, 562, 914, 1238, 1522
TspGWI ACGGA 2 cut(s) 1667, 1667
TspRI CASTG 8 cut(s) 145, 805, 1414, 1494, 1870, 2130, 2363, 2389
Tth111I GACNNNGTC 2 cut(s) 134, 2052
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 1 cut(s) 2029
XapI RAATTY 3 cut(s) 305, 497, 833
XbaI TCTAGA 1 cut(s) 676
XceI RCATGY 2 cut(s) 1981, 2284
XcmI CCANNNNNNNNNTGG 1 cut(s) 1803
XhoI CTCGAG 1 cut(s) 244
XmnI GAANNNNTTC 1 cut(s) 2255
XspI CTAG 3 cut(s) 677, 1190, 1344
ZrmI AGTACT 1 cut(s) 2039
Zsp2I ATGCAT 1 cut(s) 2286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.