Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

5022072 .. 5024612

Gene Structure 2541 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1061900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGAACAACCCCATCAGCAAACACCCTATTAAAACTCTCACTCCTCTTCTCCTTCCCCTTTTTCTCCGCATGATAGCCATACACATGGCCGGGGCCTTACCGCCCTACGTTCCGTCTGAACAAATCAGCCTTCAATGTGGCTCTGCCGGTCCCAAATTCGTCCGAGACTCCCGATATTGGGGTGGAGATATCCGCTCAATTTTTTTTCCATTCGAGCACCAAGCAGCTCGTAACAATTCCGTAGTCAAAGATTCACCTCTCTCTTCTTATTCCGGACAACCGCCTTACAGCTCAGCGAGGCTTTCCCGCTTTAAATTTACCTACACATTTCCACTCTCTGCCGGCCCAGTGTTCATCCGCTTGTATTTCTACCCAGCTTCTTACGCCCCCAACTTCAACCGATCCCAGGCCCTCTTCTCAGTCCAAGCCGGTGGCTTTACCCTTCTCCACGACTTCAACGCTTCAGCCACAGCTGATGCTTCTGCCTCGGATACTATATACAGAGAGTTCTGCCTCTGCCTCCACACTGAGTCAGGACATAATTTGAATATCACGTTCACTCCAAGCAACGCAAGCCCAGATGCCTACGCGTTTATCAATGGGATTGAAATTCTCTCCATGCCCCCATATCTTTACTACACTTCACCCCAAAGCCGGGATGGGGTTACTCATGTAGGCAGTGAAAACACTACTCGCATCAACAACAACACTGCCTTGGAGATGGTGTACCGAATCAATATCGGTGGCGAAAGGTGGATCTCTTCTGATCAGGACACTGGTATGTACCGCAATTGGGAAGGTATGGGAGACGAGTCCAACTACCTAGACGATTTAAGTAGGAAGTATAGTATTTTACAGCAAAACAGTAGCATTCAGCTTAACTTTTCTAAAATACCAGAGTACTCTGCTCCGAAAGAAGTTTACCAATCAAGCCGCTCAAAGGACACGAGCACGGACATGAACGTGACCATAATCGACAGGTACAATCTCACCTGGAAATTCCCTGTGGATTCAATGTTTGCTTACTTGGTTAGGCTTCATTTTTGTGAGTTTGATGGTGATGTGACGATGCCCGGATACCGTGTATTTAACATCTACATCGACAATCAATCCGCTGAGAAAATGGCGGATATAATCGAGTGGACTGGTGGAAATGAAAGACCAGTGTACAGAGACTATGTTGTGTTCATGTCGGGGAACCCTGCAATCCCGAAGAAAGTCAATCTCTTTCTTGAACTGGAATCGGATTTGTTGAATGGGTACTGGGTGGCAATCTTGAACGGACTCGAAATGTTCAAACTCAGTGCAAATCGGAGTCTCGCCGGACCAAGCCCTGACCCACCTCCTATAGCCCCAGCAAAGGGGACACCATCAAAACCTAGCACCAGATCAAGAACTCCTTTGCTTGCCACGGTTGTCGGTGTAGCTTGCGGAATACTTGGAGTCTCTGTCCTTGGGTTCTTGGTTTTCAGGCGGCGGCGGAAAGTCAAGAGCACTGCCTCAGATGGGTCATCATCTTTACCAACACATTTGTGTCGTTACTTTTCACTGGCAGAGATCAAAGCCGCCACCCAAAACTTCAACCAGAGTTTCATTGTTGGTGTAGGCGGCTTCGGTCACGTGTACAAAGGGCATATCGACGGCGGGGCCACTCCCGTTGCTATCAAACGGCTGAAACCCGAGTCATCGCAAGGAGCCCACGAGTTCAAGACGGAAATCGAGCTGCTCTCACAACTCAGACACCGCCATTTGGTGTCTCTCATTGGGTATTGTACTGATAAAAATGAGATGATTTTGGTGTACGATTACGTGGCACGTGGAACCCTCGCTGATCACCTCTACCAAACTGACAACCCACCTCTCTCCTGGGGACAACGGCTCCAAATTTGCATTGGCGCTGCGCGAGGGCTGCGCTACCTTCACAGCGATGCCCAGGGCACAATCATCCACCGTGATGTGAAGAGCACAAACATTTTATTGGATGAGAAATGGGTTGCCAAGGTTTCGGATTTCGGATTGTCGAAAGTGGGCACGGCCACCATGTCCAAGACCCACATCAGCACGGCCGTGAAAGGCAGTTTCGGGTATCTAGACCCGGAATACTACCGACGTCAACAACTGACGGTGAAGTCCGATGTGTACTCATTCGGTGTAGTGTTGTGTGAAGTACTGTGCGCAAGACCAGCTGTGGTGCATGCAACGGAGACGAGGCAAATGAACTTGGCTGAGTGGACCAAGAGCTGTCATCACGACGGGGAACTTGATCAAATCATCGATCCGAACATGAAGGGTAAGATTGAAACCGAGTGTTTGAACAAGTATGTGGAAATTGCTATGACTTGCATCCATGACAGTGGGATGGAAAGGCCGTCAATGAACGACGTTGTGAGGGGGCTTGAGTTTGCATTGCAACTACATCAGAACTGCGGTGAAAGGAACGAGGATGCCTTTGCTAGTGTGCCAGGTTGCACTACTAATGAATCCGTTCAGTGCATATCTGAGACGATCTTCTCAGAGATCAACGATCCGAATGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

847

Amino Acids

94.32

Weight (kDa)

6.77

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	87 - 433	1.1e-23	Malectin-like domain
Malectin	PF11721	242 - 396	8.2e-10	Malectin domain
Pkinase	PF00069	531 - 796	1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	533 - 798	9.5e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2128
AatII	GACGTC	1 cut(s)	2113
Acc16I	TGCGCA	1 cut(s)	2176
AccBSI	CCGCTC	2 cut(s)	195, 936
AccII	CGCG	2 cut(s)	590, 1903
AccIII	TCCGGA	1 cut(s)	272
AclWI	GGATC	4 cut(s)	396, 764, 2270, 2519
AcoI	YGGCCR	3 cut(s)	87, 2034, 2064
AcsI	RAATTY	5 cut(s)	155, 314, 609, 998, 1884
AcuI	CTGAAG	1 cut(s)	447
AcvI	CACGTG	2 cut(s)	1621, 1817
AcyI	GRCGYC	1 cut(s)	2110
AflIII	ACRYGT	2 cut(s)	588, 1620
AjnI	CCWGG	5 cut(s)	405, 992, 1865, 1932, 2461
AleI	CACNNNNGTG	2 cut(s)	1531, 2066
AluBI	AGCT	9 cut(s)	227, 291, 377, 473, 877, 1427, 1723, 2186, 2241
AluI	AGCT	9 cut(s)	227, 291, 377, 473, 877, 1427, 1723, 2186, 2241
Alw21I	GWGCWC	4 cut(s)	219, 953, 1496, 1967
Alw26I	GTCTC	8 cut(s)	159, 801, 1167, 1322, 1450, 1761, 2198, 2495
AlwI	GGATC	4 cut(s)	396, 764, 2270, 2519
Ama87I	CYCGRG	1 cut(s)	1679
Aor13HI	TCCGGA	1 cut(s)	272
AoxI	GGCC	8 cut(s)	87, 93, 343, 408, 1647, 2034, 2064, 2366
ApeKI	GCWGC	4 cut(s)	224, 1723, 1898, 1909
ApoI	RAATTY	5 cut(s)	155, 314, 609, 998, 1884
Asp700I	GAANNNNTTC	1 cut(s)	2484
AspLEI	GCGC	4 cut(s)	1898, 1903, 1914, 2177
AspS9I	GGNCC	7 cut(s)	93, 149, 344, 409, 1325, 1647, 2232
AsuC2I	CCSGG	4 cut(s)	91, 656, 1074, 2096
AsuHPI	GGTGA	7 cut(s)	246, 636, 982, 1070, 1826, 2137, 2441
AvaI	CYCGRG	1 cut(s)	1679
AvaII	GGWCC	3 cut(s)	149, 1325, 2232
BaeGI	GKGCMC	2 cut(s)	1940, 2033
BanII	GRGCYC	1 cut(s)	1699
BauI	CACGAG	2 cut(s)	946, 1700
BbrPI	CACGTG	2 cut(s)	1621, 1817
Bbv12I	GWGCWC	4 cut(s)	219, 953, 1496, 1967
BbvI	GCAGC	4 cut(s)	236, 1710, 1885, 1896
BccI	CCATC	7 cut(s)	20, 653, 715, 1049, 1378, 1499, 2353
BceAI	ACGGC	7 cut(s)	1657, 1685, 1892, 2049, 2051, 2079, 2353
BciT130I	CCWGG	5 cut(s)	407, 994, 1867, 1934, 2463
BciVI	GTATCC	2 cut(s)	484, 1070
BclI	TGATCA	3 cut(s)	766, 1831, 2263
BcnI	CCSGG	4 cut(s)	91, 656, 1074, 2096
BcoDI	GTCTC	8 cut(s)	159, 801, 1167, 1322, 1450, 1761, 2198, 2495
BfaI	CTAG	4 cut(s)	824, 1380, 2090, 2454
BfmI	CTRYAG	1 cut(s)	1347
BfoI	RGCGCY	1 cut(s)	1899
BfuI	GTATCC	2 cut(s)	484, 1070
BisI	GCNGC	9 cut(s)	225, 934, 1475, 1478, 1566, 1609, 1724, 1899, 1910
BlpI	GCTNAGC	1 cut(s)	292
BlsI	GCNGC	9 cut(s)	226, 935, 1476, 1479, 1567, 1610, 1725, 1900, 1911
BmcAI	AGTACT	2 cut(s)	902, 2169
Bme1390I	CCNGG	9 cut(s)	91, 407, 656, 994, 1074, 1867, 1934, 2096, 2463
Bme18I	GGWCC	3 cut(s)	149, 1325, 2232
BmeT110I	CYCGRG	1 cut(s)	1679
BmgT120I	GGNCC	7 cut(s)	93, 149, 344, 409, 1325, 1647, 2232
BmiI	GGNNCC	7 cut(s)	94, 151, 1199, 1648, 1696, 1822, 1880
BmrFI	CCNGG	9 cut(s)	91, 407, 656, 994, 1074, 1867, 1934, 2096, 2463
BmrI	ACTGGG	2 cut(s)	341, 1273
BmsI	GCATC	7 cut(s)	466, 571, 705, 1059, 1918, 2352, 2434
BmuI	ACTGGG	2 cut(s)	341, 1273
BplI	GAGNNNNNCTC	2 cut(s)	1712, 1744
Bpu1102I	GCTNAGC	1 cut(s)	292
BpuEI	CTTGAG	1 cut(s)	2417
BpuMI	CCSGG	4 cut(s)	91, 656, 1074, 2096
Bsa29I	ATCGAT	1 cut(s)	2274
BsaAI	YACGTR	3 cut(s)	1621, 1810, 1817
BsaHI	GRCGYC	1 cut(s)	2110
BsaWI	WCCGGW	1 cut(s)	272
Bse118I	RCCGGY	3 cut(s)	146, 341, 428
Bse1I	ACTGG	7 cut(s)	347, 781, 1150, 1163, 1242, 1268, 1554
Bse3DI	GCAATG	1 cut(s)	2405
BseAI	TCCGGA	1 cut(s)	272
BseBI	CCWGG	5 cut(s)	407, 994, 1867, 1934, 2463
BseCI	ATCGAT	1 cut(s)	2274
BseGI	GGATG	7 cut(s)	354, 664, 1944, 1987, 2343, 2364, 2449
BseMI	GCAATG	1 cut(s)	2405
BseNI	ACTGG	7 cut(s)	347, 781, 1150, 1163, 1242, 1268, 1554
BseRI	GAGGAG	1 cut(s)	33
BseSI	GKGCMC	2 cut(s)	1940, 2033
BseX3I	CGGCCG	1 cut(s)	2064
BseXI	GCAGC	4 cut(s)	236, 1710, 1885, 1896
BseYI	CCCAGC	2 cut(s)	373, 1354
Bsh1236I	CGCG	2 cut(s)	590, 1903
Bsh1285I	CGRYCG	1 cut(s)	2067
BshFI	GGCC	8 cut(s)	89, 95, 345, 410, 1649, 2036, 2066, 2368
BshVI	ATCGAT	1 cut(s)	2274
BsiEI	CGRYCG	1 cut(s)	2067
BsiHKAI	GWGCWC	4 cut(s)	219, 953, 1496, 1967
BsiHKCI	CYCGRG	1 cut(s)	1679
BsiSI	CCGG	9 cut(s)	90, 147, 273, 342, 429, 655, 1074, 1323, 2096
BslFI	GGGAC	3 cut(s)	135, 1378, 1884
BsmAI	GTCTC	8 cut(s)	159, 801, 1167, 1322, 1450, 1761, 2198, 2495
BsmBI	CGTCTC	3 cut(s)	801, 2198, 2495
BsmFI	GGGAC	3 cut(s)	135, 1378, 1884
BsmI	GAATGC	1 cut(s)	870
BsnI	GGCC	8 cut(s)	89, 95, 345, 410, 1649, 2036, 2066, 2368
BsoBI	CYCGRG	1 cut(s)	1679
Bsp1286I	GDGCHC	7 cut(s)	219, 953, 1496, 1699, 1940, 1967, 2033
Bsp13I	TCCGGA	1 cut(s)	272
Bsp1407I	TGTACA	2 cut(s)	1167, 1623
Bsp1720I	GCTNAGC	1 cut(s)	292
BspANI	GGCC	8 cut(s)	89, 95, 345, 410, 1649, 2036, 2066, 2368
BspDI	ATCGAT	1 cut(s)	2274
BspEI	TCCGGA	1 cut(s)	272
BspFNI	CGCG	2 cut(s)	590, 1903
BspLI	GGNNCC	7 cut(s)	94, 151, 1199, 1648, 1696, 1822, 1880
BspPI	GGATC	4 cut(s)	396, 764, 2270, 2519
BspQI	GCTCTTC	1 cut(s)	1955
BsrBI	CCGCTC	2 cut(s)	195, 936
BsrDI	GCAATG	1 cut(s)	2405
BsrFI	RCCGGY	3 cut(s)	146, 341, 428
BsrGI	TGTACA	2 cut(s)	1167, 1623
BsrI	ACTGG	7 cut(s)	347, 781, 1150, 1163, 1242, 1268, 1554
BssAI	RCCGGY	3 cut(s)	146, 341, 428
BssNI	GRCGYC	1 cut(s)	2110
BssSI	CACGAG	2 cut(s)	946, 1700
BssT1I	CCWWGG	3 cut(s)	714, 1453, 1998
Bst2BI	CACGAG	2 cut(s)	946, 1700
Bst2UI	CCWGG	5 cut(s)	407, 994, 1867, 1934, 2463
Bst4CI	ACNGT	7 cut(s)	866, 1082, 1414, 1952, 2125, 2172, 2354
Bst6I	CTCTTC	5 cut(s)	51, 268, 419, 766, 1955
BstACI	GRCGYC	1 cut(s)	2110
BstAUI	TGTACA	2 cut(s)	1167, 1623
BstBAI	YACGTR	3 cut(s)	1621, 1810, 1817
BstC8I	GCNNGC	5 cut(s)	343, 574, 1407, 1429, 2196
BstDSI	CCRYGG	1 cut(s)	1410
BstF5I	GGATG	7 cut(s)	354, 664, 1944, 1987, 2343, 2364, 2449
BstFNI	CGCG	2 cut(s)	590, 1903
BstH2I	RGCGCY	1 cut(s)	1899
BstHHI	GCGC	4 cut(s)	1898, 1903, 1914, 2177
BstMAI	GTCTC	8 cut(s)	159, 801, 1167, 1322, 1450, 1761, 2198, 2495
BstMCI	CGRYCG	1 cut(s)	2067
BstMWI	GCNNNNNNNGC	4 cut(s)	383, 573, 1909, 2183
BstNI	CCWGG	5 cut(s)	407, 994, 1867, 1934, 2463
BstNSI	RCATGY	1 cut(s)	2198
BstSCI	CCNGG	9 cut(s)	89, 405, 654, 992, 1072, 1865, 1932, 2094, 2461
BstSFI	CTRYAG	1 cut(s)	1347
BstSLI	GKGCMC	2 cut(s)	1940, 2033
BstUI	CGCG	2 cut(s)	590, 1903
BstV1I	GCAGC	4 cut(s)	236, 1710, 1885, 1896
BstX2I	RGATCY	1 cut(s)	756
BstXI	CCANNNNNNTGG	3 cut(s)	85, 431, 2354
BstYI	RGATCY	1 cut(s)	756
BstZI	CGGCCG	1 cut(s)	2064
Bsu15I	ATCGAT	1 cut(s)	2274
BsuI	GTATCC	2 cut(s)	484, 1070
BsuRI	GGCC	8 cut(s)	89, 95, 345, 410, 1649, 2036, 2066, 2368
BsuTUI	ATCGAT	1 cut(s)	2274
BtgI	CCRYGG	1 cut(s)	1410
BtgZI	GCGATG	2 cut(s)	1671, 1941
BtsCI	GGATG	7 cut(s)	354, 664, 1944, 1987, 2343, 2364, 2449
BtsI	GCAGTG	3 cut(s)	685, 708, 1494
Cac8I	GCNNGC	5 cut(s)	343, 574, 1407, 1429, 2196
CfoI	GCGC	4 cut(s)	1898, 1903, 1914, 2177
Cfr10I	RCCGGY	3 cut(s)	146, 341, 428
Cfr13I	GGNCC	7 cut(s)	93, 149, 344, 409, 1325, 1647, 2232
ClaI	ATCGAT	1 cut(s)	2274
CspCI	CAANNNNNGTGG	4 cut(s)	724, 759, 1639, 1674
DraI	TTTAAA	1 cut(s)	313
DrdI	GACNNNNNNGTC	1 cut(s)	2128
DseDI	GACNNNNNNGTC	1 cut(s)	2128
EaeI	YGGCCR	3 cut(s)	87, 2034, 2064
EagI	CGGCCG	1 cut(s)	2064
Eam1104I	CTCTTC	5 cut(s)	51, 268, 419, 766, 1955
EarI	CTCTTC	5 cut(s)	51, 268, 419, 766, 1955
EciI	GGCGGA	2 cut(s)	1142, 1495
EclXI	CGGCCG	1 cut(s)	2064
Eco130I	CCWWGG	3 cut(s)	714, 1453, 1998
Eco24I	GRGCYC	1 cut(s)	1699
Eco32I	GATATC	1 cut(s)	190
Eco47I	GGWCC	3 cut(s)	149, 1325, 2232
Eco52I	CGGCCG	1 cut(s)	2064
Eco57I	CTGAAG	1 cut(s)	447
Eco72I	CACGTG	2 cut(s)	1621, 1817
Eco88I	CYCGRG	1 cut(s)	1679
EcoO109I	RGGNCCY	2 cut(s)	93, 409
EcoRII	CCWGG	5 cut(s)	405, 992, 1865, 1932, 2461
EcoRV	GATATC	1 cut(s)	190
EcoT14I	CCWWGG	3 cut(s)	714, 1453, 1998
EcoT38I	GRGCYC	1 cut(s)	1699
ErhI	CCWWGG	3 cut(s)	714, 1453, 1998
Esp3I	CGTCTC	3 cut(s)	801, 2198, 2495
FalI	AAGNNNNNCTT	2 cut(s)	1384, 1416
FaqI	GGGAC	3 cut(s)	135, 1378, 1884
FauI	CCCGC	2 cut(s)	314, 1637
FbaI	TGATCA	3 cut(s)	766, 1831, 2263
Fnu4HI	GCNGC	9 cut(s)	225, 934, 1475, 1478, 1566, 1609, 1724, 1899, 1910
FokI	GGATG	7 cut(s)	341, 671, 1931, 1994, 2330, 2371, 2456
FriOI	GRGCYC	1 cut(s)	1699
Fsp4HI	GCNGC	9 cut(s)	225, 934, 1475, 1478, 1566, 1609, 1724, 1899, 1910
FspBI	CTAG	4 cut(s)	824, 1380, 2090, 2454
FspI	TGCGCA	1 cut(s)	2176
GlaI	GCGC	4 cut(s)	1897, 1902, 1913, 2176
GluI	GCNGC	9 cut(s)	225, 934, 1475, 1478, 1566, 1609, 1724, 1899, 1910
GsaI	CCCAGC	2 cut(s)	377, 1358
HaeII	RGCGCY	1 cut(s)	1899
HaeIII	GGCC	8 cut(s)	89, 95, 345, 410, 1649, 2036, 2066, 2368
HapII	CCGG	9 cut(s)	90, 147, 273, 342, 429, 655, 1074, 1323, 2096
HhaI	GCGC	4 cut(s)	1898, 1903, 1914, 2177
Hin1I	GRCGYC	1 cut(s)	2110
Hin6I	GCGC	4 cut(s)	1896, 1901, 1912, 2175
HinP1I	GCGC	4 cut(s)	1896, 1901, 1912, 2175
HincII	GTYRAC	1 cut(s)	2114
HindII	GTYRAC	1 cut(s)	2114
HpaII	CCGG	9 cut(s)	90, 147, 273, 342, 429, 655, 1074, 1323, 2096
HphI	GGTGA	7 cut(s)	246, 636, 982, 1070, 1826, 2137, 2441
Hpy99I	CGWCG	4 cut(s)	1643, 2112, 2255, 2384
HpyAV	CCTTC	6 cut(s)	62, 140, 452, 791, 1928, 2281
HpyCH4III	ACNGT	7 cut(s)	866, 1082, 1414, 1952, 2125, 2172, 2354
HpyCH4IV	ACGT	8 cut(s)	108, 554, 963, 1620, 1809, 1816, 2110, 2382
HpyF10VI	GCNNNNNNNGC	4 cut(s)	383, 573, 1909, 2183
HpySE526I	ACGT	8 cut(s)	108, 554, 963, 1620, 1809, 1816, 2110, 2382
Hsp92I	GRCGYC	1 cut(s)	2110
HspAI	GCGC	4 cut(s)	1896, 1901, 1912, 2175
Kpn2I	TCCGGA	1 cut(s)	272
KroI	GCCGGC	1 cut(s)	341
KroNI	GCCGGC	1 cut(s)	343
Ksp22I	TGATCA	3 cut(s)	766, 1831, 2263
LguI	GCTCTTC	1 cut(s)	1955
LmnI	GCTCC	3 cut(s)	913, 1694, 1884
Lsp1109I	GCAGC	4 cut(s)	236, 1710, 1885, 1896
LweI	GCATC	7 cut(s)	466, 571, 705, 1059, 1918, 2352, 2434
MaeI	CTAG	4 cut(s)	824, 1380, 2090, 2454
MaeII	ACGT	8 cut(s)	108, 554, 963, 1620, 1809, 1816, 2110, 2382
MaeIII	GTNAC	6 cut(s)	230, 664, 964, 1063, 1538, 1616
MbiI	CCGCTC	2 cut(s)	195, 936
MboII	GAAGA	7 cut(s)	38, 255, 406, 753, 1225, 1972, 2500
MfeI	CAATTG	1 cut(s)	790
MflI	RGATCY	1 cut(s)	756
MhlI	GDGCHC	7 cut(s)	219, 953, 1496, 1699, 1940, 1967, 2033
MluI	ACGCGT	1 cut(s)	588
MlyI	GAGTC	7 cut(s)	161, 539, 821, 1278, 1324, 1452, 1691
MmeI	TCCRAC	1 cut(s)	840
MroI	TCCGGA	1 cut(s)	272
MroNI	GCCGGC	1 cut(s)	341
MroXI	GAANNNNTTC	1 cut(s)	2484
MseI	TTAA	5 cut(s)	30, 312, 833, 879, 1089
MspA1I	CMGCKG	3 cut(s)	473, 1115, 2186
MspI	CCGG	9 cut(s)	90, 147, 273, 342, 429, 655, 1074, 1323, 2096
MspR9I	CCNGG	9 cut(s)	91, 407, 656, 994, 1074, 1867, 1934, 2096, 2463
MteI	GCGCNGCGC	1 cut(s)	1899
MunI	CAATTG	1 cut(s)	790
Mva1269I	GAATGC	1 cut(s)	870
MvaI	CCWGG	5 cut(s)	407, 994, 1867, 1934, 2463
MvnI	CGCG	2 cut(s)	590, 1903
MwoI	GCNNNNNNNGC	4 cut(s)	383, 573, 1909, 2183
NaeI	GCCGGC	1 cut(s)	343
NciI	CCSGG	4 cut(s)	91, 656, 1074, 2096
NgoMIV	GCCGGC	1 cut(s)	341
NlaIV	GGNNCC	7 cut(s)	94, 151, 1199, 1648, 1696, 1822, 1880
NmuCI	GTSAC	3 cut(s)	964, 1063, 1616
NsbI	TGCGCA	1 cut(s)	2176
NspI	RCATGY	1 cut(s)	2198
OliI	CACNNNNGTG	2 cut(s)	1531, 2066
PaeI	GCATGC	1 cut(s)	2198
PasI	CCCWGGG	1 cut(s)	1933
PciSI	GCTCTTC	1 cut(s)	1955
PctI	GAATGC	1 cut(s)	870
PdiI	GCCGGC	1 cut(s)	343
PdmI	GAANNNNTTC	1 cut(s)	2484
PfeI	GAWTC	5 cut(s)	251, 732, 1010, 1241, 2480
PkrI	GCNGC	9 cut(s)	226, 935, 1476, 1479, 1567, 1610, 1725, 1900, 1911
PleI	GAGTC	7 cut(s)	161, 538, 820, 1278, 1323, 1451, 1690
PmaCI	CACGTG	2 cut(s)	1621, 1817
PmlI	CACGTG	2 cut(s)	1621, 1817
PpsI	GAGTC	7 cut(s)	161, 538, 820, 1278, 1323, 1451, 1690
Ppu21I	YACGTR	3 cut(s)	1621, 1810, 1817
Psp6I	CCWGG	5 cut(s)	405, 992, 1865, 1932, 2461
PspCI	CACGTG	2 cut(s)	1621, 1817
PspFI	CCCAGC	2 cut(s)	373, 1354
PspGI	CCWGG	5 cut(s)	405, 992, 1865, 1932, 2461
PspN4I	GGNNCC	7 cut(s)	94, 151, 1199, 1648, 1696, 1822, 1880
PspPI	GGNCC	7 cut(s)	93, 149, 344, 409, 1325, 1647, 2232
PsuI	RGATCY	1 cut(s)	756
PvuII	CAGCTG	2 cut(s)	473, 2186
SapI	GCTCTTC	1 cut(s)	1955
SaqAI	TTAA	5 cut(s)	30, 312, 833, 879, 1089
SatI	GCNGC	9 cut(s)	225, 934, 1475, 1478, 1566, 1609, 1724, 1899, 1910
Sau96I	GGNCC	7 cut(s)	93, 149, 344, 409, 1325, 1647, 2232
ScaI	AGTACT	2 cut(s)	902, 2169
SchI	GAGTC	7 cut(s)	161, 539, 821, 1278, 1324, 1452, 1691
ScrFI	CCNGG	9 cut(s)	91, 407, 656, 994, 1074, 1867, 1934, 2096, 2463
SduI	GDGCHC	7 cut(s)	219, 953, 1496, 1699, 1940, 1967, 2033
SfaNI	GCATC	7 cut(s)	466, 571, 705, 1059, 1918, 2352, 2434
SfcI	CTRYAG	1 cut(s)	1347
SinI	GGWCC	3 cut(s)	149, 1325, 2232
SmlI	CTYRAG	1 cut(s)	2396
SmoI	CTYRAG	1 cut(s)	2396
SphI	GCATGC	1 cut(s)	2198
SspMI	CTAG	4 cut(s)	824, 1380, 2090, 2454
StyD4I	CCNGG	9 cut(s)	89, 405, 654, 992, 1072, 1865, 1932, 2094, 2461
StyI	CCWWGG	3 cut(s)	714, 1453, 1998
TaaI	ACNGT	7 cut(s)	866, 1082, 1414, 1952, 2125, 2172, 2354
TaiI	ACGT	8 cut(s)	111, 557, 966, 1623, 1812, 1819, 2113, 2385
TaqI	TCGA	9 cut(s)	213, 975, 1101, 1137, 1287, 1638, 1719, 2021, 2274
TaqII	GACCGA	1 cut(s)	1604
TatI	WGTACW	6 cut(s)	900, 1167, 1623, 1772, 2139, 2167
TauI	GCSGC	5 cut(s)	936, 1477, 1480, 1568, 1611
TfiI	GAWTC	5 cut(s)	251, 732, 1010, 1241, 2480
Tru1I	TTAA	5 cut(s)	30, 312, 833, 879, 1089
Tru9I	TTAA	5 cut(s)	30, 312, 833, 879, 1089
TseFI	GTSAC	3 cut(s)	964, 1063, 1616
TseI	GCWGC	4 cut(s)	224, 1723, 1898, 1909
Tsp45I	GTSAC	3 cut(s)	964, 1063, 1616
TspGWI	ACGGA	7 cut(s)	102, 229, 968, 1296, 1727, 2216, 2473
VpaK11BI	GGWCC	3 cut(s)	149, 1325, 2232
XapI	RAATTY	5 cut(s)	155, 314, 609, 998, 1884
XbaI	TCTAGA	1 cut(s)	2089
XceI	RCATGY	1 cut(s)	2198
XcmI	CCANNNNNNNNNTGG	3 cut(s)	656, 1863, 1889
XmnI	GAANNNNTTC	1 cut(s)	2484
XspI	CTAG	4 cut(s)	824, 1380, 2090, 2454
ZraI	GACGTC	1 cut(s)	2111
ZrmI	AGTACT	2 cut(s)	902, 2169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.