Rw2G048500

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
76066089 .. 76068662
2574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G048500.1

Sequence Viewer

Length: 2574 bp
ATGAAACCCATTCTCGCTCTACTTTACCCTTCCAGCTTGTTTCTACTCTCGGTCACCCTACTGGTGGCCGGAGAGTCCACAACCATCTACACTCCGACTGATGATATCACACTTAACTGTGGCTCTTCCGGTCGCATGTTCAGTAACTTTGATTTTCGAACTTGGAGTGGAGATATCAACTCAGAGCTTTCCCCCATAGAAGTTGGCGGTAGCACATCCCGAGGTTTGAAAGCACCACCGTCGTCCTCCACGGGCAGCCAAGTACCGTACACCACAGCACGACTTTCTCACTCGGAATTCAAGTACCGATTTCCCGTCAGACCGGGCCAAAAGTTCATCCGCTTGTACTTCTACCCAGGTTCATACAGTGCCAACTTCGACCGCTCCAAGTCTCTCTTCTCTGTCAAAACGGGTGGCTACACCCTTCTCAAGGACTTCAATGTTTCTATCAGTGCAGATGCTGATTATCTTGAGACAATGCTCAAAGAATTCTGTATTTACATTGAGCCAGAACAACAGATGCTGAACATCACATTCACTCCCAGCAAAGATGGATACGCTTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTATCTTTACCACAGTACTGCAGCCCAAGACGATGGGCCAAGTATTATCGGCAACGAAAACCGGAACGTCCCAGTGAAAAACCACACGGCTATGGAGATGATCTATCGAATCAACGTCGGCGGAAGTCCAGTCTCACCGAATGAAGACACGGGCATGTACCGCACCTGGGATTCAACGGACGAGATCTACTTAAATAATCCAAGTAGAACTTTGAGCATGTTATCACAAAGCAATAATACTCATCTCAAATTTGCAAAAATACCGAACTACACTGCGCCGGTAGACGTTTACCGAACCGGCCGGTCAATGGAGGTGAACAGAACCATCAGCAAGAGCTACAATCTCACCTGGGGGTTTCCTGTAGATCCACAATTTTATTACCTGGTGAGGCTCCATTTTTGTGAGATTATTTTTAGATTGGAGAGAGATCGTGTGTTTCAGATTTTTATAGCCGACCAACCAGCGGAACAGAGAGTGGACATAATCCAATGGAGTGGAGGAAATGGGATTCCCGTATATAGAGACTACCTTGTGTTCGTGCCCAGTCTTCCAAACAAGAAGAAAGTTGACATCTCTGTTGCACTACAAGCAAATCAAGACGATTCGAAAACTCGATATAATGATGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAGCGGAAATCTCGCCGGACCCAATCCCGACCAACCGCCGGCGGCCGACAAGATGAAGCCGGAAAGCCAAAGAAACCCGAAGAAGAAGTCGATTCCTATGCTTGCTATCATTGCCGGCGTAGTTTCCGTCTTACTTGTTCCTTCCCTATTCGGGTTTTTAGTTTTCAGGCGTACAAGAAAACTCAAGGACTCCGGCTCCAGCCACAGGATGACGAAATCAATCACCAACATTGGGTCACATATCCCGTCTTATTTGTGTCGGTACTTTGCACTGGCAGAGATCATAGCCGCCACCAAAAACTTCGATGACACTTTCATCGTTGGGATTGGTGGGTTTGGCCACGTGTACAAAGGACAATTCGATGATGGGGCCACCCTTGTTGCAATCAAAAGGCTTAAAGCCACTTCTGCGCAGGGGGCCCACGAGTTCATGACGGAAATCAAGATGCTCTCTGAACTGCGCCATCGTCATTTGGTGTCTCTGATTGGATATTGTGCTGATCAAGGTGAGATGCTTTTAGTGTACGATTACATGTCACGAGGGACCCTTAGTGATCATTTGCACCACATCGAGAAACCGCATCTTCCTTGGGAACGACGACTTCGGATTTGTATCGGTGCAGCTCAAGGTTTGCACTACCTTCATACAGGTTCCAAAGGCACCATCATTCACCGTGACGTAAAGAGCACAAACATATTATTAGACGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCAAAAATGGGCAATATCACAATATCTAAAACCCACATTAGCACGAAGGTGAAGGGTAGTTTCGGATATGTTGACCCTGATTATTACCGGCGTCAACAATTGACTGAGAAGTCTGACGTGTACTCATTTGGCGTAGTGTTATGCGAAGTATTGTGTGGGAGGCCAGCTGTGACCATTGTGGACAATAATCGAGTTGGCTTGGCTGGATGGGCCAAAAAGTGTCATCGCAATGGGCAATTTGATCAGATTGTTGACCCAAATTTGAAGGGTGAAATTGCAGTGCGATGCTTGCATAAATTTGCTTCCATTGCAATGAGTTGCTTGGATGATAATGGGATCAATCGGCCCTCAATGGATGATGTTGTGAGAGGGCTTCAGTTTGCATTGCAGATGCAGGAAAACAACGAGGATTATATTGATCACATTGAAAGGACGGTTCAACATGAGATTTCATTGATCACGGACAATGAAGGGTCTTGTTCTAGTGTGCAAAGCAGTGGGGCGAACGAATCCATTCAAGAGTTGACTGGGACAATTTTTTCTGAGATCATTGATCCGGTTGGAAGATAA

Protein Analysis

857

Amino Acids

95.92

Weight (kDa)

7.6

Isoelectric Point (pI)

39.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 80 - 417 6.1e-27 Malectin-like domain
Malectin PF11721 233 - 376 8e-10 Malectin domain
Pkinase PF00069 527 - 790 6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 528 - 791 1.1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2113
Acc16I TGCGCA 1 cut(s) 1674
AccB1I GGYRCC 1 cut(s) 1922
AccBSI CCGCTC 1 cut(s) 384
AccI GTMKAC 1 cut(s) 879
AclWI GGATC 3 cut(s) 956, 2348, 2552
AcoI YGGCCR 4 cut(s) 66, 895, 1305, 1600
AcsI RAATTY 5 cut(s) 296, 488, 845, 2263, 2300
AcuI CTGAAG 1 cut(s) 2363
AcvI CACGTG 1 cut(s) 1606
AcyI GRCGYC 1 cut(s) 2095
AfiI CCNNNNNNNGG 9 cut(s) 64, 430, 763, 904, 1060, 1300, 1413, 1467, 1494
AflIII ACRYGT 3 cut(s) 1605, 1794, 2121
AjiI CACGTC 1 cut(s) 2122
AjnI CCWGG 4 cut(s) 355, 761, 944, 978
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AleI CACNNNNGTG 1 cut(s) 2051
AluBI AGCT 5 cut(s) 36, 187, 933, 1886, 2171
AluI AGCT 5 cut(s) 36, 187, 933, 1886, 2171
Alw21I GWGCWC 1 cut(s) 1952
Alw26I GTCTC 5 cut(s) 396, 467, 733, 1113, 1746
AlwI GGATC 3 cut(s) 956, 2348, 2552
AlwNI CAGNNNCTG 2 cut(s) 461, 523
Ama87I CYCGRG 1 cut(s) 219
ApaI GGGCCC 1 cut(s) 1684
ApeKI GCWGC 3 cut(s) 255, 617, 1883
ApoI RAATTY 5 cut(s) 296, 488, 845, 2263, 2300
ArsI GACNNNNNNTTYG 4 cut(s) 1334, 1366, 1854, 1886
Asp700I GAANNNNTTC 1 cut(s) 2517
AspLEI GCGC 3 cut(s) 874, 1675, 1725
AspS9I GGNCC 9 cut(s) 325, 632, 1280, 1632, 1680, 1681, 1806, 2214, 2349
AsuC2I CCSGG 1 cut(s) 324
AsuII TTCGAA 2 cut(s) 157, 1202
AvaI CYCGRG 1 cut(s) 219
AvaII GGWCC 2 cut(s) 1280, 1806
BaeGI GKGCMC 2 cut(s) 1140, 1684
BalI TGGCCA 1 cut(s) 1602
BanI GGYRCC 1 cut(s) 1922
BanII GRGCYC 2 cut(s) 1239, 1684
BauI CACGAG 2 cut(s) 1685, 1800
BbrPI CACGTG 1 cut(s) 1606
BbsI GAAGAC 2 cut(s) 747, 1136
Bbv12I GWGCWC 1 cut(s) 1952
BbvI GCAGC 3 cut(s) 267, 629, 1895
BccI CCATC 8 cut(s) 92, 545, 623, 929, 1622, 1734, 1934, 2205
BceAI ACGGC 1 cut(s) 699
BcgI CGANNNNNNTGC 4 cut(s) 222, 256, 1342, 1376
BciT130I CCWGG 4 cut(s) 357, 763, 946, 980
BciVI GTATCC 1 cut(s) 548
BclI TGATCA 5 cut(s) 1762, 1816, 2245, 2422, 2460
BcnI CCSGG 1 cut(s) 324
BcoDI GTCTC 5 cut(s) 396, 467, 733, 1113, 1746
BfaI CTAG 1 cut(s) 2487
BfmI CTRYAG 2 cut(s) 615, 957
BfuI GTATCC 1 cut(s) 548
BglII AGATCT 1 cut(s) 780
BisI GCNGC 5 cut(s) 256, 618, 1305, 1551, 1884
BlsI GCNGC 5 cut(s) 257, 619, 1306, 1552, 1885
BmcAI AGTACT 1 cut(s) 613
Bme1390I CCNGG 5 cut(s) 324, 357, 763, 946, 980
Bme18I GGWCC 2 cut(s) 1280, 1806
BmeT110I CYCGRG 1 cut(s) 219
BmgBI CACGTC 1 cut(s) 2122
BmgT120I GGNCC 9 cut(s) 325, 632, 1280, 1632, 1680, 1681, 1806, 2214, 2349
BmrFI CCNGG 5 cut(s) 324, 357, 763, 946, 980
BmrI ACTGGG 3 cut(s) 662, 1134, 2541
BmsI GCATC 8 cut(s) 448, 510, 1210, 1698, 1764, 1852, 2279, 2385
BmuI ACTGGG 3 cut(s) 662, 1134, 2541
BpiI GAAGAC 2 cut(s) 747, 1136
BpmI CTGGAG 1 cut(s) 1444
Bpu14I TTCGAA 2 cut(s) 157, 1202
BpuEI CTTGAG 4 cut(s) 413, 491, 1430, 1872
BpuMI CCSGG 1 cut(s) 324
BsaAI YACGTR 1 cut(s) 1606
BsaBI GATNNNNATC 1 cut(s) 1874
BsaHI GRCGYC 1 cut(s) 2095
BsaJI CCNNGG 7 cut(s) 220, 249, 355, 762, 945, 1850, 1983
BsaWI WCCGGW 3 cut(s) 128, 657, 2560
BsaXI ACNNNNNCTCC 4 cut(s) 523, 553, 1442, 1472
Bsc4I CCNNNNNNNGG 9 cut(s) 64, 430, 763, 904, 1060, 1300, 1413, 1467, 1494
Bse118I RCCGGY 6 cut(s) 874, 893, 897, 1300, 1376, 2091
Bse1I ACTGG 6 cut(s) 66, 668, 725, 1140, 1539, 2536
Bse3DI GCAATG 5 cut(s) 1371, 2239, 2310, 2322, 2387
Bse8I GATNNNNATC 1 cut(s) 1874
BseBI CCWGG 4 cut(s) 357, 763, 946, 980
BseDI CCNNGG 7 cut(s) 220, 249, 355, 762, 945, 1850, 1983
BseGI GGATG 6 cut(s) 215, 336, 1476, 2216, 2335, 2365
BseJI GATNNNNATC 1 cut(s) 1874
BseLI CCNNNNNNNGG 9 cut(s) 64, 430, 763, 904, 1060, 1300, 1413, 1467, 1494
BseMI GCAATG 5 cut(s) 1371, 2239, 2310, 2322, 2387
BseMII CTCAG 3 cut(s) 195, 2100, 2538
BseNI ACTGG 6 cut(s) 66, 668, 725, 1140, 1539, 2536
BseSI GKGCMC 2 cut(s) 1140, 1684
BseX3I CGGCCG 2 cut(s) 895, 1305
BseXI GCAGC 3 cut(s) 267, 629, 1895
BseYI CCCAGC 1 cut(s) 542
BsgI GTGCAG 2 cut(s) 474, 1902
Bsh1285I CGRYCG 4 cut(s) 133, 382, 898, 1308
BshNI GGYRCC 1 cut(s) 1922
BsiEI CGRYCG 4 cut(s) 133, 382, 898, 1308
BsiHKAI GWGCWC 1 cut(s) 1952
BsiHKCI CYCGRG 1 cut(s) 219
BslFI GGGAC 3 cut(s) 650, 1819, 2548
BslI CCNNNNNNNGG 9 cut(s) 64, 430, 763, 904, 1060, 1300, 1413, 1467, 1494
BsmAI GTCTC 5 cut(s) 396, 467, 733, 1113, 1746
BsmFI GGGAC 3 cut(s) 650, 1819, 2548
BsoBI CYCGRG 1 cut(s) 219
Bsp119I TTCGAA 2 cut(s) 157, 1202
Bsp120I GGGCCC 1 cut(s) 1680
Bsp1286I GDGCHC 4 cut(s) 1140, 1239, 1684, 1952
Bsp1407I TGTACA 1 cut(s) 1608
BspCNI CTCAG 3 cut(s) 194, 2101, 2539
BspHI TCATGA 1 cut(s) 1692
BspMAI CTGCAG 1 cut(s) 619
BspPI GGATC 3 cut(s) 956, 2348, 2552
BspQI GCTCTTC 1 cut(s) 130
BspT104I TTCGAA 2 cut(s) 157, 1202
BspT107I GGYRCC 1 cut(s) 1922
BsrBI CCGCTC 1 cut(s) 384
BsrDI GCAATG 5 cut(s) 1371, 2239, 2310, 2322, 2387
BsrFI RCCGGY 6 cut(s) 874, 893, 897, 1300, 1376, 2091
BsrGI TGTACA 1 cut(s) 1608
BsrI ACTGG 6 cut(s) 66, 668, 725, 1140, 1539, 2536
BssAI RCCGGY 6 cut(s) 874, 893, 897, 1300, 1376, 2091
BssECI CCNNGG 7 cut(s) 220, 249, 355, 762, 945, 1850, 1983
BssNI GRCGYC 1 cut(s) 2095
BssSI CACGAG 2 cut(s) 1685, 1800
BssT1I CCWWGG 2 cut(s) 1850, 1983
Bst2BI CACGAG 2 cut(s) 1685, 1800
Bst2UI CCWGG 4 cut(s) 357, 763, 946, 980
Bst4CI ACNGT 7 cut(s) 119, 240, 267, 368, 611, 1937, 2440
Bst6I CTCTTC 2 cut(s) 130, 401
BstACI GRCGYC 1 cut(s) 2095
BstAUI TGTACA 1 cut(s) 1608
BstBAI YACGTR 1 cut(s) 1606
BstBI TTCGAA 2 cut(s) 157, 1202
BstC8I GCNNGC 6 cut(s) 594, 1302, 1365, 1378, 2169, 2294
BstDEI CTNAG 4 cut(s) 181, 1811, 2109, 2547
BstDSI CCRYGG 1 cut(s) 249
BstEII GGTNACC 1 cut(s) 52
BstENI CCTNNNNNAGG 1 cut(s) 428
BstF5I GGATG 6 cut(s) 215, 336, 1476, 2216, 2335, 2365
BstHHI GCGC 3 cut(s) 874, 1675, 1725
BstMAI GTCTC 5 cut(s) 396, 467, 733, 1113, 1746
BstMCI CGRYCG 4 cut(s) 133, 382, 898, 1308
BstMWI GCNNNNNNNGC 8 cut(s) 756, 1184, 1373, 1670, 1679, 2213, 2293, 2312
BstNI CCWGG 4 cut(s) 357, 763, 946, 980
BstNSI RCATGY 4 cut(s) 139, 754, 817, 1798
BstPI GGTNACC 1 cut(s) 52
BstSCI CCNGG 5 cut(s) 322, 355, 761, 944, 978
BstSFI CTRYAG 2 cut(s) 615, 957
BstSLI GKGCMC 2 cut(s) 1140, 1684
BstV1I GCAGC 3 cut(s) 267, 629, 1895
BstV2I GAAGAC 2 cut(s) 747, 1136
BstX2I RGATCY 2 cut(s) 780, 961
BstXI CCANNNNNNTGG 2 cut(s) 629, 1091
BstYI RGATCY 2 cut(s) 780, 961
BstZI CGGCCG 2 cut(s) 895, 1305
BsuI GTATCC 1 cut(s) 548
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 2 cut(s) 2213, 2302
BtrI CACGTC 1 cut(s) 2122
BtsCI GGATG 6 cut(s) 215, 336, 1476, 2216, 2335, 2365
BtsI GCAGTG 3 cut(s) 867, 2289, 2506
BtsIMutI CAGTG 7 cut(s) 373, 457, 675, 867, 1532, 2289, 2506
Cac8I GCNNGC 6 cut(s) 594, 1302, 1365, 1378, 2169, 2294
CaiI CAGNNNCTG 2 cut(s) 461, 523
CciI TCATGA 1 cut(s) 1692
CfoI GCGC 3 cut(s) 874, 1675, 1725
Cfr10I RCCGGY 6 cut(s) 874, 893, 897, 1300, 1376, 2091
Cfr13I GGNCC 9 cut(s) 325, 632, 1280, 1632, 1680, 1681, 1806, 2214, 2349
CseI GACGC 1 cut(s) 2084
CsiI ACCWGGT 1 cut(s) 978
CspCI CAANNNNNGTGG 4 cut(s) 394, 429, 1624, 1659
CviAII CATG 7 cut(s) 136, 589, 751, 814, 1693, 1795, 2447
DdeI CTNAG 4 cut(s) 181, 1811, 2109, 2547
DrdI GACNNNNNNGTC 1 cut(s) 2113
DseDI GACNNNNNNGTC 1 cut(s) 2113
EaeI YGGCCR 4 cut(s) 66, 895, 1305, 1600
EagI CGGCCG 2 cut(s) 895, 1305
Eam1104I CTCTTC 2 cut(s) 130, 401
EarI CTCTTC 2 cut(s) 130, 401
EciI GGCGGA 1 cut(s) 732
EclXI CGGCCG 2 cut(s) 895, 1305
Eco130I CCWWGG 2 cut(s) 1850, 1983
Eco24I GRGCYC 2 cut(s) 1239, 1684
Eco32I GATATC 2 cut(s) 106, 175
Eco47I GGWCC 2 cut(s) 1280, 1806
Eco52I CGGCCG 2 cut(s) 895, 1305
Eco57I CTGAAG 1 cut(s) 2363
Eco72I CACGTG 1 cut(s) 1606
Eco88I CYCGRG 1 cut(s) 219
Eco91I GGTNACC 1 cut(s) 52
EcoNI CCTNNNNNAGG 1 cut(s) 428
EcoO109I RGGNCCY 2 cut(s) 1680, 1806
EcoO65I GGTNACC 1 cut(s) 52
EcoRI GAATTC 2 cut(s) 296, 488
EcoRII CCWGG 4 cut(s) 355, 761, 944, 978
EcoRV GATATC 2 cut(s) 106, 175
EcoT14I CCWWGG 2 cut(s) 1850, 1983
EcoT38I GRGCYC 2 cut(s) 1239, 1684
ErhI CCWWGG 2 cut(s) 1850, 1983
FaeI CATG 7 cut(s) 139, 592, 754, 817, 1696, 1798, 2450
FalI AAGNNNNNCTT 4 cut(s) 380, 412, 790, 822
FaqI GGGAC 3 cut(s) 650, 1819, 2548
FatI CATG 7 cut(s) 135, 588, 750, 813, 1692, 1794, 2446
FbaI TGATCA 5 cut(s) 1762, 1816, 2245, 2422, 2460
FblI GTMKAC 1 cut(s) 879
Fnu4HI GCNGC 5 cut(s) 256, 618, 1305, 1551, 1884
FokI GGATG 6 cut(s) 202, 323, 1483, 2223, 2342, 2372
FriOI GRGCYC 2 cut(s) 1239, 1684
Fsp4HI GCNGC 5 cut(s) 256, 618, 1305, 1551, 1884
FspBI CTAG 1 cut(s) 2487
FspI TGCGCA 1 cut(s) 1674
GlaI GCGC 3 cut(s) 873, 1674, 1724
GluI GCNGC 5 cut(s) 256, 618, 1305, 1551, 1884
GsaI CCCAGC 1 cut(s) 546
GsuI CTGGAG 1 cut(s) 1444
HgaI GACGC 1 cut(s) 2084
HhaI GCGC 3 cut(s) 874, 1675, 1725
Hin1I GRCGYC 1 cut(s) 2095
Hin1II CATG 7 cut(s) 139, 592, 754, 817, 1696, 1798, 2450
Hin6I GCGC 3 cut(s) 872, 1673, 1723
HinP1I GCGC 3 cut(s) 872, 1673, 1723
HincII GTYRAC 5 cut(s) 1165, 2077, 2099, 2257, 2529
HindII GTYRAC 5 cut(s) 1165, 2077, 2099, 2257, 2529
HinfI GANTC 8 cut(s) 74, 705, 767, 1105, 1199, 1354, 1451, 2513
Hpy99I CGWCG 3 cut(s) 244, 716, 1863
HpyAV CCTTC 8 cut(s) 39, 434, 1413, 1913, 2044, 2050, 2263, 2468
HpyCH4III ACNGT 7 cut(s) 119, 240, 267, 368, 611, 1937, 2440
HpyCH4IV ACGT 6 cut(s) 663, 711, 882, 1605, 1941, 2121
HpyF10VI GCNNNNNNNGC 8 cut(s) 756, 1184, 1373, 1670, 1679, 2213, 2293, 2312
HpyF3I CTNAG 4 cut(s) 181, 1811, 2109, 2547
HpySE526I ACGT 6 cut(s) 663, 711, 882, 1605, 1941, 2121
Hsp92I GRCGYC 1 cut(s) 2095
Hsp92II CATG 7 cut(s) 139, 592, 754, 817, 1696, 1798, 2450
HspAI GCGC 3 cut(s) 872, 1673, 1723
KflI GGGWCCC 1 cut(s) 1806
KroI GCCGGC 2 cut(s) 1300, 1376
KroNI GCCGGC 2 cut(s) 1302, 1378
Ksp22I TGATCA 5 cut(s) 1762, 1816, 2245, 2422, 2460
LguI GCTCTTC 1 cut(s) 130
LmnI GCTCC 3 cut(s) 389, 993, 1463
Lsp1109I GCAGC 3 cut(s) 267, 629, 1895
LweI GCATC 8 cut(s) 448, 510, 1210, 1698, 1764, 1852, 2279, 2385
MabI ACCWGGT 1 cut(s) 978
MaeI CTAG 1 cut(s) 2487
MaeII ACGT 6 cut(s) 663, 711, 882, 1605, 1941, 2121
MaeIII GTNAC 6 cut(s) 52, 143, 1497, 1797, 1937, 2173
MbiI CCGCTC 1 cut(s) 384
MboII GAAGA 9 cut(s) 117, 388, 752, 1136, 1168, 1237, 1354, 1357, 1838
MfeI CAATTG 1 cut(s) 2102
MflI RGATCY 2 cut(s) 780, 961
MhlI GDGCHC 4 cut(s) 1140, 1239, 1684, 1952
MlsI TGGCCA 1 cut(s) 1602
MluNI TGGCCA 1 cut(s) 1602
MlyI GAGTC 2 cut(s) 83, 1445
MmeI TCCRAC 2 cut(s) 119, 2545
Mox20I TGGCCA 1 cut(s) 1602
MreI CGCCGGCG 1 cut(s) 1300
MroNI GCCGGC 2 cut(s) 1300, 1376
MroXI GAANNNNTTC 1 cut(s) 2517
MscI TGGCCA 1 cut(s) 1602
MseI TTAA 3 cut(s) 114, 788, 1659
MslI CAYNNNNRTG 6 cut(s) 686, 749, 996, 2051, 2232, 2315
Msp20I TGGCCA 1 cut(s) 1602
MspA1I CMGCKG 2 cut(s) 1061, 2171
MspR9I CCNGG 5 cut(s) 324, 357, 763, 946, 980
MunI CAATTG 1 cut(s) 2102
MvaI CCWGG 4 cut(s) 357, 763, 946, 980
MwoI GCNNNNNNNGC 8 cut(s) 756, 1184, 1373, 1670, 1679, 2213, 2293, 2312
NaeI GCCGGC 2 cut(s) 1302, 1378
NciI CCSGG 1 cut(s) 324
NgoMIV GCCGGC 2 cut(s) 1300, 1376
NlaIII CATG 7 cut(s) 139, 592, 754, 817, 1696, 1798, 2450
NmuCI GTSAC 5 cut(s) 52, 1497, 1797, 1937, 2173
NsbI TGCGCA 1 cut(s) 1674
NspI RCATGY 4 cut(s) 139, 754, 817, 1798
NspV TTCGAA 2 cut(s) 157, 1202
OliI CACNNNNGTG 1 cut(s) 2051
PagI TCATGA 1 cut(s) 1692
PciI ACATGT 1 cut(s) 1794
PciSI GCTCTTC 1 cut(s) 130
PdiI GCCGGC 2 cut(s) 1302, 1378
PdmI GAANNNNTTC 1 cut(s) 2517
PfeI GAWTC 6 cut(s) 705, 767, 1105, 1199, 1354, 2513
PkrI GCNGC 5 cut(s) 257, 619, 1306, 1552, 1885
PleI GAGTC 2 cut(s) 82, 1445
PmaCI CACGTG 1 cut(s) 1606
PmlI CACGTG 1 cut(s) 1606
PpsI GAGTC 2 cut(s) 82, 1445
Ppu21I YACGTR 1 cut(s) 1606
PpuMI RGGWCCY 1 cut(s) 1806
PscI ACATGT 1 cut(s) 1794
Psp5II RGGWCCY 1 cut(s) 1806
Psp6I CCWGG 4 cut(s) 355, 761, 944, 978
PspCI CACGTG 1 cut(s) 1606
PspEI GGTNACC 1 cut(s) 52
PspFI CCCAGC 1 cut(s) 542
PspGI CCWGG 4 cut(s) 355, 761, 944, 978
PspOMI GGGCCC 1 cut(s) 1680
PspPI GGNCC 9 cut(s) 325, 632, 1280, 1632, 1680, 1681, 1806, 2214, 2349
PspPPI RGGWCCY 1 cut(s) 1806
PstI CTGCAG 1 cut(s) 619
PstNI CAGNNNCTG 2 cut(s) 461, 523
PsuI RGATCY 2 cut(s) 780, 961
PvuII CAGCTG 1 cut(s) 2171
RseI CAYNNNNRTG 6 cut(s) 686, 749, 996, 2051, 2232, 2315
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 3 cut(s) 114, 788, 1659
SatI GCNGC 5 cut(s) 256, 618, 1305, 1551, 1884
Sau96I GGNCC 9 cut(s) 325, 632, 1280, 1632, 1680, 1681, 1806, 2214, 2349
ScaI AGTACT 1 cut(s) 613
SchI GAGTC 2 cut(s) 83, 1445
ScrFI CCNGG 5 cut(s) 324, 357, 763, 946, 980
SduI GDGCHC 4 cut(s) 1140, 1239, 1684, 1952
SexAI ACCWGGT 1 cut(s) 978
SfaNI GCATC 8 cut(s) 448, 510, 1210, 1698, 1764, 1852, 2279, 2385
SfcI CTRYAG 2 cut(s) 615, 957
SfuI TTCGAA 2 cut(s) 157, 1202
SgrAI CRCCGGYG 1 cut(s) 1300
SinI GGWCC 2 cut(s) 1280, 1806
SmiMI CAYNNNNRTG 6 cut(s) 686, 749, 996, 2051, 2232, 2315
SmlI CTYRAG 4 cut(s) 428, 470, 1445, 1887
SmoI CTYRAG 4 cut(s) 428, 470, 1445, 1887
SspMI CTAG 1 cut(s) 2487
StyD4I CCNGG 5 cut(s) 322, 355, 761, 944, 978
StyI CCWWGG 2 cut(s) 1850, 1983
TaaI ACNGT 7 cut(s) 119, 240, 267, 368, 611, 1937, 2440
TaiI ACGT 6 cut(s) 666, 714, 885, 1608, 1944, 2124
TaqII GACCGA 1 cut(s) 40
TatI WGTACW 4 cut(s) 345, 611, 1608, 2124
TauI GCSGC 2 cut(s) 1307, 1553
TfiI GAWTC 6 cut(s) 705, 767, 1105, 1199, 1354, 2513
Tru1I TTAA 3 cut(s) 114, 788, 1659
Tru9I TTAA 3 cut(s) 114, 788, 1659
TscAI CASTG 7 cut(s) 373, 457, 675, 874, 1539, 2289, 2506
TseFI GTSAC 5 cut(s) 52, 1497, 1797, 1937, 2173
TseI GCWGC 3 cut(s) 255, 617, 1883
Tsp45I GTSAC 5 cut(s) 52, 1497, 1797, 1937, 2173
TspGWI ACGGA 4 cut(s) 788, 1378, 1712, 2480
TspRI CASTG 7 cut(s) 373, 457, 675, 874, 1539, 2289, 2506
VpaK11BI GGWCC 2 cut(s) 1280, 1806
XagI CCTNNNNNAGG 1 cut(s) 428
XapI RAATTY 5 cut(s) 296, 488, 845, 2263, 2300
XceI RCATGY 4 cut(s) 139, 754, 817, 1798
XmiI GTMKAC 1 cut(s) 879
XmnI GAANNNNTTC 1 cut(s) 2517
XspI CTAG 1 cut(s) 2487
ZrmI AGTACT 1 cut(s) 613
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.