RchiOBHm_Chr2g0165321

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
80342034 .. 80342498
465 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53328

Sequence Viewer

Length: 465 bp
ATGAAACCAACTATCGCTCCTCTGTACCTTTCCTTGTTTCTTCACATCCTCACCCTACTTGTATCCGGTGATCCACCACCTATCTACACTCCGGTGGAAGATATCACCCTCAACTGTGGCTATTCCGGTAGCTTACAGGATTTCTATAGTAACCGGAATTGGACTGGAGATATCAACTCAAAGTTGTCCCCCATAGAAGCTGGTAACACTACCTCCCAAGTCAAAGAAGCACCACCTTCCTCCTCCTCAGCTAGCCAAGTACCATACACCACTGCACGGTTATCTTGTTACGAATTTACATACCGATTTGACAACCTCACTGCTGGCCAGAAGTTCATTCGGTTGTATTTCAACCCAGCTTCGTACCCAAACTTCGAGCACTCCAAAGCTCTCTTCTCTGTCAAAGTTGGTCGATATACGCTTCTCAATGATCTCAATGCTTCAGCTACGTACTGCAGATGCTAA

Protein Analysis

154

Amino Acids

17.16

Weight (kDa)

7.63

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 65
AcoI YGGCCR 1 cut(s) 325
AcsI RAATTY 1 cut(s) 293
AcuI CTGAAG 1 cut(s) 426
AfaI GTAC 4 cut(s) 26, 261, 365, 452
AfiI CCNNNNNNNGG 1 cut(s) 276
AgsI TTSAA 1 cut(s) 352
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
AleI CACNNNNGTG 1 cut(s) 92
AluBI AGCT 6 cut(s) 132, 200, 251, 359, 389, 446
AluI AGCT 6 cut(s) 132, 200, 251, 359, 389, 446
Alw21I GWGCWC 1 cut(s) 381
AlwI GGATC 1 cut(s) 65
AoxI GGCC 1 cut(s) 325
ApoI RAATTY 1 cut(s) 293
AsuHPI GGTGA 3 cut(s) 43, 80, 97
AsuNHI GCTAGC 1 cut(s) 251
BalI TGGCCA 1 cut(s) 327
BarI GAAGNNNNNNTAC 2 cut(s) 356, 388
Bbv12I GWGCWC 1 cut(s) 381
BbvCI CCTCAGC 1 cut(s) 247
BciVI GTATCC 1 cut(s) 73
BfaI CTAG 1 cut(s) 252
BfmI CTRYAG 2 cut(s) 145, 454
BfuI GTATCC 1 cut(s) 73
BmsI GCATC 1 cut(s) 449
BmtI GCTAGC 1 cut(s) 255
BpmI CTGGAG 1 cut(s) 186
Bpu10I CCTNAGC 1 cut(s) 247
BsaAI YACGTR 1 cut(s) 450
BsaWI WCCGGW 4 cut(s) 65, 91, 125, 153
BsaXI ACNNNNNCTCC 3 cut(s) 31, 197, 227
Bsc4I CCNNNNNNNGG 1 cut(s) 276
Bse1I ACTGG 1 cut(s) 169
BseGI GGATG 1 cut(s) 45
BseLI CCNNNNNNNGG 1 cut(s) 276
BseMII CTCAG 1 cut(s) 261
BseNI ACTGG 1 cut(s) 169
BseRI GAGGAG 3 cut(s) 9, 232, 235
BseYI CCCAGC 1 cut(s) 355
BsgI GTGCAG 1 cut(s) 258
BshFI GGCC 1 cut(s) 327
BsiHKAI GWGCWC 1 cut(s) 381
BsiSI CCGG 4 cut(s) 66, 92, 126, 154
BslFI GGGAC 1 cut(s) 172
BslI CCNNNNNNNGG 1 cut(s) 276
BsmFI GGGAC 1 cut(s) 172
BsnI GGCC 1 cut(s) 327
Bsp1286I GDGCHC 1 cut(s) 381
Bsp143I GATC 2 cut(s) 70, 430
BspANI GGCC 1 cut(s) 327
BspCNI CTCAG 1 cut(s) 260
BspMAI CTGCAG 1 cut(s) 458
BspOI GCTAGC 1 cut(s) 255
BspPI GGATC 1 cut(s) 65
BsrI ACTGG 1 cut(s) 169
BssMI GATC 2 cut(s) 70, 430
Bst4CI ACNGT 2 cut(s) 116, 279
Bst6I CTCTTC 1 cut(s) 398
BstBAI YACGTR 1 cut(s) 450
BstC8I GCNNGC 2 cut(s) 253, 325
BstDEI CTNAG 1 cut(s) 247
BstF5I GGATG 1 cut(s) 45
BstKTI GATC 2 cut(s) 73, 433
BstMBI GATC 2 cut(s) 70, 430
BstSFI CTRYAG 2 cut(s) 145, 454
BstSNI TACGTA 1 cut(s) 450
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 1 cut(s) 327
BtsCI GGATG 1 cut(s) 45
BtsI GCAGTG 2 cut(s) 270, 318
BtsIMutI CAGTG 2 cut(s) 270, 318
Cac8I GCNNGC 2 cut(s) 253, 325
Csp6I GTAC 4 cut(s) 25, 260, 364, 451
CviJI RGCY 9 cut(s) 120, 132, 200, 251, 255, 327, 359, 389, 446
CviKI_1 RGCY 9 cut(s) 120, 132, 200, 251, 255, 327, 359, 389, 446
CviQI GTAC 4 cut(s) 25, 260, 364, 451
DdeI CTNAG 1 cut(s) 247
DpnI GATC 2 cut(s) 72, 432
DpnII GATC 2 cut(s) 70, 430
EaeI YGGCCR 1 cut(s) 325
Eam1104I CTCTTC 1 cut(s) 398
EarI CTCTTC 1 cut(s) 398
Eco105I TACGTA 1 cut(s) 450
Eco32I GATATC 2 cut(s) 103, 172
Eco57I CTGAAG 1 cut(s) 426
EcoRV GATATC 2 cut(s) 103, 172
FaiI YATR 5 cut(s) 147, 194, 265, 301, 417
FaqI GGGAC 1 cut(s) 172
FokI GGATG 1 cut(s) 32
FspBI CTAG 1 cut(s) 252
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 1 cut(s) 186
HaeIII GGCC 1 cut(s) 327
HapII CCGG 4 cut(s) 66, 92, 126, 154
HpaII CCGG 4 cut(s) 66, 92, 126, 154
HphI GGTGA 3 cut(s) 43, 80, 97
HpyAV CCTTC 1 cut(s) 246
HpyCH4III ACNGT 2 cut(s) 116, 279
HpyCH4IV ACGT 1 cut(s) 449
HpyCH4V TGCA 2 cut(s) 275, 456
HpyF3I CTNAG 1 cut(s) 247
HpySE526I ACGT 1 cut(s) 449
Kzo9I GATC 2 cut(s) 70, 430
LmnI GCTCC 1 cut(s) 22
LweI GCATC 1 cut(s) 449
MaeI CTAG 1 cut(s) 252
MaeII ACGT 1 cut(s) 449
MaeIII GTNAC 3 cut(s) 149, 203, 287
MalI GATC 2 cut(s) 72, 432
MboI GATC 2 cut(s) 70, 430
MboII GAAGA 3 cut(s) 32, 110, 385
MhlI GDGCHC 1 cut(s) 381
MlsI TGGCCA 1 cut(s) 327
MluCI AATT 2 cut(s) 157, 293
MluNI TGGCCA 1 cut(s) 327
MnlI CCTC 8 cut(s) 30, 59, 119, 223, 250, 253, 256, 326
Mox20I TGGCCA 1 cut(s) 327
MscI TGGCCA 1 cut(s) 327
MslI CAYNNNNRTG 1 cut(s) 92
Msp20I TGGCCA 1 cut(s) 327
MspI CCGG 4 cut(s) 66, 92, 126, 154
NdeII GATC 2 cut(s) 70, 430
NheI GCTAGC 1 cut(s) 251
OliI CACNNNNGTG 1 cut(s) 92
Ppu21I YACGTR 1 cut(s) 450
PspFI CCCAGC 1 cut(s) 355
PstI CTGCAG 1 cut(s) 458
RsaI GTAC 4 cut(s) 26, 261, 365, 452
RsaNI GTAC 4 cut(s) 25, 260, 364, 451
RseI CAYNNNNRTG 1 cut(s) 92
Sau3AI GATC 2 cut(s) 70, 430
SduI GDGCHC 1 cut(s) 381
SfaNI GCATC 1 cut(s) 449
SfcI CTRYAG 2 cut(s) 145, 454
SmiMI CAYNNNNRTG 1 cut(s) 92
SnaBI TACGTA 1 cut(s) 450
Sse9I AATT 2 cut(s) 157, 293
SspMI CTAG 1 cut(s) 252
TaaI ACNGT 2 cut(s) 116, 279
TaiI ACGT 1 cut(s) 452
TaqI TCGA 2 cut(s) 375, 412
TasI AATT 2 cut(s) 157, 293
TscAI CASTG 2 cut(s) 277, 325
TspDTI ATGAA 2 cut(s) 17, 325
TspRI CASTG 2 cut(s) 277, 325
XapI RAATTY 1 cut(s) 293
XspI CTAG 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.