Rw2G048350

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
75955236 .. 75957788
2553 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G048350.1

Sequence Viewer

Length: 2553 bp
ATGAAGAACCCAACCAACAAATATCTTTGTACAGTAACTTCCATGAAACCAGTTCTTGGTCCTCTCTACCTTTCCTTGTTTCTGCACATCGTCGCCCAACTCGTGGCCGGTGATTCGCAACTTATCTACACTCCAGTTGAAGATATCACCATTGCCTGTGGCGACTCCGGCGCCCAAATCAGTAAGTTTGATAACAGAACTTGGAGAGGAGATATCAACTCAGAATTCTCCCCCTTCGAACAAGAGCAAATTGGTAACAATACATCCCAAGTCAGAAAAGCACCGTCATCGTCCTTCACAGGCAGAGTGCCGTACACCACCGCGAGGGTTTCTCACTCCAACTTCGCATACAGATTTTCGTTAACTACGGGCCAGAAGTTCATACGCTTGTATTTCCACCATGCTTCATATGCTGACTTTGACCAATCCAAAGCCCTGTTTTCGGTCGAAGCTGGTGGCTACTCCCTTCTCCAAGACTTCAATACTTCAGCCACTGTGGATGCTTCTGGGGTGGAGACGATATACAGAGAGTTCTGCCTGAACATTTACGATGTGGATCAGAGTCTAAACATCACATTCACTCCAAGCAAAGCTAAGCTGGCATATGCCTTTATCAACGGAATCGAAATTGTGTCCATGCCAACCTATCTTTACTACACTGCACCTCAGAGCGATGTCAGCTTTCCTATTGAGGAGACCACTGCTATGGAGATGGTTTACCGAATCAACATCGGTGGCAGCTCAGTCTCATCCAATCAAGACACTGGAATGTACCGCAATTGGGATGGTGAGGATGAGACCTACTTGGATGAATTAAGTAGAAATCTAACTGTTTCACTGTCCAACCCAAGCATTCAACTCAAGTTTGCCAGACTACCTCAATATAGTGCGCCGAAAGAAGTTTACCTAACAGGCCGGTTAATTGACAAGAACAAGACAAACAACAAGAGCTACAATCTCACCTGGGAATTTCCTGTAGATTCTAACCATCCCTACCTGGTTAGGCTGCATTTTTGTGAGCTTGACCCCGAAATTACCAAGATTGGAGGGCGGACTTTTCTAATTTACATAGATAATCAAGCCATAGATAAACCAGAGATAGTCGAATGGAGTGGTGGAAATGGGATACCAGTATACAGAGACTACGTGGTGGTCTTGTCTAACCCAGAAAGGCAGAAGAAAGCAAGTCTTTTTATCACACTGCAAGCATTCCAACTGGATTGGATGATTCAATACAACAATGCAATCTTGAATGGGCTTGAAATCTTGAAACTGATTGGCTCAAACGGCCCTCAAGCCCGAAGCAGCACCAACCCGAAAGTGACACCGCTAAGCCCAAGAACTTCAAAGAGTTCAAGTCCTGTGCTTGCCATCGTTCCTGGTGTAGTTTCGAGCATAGTAGTATTCTCTGCCCTTGGATTCTTGATTTTCAGGCAAAGATGGAAAGTCAAGGACTCCGGCTCCAGCCACAGGACAATGAAGTTAACAATGACCCCCAGCTCATCTTCACCGTCATATTTGTGTCGCTACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAGAACTTCAATCATACTTTCATTATTGGTGTTGGAGGATTCGGCAACGTGTACAAAGGATGCATTGATGGCGGAGCCACTCTCGTTGCAATTAAACGACTGAAACCTGAGTCATCCCAGGGTGCCCATGAGTTCAAGACAGAAATTGAGTTGCTCTCCCAACTTCGTCATCGCCATTTGGTTTCACTTATTGGATACTGTACTGATAAAGGTGAGATGATCTTGGTATATGATTACATTGCCCGTGGATCCCTCCGTGATCATCTCTACCACACCAATAACTCCACTCTTTCTTGGGAACAACGGCTTCAGATTTGTATTGGCACGGCTCAAGGGCTGCAGTACCTTCATGGCGGTGCCAAGGGAACCATCATTCACCGTGACGTGAAGAGCACAAACATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCGGATTTTGGGTTGTCAAAAATGGGGAGCCCCAACATGTCCAAGACCCACATAAGCACGGTAGTGAAGGGCAGCTTCGGTTATCTAGACCCTGAATACTACCGACGACAAAGATTAACTGAGAAGTCCGATGTGTACTCATTTGGTGTGGTTTTGTTTGAGGTACTATGTGCAAAGCCAGCCGTGATAAAGACAGAGGAGATGAGGCAAATGAACTTATCTGAGTGGGCCAAAAGCTGTCATCATAAGGGGGAACTTGATCGAATCATCGACCCAAGCTTAACGGGTAACATTGCAACCGAGAGCTTGAATAAATTTGTTGATATTGCAATGAGCTGTGTGCATGAAAATGGTGTTGAGAGGCCGTCGATGGATGATGTTCTCAGGGGGCTTGAGCTTGCGTTGCAGATTCATCATAGCCAAGAGAGTGATATCAACTCCATTGAAAGGAAGGTAGAAACTGAAACAAGTAGTGGAGAACCAAGTTGTGCGACCAAAGATTCCATTACATGTATATCTGGGACAATCTTCTCTGAGATCAACCATCCTAGTGGGAGATGA

Protein Analysis

850

Amino Acids

94.95

Weight (kDa)

6.9

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 88 - 424 3.9e-26 Malectin-like domain
Malectin PF11721 239 - 385 7.1e-08 Malectin domain
Pkinase PF00069 528 - 792 1.7e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 529 - 793 3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 170, 1682, 1916
AccB7I CCANNNNNTGG 2 cut(s) 56, 103
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 1 cut(s) 323
AciI CCGC 7 cut(s) 321, 775, 1051, 1328, 1554, 1632, 1914
AclWI GGATC 3 cut(s) 564, 1803, 1816
AcoI YGGCCR 2 cut(s) 105, 1983
AcsI RAATTY 3 cut(s) 224, 968, 2306
AcuI CTGAAG 2 cut(s) 471, 1853
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 8 cut(s) 31, 314, 773, 1613, 1762, 1904, 2129, 2157
AfiI CCNNNNNNNGG 7 cut(s) 56, 103, 324, 442, 781, 1470, 2439
AflIII ACRYGT 3 cut(s) 1608, 2028, 2501
AjiI CACGTC 1 cut(s) 1945
AjnI CCWGG 4 cut(s) 962, 996, 1378, 1677
AleI CACNNNNGTG 1 cut(s) 2054
Alw21I GWGCWC 1 cut(s) 1955
Alw26I GTCTC 5 cut(s) 509, 689, 751, 791, 1134
AlwI GGATC 3 cut(s) 564, 1803, 1816
AlwNI CAGNNNCTG 1 cut(s) 494
AoxI GGCC 7 cut(s) 105, 370, 913, 1288, 1983, 2220, 2354
ApeKI GCWGC 5 cut(s) 738, 1006, 1305, 1897, 2064
ApoI RAATTY 3 cut(s) 224, 968, 2306
AspLEI GCGC 2 cut(s) 173, 892
AspS9I GGNCC 4 cut(s) 59, 370, 1289, 2220
AsuHPI GGTGA 7 cut(s) 122, 139, 800, 952, 1500, 1784, 1928
AsuII TTCGAA 1 cut(s) 237
AvaII GGWCC 1 cut(s) 59
BaeGI GKGCMC 1 cut(s) 1687
BalI TGGCCA 1 cut(s) 1985
BamHI GGATCC 1 cut(s) 1808
BanI GGYRCC 3 cut(s) 170, 1682, 1916
BanII GRGCYC 1 cut(s) 2024
BarI GAAGNNNNNNTAC 2 cut(s) 22, 54
BauI CACGAG 1 cut(s) 101
Bbv12I GWGCWC 1 cut(s) 1955
BbvI GCAGC 5 cut(s) 750, 993, 1317, 1884, 2076
BccI CCATC 9 cut(s) 706, 779, 996, 1379, 1434, 1622, 1937, 2356, 2544
BceAI ACGGC 6 cut(s) 295, 1303, 1880, 1902, 2159, 2341
BcgI CGANNNNNNTGC 2 cut(s) 270, 304
BciT130I CCWGG 4 cut(s) 964, 998, 1380, 1679
BciVI GTATCC 2 cut(s) 1119, 1748
BclI TGATCA 1 cut(s) 1819
BcoDI GTCTC 5 cut(s) 509, 689, 751, 791, 1134
BfaI CTAG 2 cut(s) 2078, 2541
BfmI CTRYAG 2 cut(s) 975, 1898
BfoI RGCGCY 1 cut(s) 174
BfuI GTATCC 2 cut(s) 1119, 1748
BisI GCNGC 6 cut(s) 739, 1007, 1306, 1554, 1898, 2065
BlpI GCTNAGC 2 cut(s) 594, 1331
BlsI GCNGC 6 cut(s) 740, 1008, 1307, 1555, 1899, 2066
Bme1390I CCNGG 4 cut(s) 964, 998, 1380, 1679
Bme18I GGWCC 1 cut(s) 59
BmgBI CACGTC 1 cut(s) 1945
BmgT120I GGNCC 4 cut(s) 59, 370, 1289, 2220
BmiI GGNNCC 8 cut(s) 172, 1462, 1636, 1684, 1810, 1918, 1927, 2021
BmrFI CCNGG 4 cut(s) 964, 998, 1380, 1679
BmsI GCATC 2 cut(s) 490, 1610
BplI GAGNNNNNCTC 6 cut(s) 316, 348, 1626, 1658, 1700, 1732
BpmI CTGGAG 2 cut(s) 117, 1447
Bpu1102I GCTNAGC 2 cut(s) 594, 1331
Bpu14I TTCGAA 1 cut(s) 237
BpuEI CTTGAG 4 cut(s) 845, 1278, 1875, 2405
BsaAI YACGTR 1 cut(s) 1147
BsaBI GATNNNNATC 1 cut(s) 555
BsaHI GRCGYC 1 cut(s) 171
BsaI GGTCTC 2 cut(s) 689, 791
BsaJI CCNNGG 7 cut(s) 963, 1414, 1677, 1678, 1804, 1920, 1986
BsaXI ACNNNNNCTCC 4 cut(s) 565, 595, 1445, 1475
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 103, 324, 442, 781, 1470, 2439
Bse118I RCCGGY 2 cut(s) 107, 915
Bse1I ACTGG 6 cut(s) 50, 134, 769, 1130, 1221, 1542
Bse3DI GCAATG 4 cut(s) 150, 1797, 2283, 2328
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 4 cut(s) 964, 998, 1380, 1679
BseDI CCNNGG 7 cut(s) 963, 1414, 1677, 1678, 1804, 1920, 1986
BseJI GATNNNNATC 1 cut(s) 555
BseLI CCNNNNNNNGG 7 cut(s) 56, 103, 324, 442, 781, 1470, 2439
BseMI GCAATG 4 cut(s) 150, 1797, 2283, 2328
BseMII CTCAG 8 cut(s) 234, 680, 756, 1659, 2103, 2205, 2389, 2517
BseNI ACTGG 6 cut(s) 50, 134, 769, 1130, 1221, 1542
BseRI GAGGAG 3 cut(s) 222, 707, 2204
BseSI GKGCMC 1 cut(s) 1687
BseXI GCAGC 5 cut(s) 750, 993, 1317, 1884, 2076
BseYI CCCAGC 1 cut(s) 1496
BsgI GTGCAG 2 cut(s) 68, 645
Bsh1236I CGCG 1 cut(s) 323
Bsh1285I CGRYCG 1 cut(s) 447
BshFI GGCC 7 cut(s) 107, 372, 915, 1290, 1985, 2222, 2356
BshNI GGYRCC 3 cut(s) 170, 1682, 1916
BsiEI CGRYCG 1 cut(s) 447
BsiHKAI GWGCWC 1 cut(s) 1955
BsiSI CCGG 4 cut(s) 108, 168, 916, 1458
BslFI GGGAC 1 cut(s) 2527
BslI CCNNNNNNNGG 7 cut(s) 56, 103, 324, 442, 781, 1470, 2439
BsmAI GTCTC 5 cut(s) 509, 689, 751, 791, 1134
BsmBI CGTCTC 1 cut(s) 509
BsmFI GGGAC 1 cut(s) 2527
BsmI GAATGC 2 cut(s) 852, 1208
BsnI GGCC 7 cut(s) 107, 372, 915, 1290, 1985, 2222, 2356
Bso31I GGTCTC 2 cut(s) 689, 791
Bsp119I TTCGAA 1 cut(s) 237
Bsp1286I GDGCHC 3 cut(s) 1687, 1955, 2024
Bsp1407I TGTACA 2 cut(s) 29, 1611
Bsp143I GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
Bsp1720I GCTNAGC 2 cut(s) 594, 1331
BspACI CCGC 7 cut(s) 321, 775, 1051, 1328, 1554, 1632, 1914
BspANI GGCC 7 cut(s) 107, 372, 915, 1290, 1985, 2222, 2356
BspCNI CTCAG 8 cut(s) 233, 679, 755, 1660, 2104, 2206, 2388, 2518
BspFNI CGCG 1 cut(s) 323
BspLI GGNNCC 8 cut(s) 172, 1462, 1636, 1684, 1810, 1918, 1927, 2021
BspMAI CTGCAG 1 cut(s) 1902
BspPI GGATC 3 cut(s) 564, 1803, 1816
BspQI GCTCTTC 1 cut(s) 1943
BspT104I TTCGAA 1 cut(s) 237
BspT107I GGYRCC 3 cut(s) 170, 1682, 1916
BspTNI GGTCTC 2 cut(s) 689, 791
BsrDI GCAATG 4 cut(s) 150, 1797, 2283, 2328
BsrFI RCCGGY 2 cut(s) 107, 915
BsrGI TGTACA 2 cut(s) 29, 1611
BsrI ACTGG 6 cut(s) 50, 134, 769, 1130, 1221, 1542
BssAI RCCGGY 2 cut(s) 107, 915
BssECI CCNNGG 7 cut(s) 963, 1414, 1677, 1678, 1804, 1920, 1986
BssMI GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
BssNAI GTATAC 1 cut(s) 1135
BssNI GRCGYC 1 cut(s) 171
BssSI CACGAG 1 cut(s) 101
BssT1I CCWWGG 3 cut(s) 1414, 1920, 1986
Bst1107I GTATAC 1 cut(s) 1135
Bst2BI CACGAG 1 cut(s) 101
Bst2UI CCWGG 4 cut(s) 964, 998, 1380, 1679
Bst4CI ACNGT 9 cut(s) 34, 285, 496, 832, 840, 1512, 1760, 1940, 2053
Bst6I CTCTTC 1 cut(s) 1943
BstACI GRCGYC 1 cut(s) 171
BstAUI TGTACA 2 cut(s) 29, 1611
BstBAI YACGTR 1 cut(s) 1147
BstBI TTCGAA 1 cut(s) 237
BstC8I GCNNGC 5 cut(s) 600, 1206, 1368, 2172, 2391
BstDSI CCRYGG 1 cut(s) 1804
BstFNI CGCG 1 cut(s) 323
BstH2I RGCGCY 1 cut(s) 174
BstHHI GCGC 2 cut(s) 173, 892
BstKTI GATC 7 cut(s) 559, 1548, 1782, 1811, 1822, 2254, 2532
BstMAI GTCTC 5 cut(s) 509, 689, 751, 791, 1134
BstMBI GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
BstMCI CGRYCG 1 cut(s) 447
BstMWI GCNNNNNNNGC 8 cut(s) 168, 410, 599, 678, 1287, 1629, 2171, 2395
BstNI CCWGG 4 cut(s) 964, 998, 1380, 1679
BstNSI RCATGY 2 cut(s) 2032, 2505
BstSCI CCNGG 4 cut(s) 962, 996, 1378, 1677
BstSFI CTRYAG 2 cut(s) 975, 1898
BstSLI GKGCMC 1 cut(s) 1687
BstUI CGCG 1 cut(s) 323
BstV1I GCAGC 5 cut(s) 750, 993, 1317, 1884, 2076
BstX2I RGATCY 1 cut(s) 1808
BstXI CCANNNNNNTGG 2 cut(s) 706, 2543
BstYI RGATCY 1 cut(s) 1808
BstZ17I GTATAC 1 cut(s) 1135
BsuI GTATCC 2 cut(s) 1119, 1748
BsuRI GGCC 7 cut(s) 107, 372, 915, 1290, 1985, 2222, 2356
BtgI CCRYGG 1 cut(s) 1804
BtgZI GCGATG 2 cut(s) 687, 1715
BtrI CACGTC 1 cut(s) 1945
BtsI GCAGTG 3 cut(s) 657, 699, 1199
BtsIMutI CAGTG 7 cut(s) 492, 657, 699, 762, 836, 1199, 1535
Cac8I GCNNGC 5 cut(s) 600, 1206, 1368, 2172, 2391
CaiI CAGNNNCTG 1 cut(s) 494
CfoI GCGC 2 cut(s) 173, 892
Cfr10I RCCGGY 2 cut(s) 107, 915
Cfr13I GGNCC 4 cut(s) 59, 370, 1289, 2220
CsiI ACCWGGT 1 cut(s) 996
Csp6I GTAC 8 cut(s) 30, 313, 772, 1612, 1761, 1903, 2128, 2156
CspCI CAANNNNNGTGG 4 cut(s) 715, 750, 1627, 1662
CviAII CATG 8 cut(s) 43, 401, 637, 1688, 1910, 2029, 2336, 2502
CviQI GTAC 8 cut(s) 30, 313, 772, 1612, 1761, 1903, 2128, 2156
DinI GGCGCC 1 cut(s) 172
DpnI GATC 7 cut(s) 558, 1547, 1781, 1810, 1821, 2253, 2531
DpnII GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
EaeI YGGCCR 2 cut(s) 105, 1983
Eam1104I CTCTTC 1 cut(s) 1943
EarI CTCTTC 1 cut(s) 1943
EciI GGCGGA 2 cut(s) 1066, 1647
Eco130I CCWWGG 3 cut(s) 1414, 1920, 1986
Eco24I GRGCYC 1 cut(s) 2024
Eco31I GGTCTC 2 cut(s) 689, 791
Eco32I GATATC 3 cut(s) 145, 214, 2425
Eco47I GGWCC 1 cut(s) 59
Eco57I CTGAAG 2 cut(s) 471, 1853
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 4 cut(s) 962, 996, 1378, 1677
EcoRV GATATC 3 cut(s) 145, 214, 2425
EcoT14I CCWWGG 3 cut(s) 1414, 1920, 1986
EcoT22I ATGCAT 1 cut(s) 1625
EcoT38I GRGCYC 1 cut(s) 2024
EgeI GGCGCC 1 cut(s) 172
EheI GGCGCC 1 cut(s) 172
ErhI CCWWGG 3 cut(s) 1414, 1920, 1986
Esp3I CGTCTC 1 cut(s) 509
FaeI CATG 8 cut(s) 46, 404, 640, 1691, 1913, 2032, 2339, 2505
FalI AAGNNNNNCTT 4 cut(s) 1173, 1205, 2051, 2083
FaqI GGGAC 1 cut(s) 2527
FatI CATG 8 cut(s) 42, 400, 636, 1687, 1909, 2028, 2335, 2501
FauNDI CATATG 2 cut(s) 409, 604
FbaI TGATCA 1 cut(s) 1819
FblI GTMKAC 1 cut(s) 1134
Fnu4HI GCNGC 6 cut(s) 739, 1007, 1306, 1554, 1898, 2065
FriOI GRGCYC 1 cut(s) 2024
Fsp4HI GCNGC 6 cut(s) 739, 1007, 1306, 1554, 1898, 2065
FspBI CTAG 2 cut(s) 2078, 2541
GlaI GCGC 2 cut(s) 172, 891
GluI GCNGC 6 cut(s) 739, 1007, 1306, 1554, 1898, 2065
GsaI CCCAGC 1 cut(s) 1500
GsuI CTGGAG 2 cut(s) 117, 1447
HaeII RGCGCY 1 cut(s) 174
HaeIII GGCC 7 cut(s) 107, 372, 915, 1290, 1985, 2222, 2356
HapII CCGG 4 cut(s) 108, 168, 916, 1458
HhaI GCGC 2 cut(s) 173, 892
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 8 cut(s) 46, 404, 640, 1691, 1913, 2032, 2339, 2505
Hin6I GCGC 2 cut(s) 171, 890
HinP1I GCGC 2 cut(s) 171, 890
HincII GTYRAC 2 cut(s) 363, 1485
HindII GTYRAC 2 cut(s) 363, 1485
HindIII AAGCTT 1 cut(s) 2269
HpaI GTTAAC 2 cut(s) 363, 1485
HpaII CCGG 4 cut(s) 108, 168, 916, 1458
HphI GGTGA 7 cut(s) 122, 139, 800, 952, 1500, 1784, 1928
Hpy166II GTNNAC 8 cut(s) 315, 363, 718, 904, 1135, 1485, 1612, 2128
Hpy188I TCNGA 9 cut(s) 223, 275, 561, 669, 1872, 1996, 2122, 2215, 2527
Hpy188III TCNNGA 6 cut(s) 758, 1249, 1267, 1423, 1696, 2078
Hpy8I GTNNAC 8 cut(s) 315, 363, 718, 904, 1135, 1485, 1612, 2128
Hpy99I CGWCG 3 cut(s) 95, 2100, 2362
HpyAV CCTTC 6 cut(s) 244, 304, 476, 1916, 2053, 2437
HpyCH4III ACNGT 9 cut(s) 34, 285, 496, 832, 840, 1512, 1760, 1940, 2053
HpyCH4IV ACGT 3 cut(s) 1146, 1608, 1944
HpyF10VI GCNNNNNNNGC 8 cut(s) 168, 410, 599, 678, 1287, 1629, 2171, 2395
HpySE526I ACGT 3 cut(s) 1146, 1608, 1944
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 8 cut(s) 46, 404, 640, 1691, 1913, 2032, 2339, 2505
HspAI GCGC 2 cut(s) 171, 890
KasI GGCGCC 1 cut(s) 170
Ksp22I TGATCA 1 cut(s) 1819
KspAI GTTAAC 2 cut(s) 363, 1485
Kzo9I GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
LguI GCTCTTC 1 cut(s) 1943
LmnI GCTCC 3 cut(s) 1466, 1634, 2019
Lsp1109I GCAGC 5 cut(s) 750, 993, 1317, 1884, 2076
LweI GCATC 2 cut(s) 490, 1610
MabI ACCWGGT 1 cut(s) 996
MaeI CTAG 2 cut(s) 2078, 2541
MaeII ACGT 3 cut(s) 1146, 1608, 1944
MaeIII GTNAC 5 cut(s) 34, 254, 1321, 1940, 2279
MalI GATC 7 cut(s) 558, 1547, 1781, 1810, 1821, 2253, 2531
MboI GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
MboII GAAGA 6 cut(s) 16, 152, 1189, 1497, 1960, 2512
MfeI CAATTG 1 cut(s) 778
MflI RGATCY 1 cut(s) 1808
MhlI GDGCHC 3 cut(s) 1687, 1955, 2024
MlsI TGGCCA 1 cut(s) 1985
MluNI TGGCCA 1 cut(s) 1985
Mly113I GGCGCC 1 cut(s) 171
MlyI GAGTC 4 cut(s) 158, 571, 1448, 1679
MmeI TCCRAC 4 cut(s) 363, 867, 1237, 1573
Mox20I TGGCCA 1 cut(s) 1985
Mph1103I ATGCAT 1 cut(s) 1625
MscI TGGCCA 1 cut(s) 1985
MseI TTAA 7 cut(s) 362, 815, 920, 1484, 1653, 2108, 2273
MslI CAYNNNNRTG 8 cut(s) 704, 767, 1014, 1519, 1914, 2054, 2340, 2541
Msp20I TGGCCA 1 cut(s) 1985
MspI CCGG 4 cut(s) 108, 168, 916, 1458
MspR9I CCNGG 4 cut(s) 964, 998, 1380, 1679
MunI CAATTG 1 cut(s) 778
Mva1269I GAATGC 2 cut(s) 852, 1208
MvaI CCWGG 4 cut(s) 964, 998, 1380, 1679
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 8 cut(s) 168, 410, 599, 678, 1287, 1629, 2171, 2395
NarI GGCGCC 1 cut(s) 171
NdeI CATATG 2 cut(s) 409, 604
NdeII GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
NlaIII CATG 8 cut(s) 46, 404, 640, 1691, 1913, 2032, 2339, 2505
NlaIV GGNNCC 8 cut(s) 172, 1462, 1636, 1684, 1810, 1918, 1927, 2021
NmuCI GTSAC 2 cut(s) 1321, 1940
NsiI ATGCAT 1 cut(s) 1625
NspI RCATGY 2 cut(s) 2032, 2505
NspV TTCGAA 1 cut(s) 237
OliI CACNNNNGTG 1 cut(s) 2054
PasI CCCWGGG 1 cut(s) 1678
PciI ACATGT 2 cut(s) 2028, 2501
PciSI GCTCTTC 1 cut(s) 1943
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 2 cut(s) 852, 1208
PflMI CCANNNNNTGG 2 cut(s) 56, 103
PkrI GCNGC 6 cut(s) 740, 1008, 1307, 1555, 1899, 2066
PleI GAGTC 4 cut(s) 158, 570, 1448, 1678
PluTI GGCGCC 1 cut(s) 174
PpsI GAGTC 4 cut(s) 158, 570, 1448, 1678
Ppu21I YACGTR 1 cut(s) 1147
PscI ACATGT 2 cut(s) 2028, 2501
Psp6I CCWGG 4 cut(s) 962, 996, 1378, 1677
PspFI CCCAGC 1 cut(s) 1496
PspGI CCWGG 4 cut(s) 962, 996, 1378, 1677
PspN4I GGNNCC 8 cut(s) 172, 1462, 1636, 1684, 1810, 1918, 1927, 2021
PspPI GGNCC 4 cut(s) 59, 370, 1289, 2220
PstI CTGCAG 1 cut(s) 1902
PstNI CAGNNNCTG 1 cut(s) 494
PsuI RGATCY 1 cut(s) 1808
RsaI GTAC 8 cut(s) 31, 314, 773, 1613, 1762, 1904, 2129, 2157
RsaNI GTAC 8 cut(s) 30, 313, 772, 1612, 1761, 1903, 2128, 2156
RseI CAYNNNNRTG 8 cut(s) 704, 767, 1014, 1519, 1914, 2054, 2340, 2541
SapI GCTCTTC 1 cut(s) 1943
SaqAI TTAA 7 cut(s) 362, 815, 920, 1484, 1653, 2108, 2273
SatI GCNGC 6 cut(s) 739, 1007, 1306, 1554, 1898, 2065
Sau3AI GATC 7 cut(s) 556, 1545, 1779, 1808, 1819, 2251, 2529
Sau96I GGNCC 4 cut(s) 59, 370, 1289, 2220
SchI GAGTC 4 cut(s) 158, 571, 1448, 1679
ScrFI CCNGG 4 cut(s) 964, 998, 1380, 1679
SduI GDGCHC 3 cut(s) 1687, 1955, 2024
SexAI ACCWGGT 1 cut(s) 996
SfaNI GCATC 2 cut(s) 490, 1610
SfcI CTRYAG 2 cut(s) 975, 1898
SfoI GGCGCC 1 cut(s) 172
SfuI TTCGAA 1 cut(s) 237
SinI GGWCC 1 cut(s) 59
SmiMI CAYNNNNRTG 8 cut(s) 704, 767, 1014, 1519, 1914, 2054, 2340, 2541
SmlI CTYRAG 4 cut(s) 860, 1293, 1890, 2384
SmoI CTYRAG 4 cut(s) 860, 1293, 1890, 2384
SsiI CCGC 7 cut(s) 321, 775, 1051, 1328, 1554, 1632, 1914
SspDI GGCGCC 1 cut(s) 170
SspMI CTAG 2 cut(s) 2078, 2541
StyD4I CCNGG 4 cut(s) 962, 996, 1378, 1677
StyI CCWWGG 3 cut(s) 1414, 1920, 1986
TaaI ACNGT 9 cut(s) 34, 285, 496, 832, 840, 1512, 1760, 1940, 2053
TaiI ACGT 3 cut(s) 1149, 1611, 1947
TaqI TCGA 8 cut(s) 237, 447, 624, 1104, 1391, 2254, 2262, 2360
TaqII GACCGA 1 cut(s) 433
TatI WGTACW 4 cut(s) 29, 1611, 1760, 2127
TauI GCSGC 1 cut(s) 1556
Tru1I TTAA 7 cut(s) 362, 815, 920, 1484, 1653, 2108, 2273
Tru9I TTAA 7 cut(s) 362, 815, 920, 1484, 1653, 2108, 2273
TscAI CASTG 7 cut(s) 499, 664, 706, 769, 843, 1206, 1542
TseFI GTSAC 2 cut(s) 1321, 1940
TseI GCWGC 5 cut(s) 738, 1006, 1305, 1897, 2064
Tsp45I GTSAC 2 cut(s) 1321, 1940
TspGWI ACGGA 2 cut(s) 633, 1805
TspRI CASTG 7 cut(s) 499, 664, 706, 769, 843, 1206, 1542
Van91I CCANNNNNTGG 2 cut(s) 56, 103
VpaK11BI GGWCC 1 cut(s) 59
XapI RAATTY 3 cut(s) 224, 968, 2306
XbaI TCTAGA 1 cut(s) 2077
XceI RCATGY 2 cut(s) 2032, 2505
XmiI GTMKAC 1 cut(s) 1134
XspI CTAG 2 cut(s) 2078, 2541
Zsp2I ATGCAT 1 cut(s) 1625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.