Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

80385881 .. 80387105

Gene Structure 1225 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53338

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGAATAGTGCAGGAGCTTTAGTTCCAGCATACTTGTGTTTCTCTGTCCTCGGATACTTGGTTTTCAGAAAAAGATGGAAAGTCAAGGACTCTGGCTCCAGCAAGAGGAGAATAAAGTTTACAACAACCCCCGGGTCCTCTTATCCGTATAACTTCTTTTCATTGGCAGAGATCAAGGCCGCCACCAAAAACTTCAATGATGCTTTTATCATTGGAGCTGGAGGATTTGGTAATGTATACAAAGGATGCATTGATGGTGGAGCCACTCCAGTTGCAATCAAATGGCTGAAACCAGAATCATCCCAAGGTGTCCATGAGTTGGAGACTGAAATTGAGATGCTCTCCCAACTTCGTCATCGCCATTTGGTTTCACTCTTTGGATATTGTACTGATAAAGGTGAGATGATCTTAGTGTATGATTACATGGCACAAGGAACCCTCCGTGACCATCTCTACCACACTAATAACCCACCTCTTCCCTGGGAACAACGGCTTCAGATTTGTATTGGTGCAGCTCGAGGGTTGCAGTATCTTCATAGTGGTGCAAAGGGCACCATCATTCACCGAGATGTGAAGAGCACAAACATCTTATTGGATGACAAATGGGTGGCCAAGGTTTCAGATTTCGGGCTGTCCAAAGGCACAACAAACATGTCCAAAACCCACATCAGCACGATTGTGAAAGGGAGTTTCGGGTATCTGGATCCAGAATACTACAGACGACAACGTCTGACTGAGAAGTCAGACGTCTACTCATTTGGTGTAGTTCTGTGTGAGGTATTGTGTGCAAGGCCAGCACTAATACATACAGAGAAAACAGAATTACACCAAGTGAATCTGGCCGAGTGGACCAAGAGCTGTCATCAGAATGGAGAACTTGATCAAATCATTGATGCAAGTTTGAGAGGTAAGATTGCAGCCGAGTGCTTGAATATATTCGCTGAGGTAGCAAGCAGTTGCATGCATGACGATGGGACCAAACGGCCGTCCATGAATGATGTTGTAAGAGGGCTTGAGCTTGCATTGGACCTTCAACGAAACACAGAGGGGAACATCAAGTGCACTGAAAAGATCGGTGAAACTGAAACAAGCAGTAGTGAGCAAAGTTCTACAGCCAACAATTCCATTGTATGCATATCTGGGACAATCTTCTCTGAGGTCACCAATCCGAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

393

Amino Acids

43.54

Weight (kDa)

7.95

Isoelectric Point (pI)

46.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	70 - 335	1.9e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	71 - 337	5.7e-51	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	726, 739
AatII	GACGTC	1 cut(s)	750
AccB1I	GGYRCC	1 cut(s)	551
AccB7I	CCANNNNNTGG	1 cut(s)	319
AccI	GTMKAC	2 cut(s)	237, 750
AciI	CCGC	1 cut(s)	180
AclWI	GGATC	2 cut(s)	698, 711
AcoI	YGGCCR	3 cut(s)	609, 840, 983
AcuI	CTGAAG	1 cut(s)	479
AcyI	GRCGYC	1 cut(s)	747
AdeI	CACNNNGTG	1 cut(s)	832
AfaI	GTAC	1 cut(s)	388
AfiI	CCNNNNNNNGG	2 cut(s)	105, 319
AflIII	ACRYGT	1 cut(s)	651
AgsI	TTSAA	3 cut(s)	196, 931, 1034
AjnI	CCWGG	1 cut(s)	479
AleI	CACNNNNGTG	1 cut(s)	677
AloI	GAACNNNNNNTCC	1 cut(s)	38
AluBI	AGCT	5 cut(s)	17, 218, 515, 858, 1018
AluI	AGCT	5 cut(s)	17, 218, 515, 858, 1018
Alw21I	GWGCWC	2 cut(s)	581, 1064
Alw26I	GTCTC	1 cut(s)	317
Alw44I	GTGCAC	1 cut(s)	1060
AlwI	GGATC	2 cut(s)	698, 711
Ama87I	CYCGRG	2 cut(s)	131, 516
AoxI	GGCC	5 cut(s)	177, 609, 791, 840, 983
ApaLI	GTGCAC	1 cut(s)	1060
ApeKI	GCWGC	2 cut(s)	512, 917
Asp700I	GAANNNNTTC	1 cut(s)	935
AspS9I	GGNCC	4 cut(s)	135, 849, 975, 1027
AsuC2I	CCSGG	2 cut(s)	132, 133
AsuHPI	GGTGA	4 cut(s)	410, 554, 1088, 1153
AvaI	CYCGRG	2 cut(s)	131, 516
AvaII	GGWCC	4 cut(s)	135, 849, 975, 1027
BaeGI	GKGCMC	2 cut(s)	554, 1064
BalI	TGGCCA	1 cut(s)	611
BamHI	GGATCC	1 cut(s)	703
BanI	GGYRCC	1 cut(s)	551
Bbv12I	GWGCWC	2 cut(s)	581, 1064
BbvCI	CCTCAGC	1 cut(s)	942
BbvI	GCAGC	2 cut(s)	524, 929
BccI	CCATC	5 cut(s)	69, 248, 456, 563, 965
BceAI	ACGGC	3 cut(s)	506, 970, 998
BciT130I	CCWGG	1 cut(s)	481
BciVI	GTATCC	1 cut(s)	47
BclI	TGATCA	1 cut(s)	880
BcnI	CCSGG	2 cut(s)	132, 133
BcoDI	GTCTC	1 cut(s)	317
BfmI	CTRYAG	2 cut(s)	715, 1110
BfuI	GTATCC	1 cut(s)	47
BisI	GCNGC	3 cut(s)	180, 513, 918
BlsI	GCNGC	3 cut(s)	181, 514, 919
Bme1390I	CCNGG	3 cut(s)	132, 133, 481
Bme18I	GGWCC	4 cut(s)	135, 849, 975, 1027
BmeT110I	CYCGRG	2 cut(s)	131, 516
BmgT120I	GGNCC	4 cut(s)	135, 849, 975, 1027
BmiI	GGNNCC	7 cut(s)	97, 136, 262, 436, 553, 705, 976
BmrFI	CCNGG	3 cut(s)	132, 133, 481
BmsI	GCATC	4 cut(s)	190, 236, 327, 883
BplI	GAGNNNNNCTC	2 cut(s)	326, 358
BpmI	CTGGAG	3 cut(s)	82, 240, 252
Bpu10I	CCTNAGC	1 cut(s)	942
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	2 cut(s)	132, 133
BsaHI	GRCGYC	1 cut(s)	747
BsaJI	CCNNGG	7 cut(s)	49, 130, 131, 304, 479, 480, 612
BsaXI	ACNNNNNCTCC	4 cut(s)	6, 36, 80, 110
Bsc4I	CCNNNNNNNGG	2 cut(s)	105, 319
Bse1I	ACTGG	1 cut(s)	269
BseBI	CCWGG	1 cut(s)	481
BseDI	CCNNGG	7 cut(s)	49, 130, 131, 304, 479, 480, 612
BseGI	GGATG	3 cut(s)	251, 299, 601
BseLI	CCNNNNNNNGG	2 cut(s)	105, 319
BseMII	CTCAG	3 cut(s)	726, 933, 1146
BseNI	ACTGG	1 cut(s)	269
BseRI	GAGGAG	1 cut(s)	121
BseSI	GKGCMC	2 cut(s)	554, 1064
BseX3I	CGGCCG	1 cut(s)	983
BseXI	GCAGC	2 cut(s)	524, 929
BsgI	GTGCAG	2 cut(s)	30, 531
Bsh1285I	CGRYCG	1 cut(s)	986
BshFI	GGCC	5 cut(s)	179, 611, 793, 842, 985
BshNI	GGYRCC	1 cut(s)	551
BsiEI	CGRYCG	1 cut(s)	986
BsiHKAI	GWGCWC	2 cut(s)	581, 1064
BsiHKCI	CYCGRG	2 cut(s)	131, 516
BsiSI	CCGG	1 cut(s)	132
BslFI	GGGAC	2 cut(s)	988, 1156
BslI	CCNNNNNNNGG	2 cut(s)	105, 319
BsmAI	GTCTC	1 cut(s)	317
BsmFI	GGGAC	2 cut(s)	988, 1156
BsnI	GGCC	5 cut(s)	179, 611, 793, 842, 985
BsoBI	CYCGRG	2 cut(s)	131, 516
Bsp1286I	GDGCHC	3 cut(s)	554, 581, 1064
Bsp143I	GATC	5 cut(s)	171, 405, 703, 880, 1071
BspACI	CCGC	1 cut(s)	180
BspANI	GGCC	5 cut(s)	179, 611, 793, 842, 985
BspCNI	CTCAG	3 cut(s)	727, 934, 1147
BspLI	GGNNCC	7 cut(s)	97, 136, 262, 436, 553, 705, 976
BspPI	GGATC	2 cut(s)	698, 711
BspQI	GCTCTTC	1 cut(s)	569
BspT107I	GGYRCC	1 cut(s)	551
BsrI	ACTGG	1 cut(s)	269
BssECI	CCNNGG	7 cut(s)	49, 130, 131, 304, 479, 480, 612
BssMI	GATC	5 cut(s)	171, 405, 703, 880, 1071
BssNAI	GTATAC	1 cut(s)	238
BssNI	GRCGYC	1 cut(s)	747
BssT1I	CCWWGG	2 cut(s)	304, 612
Bst1107I	GTATAC	1 cut(s)	238
Bst2UI	CCWGG	1 cut(s)	481
Bst6I	CTCTTC	2 cut(s)	480, 569
BstACI	GRCGYC	1 cut(s)	747
BstC8I	GCNNGC	4 cut(s)	795, 952, 962, 1020
BstDEI	CTNAG	4 cut(s)	409, 735, 942, 1155
BstEII	GGTNACC	1 cut(s)	1159
BstF5I	GGATG	3 cut(s)	251, 299, 601
BstKTI	GATC	5 cut(s)	174, 408, 706, 883, 1074
BstMAI	GTCTC	1 cut(s)	317
BstMBI	GATC	5 cut(s)	171, 405, 703, 880, 1071
BstMCI	CGRYCG	1 cut(s)	986
BstMWI	GCNNNNNNNGC	2 cut(s)	794, 947
BstNI	CCWGG	1 cut(s)	481
BstNSI	RCATGY	2 cut(s)	655, 964
BstPI	GGTNACC	1 cut(s)	1159
BstSCI	CCNGG	3 cut(s)	130, 131, 479
BstSFI	CTRYAG	2 cut(s)	715, 1110
BstSLI	GKGCMC	2 cut(s)	554, 1064
BstV1I	GCAGC	2 cut(s)	524, 929
BstX2I	RGATCY	1 cut(s)	703
BstYI	RGATCY	1 cut(s)	703
BstZ17I	GTATAC	1 cut(s)	238
BstZI	CGGCCG	1 cut(s)	983
BsuI	GTATCC	1 cut(s)	47
BsuRI	GGCC	5 cut(s)	179, 611, 793, 842, 985
BtgZI	GCGATG	1 cut(s)	341
BtsCI	GGATG	3 cut(s)	251, 299, 601
BtsIMutI	CAGTG	1 cut(s)	1062
Cac8I	GCNNGC	4 cut(s)	795, 952, 962, 1020
Cfr13I	GGNCC	4 cut(s)	135, 849, 975, 1027
Cfr9I	CCCGGG	1 cut(s)	131
Csp6I	GTAC	1 cut(s)	387
CspCI	CAANNNNNGTGG	3 cut(s)	253, 288, 1153
CviAII	CATG	6 cut(s)	314, 424, 652, 961, 965, 991
CviQI	GTAC	1 cut(s)	387
DdeI	CTNAG	4 cut(s)	409, 735, 942, 1155
DpnI	GATC	5 cut(s)	173, 407, 705, 882, 1073
DpnII	GATC	5 cut(s)	171, 405, 703, 880, 1071
DraIII	CACNNNGTG	1 cut(s)	832
DrdI	GACNNNNNNGTC	2 cut(s)	726, 739
DseDI	GACNNNNNNGTC	2 cut(s)	726, 739
EaeI	YGGCCR	3 cut(s)	609, 840, 983
EagI	CGGCCG	1 cut(s)	983
Eam1104I	CTCTTC	2 cut(s)	480, 569
EarI	CTCTTC	2 cut(s)	480, 569
EclXI	CGGCCG	1 cut(s)	983
Eco130I	CCWWGG	2 cut(s)	304, 612
Eco47I	GGWCC	4 cut(s)	135, 849, 975, 1027
Eco52I	CGGCCG	1 cut(s)	983
Eco57I	CTGAAG	1 cut(s)	479
Eco88I	CYCGRG	2 cut(s)	131, 516
Eco91I	GGTNACC	1 cut(s)	1159
EcoO109I	RGGNCCY	1 cut(s)	135
EcoO65I	GGTNACC	1 cut(s)	1159
EcoRII	CCWGG	1 cut(s)	479
EcoT14I	CCWWGG	2 cut(s)	304, 612
EcoT22I	ATGCAT	3 cut(s)	251, 966, 1136
ErhI	CCWWGG	2 cut(s)	304, 612
FaeI	CATG	6 cut(s)	317, 427, 655, 964, 968, 994
FaqI	GGGAC	2 cut(s)	988, 1156
FatI	CATG	6 cut(s)	313, 423, 651, 960, 964, 990
FbaI	TGATCA	1 cut(s)	880
FblI	GTMKAC	2 cut(s)	237, 750
Fnu4HI	GCNGC	3 cut(s)	180, 513, 918
FokI	GGATG	3 cut(s)	258, 286, 608
Fsp4HI	GCNGC	3 cut(s)	180, 513, 918
GluI	GCNGC	3 cut(s)	180, 513, 918
GsuI	CTGGAG	3 cut(s)	82, 240, 252
HaeIII	GGCC	5 cut(s)	179, 611, 793, 842, 985
HapII	CCGG	1 cut(s)	132
Hin1I	GRCGYC	1 cut(s)	747
Hin1II	CATG	6 cut(s)	317, 427, 655, 964, 968, 994
HinfI	GANTC	3 cut(s)	89, 296, 835
HpaII	CCGG	1 cut(s)	132
HphI	GGTGA	4 cut(s)	410, 554, 1088, 1153
Hpy166II	GTNNAC	5 cut(s)	120, 238, 751, 849, 1062
Hpy188I	TCNGA	9 cut(s)	53, 68, 498, 622, 732, 745, 867, 1156, 1170
Hpy188III	TCNNGA	2 cut(s)	701, 707
Hpy8I	GTNNAC	5 cut(s)	120, 238, 751, 849, 1062
HpyAV	CCTTC	1 cut(s)	1040
HpyCH4IV	ACGT	2 cut(s)	727, 747
HpyF10VI	GCNNNNNNNGC	2 cut(s)	794, 947
HpyF3I	CTNAG	4 cut(s)	409, 735, 942, 1155
HpySE526I	ACGT	2 cut(s)	727, 747
Hsp92I	GRCGYC	1 cut(s)	747
Hsp92II	CATG	6 cut(s)	317, 427, 655, 964, 968, 994
Ksp22I	TGATCA	1 cut(s)	880
Kzo9I	GATC	5 cut(s)	171, 405, 703, 880, 1071
LguI	GCTCTTC	1 cut(s)	569
LmnI	GCTCC	4 cut(s)	14, 101, 215, 260
Lsp1109I	GCAGC	2 cut(s)	524, 929
LweI	GCATC	4 cut(s)	190, 236, 327, 883
MaeII	ACGT	2 cut(s)	727, 747
MaeIII	GTNAC	2 cut(s)	443, 1159
MalI	GATC	5 cut(s)	173, 407, 705, 882, 1073
MboI	GATC	5 cut(s)	171, 405, 703, 880, 1071
MboII	GAAGA	4 cut(s)	467, 524, 586, 1141
MflI	RGATCY	1 cut(s)	703
MhlI	GDGCHC	3 cut(s)	554, 581, 1064
MlsI	TGGCCA	1 cut(s)	611
MluCI	AATT	3 cut(s)	330, 821, 1120
MluNI	TGGCCA	1 cut(s)	611
MlyI	GAGTC	1 cut(s)	83
MmeI	TCCRAC	1 cut(s)	300
Mox20I	TGGCCA	1 cut(s)	611
Mph1103I	ATGCAT	3 cut(s)	251, 966, 1136
MroXI	GAANNNNTTC	1 cut(s)	935
MscI	TGGCCA	1 cut(s)	611
MslI	CAYNNNNRTG	6 cut(s)	34, 540, 567, 677, 867, 969
Msp20I	TGGCCA	1 cut(s)	611
MspI	CCGG	1 cut(s)	132
MspR9I	CCNGG	3 cut(s)	132, 133, 481
MvaI	CCWGG	1 cut(s)	481
MwoI	GCNNNNNNNGC	2 cut(s)	794, 947
NciI	CCSGG	2 cut(s)	132, 133
NdeII	GATC	5 cut(s)	171, 405, 703, 880, 1071
NlaIII	CATG	6 cut(s)	317, 427, 655, 964, 968, 994
NlaIV	GGNNCC	7 cut(s)	97, 136, 262, 436, 553, 705, 976
NmeAIII	GCCGAG	2 cut(s)	868, 946
NmuCI	GTSAC	2 cut(s)	443, 1159
NsiI	ATGCAT	3 cut(s)	251, 966, 1136
NspI	RCATGY	2 cut(s)	655, 964
OliI	CACNNNNGTG	1 cut(s)	677
PaeI	GCATGC	1 cut(s)	964
PaeR7I	CTCGAG	1 cut(s)	516
PasI	CCCWGGG	1 cut(s)	480
PciI	ACATGT	1 cut(s)	651
PciSI	GCTCTTC	1 cut(s)	569
PdmI	GAANNNNTTC	1 cut(s)	935
PfeI	GAWTC	2 cut(s)	296, 835
PflFI	GACNNNGTC	1 cut(s)	726
PflMI	CCANNNNNTGG	1 cut(s)	319
PkrI	GCNGC	3 cut(s)	181, 514, 919
PleI	GAGTC	1 cut(s)	83
PpsI	GAGTC	1 cut(s)	83
PpuMI	RGGWCCY	1 cut(s)	135
PscI	ACATGT	1 cut(s)	651
Psp5II	RGGWCCY	1 cut(s)	135
Psp6I	CCWGG	1 cut(s)	479
PspEI	GGTNACC	1 cut(s)	1159
PspGI	CCWGG	1 cut(s)	479
PspN4I	GGNNCC	7 cut(s)	97, 136, 262, 436, 553, 705, 976
PspPI	GGNCC	4 cut(s)	135, 849, 975, 1027
PspPPI	RGGWCCY	1 cut(s)	135
PspXI	VCTCGAGB	1 cut(s)	516
PsuI	RGATCY	1 cut(s)	703
PsyI	GACNNNGTC	1 cut(s)	726
RsaI	GTAC	1 cut(s)	388
RsaNI	GTAC	1 cut(s)	387
RseI	CAYNNNNRTG	6 cut(s)	34, 540, 567, 677, 867, 969
SapI	GCTCTTC	1 cut(s)	569
SatI	GCNGC	3 cut(s)	180, 513, 918
Sau3AI	GATC	5 cut(s)	171, 405, 703, 880, 1071
Sau96I	GGNCC	4 cut(s)	135, 849, 975, 1027
SchI	GAGTC	1 cut(s)	83
ScrFI	CCNGG	3 cut(s)	132, 133, 481
SduI	GDGCHC	3 cut(s)	554, 581, 1064
SfaNI	GCATC	4 cut(s)	190, 236, 327, 883
SfcI	CTRYAG	2 cut(s)	715, 1110
Sfr274I	CTCGAG	1 cut(s)	516
SinI	GGWCC	4 cut(s)	135, 849, 975, 1027
SlaI	CTCGAG	1 cut(s)	516
SmaI	CCCGGG	1 cut(s)	133
SmiMI	CAYNNNNRTG	6 cut(s)	34, 540, 567, 677, 867, 969
SmlI	CTYRAG	2 cut(s)	516, 1013
SmoI	CTYRAG	2 cut(s)	516, 1013
SphI	GCATGC	1 cut(s)	964
Sse9I	AATT	3 cut(s)	330, 821, 1120
SsiI	CCGC	1 cut(s)	180
StyD4I	CCNGG	3 cut(s)	130, 131, 479
StyI	CCWWGG	2 cut(s)	304, 612
TaiI	ACGT	2 cut(s)	730, 750
TaqI	TCGA	1 cut(s)	517
TasI	AATT	3 cut(s)	330, 821, 1120
TatI	WGTACW	1 cut(s)	386
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	2 cut(s)	296, 835
TscAI	CASTG	1 cut(s)	1069
TseFI	GTSAC	2 cut(s)	443, 1159
TseI	GCWGC	2 cut(s)	512, 917
Tsp45I	GTSAC	2 cut(s)	443, 1159
TspDTI	ATGAA	4 cut(s)	17, 150, 524, 1007
TspGWI	ACGGA	2 cut(s)	135, 431
TspMI	CCCGGG	1 cut(s)	131
TspRI	CASTG	1 cut(s)	1069
Tth111I	GACNNNGTC	1 cut(s)	726
Van91I	CCANNNNNTGG	1 cut(s)	319
VneI	GTGCAC	1 cut(s)	1060
VpaK11BI	GGWCC	4 cut(s)	135, 849, 975, 1027
XceI	RCATGY	2 cut(s)	655, 964
XcmI	CCANNNNNNNNNTGG	1 cut(s)	477
XhoI	CTCGAG	1 cut(s)	516
XmaI	CCCGGG	1 cut(s)	131
XmiI	GTMKAC	2 cut(s)	237, 750
XmnI	GAANNNNTTC	1 cut(s)	935
ZraI	GACGTC	1 cut(s)	748
Zsp2I	ATGCAT	3 cut(s)	251, 966, 1136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.