Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

24117454 .. 24120111

Gene Structure 2658 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G251200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGATCGTCGTCACCATATTCGTTGCCAGCGATTTGCCACCTATCTACAATGCAGTCGAAGATATCACCATCAATTGTGGCTATTCCGGCCACATATTCAATGCATATGATCAGCGAAATTGGACTGGAGATATCAACTCAACATTTTCACCCTTTGAACACCAAGCAATTGGCAACACATCCATATTCAAAGAAGCACCTCATTCGTACACCGTCCCACAAGTGCCTTACACCAGAGCTAGGCTTTCTCACTTTGAATTTACCTATAGATTTTTTAACCTCACCCCCGGCCAAAAGTTCGTCCGTCTGTATTTCTTCCCAGCTTCATACCCCGACTTTGATCCCTCCAAAGCCTTCTTCTCTGTCAAAGCCGGTGGCTTTACCCTTCTCCACGACTTCAATGCTTCAGTCACTGCTGCTGCTTCTGGGTCGGAGGAGACGGTATATAGAGAATTCTGTATGAACATTGAGGAAGAAGAAGAAGAACCTAGTTTAAGCATCACGTTCACTCCAAGCAGAGCAATCCAAGATGCCTACGCGTTTATTAACGGAATTGAAATTGTATCAATGCCCGTCAATTTATACTACACTCCACGTGGGATTCAATATGTAGGCAATGAAAACATCTTTCGCATTGAAAACAACACTGCTTTGGAGGCGGTGTACCGAATCAATGTGGGCGGTAAGGCACTCTTTTTTGGTAAAGACACTGGCATGTACCGCAATTGGAATGCTTATGGAGACGAGCAAATTCACTTGGAAGAGTTGAGTCTTAACCGTAGTGTTTTGCCGCAAAATGATAGTATCCAACTCCATTTTGCCAAAATCCCAGAGTACTCTGCTCCAAAAGAAGTTTACCAAACCGCTCGGGCAATGGGCAACGACACAGCCATAAACAAGAGCTACAACCTGACATGGCAATTTCCTGTTGATTCCAATTTCAATTACCTGGTTAGGCTTCATTTTTGTGAGTTTCAGGCTGGAATTTGGGAGATCGGAGATCAAGTGTTTCTAATTTACCTGGATAATATACCTGCTGAAAAAACAGCGGACATAATTGAGTGGAGTGGCGGGAATGGGTTTCCAATATACAGAGACTACTTGGTGTCCATGCAGCTTCCGAGCTCAACTGGAACTGGAAGCAAGGCGAAAGTGAATCTCACCATCGCACTGCAGGCAAACCCACATGATTGGAGGACTTTAATCAGCGATGCAATGTTGAATGGTCTCGAAATCTTCAAACTCAACAACTCATACGGCAATCTCGCGGGACCCAACCCCGATCCACCTCTTATGGACCCAACAAATACGACGTCGTCGTCAGGCCCAGAAAAACCCAAGTTGAGGAATACTCATTTGCTCGCTATTGTTGCTGGTGTAGTTTCCACCACAATTGCACTGCTCTCTGTTCTAGGGTTATTCTTGGCTTTCAGGCGACGACAGAAACTCAAGGACTATGATGGTTGCTCCACCCGCGGAGCAACCAACTCAACCAAAAGTCGGGGCTCATCCTTACCGTCCAATTTGTGTCACTACTTTTCCTTGGCGGAGATCAAAGACGCCACCCGAAACTTCAGCGAAATTTGTATTATTGGGCGTGGCGGGTTCGGTAACGTTTACAAAGGGTACCTCGATGGTGCGGCCACCCCCGTTGCGATCAAACGGCTGAAACCCGAGTCATCACAGGGGGCCCACGAATTCAAGACGGAGATCGAGATGCTCTCCCACTTACGGCACCGTCATTTGGTATCGCTGATTGGATATTGTGCAGATGAAGGTGAGATGATCTTAGTGTATGACTTCATGGATCGTGGGGCTCTCAGCGACTATCTCTACCACAAAGATAACCCATCTCTTCCCTGGGAACAACGACTTGAGATCTGTATCGGGGCAGCGCGTGGGCTGCACTACCTTCACACAAGTGCGCAGTACACCATCATTCACCGAGATGTAAAGAGCACGAACATCTTATTGGATGAGAAATGGGTGGCTAAAGTCTCGGATTTTGGGCTTTCAAAAATGGGAACCACCAGCATGTCCAAGACCCACATCAGTACAATGGTGAAGGGTAGTTTTGGGTATTTAGACCCAGAATATTACCGGCGTAACCAATTGACAGAGAAGTCTGACGTGTACTCTTTTGGCGTGGTGTTATTTGAGGTATTATGTGCGAGGCCAGCTTTCTTACGAACAGCGGGGAAGAAACAGATGAGTTTGGCTGAGTGGGCCAAGAGCTGTCATCGCGAAGGGACACTTGATAAAATCATTGATCCGAGCTTGAAGGGTAAGATTGGAAAAGCGTGCCTGAATAAGTTTGTTGAGATGGCGATAAGTTGTATTCATGATAATGGGATCCAACGGCCGTCGATGAATGACGTGGTGTGGGGGCTTGAGTATGCATTGCAGCTTCATCAAAAAGCGGAGAGAGATTTAGATTTCAAGGGTGAAGACAAGGTTGCATTAATGAACGATAATGATGCTGCACCTGCAGGGTTTAGCACGAGTTGTTGTTGGGAAGAAGAAGAGGCGTCGAATTCATTGAACAGTAGTGGGCTGGCCAAATTAAGCAGCAGTGACCAAAATTCTACTACTAACGAATCGATTAAAGGGATGTCTAGGATAGTGTTTTCTGGGATCAACGATACCGATGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

886

Amino Acids

98.95

Weight (kDa)

5.84

Isoelectric Point (pI)

36.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2494
AasI	GACNNNNNNGTC	2 cut(s)	1318, 2122
AatII	GACGTC	1 cut(s)	1316
Acc16I	TGCGCA	1 cut(s)	1926
Acc36I	ACCTGC	2 cut(s)	1042, 2494
Acc65I	GGTACC	1 cut(s)	1626
AccB1I	GGYRCC	2 cut(s)	1626, 1734
AccBSI	CCGCTC	1 cut(s)	866
AccII	CGCG	5 cut(s)	539, 1268, 1476, 1897, 2244
AclI	AACGTT	1 cut(s)	1614
AclWI	GGATC	7 cut(s)	335, 1277, 1815, 2264, 2347, 2360, 2642
AcoI	YGGCCR	5 cut(s)	88, 289, 1641, 2360, 2556
AcsI	RAATTY	8 cut(s)	257, 452, 750, 984, 1581, 1697, 2533, 2581
AcuI	CTGAAG	2 cut(s)	390, 1558
AcvI	CACGTG	1 cut(s)	596
AcyI	GRCGYC	3 cut(s)	1313, 1560, 2528
AfaI	GTAC	8 cut(s)	209, 665, 719, 836, 1628, 1931, 2056, 2135
AfiI	CCNNNNNNNGG	5 cut(s)	240, 1344, 1500, 1731, 1744
AflIII	ACRYGT	2 cut(s)	537, 2130
AjiI	CACGTC	2 cut(s)	2131, 2377
AjnI	CCWGG	3 cut(s)	948, 1020, 1859
AjuI	GAANNNNNNNTTGG	4 cut(s)	341, 373, 1955, 1987
AleI	CACNNNNGTG	1 cut(s)	1920
AluBI	AGCT	9 cut(s)	239, 323, 903, 1117, 1125, 2180, 2235, 2277, 2407
AluI	AGCT	9 cut(s)	239, 323, 903, 1117, 1125, 2180, 2235, 2277, 2407
Alw21I	GWGCWC	2 cut(s)	1127, 1961
Alw26I	GTCTC	5 cut(s)	431, 735, 1089, 1232, 2002
AlwI	GGATC	7 cut(s)	335, 1277, 1815, 2264, 2347, 2360, 2642
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	2 cut(s)	867, 1673
AoxI	GGCC	9 cut(s)	88, 289, 1324, 1641, 1689, 2174, 2226, 2360, 2556
ApaI	GGGCCC	1 cut(s)	1693
ApeKI	GCWGC	8 cut(s)	416, 419, 1114, 1892, 1903, 2404, 2480, 2568
ApoI	RAATTY	8 cut(s)	257, 452, 750, 984, 1581, 1697, 2533, 2581
ArsI	GACNNNNNNTTYG	2 cut(s)	1298, 1330
AseI	ATTAAT	1 cut(s)	2462
Asp718I	GGTACC	1 cut(s)	1626
AspLEI	GCGC	2 cut(s)	1897, 1927
AspS9I	GGNCC	6 cut(s)	1271, 1297, 1325, 1689, 1690, 2226
AsuC2I	CCSGG	1 cut(s)	288
AsuHPI	GGTGA	9 cut(s)	4, 58, 141, 274, 1153, 1790, 1934, 2074, 2456
AvaI	CYCGRG	2 cut(s)	867, 1673
AvaII	GGWCC	2 cut(s)	1271, 1297
BaeGI	GKGCMC	1 cut(s)	1693
BalI	TGGCCA	1 cut(s)	2558
BamHI	GGATCC	1 cut(s)	2352
BanI	GGYRCC	2 cut(s)	1626, 1734
BanII	GRGCYC	4 cut(s)	1127, 1508, 1693, 1819
BauI	CACGAG	1 cut(s)	2500
BbrPI	CACGTG	1 cut(s)	596
BbsI	GAAGAC	1 cut(s)	2454
Bbv12I	GWGCWC	2 cut(s)	1127, 1961
BbvI	GCAGC	8 cut(s)	403, 406, 1126, 1890, 1904, 2416, 2467, 2580
BccI	CCATC	8 cut(s)	77, 1172, 1454, 1628, 1858, 1943, 2317, 2642
BceAI	ACGGC	5 cut(s)	1273, 1679, 1748, 2347, 2375
BcgI	CGANNNNNNTGC	6 cut(s)	186, 220, 383, 417, 2459, 2493
BciT130I	CCWGG	3 cut(s)	950, 1022, 1861
BciVI	GTATCC	1 cut(s)	815
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	1 cut(s)	288
BcoDI	GTCTC	5 cut(s)	431, 735, 1089, 1232, 2002
BfaI	CTAG	4 cut(s)	240, 489, 1412, 2616
BfmI	CTRYAG	3 cut(s)	265, 1172, 2487
BfuAI	ACCTGC	2 cut(s)	1042, 2494
BfuI	GTATCC	1 cut(s)	815
BglII	AGATCT	1 cut(s)	1878
BmcAI	AGTACT	1 cut(s)	836
Bme1390I	CCNGG	4 cut(s)	288, 950, 1022, 1861
Bme18I	GGWCC	2 cut(s)	1271, 1297
BmeT110I	CYCGRG	2 cut(s)	867, 1673
BmgBI	CACGTC	2 cut(s)	2131, 2377
BmgT120I	GGNCC	6 cut(s)	1271, 1297, 1325, 1689, 1690, 2226
BmiI	GGNNCC	9 cut(s)	1272, 1273, 1299, 1628, 1690, 1691, 1736, 2026, 2354
BmrFI	CCNGG	4 cut(s)	288, 950, 1022, 1861
BmsI	GCATC	5 cut(s)	507, 520, 1201, 1707, 2467
BpiI	GAAGAC	1 cut(s)	2454
BplI	GAGNNNNNCTC	4 cut(s)	1336, 1368, 1706, 1738
BpmI	CTGGAG	1 cut(s)	147
BpuEI	CTTGAG	3 cut(s)	1433, 1895, 2411
BpuMI	CCSGG	1 cut(s)	288
Bsa29I	ATCGAT	1 cut(s)	2600
BsaAI	YACGTR	1 cut(s)	596
BsaBI	GATNNNNATC	1 cut(s)	1883
BsaHI	GRCGYC	3 cut(s)	1313, 1560, 2528
BsaI	GGTCTC	1 cut(s)	1232
BsaJI	CCNNGG	5 cut(s)	286, 1474, 1542, 1859, 1860
BsaXI	ACNNNNNCTCC	6 cut(s)	493, 523, 647, 677, 990, 1020
Bsc4I	CCNNNNNNNGG	5 cut(s)	240, 1344, 1500, 1731, 1744
Bse118I	RCCGGY	2 cut(s)	371, 2100
Bse1I	ACTGG	4 cut(s)	130, 715, 1135, 1141
Bse3DI	GCAATG	4 cut(s)	622, 879, 1221, 2399
Bse8I	GATNNNNATC	1 cut(s)	1883
BseBI	CCWGG	3 cut(s)	950, 1022, 1861
BseCI	ATCGAT	1 cut(s)	2600
BseDI	CCNNGG	5 cut(s)	286, 1474, 1542, 1859, 1860
BseGI	GGATG	4 cut(s)	179, 1508, 1981, 2616
BseJI	GATNNNNATC	1 cut(s)	1883
BseLI	CCNNNNNNNGG	5 cut(s)	240, 1344, 1500, 1731, 1744
BseMI	GCAATG	4 cut(s)	622, 879, 1221, 2399
BseMII	CTCAG	2 cut(s)	1834, 2211
BseNI	ACTGG	4 cut(s)	130, 715, 1135, 1141
BseRI	GAGGAG	1 cut(s)	449
BseSI	GKGCMC	1 cut(s)	1693
BseX3I	CGGCCG	1 cut(s)	2360
BseXI	GCAGC	8 cut(s)	403, 406, 1126, 1890, 1904, 2416, 2467, 2580
BseYI	CCCAGC	1 cut(s)	319
BsgI	GTGCAG	3 cut(s)	1788, 1889, 2466
Bsh1236I	CGCG	5 cut(s)	539, 1268, 1476, 1897, 2244
Bsh1285I	CGRYCG	1 cut(s)	2363
BshFI	GGCC	9 cut(s)	90, 291, 1326, 1643, 1691, 2176, 2228, 2362, 2558
BshNI	GGYRCC	2 cut(s)	1626, 1734
BshVI	ATCGAT	1 cut(s)	2600
BsiEI	CGRYCG	1 cut(s)	2363
BsiHKAI	GWGCWC	2 cut(s)	1127, 1961
BsiHKCI	CYCGRG	2 cut(s)	867, 1673
BsiSI	CCGG	4 cut(s)	87, 288, 372, 2101
BslFI	GGGAC	3 cut(s)	200, 1284, 2263
BslI	CCNNNNNNNGG	5 cut(s)	240, 1344, 1500, 1731, 1744
BsmAI	GTCTC	5 cut(s)	431, 735, 1089, 1232, 2002
BsmBI	CGTCTC	2 cut(s)	431, 735
BsmFI	GGGAC	3 cut(s)	200, 1284, 2263
BsmI	GAATGC	1 cut(s)	736
BsnI	GGCC	9 cut(s)	90, 291, 1326, 1643, 1691, 2176, 2228, 2362, 2558
Bso31I	GGTCTC	1 cut(s)	1232
BsoBI	CYCGRG	2 cut(s)	867, 1673
Bsp120I	GGGCCC	1 cut(s)	1689
Bsp1286I	GDGCHC	5 cut(s)	1127, 1508, 1693, 1819, 1961
Bsp68I	TCGCGA	1 cut(s)	2244
BspANI	GGCC	9 cut(s)	90, 291, 1326, 1643, 1691, 2176, 2228, 2362, 2558
BspCNI	CTCAG	2 cut(s)	1833, 2212
BspDI	ATCGAT	1 cut(s)	2600
BspFNI	CGCG	5 cut(s)	539, 1268, 1476, 1897, 2244
BspHI	TCATGA	1 cut(s)	2341
BspLI	GGNNCC	9 cut(s)	1272, 1273, 1299, 1628, 1690, 1691, 1736, 2026, 2354
BspMAI	CTGCAG	2 cut(s)	1176, 2491
BspMI	ACCTGC	2 cut(s)	1042, 2494
BspPI	GGATC	7 cut(s)	335, 1277, 1815, 2264, 2347, 2360, 2642
BspT107I	GGYRCC	2 cut(s)	1626, 1734
BspTNI	GGTCTC	1 cut(s)	1232
BsrBI	CCGCTC	1 cut(s)	866
BsrDI	GCAATG	4 cut(s)	622, 879, 1221, 2399
BsrFI	RCCGGY	2 cut(s)	371, 2100
BsrI	ACTGG	4 cut(s)	130, 715, 1135, 1141
BssAI	RCCGGY	2 cut(s)	371, 2100
BssECI	CCNNGG	5 cut(s)	286, 1474, 1542, 1859, 1860
BssNI	GRCGYC	3 cut(s)	1313, 1560, 2528
BssSI	CACGAG	1 cut(s)	2500
BssT1I	CCWWGG	1 cut(s)	1542
Bst2BI	CACGAG	1 cut(s)	2500
Bst2UI	CCWGG	3 cut(s)	950, 1022, 1861
Bst4CI	ACNGT	6 cut(s)	214, 442, 779, 1518, 1739, 2546
Bst6I	CTCTTC	3 cut(s)	756, 1860, 2517
BstACI	GRCGYC	3 cut(s)	1313, 1560, 2528
BstBAI	YACGTR	1 cut(s)	596
BstC8I	GCNNGC	6 cut(s)	28, 1176, 1362, 2178, 2302, 2556
BstDEI	CTNAG	3 cut(s)	1789, 1820, 2220
BstDSI	CCRYGG	1 cut(s)	1474
BstF5I	GGATG	4 cut(s)	179, 1508, 1981, 2616
BstFNI	CGCG	5 cut(s)	539, 1268, 1476, 1897, 2244
BstHHI	GCGC	2 cut(s)	1897, 1927
BstMAI	GTCTC	5 cut(s)	431, 735, 1089, 1232, 2002
BstMCI	CGRYCG	1 cut(s)	2363
BstNI	CCWGG	3 cut(s)	950, 1022, 1861
BstNSI	RCATGY	2 cut(s)	718, 2038
BstSCI	CCNGG	4 cut(s)	286, 948, 1020, 1859
BstSFI	CTRYAG	3 cut(s)	265, 1172, 2487
BstSLI	GKGCMC	1 cut(s)	1693
BstUI	CGCG	5 cut(s)	539, 1268, 1476, 1897, 2244
BstV1I	GCAGC	8 cut(s)	403, 406, 1126, 1890, 1904, 2416, 2467, 2580
BstV2I	GAAGAC	1 cut(s)	2454
BstX2I	RGATCY	2 cut(s)	1878, 2352
BstXI	CCANNNNNNTGG	2 cut(s)	170, 1191
BstYI	RGATCY	2 cut(s)	1878, 2352
BstZI	CGGCCG	1 cut(s)	2360
Bsu15I	ATCGAT	1 cut(s)	2600
BsuI	GTATCC	1 cut(s)	815
BsuRI	GGCC	9 cut(s)	90, 291, 1326, 1643, 1691, 2176, 2228, 2362, 2558
BsuTUI	ATCGAT	1 cut(s)	2600
BtgI	CCRYGG	1 cut(s)	1474
BtgZI	GCGATG	3 cut(s)	1150, 1224, 2225
BtrI	CACGTC	2 cut(s)	2131, 2377
BtsCI	GGATG	4 cut(s)	179, 1508, 1981, 2616
BtsI	GCAGTG	5 cut(s)	411, 645, 1169, 1397, 2578
BtsIMutI	CAGTG	6 cut(s)	411, 645, 708, 1169, 1397, 2578
BtuMI	TCGCGA	1 cut(s)	2244
BveI	ACCTGC	2 cut(s)	1042, 2494
Cac8I	GCNNGC	6 cut(s)	28, 1176, 1362, 2178, 2302, 2556
CaiI	CAGNNNCTG	1 cut(s)	413
CciI	TCATGA	1 cut(s)	2341
CfoI	GCGC	2 cut(s)	1897, 1927
Cfr10I	RCCGGY	2 cut(s)	371, 2100
Cfr13I	GGNCC	6 cut(s)	1271, 1297, 1325, 1689, 1690, 2226
Cfr42I	CCGCGG	1 cut(s)	1477
ClaI	ATCGAT	1 cut(s)	2600
CseI	GACGC	2 cut(s)	1568, 2517
CsiI	ACCWGGT	1 cut(s)	948
Csp6I	GTAC	8 cut(s)	208, 664, 718, 835, 1627, 1930, 2055, 2134
CspCI	CAANNNNNGTGG	6 cut(s)	355, 390, 1375, 1410, 1633, 1668
CviAII	CATG	7 cut(s)	715, 915, 1111, 1187, 1804, 2035, 2342
CviQI	GTAC	8 cut(s)	208, 664, 718, 835, 1627, 1930, 2055, 2134
DdeI	CTNAG	3 cut(s)	1789, 1820, 2220
DrdI	GACNNNNNNGTC	2 cut(s)	1318, 2122
DseDI	GACNNNNNNGTC	2 cut(s)	1318, 2122
EaeI	YGGCCR	5 cut(s)	88, 289, 1641, 2360, 2556
EagI	CGGCCG	1 cut(s)	2360
Eam1104I	CTCTTC	3 cut(s)	756, 1860, 2517
EarI	CTCTTC	3 cut(s)	756, 1860, 2517
EciI	GGCGGA	1 cut(s)	1562
Ecl136II	GAGCTC	1 cut(s)	1125
EclXI	CGGCCG	1 cut(s)	2360
Eco130I	CCWWGG	1 cut(s)	1542
Eco24I	GRGCYC	4 cut(s)	1127, 1508, 1693, 1819
Eco31I	GGTCTC	1 cut(s)	1232
Eco32I	GATATC	2 cut(s)	64, 133
Eco47I	GGWCC	2 cut(s)	1271, 1297
Eco52I	CGGCCG	1 cut(s)	2360
Eco53kI	GAGCTC	1 cut(s)	1125
Eco57I	CTGAAG	2 cut(s)	390, 1558
Eco72I	CACGTG	1 cut(s)	596
Eco88I	CYCGRG	2 cut(s)	867, 1673
EcoICRI	GAGCTC	1 cut(s)	1125
EcoO109I	RGGNCCY	2 cut(s)	1271, 1689
EcoRI	GAATTC	3 cut(s)	452, 1697, 2533
EcoRII	CCWGG	3 cut(s)	948, 1020, 1859
EcoRV	GATATC	2 cut(s)	64, 133
EcoT14I	CCWWGG	1 cut(s)	1542
EcoT22I	ATGCAT	2 cut(s)	106, 2401
EcoT38I	GRGCYC	4 cut(s)	1127, 1508, 1693, 1819
ErhI	CCWWGG	1 cut(s)	1542
Esp3I	CGTCTC	2 cut(s)	431, 735
FaeI	CATG	7 cut(s)	718, 918, 1114, 1190, 1807, 2038, 2345
FalI	AAGNNNNNCTT	4 cut(s)	677, 709, 2238, 2270
FaqI	GGGAC	3 cut(s)	200, 1284, 2263
FatI	CATG	7 cut(s)	714, 914, 1110, 1186, 1803, 2034, 2341
FauI	CCCGC	5 cut(s)	1064, 1261, 1481, 1595, 2188
FauNDI	CATATG	1 cut(s)	106
FbaI	TGATCA	1 cut(s)	109
FokI	GGATG	4 cut(s)	166, 1495, 1988, 2623
FriOI	GRGCYC	4 cut(s)	1127, 1508, 1693, 1819
FspBI	CTAG	4 cut(s)	240, 489, 1412, 2616
FspI	TGCGCA	1 cut(s)	1926
GlaI	GCGC	2 cut(s)	1896, 1926
GsaI	CCCAGC	1 cut(s)	323
GsuI	CTGGAG	1 cut(s)	147
HaeIII	GGCC	9 cut(s)	90, 291, 1326, 1643, 1691, 2176, 2228, 2362, 2558
HapII	CCGG	4 cut(s)	87, 288, 372, 2101
HgaI	GACGC	2 cut(s)	1568, 2517
HhaI	GCGC	2 cut(s)	1897, 1927
Hin1I	GRCGYC	3 cut(s)	1313, 1560, 2528
Hin1II	CATG	7 cut(s)	718, 918, 1114, 1190, 1807, 2038, 2345
Hin6I	GCGC	2 cut(s)	1895, 1925
HinP1I	GCGC	2 cut(s)	1895, 1925
HinfI	GANTC	7 cut(s)	601, 669, 769, 932, 1156, 1676, 2597
HpaII	CCGG	4 cut(s)	87, 288, 372, 2101
HphI	GGTGA	9 cut(s)	4, 58, 141, 274, 1153, 1790, 1934, 2074, 2456
Hpy166II	GTNNAC	7 cut(s)	210, 507, 664, 856, 1618, 1932, 2134
Hpy188I	TCNGA	6 cut(s)	433, 998, 1122, 2002, 2128, 2274
Hpy188III	TCNNGA	5 cut(s)	1229, 1702, 1714, 2243, 2342
Hpy8I	GTNNAC	7 cut(s)	210, 507, 664, 856, 1618, 1932, 2134
Hpy99I	CGWCG	7 cut(s)	11, 1315, 1318, 1321, 1440, 2368, 2533
HpyAV	CCTTC	7 cut(s)	364, 395, 1769, 1922, 2059, 2240, 2275
HpyCH4III	ACNGT	6 cut(s)	214, 442, 779, 1518, 1739, 2546
HpyCH4IV	ACGT	6 cut(s)	503, 595, 1313, 1614, 2130, 2376
HpyF3I	CTNAG	3 cut(s)	1789, 1820, 2220
HpySE526I	ACGT	6 cut(s)	503, 595, 1313, 1614, 2130, 2376
Hsp92I	GRCGYC	3 cut(s)	1313, 1560, 2528
Hsp92II	CATG	7 cut(s)	718, 918, 1114, 1190, 1807, 2038, 2345
HspAI	GCGC	2 cut(s)	1895, 1925
KflI	GGGWCCC	1 cut(s)	1271
KpnI	GGTACC	1 cut(s)	1630
Ksp22I	TGATCA	1 cut(s)	109
KspI	CCGCGG	1 cut(s)	1477
LmnI	GCTCC	3 cut(s)	847, 1472, 1478
Lsp1109I	GCAGC	8 cut(s)	403, 406, 1126, 1890, 1904, 2416, 2467, 2580
LweI	GCATC	5 cut(s)	507, 520, 1201, 1707, 2467
MabI	ACCWGGT	1 cut(s)	948
MaeI	CTAG	4 cut(s)	240, 489, 1412, 2616
MaeII	ACGT	6 cut(s)	503, 595, 1313, 1614, 2130, 2376
MaeIII	GTNAC	6 cut(s)	10, 409, 1529, 1610, 2105, 2573
MbiI	CCGCTC	1 cut(s)	866
MfeI	CAATTG	5 cut(s)	73, 168, 724, 1392, 2111
MflI	RGATCY	2 cut(s)	1878, 2352
MhlI	GDGCHC	5 cut(s)	1127, 1508, 1693, 1819, 1961
MlsI	TGGCCA	1 cut(s)	2558
MluI	ACGCGT	1 cut(s)	537
MluNI	TGGCCA	1 cut(s)	2558
MlyI	GAGTC	2 cut(s)	778, 1685
MmeI	TCCRAC	3 cut(s)	411, 832, 2380
Mox20I	TGGCCA	1 cut(s)	2558
Mph1103I	ATGCAT	2 cut(s)	106, 2401
MscI	TGGCCA	1 cut(s)	2558
MseI	TTAA	8 cut(s)	276, 494, 546, 774, 1202, 2462, 2564, 2604
MslI	CAYNNNNRTG	6 cut(s)	713, 966, 1920, 1947, 2033, 2346
Msp20I	TGGCCA	1 cut(s)	2558
MspA1I	CMGCKG	3 cut(s)	1049, 1476, 2195
MspI	CCGG	4 cut(s)	87, 288, 372, 2101
MspR9I	CCNGG	4 cut(s)	288, 950, 1022, 1861
MunI	CAATTG	5 cut(s)	73, 168, 724, 1392, 2111
Mva1269I	GAATGC	1 cut(s)	736
MvaI	CCWGG	3 cut(s)	950, 1022, 1861
MvnI	CGCG	5 cut(s)	539, 1268, 1476, 1897, 2244
NciI	CCSGG	1 cut(s)	288
NdeI	CATATG	1 cut(s)	106
NlaIII	CATG	7 cut(s)	718, 918, 1114, 1190, 1807, 2038, 2345
NlaIV	GGNNCC	9 cut(s)	1272, 1273, 1299, 1628, 1690, 1691, 1736, 2026, 2354
NmuCI	GTSAC	4 cut(s)	10, 409, 1529, 2573
NruI	TCGCGA	1 cut(s)	2244
NsbI	TGCGCA	1 cut(s)	1926
NsiI	ATGCAT	2 cut(s)	106, 2401
NspI	RCATGY	2 cut(s)	718, 2038
OliI	CACNNNNGTG	1 cut(s)	1920
PagI	TCATGA	1 cut(s)	2341
PaqCI	CACCTGC	1 cut(s)	2494
PasI	CCCWGGG	1 cut(s)	1860
PcsI	WCGNNNNNNNCGW	2 cut(s)	27, 1316
PctI	GAATGC	1 cut(s)	736
PfeI	GAWTC	5 cut(s)	601, 669, 932, 1156, 2597
PflFI	GACNNNGTC	1 cut(s)	1315
PleI	GAGTC	2 cut(s)	777, 1684
PmaCI	CACGTG	1 cut(s)	596
PmlI	CACGTG	1 cut(s)	596
PpsI	GAGTC	2 cut(s)	777, 1684
Ppu21I	YACGTR	1 cut(s)	596
PpuMI	RGGWCCY	1 cut(s)	1271
PshBI	ATTAAT	1 cut(s)	2462
Psp124BI	GAGCTC	1 cut(s)	1127
Psp1406I	AACGTT	1 cut(s)	1614
Psp5II	RGGWCCY	1 cut(s)	1271
Psp6I	CCWGG	3 cut(s)	948, 1020, 1859
PspCI	CACGTG	1 cut(s)	596
PspFI	CCCAGC	1 cut(s)	319
PspGI	CCWGG	3 cut(s)	948, 1020, 1859
PspN4I	GGNNCC	9 cut(s)	1272, 1273, 1299, 1628, 1690, 1691, 1736, 2026, 2354
PspOMI	GGGCCC	1 cut(s)	1689
PspPI	GGNCC	6 cut(s)	1271, 1297, 1325, 1689, 1690, 2226
PspPPI	RGGWCCY	1 cut(s)	1271
PstI	CTGCAG	2 cut(s)	1176, 2491
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	2 cut(s)	1878, 2352
PsyI	GACNNNGTC	1 cut(s)	1315
RruI	TCGCGA	1 cut(s)	2244
RsaI	GTAC	8 cut(s)	209, 665, 719, 836, 1628, 1931, 2056, 2135
RsaNI	GTAC	8 cut(s)	208, 664, 718, 835, 1627, 1930, 2055, 2134
RseI	CAYNNNNRTG	6 cut(s)	713, 966, 1920, 1947, 2033, 2346
SacI	GAGCTC	1 cut(s)	1127
SacII	CCGCGG	1 cut(s)	1477
SaqAI	TTAA	8 cut(s)	276, 494, 546, 774, 1202, 2462, 2564, 2604
Sau96I	GGNCC	6 cut(s)	1271, 1297, 1325, 1689, 1690, 2226
SbfI	CCTGCAGG	1 cut(s)	2491
ScaI	AGTACT	1 cut(s)	836
SchI	GAGTC	2 cut(s)	778, 1685
ScrFI	CCNGG	4 cut(s)	288, 950, 1022, 1861
SdaI	CCTGCAGG	1 cut(s)	2491
SduI	GDGCHC	5 cut(s)	1127, 1508, 1693, 1819, 1961
SexAI	ACCWGGT	1 cut(s)	948
SfaNI	GCATC	5 cut(s)	507, 520, 1201, 1707, 2467
SfcI	CTRYAG	3 cut(s)	265, 1172, 2487
Sfr303I	CCGCGG	1 cut(s)	1477
SgrBI	CCGCGG	1 cut(s)	1477
SinI	GGWCC	2 cut(s)	1271, 1297
SmiMI	CAYNNNNRTG	6 cut(s)	713, 966, 1920, 1947, 2033, 2346
SmlI	CTYRAG	3 cut(s)	1448, 1874, 2390
SmoI	CTYRAG	3 cut(s)	1448, 1874, 2390
Sse8387I	CCTGCAGG	1 cut(s)	2491
SspI	AATATT	1 cut(s)	2096
SspMI	CTAG	4 cut(s)	240, 489, 1412, 2616
SstI	GAGCTC	1 cut(s)	1127
StyD4I	CCNGG	4 cut(s)	286, 948, 1020, 1859
StyI	CCWWGG	1 cut(s)	1542
TaaI	ACNGT	6 cut(s)	214, 442, 779, 1518, 1739, 2546
TaiI	ACGT	6 cut(s)	506, 598, 1316, 1617, 2133, 2379
TaqI	TCGA	7 cut(s)	57, 1230, 1632, 1713, 2366, 2531, 2600
TatI	WGTACW	4 cut(s)	834, 1929, 2054, 2133
TauI	GCSGC	2 cut(s)	793, 1643
TfiI	GAWTC	5 cut(s)	601, 669, 932, 1156, 2597
Tru1I	TTAA	8 cut(s)	276, 494, 546, 774, 1202, 2462, 2564, 2604
Tru9I	TTAA	8 cut(s)	276, 494, 546, 774, 1202, 2462, 2564, 2604
TscAI	CASTG	6 cut(s)	418, 652, 715, 1176, 1404, 2578
TseFI	GTSAC	4 cut(s)	10, 409, 1529, 2573
TseI	GCWGC	8 cut(s)	416, 419, 1114, 1892, 1903, 2404, 2480, 2568
Tsp45I	GTSAC	4 cut(s)	10, 409, 1529, 2573
TspGWI	ACGGA	3 cut(s)	293, 564, 1721
TspRI	CASTG	6 cut(s)	418, 652, 715, 1176, 1404, 2578
Tth111I	GACNNNGTC	1 cut(s)	1315
VpaK11BI	GGWCC	2 cut(s)	1271, 1297
VspI	ATTAAT	1 cut(s)	2462
XapI	RAATTY	8 cut(s)	257, 452, 750, 984, 1581, 1697, 2533, 2581
XceI	RCATGY	2 cut(s)	718, 2038
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1857
XspI	CTAG	4 cut(s)	240, 489, 1412, 2616
ZraI	GACGTC	1 cut(s)	1314
ZrmI	AGTACT	1 cut(s)	836
Zsp2I	ATGCAT	2 cut(s)	106, 2401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.