Rw2G048330

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
75905645 .. 75908299
2655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G048330.1

Sequence Viewer

Length: 2655 bp
ATGAAACCAATCATCACTCCTCTCTACCTCTCCTTGTTCCTCCACATCCTCACTCTCTTCGTCACCGCTCAGTCGCCACCATACACTCCGGTCGACAATATCGCCCTTACCTGTGGCAATTCCGGCCAACAGAGCTCCAATGACCGCAGAAAGTGGAGCGGAGATATCGACTCAAAATTCACCCCAATTGGTAGCGCATCCCAATCCATAGATGCACCGCGATCGTCCACCGTTAGCCAAGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCAAATTCACTTACACAATTCCCCTCTCTCCCGGCCAAAAATTCATCCGCTTGCATTTCAATCCAGATACATACAACCCGGACTTCCAACGCTCCAACTCCCTCTTCTCCGTCACCGCCGCCGGCTTCACTCTTCTCAAAGACTTCAACGCCTCCGTCACCGCCGACGCCTCCGGCGGGTCCACGCTGGTCATAGAATTTTGTGTAAACATCGAGACAGGACAGAGACTCGAGATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCCATGCCCACCAGTTTTTACTACACCGCAGGCGAAAGCCAAGGGATTCGGAATGTAGGCAACGAACAAAACTATTACATTGAAAACAGCACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGCGGAGGCTCCATCCCGCCGGTCGAAGACACCGGAATGTACCGGTATTGGGACTCCCCCGACAATACCTATTTGGATTATGTGAGTAGAGAATTCAGCGTACTACCACAGAACAGTACAATCGAGCTCAACTTTGTCGAAGTTCCAGAATACTCTGCCCCAAAAGCAGTTTACACAACCGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTCACATGGGTATTTCCCTTAGATCCCAAGTTTAATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTAATATTACCAAGTACGGAGATCGATCGTTTCAAATCTACATGGCCAACCAAATCGCAGAAAAACTTGCAGATGTCATCGGATGGAGTAAAGCAAATGGGAATCCAGTTTACAGAGACTACGTTGTGGGAATGTTCAAGTCTCCGGTTGGAAGCGAGAAGAAAGTTAACCTCTCTCTAGTACTCTCAGCGCTACAGAGAGACTCGTATACTAAATACAACGATGGCATCTTGAACGGGCTAGAAATCTTCAAGCTCAGCGACTCGAGTCGGAATCTTGCCGGACCCAACCCCGACCCACCTCCGGTGATACCACCAAAGATACCACCGAAGAGACCCAGTAAGAAAAAGTCTACTCCTATGGCAGCTATTATCGCAGGCGTAGTTTCCGGGTTTCTTATGCTCTCTGTTCTCGGTTTCTTTGTTCTCCGAAGAGGGAGAAAGGCCAAGGACTATAGCTCAAGTCAAGTAAAGTGGGGTCTGCTTTCATTTTCAACGACTACTAAGTCCTCCAAGTCCACCACGTCTTACGGTTCATCTCTGCCGTCCGAGCTGTGTCATCACTTTTCATTGCCGGAGATCAGAGCCGCCACGCAGAACTTTGATGAATCGAACGTTATTGGGCGTGGCGGGTTTGGTAACGTGTACAAAGGTACCATCAACGGTGCGTCCACCCCCTTTGCGATCAAACGGCTGAAAGCAGAGTCGTCACAGGGTGCGCTTGAGTTCAAGACGGAGATCGAATTGCTCTCCCAACTCCGTCACGTCCATCTCGTGTCTCTGGTCGGGTACTGTGACGACAACGGTGAGATGATTTTGGTGTATGACTATATGGAAAATGGGACCCTACGCGATCATTTGTATAACTCTGAAAATCCACCTCTTCCTTGGGAACAAAGGCTTCAAGTTTGTATTGGTGCGGCGCGTGGGTTGCACTACCTTCACACTGGTGTCAAGTGTATGATCATTCACCGAGACGTGAAGAGCACGAACATCTTGTTGGATGATAAATGGGTGGCCAAGGTCGCTGATTTCGGGTTGTCGAAAATGGGCACGACCACCATGTCTAAGACCCACATTAGCACCATGGTCAAGGGTAGTTTCGGCTATCTTGACCCGGAGTACTACCGTCGTCAACAGTTGACTGAGAAGTCTGATGTGTACTCATTCGGAGTAGTATTATGTGAGGTGTTGTGTGCTAGGCCGGCTTTGATCCGTACAGCAGACAAGAAGCAAATGAACCTAGCTGCCTGGTTTAAGACATGTCATGGAAACGGAACACTTGACCAAATCATTGACCCGAATTTGAGTGGTAAGATTGTAAATGAGTGCTTGAACAAGTTTGTTGAAATTGCAATTAGTTGTATGCATGATAATGGGAGTGAACGACCGTCCATGAATGATGTTATATGGGCGCTTGATTGTGCATTAAAACTTCAACAGACCGCAGAGGGTTCGGATTTGGATTTCAGTGCCGGGAAGAAGGGTGAAGATGAGGCTTCAGTGTTGAATGGTAGTGATGCAGGGTTTAGTGGCACATGGGAAGACTCGTCAGGTTCCAAGAACAGCAGGGTGACCAAAACTAGTAGTAGTTACCAAAATACTACTGCTAGTGATTCCATTAAAGGGCTGTCAGGTACAGTCTTCTCTGAGATCTACGATCCCAATGGAAGATGA

Protein Analysis

884

Amino Acids

97.75

Weight (kDa)

8.03

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 37 - 411 6.1e-32 Malectin-like domain
Pkinase PF00069 529 - 795 6.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 531 - 796 1.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1483, 2041, 2128
Acc65I GGTACC 1 cut(s) 1631
AccB1I GGYRCC 1 cut(s) 1631
AccBSI CCGCTC 2 cut(s) 68, 159
AccI GTMKAC 3 cut(s) 93, 1187, 1331
AccII CGCG 3 cut(s) 220, 1830, 1903
AclI AACGTT 1 cut(s) 1593
AclWI GGATC 3 cut(s) 926, 2185, 2633
AcoI YGGCCR 4 cut(s) 124, 304, 1023, 1995
AcsI RAATTY 6 cut(s) 176, 275, 311, 467, 776, 2281
AcuI CTGAAG 1 cut(s) 2463
AcyI GRCGYC 1 cut(s) 438
AdeI CACNNNGTG 1 cut(s) 1694
AfeI AGCGCT 1 cut(s) 1170
AfiI CCNNNNNNNGG 6 cut(s) 258, 447, 733, 916, 1282, 2604
AflIII ACRYGT 2 cut(s) 1620, 2240
AgeI ACCGGT 2 cut(s) 726, 863
AhlI ACTAGT 1 cut(s) 2561
AjiI CACGTC 3 cut(s) 1503, 1744, 1957
AjnI CCWGG 2 cut(s) 948, 2228
AjuI GAANNNNNNNTTGG 4 cut(s) 359, 391, 1961, 1993
AleI CACNNNNGTG 1 cut(s) 1926
Alw21I GWGCWC 3 cut(s) 137, 813, 1967
Alw26I GTCTC 9 cut(s) 479, 490, 949, 1089, 1125, 1173, 1306, 1761, 1947
AlwI GGATC 3 cut(s) 926, 2185, 2633
Ama87I CYCGRG 2 cut(s) 500, 1243
Aor51HI AGCGCT 1 cut(s) 1170
AoxI GGCC 6 cut(s) 124, 304, 1023, 1422, 1995, 2180
ApeKI GCWGC 2 cut(s) 1343, 2225
ApoI RAATTY 6 cut(s) 176, 275, 311, 467, 776, 2281
AsiGI ACCGGT 2 cut(s) 726, 863
Asp718I GGTACC 1 cut(s) 1631
AspLEI GCGC 5 cut(s) 197, 1171, 1699, 1903, 2395
AspS9I GGNCC 3 cut(s) 450, 1262, 1821
AsuC2I CCSGG 5 cut(s) 303, 350, 1369, 2096, 2455
AvaI CYCGRG 2 cut(s) 500, 1243
AvaII GGWCC 3 cut(s) 450, 1262, 1821
BaeGI GKGCMC 1 cut(s) 2033
BaeI ACNNNNGTAYC 2 cut(s) 1615, 1648
BalI TGGCCA 2 cut(s) 1025, 1997
BanI GGYRCC 1 cut(s) 1631
BanII GRGCYC 2 cut(s) 137, 813
BauI CACGAG 1 cut(s) 1751
BbsI GAAGAC 3 cut(s) 717, 2529, 2614
Bbv12I GWGCWC 3 cut(s) 137, 813, 1967
BbvI GCAGC 2 cut(s) 1355, 2212
BccI CCATC 7 cut(s) 658, 704, 899, 1056, 1196, 1643, 1755
BceAI ACGGC 2 cut(s) 1507, 1685
BcgI CGANNNNNNTGC 4 cut(s) 204, 238, 2415, 2449
BciT130I CCWGG 2 cut(s) 950, 2230
BclI TGATCA 1 cut(s) 1941
BcnI CCSGG 5 cut(s) 303, 350, 1369, 2096, 2455
BcoDI GTCTC 9 cut(s) 479, 490, 949, 1089, 1125, 1173, 1306, 1761, 1947
BcuI ACTAGT 1 cut(s) 2561
BfaI CTAG 6 cut(s) 1157, 1220, 2178, 2222, 2562, 2589
BfmI CTRYAG 2 cut(s) 1172, 1432
BfoI RGCGCY 2 cut(s) 1172, 2396
BglII AGATCT 1 cut(s) 2631
BisI GCNGC 5 cut(s) 390, 1344, 1566, 1899, 2226
BlpI GCTNAGC 1 cut(s) 1235
BlsI GCNGC 5 cut(s) 391, 1345, 1567, 1900, 2227
BmcAI AGTACT 2 cut(s) 1161, 2102
Bme1390I CCNGG 7 cut(s) 303, 350, 950, 1369, 2096, 2230, 2455
Bme18I GGWCC 3 cut(s) 450, 1262, 1821
BmeT110I CYCGRG 2 cut(s) 500, 1243
BmgBI CACGTC 3 cut(s) 1503, 1744, 1957
BmgT120I GGNCC 3 cut(s) 450, 1262, 1821
BmiI GGNNCC 7 cut(s) 451, 694, 1264, 1633, 1822, 1823, 2536
BmrFI CCNGG 7 cut(s) 303, 350, 950, 1369, 2096, 2230, 2455
BmrI ACTGGG 1 cut(s) 1311
BmsI GCATC 5 cut(s) 202, 206, 517, 1215, 2488
BmuI ACTGGG 1 cut(s) 1311
BoxI GACNNNNGTC 1 cut(s) 1245
BpiI GAAGAC 3 cut(s) 717, 2529, 2614
BpmI CTGGAG 1 cut(s) 680
Bpu1102I GCTNAGC 1 cut(s) 1235
BpuEI CTTGAG 2 cut(s) 1423, 1721
BpuMI CCSGG 5 cut(s) 303, 350, 1369, 2096, 2455
Bsa29I ATCGAT 1 cut(s) 1003
BsaHI GRCGYC 1 cut(s) 438
BsaI GGTCTC 1 cut(s) 1306
BsaJI CCNNGG 5 cut(s) 601, 1425, 1865, 1998, 2064
BsaWI WCCGGW 6 cut(s) 88, 716, 726, 863, 1123, 1282
BsaXI ACNNNNNCTCC 2 cut(s) 653, 683
Bsc4I CCNNNNNNNGG 6 cut(s) 258, 447, 733, 916, 1282, 2604
Bse118I RCCGGY 5 cut(s) 392, 703, 726, 863, 2182
Bse1I ACTGG 4 cut(s) 573, 1085, 1317, 1930
Bse3DI GCAATG 1 cut(s) 1547
BseBI CCWGG 2 cut(s) 950, 2230
BseCI ATCGAT 1 cut(s) 1003
BseDI CCNNGG 5 cut(s) 601, 1425, 1865, 1998, 2064
BseGI GGATG 7 cut(s) 45, 197, 315, 696, 885, 1067, 1987
BseLI CCNNNNNNNGG 6 cut(s) 258, 447, 733, 916, 1282, 2604
BseMI GCAATG 1 cut(s) 1547
BseMII CTCAG 5 cut(s) 83, 1179, 1249, 2115, 2619
BseNI ACTGG 4 cut(s) 573, 1085, 1317, 1930
BseRI GAGGAG 1 cut(s) 9
BseSI GKGCMC 1 cut(s) 2033
BseXI GCAGC 2 cut(s) 1355, 2212
Bsh1236I CGCG 3 cut(s) 220, 1830, 1903
Bsh1285I CGRYCG 6 cut(s) 93, 224, 708, 868, 1007, 2369
BshFI GGCC 6 cut(s) 126, 306, 1025, 1424, 1997, 2182
BshNI GGYRCC 1 cut(s) 1631
BshTI ACCGGT 2 cut(s) 726, 863
BshVI ATCGAT 1 cut(s) 1003
BsiEI CGRYCG 6 cut(s) 93, 224, 708, 868, 1007, 2369
BsiHKAI GWGCWC 3 cut(s) 137, 813, 1967
BsiHKCI CYCGRG 2 cut(s) 500, 1243
BsiWI CGTACG 1 cut(s) 531
BslFI GGGAC 3 cut(s) 227, 749, 1834
BslI CCNNNNNNNGG 6 cut(s) 258, 447, 733, 916, 1282, 2604
BsmAI GTCTC 9 cut(s) 479, 490, 949, 1089, 1125, 1173, 1306, 1761, 1947
BsmBI CGTCTC 1 cut(s) 1947
BsmFI GGGAC 3 cut(s) 227, 749, 1834
BsnI GGCC 6 cut(s) 126, 306, 1025, 1424, 1997, 2182
Bso31I GGTCTC 1 cut(s) 1306
BsoBI CYCGRG 2 cut(s) 500, 1243
Bsp1286I GDGCHC 4 cut(s) 137, 813, 1967, 2033
Bsp1407I TGTACA 1 cut(s) 1623
Bsp1720I GCTNAGC 1 cut(s) 1235
Bsp19I CCATGG 1 cut(s) 2064
BspANI GGCC 6 cut(s) 126, 306, 1025, 1424, 1997, 2182
BspCNI CTCAG 5 cut(s) 82, 1178, 1248, 2116, 2620
BspDI ATCGAT 1 cut(s) 1003
BspFNI CGCG 3 cut(s) 220, 1830, 1903
BspLI GGNNCC 7 cut(s) 451, 694, 1264, 1633, 1822, 1823, 2536
BspPI GGATC 3 cut(s) 926, 2185, 2633
BspQI GCTCTTC 1 cut(s) 1955
BspT107I GGYRCC 1 cut(s) 1631
BspTNI GGTCTC 1 cut(s) 1306
BsrBI CCGCTC 2 cut(s) 68, 159
BsrDI GCAATG 1 cut(s) 1547
BsrFI RCCGGY 5 cut(s) 392, 703, 726, 863, 2182
BsrGI TGTACA 1 cut(s) 1623
BsrI ACTGG 4 cut(s) 573, 1085, 1317, 1930
BssAI RCCGGY 5 cut(s) 392, 703, 726, 863, 2182
BssECI CCNNGG 5 cut(s) 601, 1425, 1865, 1998, 2064
BssNAI GTATAC 1 cut(s) 1188
BssNI GRCGYC 1 cut(s) 438
BssSI CACGAG 1 cut(s) 1751
BssT1I CCWWGG 5 cut(s) 601, 1425, 1865, 1998, 2064
Bst1107I GTATAC 1 cut(s) 1188
Bst2BI CACGAG 1 cut(s) 1751
Bst2UI CCWGG 2 cut(s) 950, 2230
Bst6I CTCTTC 7 cut(s) 62, 380, 408, 1304, 1405, 1866, 1955
BstACI GRCGYC 1 cut(s) 438
BstAUI TGTACA 1 cut(s) 1623
BstC8I GCNNGC 5 cut(s) 323, 394, 592, 1357, 2184
BstDEI CTNAG 8 cut(s) 69, 928, 1165, 1235, 1482, 2046, 2124, 2628
BstDSI CCRYGG 1 cut(s) 2064
BstEII GGTNACC 1 cut(s) 2551
BstF5I GGATG 7 cut(s) 45, 197, 315, 696, 885, 1067, 1987
BstFNI CGCG 3 cut(s) 220, 1830, 1903
BstH2I RGCGCY 2 cut(s) 1172, 2396
BstHHI GCGC 5 cut(s) 197, 1171, 1699, 1903, 2395
BstMAI GTCTC 9 cut(s) 479, 490, 949, 1089, 1125, 1173, 1306, 1761, 1947
BstMCI CGRYCG 6 cut(s) 93, 224, 708, 868, 1007, 2369
BstMWI GCNNNNNNNGC 8 cut(s) 123, 132, 848, 1352, 1528, 1909, 2003, 2183
BstNI CCWGG 2 cut(s) 950, 2230
BstNSI RCATGY 1 cut(s) 2244
BstPAI GACNNNNGTC 1 cut(s) 1245
BstPI GGTNACC 1 cut(s) 2551
BstSCI CCNGG 7 cut(s) 301, 348, 948, 1367, 2094, 2228, 2453
BstSFI CTRYAG 2 cut(s) 1172, 1432
BstSLI GKGCMC 1 cut(s) 2033
BstUI CGCG 3 cut(s) 220, 1830, 1903
BstV1I GCAGC 2 cut(s) 1355, 2212
BstV2I GAAGAC 3 cut(s) 717, 2529, 2614
BstX2I RGATCY 2 cut(s) 931, 2631
BstYI RGATCY 2 cut(s) 931, 2631
BstZ17I GTATAC 1 cut(s) 1188
Bsu15I ATCGAT 1 cut(s) 1003
BsuRI GGCC 6 cut(s) 126, 306, 1025, 1424, 1997, 2182
BsuTUI ATCGAT 1 cut(s) 1003
BtgI CCRYGG 1 cut(s) 2064
BtrI CACGTC 3 cut(s) 1503, 1744, 1957
BtsCI GGATG 7 cut(s) 45, 197, 315, 696, 885, 1067, 1987
BtsIMutI CAGTG 3 cut(s) 1923, 2455, 2487
Cac8I GCNNGC 5 cut(s) 323, 394, 592, 1357, 2184
CfoI GCGC 5 cut(s) 197, 1171, 1699, 1903, 2395
Cfr10I RCCGGY 5 cut(s) 392, 703, 726, 863, 2182
Cfr13I GGNCC 3 cut(s) 450, 1262, 1821
ClaI ATCGAT 1 cut(s) 1003
CseI GACGC 2 cut(s) 446, 1635
CsiI ACCWGGT 1 cut(s) 948
CspAI ACCGGT 2 cut(s) 726, 863
CspCI CAANNNNNGTGG 4 cut(s) 1433, 1468, 1639, 1674
DdeI CTNAG 8 cut(s) 69, 928, 1165, 1235, 1482, 2046, 2124, 2628
DraIII CACNNNGTG 1 cut(s) 1694
DrdI GACNNNNNNGTC 3 cut(s) 1483, 2041, 2128
DseDI GACNNNNNNGTC 3 cut(s) 1483, 2041, 2128
EaeI YGGCCR 4 cut(s) 124, 304, 1023, 1995
Eam1104I CTCTTC 7 cut(s) 62, 380, 408, 1304, 1405, 1866, 1955
EarI CTCTTC 7 cut(s) 62, 380, 408, 1304, 1405, 1866, 1955
EciI GGCGGA 1 cut(s) 702
Ecl136II GAGCTC 2 cut(s) 135, 811
Eco130I CCWWGG 5 cut(s) 601, 1425, 1865, 1998, 2064
Eco24I GRGCYC 2 cut(s) 137, 813
Eco31I GGTCTC 1 cut(s) 1306
Eco32I GATATC 1 cut(s) 166
Eco47I GGWCC 3 cut(s) 450, 1262, 1821
Eco47III AGCGCT 1 cut(s) 1170
Eco53kI GAGCTC 2 cut(s) 135, 811
Eco57I CTGAAG 1 cut(s) 2463
Eco88I CYCGRG 2 cut(s) 500, 1243
Eco91I GGTNACC 1 cut(s) 2551
EcoICRI GAGCTC 2 cut(s) 135, 811
EcoO109I RGGNCCY 1 cut(s) 1821
EcoO65I GGTNACC 1 cut(s) 2551
EcoRI GAATTC 1 cut(s) 776
EcoRII CCWGG 2 cut(s) 948, 2228
EcoRV GATATC 1 cut(s) 166
EcoT14I CCWWGG 5 cut(s) 601, 1425, 1865, 1998, 2064
EcoT22I ATGCAT 1 cut(s) 2349
EcoT38I GRGCYC 2 cut(s) 137, 813
ErhI CCWWGG 5 cut(s) 601, 1425, 1865, 1998, 2064
Esp3I CGTCTC 1 cut(s) 1947
FaqI GGGAC 3 cut(s) 227, 749, 1834
FauI CCCGC 3 cut(s) 440, 708, 1601
FbaI TGATCA 1 cut(s) 1941
FblI GTMKAC 3 cut(s) 93, 1187, 1331
Fnu4HI GCNGC 5 cut(s) 390, 1344, 1566, 1899, 2226
FokI GGATG 7 cut(s) 32, 184, 302, 683, 892, 1074, 1994
FriOI GRGCYC 2 cut(s) 137, 813
Fsp4HI GCNGC 5 cut(s) 390, 1344, 1566, 1899, 2226
FspBI CTAG 6 cut(s) 1157, 1220, 2178, 2222, 2562, 2589
GlaI GCGC 5 cut(s) 196, 1170, 1698, 1902, 2394
GluI GCNGC 5 cut(s) 390, 1344, 1566, 1899, 2226
GsuI CTGGAG 1 cut(s) 680
HaeII RGCGCY 2 cut(s) 1172, 2396
HaeIII GGCC 6 cut(s) 126, 306, 1025, 1424, 1997, 2182
HgaI GACGC 2 cut(s) 446, 1635
HhaI GCGC 5 cut(s) 197, 1171, 1699, 1903, 2395
Hin1I GRCGYC 1 cut(s) 438
Hin6I GCGC 5 cut(s) 195, 1169, 1697, 1901, 2393
HinP1I GCGC 5 cut(s) 195, 1169, 1697, 1901, 2393
HincII GTYRAC 4 cut(s) 94, 1147, 2114, 2121
HindII GTYRAC 4 cut(s) 94, 1147, 2114, 2121
HpaI GTTAAC 1 cut(s) 1147
Hpy188III TCNNGA 8 cut(s) 335, 484, 502, 659, 830, 1210, 1708, 2090
Hpy99I CGWCG 3 cut(s) 440, 686, 2112
HpyAV CCTTC 3 cut(s) 520, 1928, 2455
HpyCH4IV ACGT 7 cut(s) 681, 1101, 1502, 1593, 1620, 1743, 1956
HpyCH4V TGCA 8 cut(s) 215, 325, 1049, 1912, 2333, 2347, 2405, 2501
HpyF10VI GCNNNNNNNGC 8 cut(s) 123, 132, 848, 1352, 1528, 1909, 2003, 2183
HpyF3I CTNAG 8 cut(s) 69, 928, 1165, 1235, 1482, 2046, 2124, 2628
HpySE526I ACGT 7 cut(s) 681, 1101, 1502, 1593, 1620, 1743, 1956
Hsp92I GRCGYC 1 cut(s) 438
HspAI GCGC 5 cut(s) 195, 1169, 1697, 1901, 2393
KflI GGGWCCC 1 cut(s) 1821
KpnI GGTACC 1 cut(s) 1635
KroI GCCGGC 2 cut(s) 392, 2182
KroNI GCCGGC 2 cut(s) 394, 2184
Ksp22I TGATCA 1 cut(s) 1941
KspAI GTTAAC 1 cut(s) 1147
LguI GCTCTTC 1 cut(s) 1955
LmnI GCTCC 5 cut(s) 140, 156, 275, 368, 698
Lsp1109I GCAGC 2 cut(s) 1355, 2212
LweI GCATC 5 cut(s) 202, 206, 517, 1215, 2488
MabI ACCWGGT 1 cut(s) 948
MaeI CTAG 6 cut(s) 1157, 1220, 2178, 2222, 2562, 2589
MaeII ACGT 7 cut(s) 681, 1101, 1502, 1593, 1620, 1743, 1956
MaeIII GTNAC 9 cut(s) 61, 382, 427, 1616, 1686, 1739, 1772, 2551, 2570
MbiI CCGCTC 2 cut(s) 68, 159
MfeI CAATTG 1 cut(s) 186
MflI RGATCY 2 cut(s) 931, 2631
MhlI GDGCHC 4 cut(s) 137, 813, 1967, 2033
MlsI TGGCCA 2 cut(s) 1025, 1997
MluNI TGGCCA 2 cut(s) 1025, 1997
MlyI GAGTC 9 cut(s) 164, 492, 731, 951, 1175, 1235, 1255, 1691, 2519
MmeI TCCRAC 5 cut(s) 382, 390, 1108, 1229, 1959
Mox20I TGGCCA 2 cut(s) 1025, 1997
Mph1103I ATGCAT 1 cut(s) 2349
MroNI GCCGGC 2 cut(s) 392, 2182
MscI TGGCCA 2 cut(s) 1025, 1997
MseI TTAA 5 cut(s) 942, 1146, 2235, 2408, 2601
MslI CAYNNNNRTG 4 cut(s) 719, 966, 1926, 2352
Msp20I TGGCCA 2 cut(s) 1025, 1997
MspR9I CCNGG 7 cut(s) 303, 350, 950, 1369, 2096, 2230, 2455
MunI CAATTG 1 cut(s) 186
MvaI CCWGG 2 cut(s) 950, 2230
MvnI CGCG 3 cut(s) 220, 1830, 1903
MwoI GCNNNNNNNGC 8 cut(s) 123, 132, 848, 1352, 1528, 1909, 2003, 2183
NaeI GCCGGC 2 cut(s) 394, 2184
NciI CCSGG 5 cut(s) 303, 350, 1369, 2096, 2455
NcoI CCATGG 1 cut(s) 2064
NgoMIV GCCGGC 2 cut(s) 392, 2182
NlaIV GGNNCC 7 cut(s) 451, 694, 1264, 1633, 1822, 1823, 2536
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 7 cut(s) 61, 382, 427, 1686, 1739, 1772, 2551
NsiI ATGCAT 1 cut(s) 2349
NspI RCATGY 1 cut(s) 2244
OliI CACNNNNGTG 1 cut(s) 1926
PaeR7I CTCGAG 2 cut(s) 500, 1243
PciI ACATGT 1 cut(s) 2240
PciSI GCTCTTC 1 cut(s) 1955
PcsI WCGNNNNNNNCGW 1 cut(s) 1749
PdiI GCCGGC 2 cut(s) 394, 2184
PfeI GAWTC 8 cut(s) 549, 607, 675, 977, 1081, 1252, 1586, 2594
Pfl23II CGTACG 1 cut(s) 531
PinAI ACCGGT 2 cut(s) 726, 863
PkrI GCNGC 5 cut(s) 391, 1345, 1567, 1900, 2227
Ple19I CGATCG 2 cut(s) 224, 1007
PleI GAGTC 9 cut(s) 164, 492, 731, 951, 1175, 1235, 1254, 1690, 2519
PpsI GAGTC 9 cut(s) 164, 492, 731, 951, 1175, 1235, 1254, 1690, 2519
PpuMI RGGWCCY 1 cut(s) 1821
PscI ACATGT 1 cut(s) 2240
PshAI GACNNNNGTC 1 cut(s) 1245
Psp124BI GAGCTC 2 cut(s) 137, 813
Psp1406I AACGTT 1 cut(s) 1593
Psp5II RGGWCCY 1 cut(s) 1821
Psp6I CCWGG 2 cut(s) 948, 2228
PspEI GGTNACC 1 cut(s) 2551
PspGI CCWGG 2 cut(s) 948, 2228
PspLI CGTACG 1 cut(s) 531
PspN4I GGNNCC 7 cut(s) 451, 694, 1264, 1633, 1822, 1823, 2536
PspPI GGNCC 3 cut(s) 450, 1262, 1821
PspPPI RGGWCCY 1 cut(s) 1821
PspXI VCTCGAGB 1 cut(s) 1243
PsuI RGATCY 2 cut(s) 931, 2631
PvuI CGATCG 2 cut(s) 224, 1007
RseI CAYNNNNRTG 4 cut(s) 719, 966, 1926, 2352
SacI GAGCTC 2 cut(s) 137, 813
SalI GTCGAC 1 cut(s) 92
SapI GCTCTTC 1 cut(s) 1955
SaqAI TTAA 5 cut(s) 942, 1146, 2235, 2408, 2601
SatI GCNGC 5 cut(s) 390, 1344, 1566, 1899, 2226
Sau96I GGNCC 3 cut(s) 450, 1262, 1821
ScaI AGTACT 2 cut(s) 1161, 2102
SchI GAGTC 9 cut(s) 164, 492, 731, 951, 1175, 1235, 1255, 1691, 2519
ScrFI CCNGG 7 cut(s) 303, 350, 950, 1369, 2096, 2230, 2455
SduI GDGCHC 4 cut(s) 137, 813, 1967, 2033
SexAI ACCWGGT 1 cut(s) 948
SfaNI GCATC 5 cut(s) 202, 206, 517, 1215, 2488
SfcI CTRYAG 2 cut(s) 1172, 1432
Sfr274I CTCGAG 2 cut(s) 500, 1243
SinI GGWCC 3 cut(s) 450, 1262, 1821
SlaI CTCGAG 2 cut(s) 500, 1243
SmiMI CAYNNNNRTG 4 cut(s) 719, 966, 1926, 2352
SmlI CTYRAG 4 cut(s) 500, 1243, 1438, 1700
SmoI CTYRAG 4 cut(s) 500, 1243, 1438, 1700
SpeI ACTAGT 1 cut(s) 2561
SspI AATATT 1 cut(s) 985
SspMI CTAG 6 cut(s) 1157, 1220, 2178, 2222, 2562, 2589
SstI GAGCTC 2 cut(s) 137, 813
StyD4I CCNGG 7 cut(s) 301, 348, 948, 1367, 2094, 2228, 2453
StyI CCWWGG 5 cut(s) 601, 1425, 1865, 1998, 2064
TaiI ACGT 7 cut(s) 684, 1104, 1505, 1596, 1623, 1746, 1959
TaqII GACCGA 1 cut(s) 858
TatI WGTACW 5 cut(s) 800, 1159, 1623, 2100, 2139
TauI GCSGC 3 cut(s) 392, 1568, 1901
TfiI GAWTC 8 cut(s) 549, 607, 675, 977, 1081, 1252, 1586, 2594
Tru1I TTAA 5 cut(s) 942, 1146, 2235, 2408, 2601
Tru9I TTAA 5 cut(s) 942, 1146, 2235, 2408, 2601
TscAI CASTG 3 cut(s) 1930, 2455, 2487
TseFI GTSAC 7 cut(s) 61, 382, 427, 1686, 1739, 1772, 2551
TseI GCWGC 2 cut(s) 1343, 2225
Tsp45I GTSAC 7 cut(s) 61, 382, 427, 1686, 1739, 1772, 2551
TspGWI ACGGA 8 cut(s) 370, 415, 561, 1011, 1727, 1727, 2183, 2268
TspRI CASTG 3 cut(s) 1930, 2455, 2487
VpaK11BI GGWCC 3 cut(s) 450, 1262, 1821
XapI RAATTY 6 cut(s) 176, 275, 311, 467, 776, 2281
XceI RCATGY 1 cut(s) 2244
XcmI CCANNNNNNNNNTGG 1 cut(s) 1863
XhoI CTCGAG 2 cut(s) 500, 1243
XmiI GTMKAC 3 cut(s) 93, 1187, 1331
XspI CTAG 6 cut(s) 1157, 1220, 2178, 2222, 2562, 2589
ZrmI AGTACT 2 cut(s) 1161, 2102
Zsp2I ATGCAT 1 cut(s) 2349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.